View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3687_high_57 (Length: 249)
Name: NF3687_high_57
Description: NF3687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3687_high_57 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 34826733 - 34826497
Alignment:
| Q |
13 |
aggtcctcgtaaaggtgaaactcttcaatttcgaccgggatatgccatcagaattggacgtgtcgtctgcggcaacaaccttccaattaaggatcccgga |
112 |
Q |
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| T |
34826733 |
aggtcctcgtaaaggtgaaactcttcaatttcgaccgggatatgccatcagaattggacgtgtcgtctgcggcaacaacctgccaattaaggatcccgga |
34826634 |
T |
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| Q |
113 |
atatccactaaacatctctctattcataccgaatccggtaaatgggcactcagagaccttgtttcctcatcaaatgcaacttctttggacgatgcggtca |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
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| T |
34826633 |
atatccactaaacatctctctattcataccgaatccggtaaatgggcactcagagaccttgattcctcatcaaatggaacttctttggacgatgcggtca |
34826534 |
T |
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| Q |
213 |
ttcctccaaatacttctttttatctccgtgatggatc |
249 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
34826533 |
ttcctccaaatacttctttttatctccgtgatggatc |
34826497 |
T |
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