View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3687_high_60 (Length: 246)
Name: NF3687_high_60
Description: NF3687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3687_high_60 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 21 - 246
Target Start/End: Original strand, 155597 - 155823
Alignment:
| Q |
21 |
ggactcaggcatttgctagttgtgcctaagaaaccaggagtaagtaaa-tactcttacttttatttatttgtgttgttgttaattagagttgaatgatga |
119 |
Q |
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| T |
155597 |
ggactcaggcatttgctagttgtgcctaagaaaccaggagtaagtaaaatactcttacttttatttatttgtgttgttgttaattagagttgaatgatga |
155696 |
T |
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| Q |
120 |
attacctttattattataactaatatttgtaaatgttaaacattgtgcagaggcctccaattgttgggatactgacaaggcatgatttcatgcacgacta |
219 |
Q |
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| T |
155697 |
attacctttattattataactaatatttgtaaatgttaaacaatgtgcagaggcctccaattgttgggatactgacaaggcatgatttcatgcacgacta |
155796 |
T |
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| Q |
220 |
tatcttgggcctgttcccaaacttgaa |
246 |
Q |
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|||||||||||| |||||||||||||| |
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| T |
155797 |
tatcttgggcctattcccaaacttgaa |
155823 |
T |
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