View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3693_low_72 (Length: 208)

Name: NF3693_low_72
Description: NF3693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3693_low_72
NF3693_low_72
[»] chr4 (23 HSPs)
chr4 (1-192)||(11701678-11701869)
chr4 (1-100)||(11797814-11797913)
chr4 (1-97)||(11675880-11675976)
chr4 (1-97)||(11684159-11684255)
chr4 (1-89)||(11695984-11696072)
chr4 (131-180)||(29517841-29517890)
chr4 (134-178)||(39263632-39263676)
chr4 (134-185)||(572173-572224)
chr4 (122-180)||(54110490-54110549)
chr4 (134-180)||(865421-865467)
chr4 (134-180)||(866279-866325)
chr4 (134-180)||(29145244-29145290)
chr4 (134-180)||(42712141-42712187)
chr4 (146-180)||(6711121-6711155)
chr4 (134-180)||(9170695-9170741)
chr4 (134-180)||(29144856-29144902)
chr4 (134-176)||(48615231-48615273)
chr4 (134-176)||(54109504-54109546)
chr4 (134-179)||(6056415-6056460)
chr4 (134-179)||(48614230-48614275)
chr4 (1-69)||(11778983-11779051)
chr4 (134-178)||(24573734-24573778)
chr4 (144-180)||(53535606-53535642)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-102)||(16413-16514)
[»] chr8 (16 HSPs)
chr8 (134-180)||(7601716-7601762)
chr8 (134-180)||(40784812-40784858)
chr8 (134-180)||(42093432-42093478)
chr8 (134-180)||(11596580-11596626)
chr8 (134-192)||(41723214-41723272)
chr8 (134-176)||(14446061-14446103)
chr8 (134-180)||(30427086-30427132)
chr8 (135-178)||(40575870-40575913)
chr8 (134-180)||(15224757-15224803)
chr8 (144-178)||(35627058-35627092)
chr8 (134-192)||(36187177-36187235)
chr8 (134-180)||(37727107-37727153)
chr8 (146-180)||(39529570-39529604)
chr8 (134-175)||(30136730-30136771)
chr8 (144-193)||(37727877-37727926)
chr8 (143-192)||(40142465-40142514)
[»] chr5 (13 HSPs)
chr5 (134-180)||(16899915-16899961)
chr5 (134-180)||(6895207-6895253)
chr5 (134-192)||(31559031-31559089)
chr5 (134-180)||(40366265-40366311)
chr5 (134-180)||(3099096-3099142)
chr5 (134-180)||(39084321-39084367)
chr5 (134-179)||(3098310-3098355)
chr5 (134-179)||(32694780-32694825)
chr5 (134-182)||(31558244-31558292)
chr5 (134-180)||(6894356-6894402)
chr5 (134-180)||(19432550-19432596)
chr5 (118-175)||(29096816-29096874)
chr5 (134-180)||(38914283-38914329)
[»] chr3 (16 HSPs)
chr3 (134-180)||(54280858-54280904)
chr3 (134-180)||(21103611-21103657)
chr3 (134-192)||(31090679-31090737)
chr3 (134-192)||(42121733-42121791)
chr3 (134-192)||(41780390-41780448)
chr3 (121-178)||(43631220-43631278)
chr3 (134-180)||(43656221-43656267)
chr3 (134-180)||(54295103-54295149)
chr3 (129-192)||(34985099-34985162)
chr3 (121-180)||(44707557-44707616)
chr3 (134-180)||(42489287-42489333)
chr3 (134-180)||(51218110-51218156)
chr3 (134-179)||(42488457-42488502)
chr3 (144-180)||(15951522-15951558)
chr3 (134-178)||(43655345-43655389)
chr3 (134-174)||(53427978-53428018)
[»] chr2 (17 HSPs)
chr2 (134-192)||(39233926-39233984)
chr2 (134-192)||(44075841-44075899)
chr2 (134-192)||(2075679-2075737)
chr2 (134-180)||(2215046-2215092)
chr2 (134-180)||(3834932-3834978)
chr2 (134-180)||(18234196-18234242)
chr2 (131-180)||(2076415-2076464)
chr2 (134-180)||(5429804-5429850)
chr2 (131-180)||(25455792-25455841)
chr2 (134-176)||(914385-914427)
chr2 (134-180)||(5429055-5429101)
chr2 (134-180)||(8873691-8873737)
chr2 (134-180)||(16011371-16011417)
chr2 (134-192)||(28783812-28783870)
chr2 (134-180)||(28784824-28784870)
chr2 (134-176)||(35907371-35907413)
chr2 (134-192)||(39475410-39475468)
[»] chr1 (13 HSPs)
chr1 (134-180)||(39841274-39841320)
chr1 (134-179)||(43380545-43380590)
chr1 (134-180)||(51465757-51465803)
chr1 (134-179)||(29373965-29374010)
chr1 (134-178)||(41147287-41147331)
chr1 (134-180)||(171447-171493)
chr1 (134-180)||(1743212-1743258)
chr1 (134-180)||(16878751-16878797)
chr1 (134-180)||(46728723-46728769)
chr1 (135-180)||(39025382-39025427)
chr1 (134-178)||(1744028-1744072)
chr1 (144-180)||(23551686-23551722)
chr1 (134-178)||(30856906-30856950)
[»] chr6 (4 HSPs)
chr6 (135-180)||(3184691-3184736)
chr6 (134-180)||(544345-544391)
chr6 (134-176)||(1175114-1175156)
chr6 (146-180)||(32403993-32404027)
[»] chr7 (13 HSPs)
chr7 (134-193)||(37796603-37796662)
chr7 (134-180)||(41345438-41345484)
chr7 (134-193)||(26828771-26828830)
chr7 (134-180)||(14419395-14419441)
chr7 (134-180)||(21985585-21985631)
chr7 (134-180)||(47723485-47723531)
chr7 (134-174)||(26829629-26829669)
chr7 (134-180)||(6822610-6822656)
chr7 (134-179)||(46196746-46196791)
chr7 (144-180)||(7945349-7945385)
chr7 (144-180)||(11337718-11337754)
chr7 (144-180)||(21984874-21984910)
chr7 (134-178)||(40193866-40193910)
[»] scaffold0100 (1 HSPs)
scaffold0100 (147-192)||(35262-35307)


Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-100; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 11701869 - 11701678
Alignment:
Q  1 gttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatttaaattctcat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11701869 gttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatttaaattctcat 11701770  T
Q  101 caccatttaaaaaagaaaatataaagaaggtttaatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11701769 caccatttaaaaaagaaaatataaagaaggtttaatattataatcgtccctgtaatttggaccagttttgattttcgtccatgtagaaaaaa 11701678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 11797913 - 11797814
Alignment:
Q  1 gttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatttaaattctcat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  11797913 gttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataattcatttcaattctcat 11797814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 11675976 - 11675880
Alignment:
Q  1 gttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatttaaattct 97  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||  ||||| ||||||    
T  11675976 gttagatatgatatcaagttcccttgaatcccataatatgataccctctctgccacttccacacctatacaaaacattcataactcatttcaattct 11675880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 11684255 - 11684159
Alignment:
Q  1 gttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatttaaattct 97  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||  ||||| ||||||    
T  11684255 gttagatatgatatcaagttcccttgaatcccataatatgataccctctctgccacttccacacctatacaaaacattcataactcatttcaattct 11684159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11696072 - 11695984
Alignment:
Q  1 gttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatt 89  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||| ||| ||||    
T  11696072 gttagatatgatatcaaattcccttgaattccataatatgatgccctctctgccatttccacacctaaatataacattcacaattcatt 11695984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 29517890 - 29517841
Alignment:
Q  131 tttaatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||    
T  29517890 tttaatatgataatcgtccctgtaatttggttcaattttgattttcgtcc 29517841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 39263632 - 39263676
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 178  Q
    ||||||||  |||||||||||||||||||||||||||||||||||    
T  39263632 aatatgattttcgtccctgtaatttggaccagttttgattttcgt 39263676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 572224 - 572173
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatata 185  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||| ||||    
T  572224 aatatgataattgtccctataatttggtccagttttgattttcgtccctata 572173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 54110549 - 54110490
Alignment:
Q  122 taaagaaggtttaa-tatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||| ||||||||| ||||||||||||||||||||||||   ||||||||||||||||||    
T  54110549 taaaaaaggtttaaatatgataatcgtccctgtaatttgtttcagttttgattttcgtcc 54110490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 865421 - 865467
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||    
T  865421 aatatgataatcatccctgtaatttgggtcagttttgattttcgtcc 865467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 866325 - 866279
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||    
T  866325 aatatgataatcgtccctgtaatttagtctagttttgattttcgtcc 866279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 29145290 - 29145244
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||    
T  29145290 aatatgataatcgtccctgtaatttggtcaaattttgattttcgtcc 29145244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 42712187 - 42712141
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  42712187 aatatgatagtcgtccttgtaatttggaccagttttgatttttgtcc 42712141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 6711155 - 6711121
Alignment:
Q  146 gtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||||||||||||| ||||||||    
T  6711155 gtccctgtaatttggaccagttttgaatttcgtcc 6711121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 9170741 - 9170695
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||| | |||| ||||| |||||||||||||||||||    
T  9170741 aatatgataatcgttcttgtattttggtccagttttgattttcgtcc 9170695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 29144902 - 29144856
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||||||||||||  | | |||||||||||||||    
T  29144902 aatatgataatcgtccctgtaatttgatcaaattttgattttcgtcc 29144856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 48615273 - 48615231
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttc 176  Q
    ||||||||| |||||| |||||||||||| |||||||||||||    
T  48615273 aatatgatattcgtccatgtaatttggacgagttttgattttc 48615231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 54109504 - 54109546
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttc 176  Q
    |||||||||||||||||||||||||   |||||||||||||||    
T  54109504 aatatgataatcgtccctgtaatttactccagttttgattttc 54109546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 6056415 - 6056460
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 179  Q
    |||||||||||||||||| |||||| |  |||||||||||||||||    
T  6056415 aatatgataatcgtccctataatttagggcagttttgattttcgtc 6056460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 48614230 - 48614275
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 179  Q
    |||||||||||||||| ||||| |||| |||||||| |||||||||    
T  48614230 aatatgataatcgtccgtgtaaattggtccagttttaattttcgtc 48614275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11779051 - 11778983
Alignment:
Q  1 gttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaa 69  Q
    ||||||||||||||||| || || | ||  ||| ||||||| | |||||||||||| ||||||||||||    
T  11779051 gttagatatgatatcaagtttcccttaaccccaaaatatgacatcctctctgccacctccacacctaaa 11778983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 24573734 - 24573778
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 178  Q
    ||||||||||  ||| ||||||||||| |||||||||||||||||    
T  24573734 aatatgataactgtctctgtaatttggtccagttttgattttcgt 24573778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 53535642 - 53535606
Alignment:
Q  144 tcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||| || ||||||||||||||||    
T  53535642 tcgtccctgtaatttgggcccgttttgattttcgtcc 53535606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 16514 - 16413
Alignment:
Q  1 gttagatatgatatcaaattcccttgaattccataatatgataccctctctgccacttccacacctaaacataacattcataatccatttaaattctcat 100  Q
    ||||||||||||||||| || || | ||| |||  |||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  16514 gttagatatgatatcaagtttcccttaatcccaatatatgatatcctctctgctacttccacacctaaacataacattcataatccatttcaattctcat 16415  T
Q  101 ca 102  Q
    ||    
T  16414 ca 16413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 7601762 - 7601716
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  7601762 aatatgataatcgtccctgtaatttgggccagttttgattttcgtcc 7601716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 40784812 - 40784858
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  40784812 aatatgataatcgtccctgtaatttggtccagttttgattttcgtcc 40784858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 42093432 - 42093478
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  42093432 aatatgataatcgtccctgtaatttgaaccagttttgattttcgtcc 42093478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 11596626 - 11596580
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  11596626 aatatgagaatcgtcccagtaatttggaccagttttgattttcgtcc 11596580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 41723214 - 41723272
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    ||||||||||||||||||||||||||| | ||||||||||| ||||| |||| ||||||    
T  41723214 aatatgataatcgtccctgtaatttggtcaagttttgatttccgtccctataaaaaaaa 41723272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 14446103 - 14446061
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttc 176  Q
    ||||||||||||||||||||||||||| ||| |||||||||||    
T  14446103 aatatgataatcgtccctgtaatttgggccaattttgattttc 14446061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 30427086 - 30427132
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||    
T  30427086 aatatgataatcgtccctgtaatttggttcagtttttattttcgtcc 30427132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 40575913 - 40575870
Alignment:
Q  135 atatgataatcgtccctgtaatttggaccagttttgattttcgt 178  Q
    |||||||||||||| || ||||||||||||||| ||||||||||    
T  40575913 atatgataatcgtctctataatttggaccagttatgattttcgt 40575870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 15224757 - 15224803
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||  ||||||||||||||||| || ||||||||||||||||    
T  15224757 aatatgattttcgtccctgtaatttgggcccgttttgattttcgtcc 15224803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 35627092 - 35627058
Alignment:
Q  144 tcgtccctgtaatttggaccagttttgattttcgt 178  Q
    |||||||||||||||||| ||||||||||||||||    
T  35627092 tcgtccctgtaatttggatcagttttgattttcgt 35627058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 36187235 - 36187177
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    ||||||||  ||||||||||||||| || |||||||||||||| ||| |||| ||||||    
T  36187235 aatatgattttcgtccctgtaatttagatcagttttgattttcatccctataaaaaaaa 36187177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 37727107 - 37727153
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||  |||||| |||||||| |||||||||||||||||||||    
T  37727107 aatatgattttcgtccatgtaatttagaccagttttgattttcgtcc 37727153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 39529604 - 39529570
Alignment:
Q  146 gtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||| ||||||||||||||||||    
T  39529604 gtccctgtaatttggatcagttttgattttcgtcc 39529570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 30136771 - 30136730
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgatttt 175  Q
    |||||||||||||||| ||||||||| |||| ||||||||||    
T  30136771 aatatgataatcgtccatgtaatttgaaccaattttgatttt 30136730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 37727926 - 37727877
Alignment:
Q  144 tcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaat 193  Q
    |||||||||||||||||  |||||||||||||||| ||| || |||||||    
T  37727926 tcgtccctgtaatttgggtcagttttgattttcgttcatgtaaaaaaaat 37727877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 40142465 - 40142514
Alignment:
Q  143 atcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    ||||||||| ||||||||  |||||||||||||||| |||||| ||||||    
T  40142465 atcgtccctttaatttgggtcagttttgattttcgtacatataaaaaaaa 40142514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 16899915 - 16899961
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  16899915 aatatgataatcgtccctgtaatttggtccagttttgattttcgtcc 16899961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 6895253 - 6895207
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||    
T  6895253 aatatgataatcgtccttgtaatttggtccagttttgattttcgtcc 6895207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 31559089 - 31559031
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||||| |||| ||||||    
T  31559089 aatatgataatcgtcactgtaattttggccagttttgattttcgtccctataaaaaaaa 31559031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 40366265 - 40366311
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  40366265 aatatgataatcgtccctgtaatttgggtcagttttgattttcgtcc 40366311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 3099142 - 3099096
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||| |||||||||| |||||||| ||||||||||    
T  3099142 aatatgataatcgtccatgtaatttggtccagttttaattttcgtcc 3099096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 39084367 - 39084321
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||||| |||||||| ||| |||||||||||||||    
T  39084367 aatatgataatcgtccctctaatttgggccaattttgattttcgtcc 39084321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 3098310 - 3098355
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 179  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||    
T  3098310 aatatgataatcgtccctgtaatttaggtcagttttgattttcgtc 3098355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 32694825 - 32694780
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 179  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  32694825 aatatgataatcgcccctgtagtttgggccagttttgattttcgtc 32694780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 31558244 - 31558292
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccat 182  Q
    ||||||||||||||| ||||||||||   ||||||||||||||||||||    
T  31558244 aatatgataatcgtcactgtaatttgagtcagttttgattttcgtccat 31558292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 6894356 - 6894402
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||| ||||| |||||| | |||||||||||||||||||    
T  6894356 aatatgataatcatccctctaatttaggccagttttgattttcgtcc 6894402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 19432596 - 19432550
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||| ||||||||||||  ||||||||||||| ||||    
T  19432596 aatatgataatcgttcctgtaatttggttcagttttgatttttgtcc 19432550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 29096816 - 29096874
Alignment:
Q  118 aatataaagaaggtttaa-tatgataatcgtccctgtaatttggaccagttttgatttt 175  Q
    |||||||  ||||||||| ||||| |||||||| |||||||||| ||||||||||||||    
T  29096816 aatataagaaaggtttaaatatgaaaatcgtccatgtaatttggtccagttttgatttt 29096874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 38914329 - 38914283
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||  |||||||| |||||| |||||||||||||||||||||    
T  38914329 aatatgattttcgtccctataatttagaccagttttgattttcgtcc 38914283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 54280858 - 54280904
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  54280858 aatatgataatcgtccctgtaatttggtccagttttgattttcgtcc 54280904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 21103657 - 21103611
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||    
T  21103657 aatatgattttcgtccctgtaatttggaccagttttgattttcgtcc 21103611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 31090679 - 31090737
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    ||||||||  |||||||||||||||||||| |||||||||||||||| |||| ||||||    
T  31090679 aatatgattttcgtccctgtaatttggacccgttttgattttcgtccctataaaaaaaa 31090737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 42121791 - 42121733
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||| || ||||||    
T  42121791 aatatgataatcgtccctataatttggaccagttttaattttcgttcatgtaaaaaaaa 42121733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 41780448 - 41780390
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    ||||||||  |||||||||||||||||||| ||||||||||| |||| | |||||||||    
T  41780448 aatatgattttcgtccctgtaatttggacccgttttgatttttgtccctgtagaaaaaa 41780390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 43631278 - 43631220
Alignment:
Q  121 ataaagaaggtttaa-tatgataatcgtccctgtaatttggaccagttttgattttcgt 178  Q
    |||||||||| |||| |||||||||||||| ||| |||||| |||||||||||||||||    
T  43631278 ataaagaaggcttaaatatgataatcgtccatgtgatttggtccagttttgattttcgt 43631220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 43656267 - 43656221
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||    
T  43656267 aatatgataatcgtccttgtaatttgggacagttttgattttcgtcc 43656221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 54295149 - 54295103
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||    
T  54295149 aatatgataatcgtccatgtaatttgggtcagttttgattttcgtcc 54295103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 34985099 - 34985162
Alignment:
Q  129 ggtttaatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    |||| ||||| |||||||||  |||||||||| ||| ||||||||||||||||| || ||||||    
T  34985099 ggttaaatataataatcgtctgtgtaatttggtccaattttgattttcgtccatgtaaaaaaaa 34985162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 44707616 - 44707557
Alignment:
Q  121 ataaagaaggtttaatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||| | || ||||||||  ||||||||||||||||||||  |||||||||||||||    
T  44707616 ataaagaggcttaaatatgattttcgtccctgtaatttggacccattttgattttcgtcc 44707557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 42489333 - 42489287
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||| |||| ||||||||||  ||||||||||||||||||    
T  42489333 aatatgataattgtccttgtaatttgggtcagttttgattttcgtcc 42489287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 51218110 - 51218156
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||| |||||| |||||||| ||||||||||| |||||||    
T  51218110 aatatgataattgtccctataatttggtccagttttgatattcgtcc 51218156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 42488457 - 42488502
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 179  Q
    |||||||||||| |||||||||||||   |||||||||||||||||    
T  42488457 aatatgataatcatccctgtaatttgagtcagttttgattttcgtc 42488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 15951558 - 15951522
Alignment:
Q  144 tcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||| || ||||||||||||||||    
T  15951558 tcgtccctgtaatttgggcccgttttgattttcgtcc 15951522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 43655345 - 43655389
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 178  Q
    |||||||||||| ||| | |||||||| |||||||||||||||||    
T  43655345 aatatgataatcatccatttaatttgggccagttttgattttcgt 43655389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 53428018 - 53427978
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattt 174  Q
    ||||||||||||||  ||||||||||| |||||||||||||    
T  53428018 aatatgataatcgtttctgtaatttggtccagttttgattt 53427978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 39233984 - 39233926
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||| ||||||    
T  39233984 aatatgataatcgtccctgtaatttggttcaattttgattttcgtccatataaaaaaaa 39233926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 44075841 - 44075899
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||||    
T  44075841 aatatgataatcgtccctgtaatttggtccagttttgattttcgtctctataaaaaaaa 44075899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 2075679 - 2075737
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||| |||| ||||||    
T  2075679 aatatgataatcgtccctgtaatttaggtcagttttgattttcgtccctataaaaaaaa 2075737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 2215092 - 2215046
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  2215092 aatataataatcgtccctgtaatttgggccagttttgattttcgtcc 2215046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 3834932 - 3834978
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  3834932 aatatgataatcgtccctgtaatttggtctagttttgattttcgtcc 3834978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 18234196 - 18234242
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  18234196 aatatgatattcgtctctgtaatttggaccagttttgattttcgtcc 18234242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 2076464 - 2076415
Alignment:
Q  131 tttaatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  2076464 tttaatatgataattgtccctataatttggtccagttttgattttcgtcc 2076415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 5429850 - 5429804
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||||| |||||||| ||| |||||||||||||||    
T  5429850 aatatgataatcgtccctataatttggtccaattttgattttcgtcc 5429804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 25455792 - 25455841
Alignment:
Q  131 tttaatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||||||| ||||||||| |||||| ||| ||||||||    
T  25455792 tttaatatgataatcgtccccgtaatttgggccagttatgaatttcgtcc 25455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 914385 - 914427
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttc 176  Q
    ||||||||||||||||||||||||| |  ||||||||||||||    
T  914385 aatatgataatcgtccctgtaatttaggtcagttttgattttc 914427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 5429055 - 5429101
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||| ||| |||||||||||||||  ||||||||||||||||||    
T  5429055 aatatgaaaattgtccctgtaatttggttcagttttgattttcgtcc 5429101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 8873691 - 8873737
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||  |||||||||||||||||||| ||||| ||||||||||    
T  8873691 aatatgattttcgtccctgtaatttggacccgttttaattttcgtcc 8873737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 16011371 - 16011417
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||| | |||||||| | |||||||||||||||||||    
T  16011371 aatatgataatcgttcttgtaatttagtccagttttgattttcgtcc 16011417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 28783812 - 28783870
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    |||||||||||||||| |||||||| | ||| |||| |||||||||||| || ||||||    
T  28783812 aatatgataatcgtccatgtaatttagtccaattttaattttcgtccatgtaaaaaaaa 28783870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 28784870 - 28784824
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||| ||||||||| ||||||||||| | |||||||||||||||||    
T  28784870 aatattataatcgtctctgtaatttggtcaagttttgattttcgtcc 28784824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 35907371 - 35907413
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttc 176  Q
    ||||||||||| ||||||||||||||| | |||||||||||||    
T  35907371 aatatgataattgtccctgtaatttggtctagttttgattttc 35907413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 39475410 - 39475468
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    ||||| ||||||||| ||||||||||  ||||||||||||||||| | | |||||||||    
T  39475410 aatataataatcgtctctgtaatttgatccagttttgattttcgttcctgtagaaaaaa 39475468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 39841320 - 39841274
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  39841320 aatatgataatcgtccctgtaatttggtccagttttgattttcgtcc 39841274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 43380590 - 43380545
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 179  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  43380590 aatatgataatcgtccctgtaatttggatcagttttgattttcgtc 43380545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 51465757 - 51465803
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  51465757 aatatgataatagtccctgtaatttggatcagttttgattttcgtcc 51465803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 29374010 - 29373965
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 179  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||    
T  29374010 aatatgataatcgtccttgtaatttggatcagttttgattttcgtc 29373965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 41147331 - 41147287
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 178  Q
    |||||||||||||||| |||||||||| |||||||||||||||||    
T  41147331 aatatgataatcgtccttgtaatttgggccagttttgattttcgt 41147287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 171493 - 171447
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||| ||||||||||   ||||||||||||||||||    
T  171493 aatatgataatcgtctctgtaatttgagtcagttttgattttcgtcc 171447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 1743212 - 1743258
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||||| |||||| |  ||||||||||||||||||    
T  1743212 aatatgataatcgtccctataatttagttcagttttgattttcgtcc 1743258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 16878751 - 16878797
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||  |||||||||||||||| ||| ||||||||||||||||    
T  16878751 aatatgattttcgtccctgtaatttgaacccgttttgattttcgtcc 16878797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 46728769 - 46728723
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||| ||||| |||||  ||||||||||||||||||    
T  46728769 aatatgataatcgtcactgtagtttgggtcagttttgattttcgtcc 46728723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 39025382 - 39025427
Alignment:
Q  135 atatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||  |||||||||||||| ||| |||||||||||||||    
T  39025382 atatgataattatccctgtaatttggtccaattttgattttcgtcc 39025427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 1744072 - 1744028
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 178  Q
    |||||||||||| ||  |||||||||| |||||||||||||||||    
T  1744072 aatatgataatcatctatgtaatttgggccagttttgattttcgt 1744028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 23551686 - 23551722
Alignment:
Q  144 tcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||||||  ||||||||||||||||    
T  23551686 tcgtccctgtaatttggacgcgttttgattttcgtcc 23551722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 30856950 - 30856906
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 178  Q
    |||||||||||| ||||| |||||||| | |||||||||||||||    
T  30856950 aatatgataatcttccctataatttggtctagttttgattttcgt 30856906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 3184691 - 3184736
Alignment:
Q  135 atatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  3184691 atatgataatcgtccctgtaatttggacaagttttgattttcgtcc 3184736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 544345 - 544391
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  544345 aatatgataatcgtctctgtaatttggtccagttttgattttcgtcc 544391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 1175156 - 1175114
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttc 176  Q
    ||||||||  |||||||||||||||||||| ||||||||||||    
T  1175156 aatatgattttcgtccctgtaatttggacccgttttgattttc 1175114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Original strand, 32403993 - 32404027
Alignment:
Q  146 gtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||||| |||||||||||||||    
T  32403993 gtccctgtaatttggaccacttttgattttcgtcc 32404027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 37796603 - 37796662
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaat 193  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| |||  |||||||    
T  37796603 aatatgataatcgtccctgtaatttgggtcagttttgattttcgtccctatgaaaaaaat 37796662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 41345484 - 41345438
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||    
T  41345484 aatatgataatcgtccctataatttggtccagttttgattttcgtcc 41345438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 26828771 - 26828830
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtccatatagaaaaaat 193  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| ||| | || |||||||    
T  26828771 aatatgataattgtccctgtaatttggtccagttttgattttcttccctgtaaaaaaaat 26828830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 14419395 - 14419441
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||    
T  14419395 aatatgataatcgtccctgtattttggggcagttttgattttcgtcc 14419441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 21985631 - 21985585
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||  |||||||||||||||||||| ||||||||||||||||    
T  21985631 aatatgattttcgtccctgtaatttggacccgttttgattttcgtcc 21985585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 47723531 - 47723485
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||  |||||||| ||||||||||||||||||||||||||||    
T  47723531 aatatgattttcgtccctataatttggaccagttttgattttcgtcc 47723485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 26829669 - 26829629
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattt 174  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  26829669 aatatgataatcgtccctgtaatttagtccagttttgattt 26829629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 6822610 - 6822656
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||| ||||||||||||||| | ||||||| |||||||||    
T  6822610 aatatgataattgtccctgtaatttggtcaagttttggttttcgtcc 6822656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 46196791 - 46196746
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgtc 179  Q
    ||||||||||||||||||||||||||| |||  ||| |||||||||    
T  46196791 aatatgataatcgtccctgtaatttggtccaaattttattttcgtc 46196746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 7945349 - 7945385
Alignment:
Q  144 tcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    |||||||||||||||||||  ||||||||||||||||    
T  7945349 tcgtccctgtaatttggacacgttttgattttcgtcc 7945385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 11337754 - 11337718
Alignment:
Q  144 tcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||| || ||||||||||||||||    
T  11337754 tcgtccctgtaatttgggcccgttttgattttcgtcc 11337718  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 21984874 - 21984910
Alignment:
Q  144 tcgtccctgtaatttggaccagttttgattttcgtcc 180  Q
    ||||||||||||||||| || ||||||||||||||||    
T  21984874 tcgtccctgtaatttgggcccgttttgattttcgtcc 21984910  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 40193866 - 40193910
Alignment:
Q  134 aatatgataatcgtccctgtaatttggaccagttttgattttcgt 178  Q
    ||||||||||||||| |||||||||||  || |||||||||||||    
T  40193866 aatatgataatcgtcgctgtaatttgggtcaattttgattttcgt 40193910  T

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Target: scaffold0100 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 35307 - 35262
Alignment:
Q  147 tccctgtaatttggaccagttttgattttcgtccatatagaaaaaa 192  Q
    |||||||||||| || |||||||||||||||||||| || ||||||    
T  35307 tccctgtaatttagatcagttttgattttcgtccatgtaaaaaaaa 35262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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