View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3693_high_51 (Length: 250)
Name: NF3693_high_51
Description: NF3693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3693_high_51 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 46847930 - 46848171
Alignment:
| Q |
1 |
aatgcatacttctaaatacccgttccgccgcctcaatgcacccacattttgcatacatgtcaatgagacttgtccaaagagaagcattgctactgttctt |
100 |
Q |
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| T |
46847930 |
aatgcatacttctaaatacccgttccgccgcctcaatgcacccacattttgcatacatgtcaatgagacttgtccaaagagaagcattgctgctgttcct |
46848029 |
T |
|
| Q |
101 |
caagttcttatctatgtaagcatgaacccacttaccaaggtcaagagcaccaaggcaagcacaagcatgaagaatgcccaagaaggtaacatcatcaggc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
46848030 |
caagttcttatctatgtaagcatgaacccacttaccaaggtcaagagcaccaaggcaagcacaagcatgaagaatgcccaagaaggtaacatcattaggc |
46848129 |
T |
|
| Q |
201 |
tttacattcgacctaagcatgacctcaaacaatgcctatgct |
242 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||| |
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| T |
46848130 |
tttacattcgacctaagcatgacctcaaacaatgccaatgct |
46848171 |
T |
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