View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3693_high_41 (Length: 283)
Name: NF3693_high_41
Description: NF3693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3693_high_41 |
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Alignment Details
Target: chr5 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 2592034 - 2592305
Alignment:
| Q |
1 |
ccaccattgatagagaataatgtggaaaacagcatggtgccaattgatcaagtgcaatcttgtaatatggatgaggaaggaggagagttattaacattgg |
100 |
Q |
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| T |
2592034 |
ccaccattgatagagaataatgtggaaaacagcatggtgccaattgatcaagtgcaatcttgtaatatggatgaggaaggaggagagttattaacattgg |
2592133 |
T |
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| Q |
101 |
agtcattgcaattgcaaagacaagaagagttgaatgaatgggtggaaactcaacaacaatgtcctagctttattttcagctgggagagtgttgaaggaca |
200 |
Q |
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| T |
2592134 |
agtcattgcaattgcaaagacaagaagagttgaatgaatgggtggaaactcaacaacaatgtcctagctttattttcagctgggagagtgttgaaggaca |
2592233 |
T |
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| Q |
201 |
aattggaggtgaagaacaagtactagtaccaaactcatcacatatgggaacacctaattcactttctccttt |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2592234 |
aattggaggtgaagaacaagtactagtaccaaactcatcacatatgggaacacctaattcactttctccttt |
2592305 |
T |
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