View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3687_high_81 (Length: 231)
Name: NF3687_high_81
Description: NF3687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3687_high_81 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 11241663 - 11241874
Alignment:
| Q |
5 |
gttgagatggtaaccacagtgactgcagacaccttaaaatctatttctaacatgtcaaattccaacataaatccattcctgtatcataattactagtaat |
104 |
Q |
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| T |
11241663 |
gttgagatggtaaccgcagtcactgtagacaccttaaaatctatttctaacatgtcaaattccaacataaatccattcctatatcataattaatagtaat |
11241762 |
T |
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| Q |
105 |
tttttgggtgatagttcttttacgagcatcttcaatgggcataatttaagtaactcattccggataatttatcttttaattagtgagtttcattgtgtca |
204 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
11241763 |
tttttgggtgatagttcttttacgagcatcttcaatgggcataatttaagtaactcattccggataatttatcttttaattagtgagtttcattgtgcca |
11241862 |
T |
|
| Q |
205 |
taccatatttat |
216 |
Q |
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|||||||||||| |
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| T |
11241863 |
taccatatttat |
11241874 |
T |
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