View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3693_high_39 (Length: 285)
Name: NF3693_high_39
Description: NF3693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3693_high_39 |
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Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 9166128 - 9165868
Alignment:
| Q |
1 |
acttttggttagtttcatgcagggaacaannnnnnnaccatatacattataaaactgctaataggacaatctgagaacacattgtttaaaagttgtctaa |
100 |
Q |
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| T |
9166128 |
acttttggttagtttcatgcagggaacaatttttttaccatatacatcataaaactgctaataggacaatctgagaacatattgtttaaaagttatctaa |
9166029 |
T |
|
| Q |
101 |
cacaaaaatctgttaaaagtgaaagaccgataagctcgcaagacttgagtagagcttggataaggataacccgtgagttatagcatctaagtacaatgtg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9166028 |
cacaaaaatctgttaaaagtgaaagaccgataagctcgcaagacttgagtagagcttggataaggataacccgtgagttatagcatctaagtacaatgtg |
9165929 |
T |
|
| Q |
201 |
ctgattttgtag-acaactaattagcttgactataccgttgattctctctttctctctctc |
260 |
Q |
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||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
9165928 |
ctgatttcgtagcacaactaattagcttgactataccgttgattctctctctctctctctc |
9165868 |
T |
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