View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3693_low_60 (Length: 238)
Name: NF3693_low_60
Description: NF3693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3693_low_60 |
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Alignment Details
Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 31922826 - 31923007
Alignment:
| Q |
17 |
aaatacattattttcaacaaaatctagtcctatgcacgtccttcaagtaaagattaagcatttccttnnnnnnnncacaatagaagaactgaacgtgctt |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |
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| T |
31922826 |
aaatacattattttcaacaaaatctagtcctatgcacgtccttcaagtaaagattaagcatttcct-aaaaaaaacaaaatagaagaactgaacgtgctt |
31922924 |
T |
|
| Q |
117 |
ctttcaactaagctgagagttctacgccatgtccatgtgatttatgtctcgtttcttgagcttcagattcattagtcagatac |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31922925 |
ctttcaactaagctgagagttctacgccatgtccatgtgatttatgtctcgtttcttgagcttcagattcattagtcagatac |
31923007 |
T |
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