View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3687_low_50 (Length: 251)
Name: NF3687_low_50
Description: NF3687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3687_low_50 |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 32572630 - 32572871
Alignment:
| Q |
1 |
tagaggctgagctttttctttgttgttgcaactgtttgtggattcactttcacaatcagctagggcttgtgatgttaagaaagtgattaagatgaaaaca |
100 |
Q |
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| T |
32572630 |
tagaggctgagccttttctttgttgttgcaactgtttgtggattcactttcacaatcagctagggcttgtgatgttaaaaaagtgattaagatgaaaaca |
32572729 |
T |
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| Q |
101 |
atgaagattgctttgtgtacagttactgaataagtcattatttgaggttttctagcctgtaattatgctaactgagctatcttgtgttggttttgattga |
200 |
Q |
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||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32572730 |
atgaagattgctttgtgtatagttactgaataagccattatttgatgttttctagcctgtaattatgctaactgagctatcttgtgttggttttgattga |
32572829 |
T |
|
| Q |
201 |
gtaattaatcttcattataatttatatatatagacctttgct |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
32572830 |
gtaattaatcttcattataatttatatatatagacctttgct |
32572871 |
T |
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