View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3693_high_50 (Length: 250)
Name: NF3693_high_50
Description: NF3693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3693_high_50 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 36053239 - 36053015
Alignment:
| Q |
1 |
accttaatttcttttataacacttaacagcatgtctattagcaggaatgttatgaagccagcacgattagaattggtatttttaaaaacaatactttttc |
100 |
Q |
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| T |
36053239 |
accttaatttcttttataacacttaacagcatgtctattagcaggaatgttatgaagccggcacgattagaattggtatttttaaaaacaatactttttc |
36053140 |
T |
|
| Q |
101 |
tactccctatatataaaggtccacttgggaattggccgggaattaaaacttgaatttaaaaagtgttaagaagttgcaaattgatgaaaatctttcatgg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36053139 |
tactccctatatataaaggtccacttgggaattggccgggaattaaaacttcaatttaaaaagtgttaagaagttgcaaattgatgaaaatctttcatgg |
36053040 |
T |
|
| Q |
201 |
tcaactctttctcttgagtgaatga |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
36053039 |
tcaactctttctcttgagtgaatga |
36053015 |
T |
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