View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3693_high_61 (Length: 235)
Name: NF3693_high_61
Description: NF3693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3693_high_61 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 45222611 - 45222392
Alignment:
| Q |
1 |
taggtattcgactcaatgattgactaatcagatgagttcaatcttattgttcacttgtaggagccccaattaaagtaaagtaagatcaaggttttgtatg |
100 |
Q |
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|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45222611 |
taggtattcgactcaatgattgactaatttgatgagttcaattttattgttcacttgtaggagccccaattaaagtaaagtaagatcaaggttttgtatg |
45222512 |
T |
|
| Q |
101 |
gactaactcatcgaaattgataccggataaattaaatttgagaggaacacacttcaaggtctcaagtcaacaccactcttttttacttaaatttaaactt |
200 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
45222511 |
gactaactcatcgaaattgacatcggataaattaaacttgagaggaacacactttaaggtctcaagtcaacaccactattttttacttaaatttaaactt |
45222412 |
T |
|
| Q |
201 |
ggaaaagaattgtgtggtta |
220 |
Q |
| |
|
|||||||||||||||||||| |
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| T |
45222411 |
ggaaaagaattgtgtggtta |
45222392 |
T |
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