View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3693_high_45 (Length: 268)
Name: NF3693_high_45
Description: NF3693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3693_high_45 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 7140441 - 7140201
Alignment:
| Q |
1 |
tagccaccgagggtttcttcgtcgtggttattattatcttgttcctcaattcatttccattctcactacctacaacacaatcctacatcgccaaacccta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
7140441 |
tagccaccgagggtttcttcgtcgtggttattattatcttgttcatcaattcatttccattctcactacctacaacacaatccttcatcgccaaacccta |
7140342 |
T |
|
| Q |
101 |
aaacggtaccgttttagcgcgcgcagaagcagaaagtgttcctctagtttcagaggttcactggtcacacaccatggctctctcaatcggaaagctcacc |
200 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7140341 |
aaacggtaccgttttagcgcgcgcagaagctgaaagtgttcctctagtttcagaggttcactggtcacacaccatggctctctcaatcggaaagctcacc |
7140242 |
T |
|
| Q |
201 |
attctcctcggcgcaggtacactctctcttcttcaccttcg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
7140241 |
attctcctcggcgcaggtacactctctcttcttcaccttcg |
7140201 |
T |
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