View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3695_high_7 (Length: 402)
Name: NF3695_high_7
Description: NF3695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3695_high_7 |
 | |
|
| [»] scaffold0168 (1 HSPs) |
| | |
|
| [»] scaffold0273 (1 HSPs) |
| | |
|
| [»] scaffold1696 (1 HSPs) |
| | |
|
| [»] scaffold0951 (1 HSPs) |
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|
| [»] scaffold0295 (1 HSPs) |
| | |
|
| [»] scaffold0417 (1 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
| [»] scaffold0007 (1 HSPs) |
| | |
|
| [»] scaffold0432 (1 HSPs) |
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| [»] scaffold0157 (1 HSPs) |
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| [»] scaffold1223 (1 HSPs) |
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| [»] scaffold0176 (1 HSPs) |
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| [»] scaffold0027 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 28)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 244 - 335
Target Start/End: Original strand, 48293932 - 48294023
Alignment:
| Q |
244 |
tgtaaatcgaaatccagaattatgaatatcctccattcatctcttctcttaatccatttacaaatcatccctttcataaattcatcatccct |
335 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
48293932 |
tgtaaatcgaaatccagaattatgaatatcctccattcatctcttctcttaatccatttacaaatcatccctttcataaattcatcacccct |
48294023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 48293680 - 48293815
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacact-atgtgttagaattttaagtgatgtggccaatggaacacttat |
99 |
Q |
| |
|
||||||||||||| |||||||||| |||| | ||||||||||| |||||||||| || ||| ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
48293680 |
attatcatttttgttgcatttttcatcctgccctccattttattctccaaaaacgctgatgcgtttgaattttaagtgatgtggccaatggaacacttat |
48293779 |
T |
|
| Q |
100 |
gtggtactgcatatgtgaaaaaacaattatacatgtc |
136 |
Q |
| |
|
|||| | |||||||||| ||||||||||||||||||| |
|
|
| T |
48293780 |
gtggcaatgcatatgtg-aaaaacaattatacatgtc |
48293815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 48294039 - 48294105
Alignment:
| Q |
321 |
aaattcatcatccctaaatttatcttcaactcc-aaaactcttttatctcttttcataccaacaaaa |
386 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
48294039 |
aaatttatcatccctaaatttatcttcaactccaaaaactcttttatctcttttcataccaacaaaa |
48294105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 44892600 - 44892505
Alignment:
| Q |
8 |
tttttgctgcatttttcgtcctacactccattttatcctccaaaaacact-atgtgttagaattttaagtgatgtggccaatggaacacttatgtg |
102 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||||||| || || || |||||||||| ||||||||| ||| ||||| |||||| |
|
|
| T |
44892600 |
tttttgttgcatttttcgtcctaccctccattttatcctccaaaaacgctgatatggcagaattttaactgatgtggcaaataaaacacatatgtg |
44892505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 48713805 - 48713722
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacac-tatgtgttagaattttaagtgatgtgg |
83 |
Q |
| |
|
||||||||||||| ||||||||||||||| | |||||||||||||||||||||| | |||||| ||| |||||| |||||||| |
|
|
| T |
48713805 |
attatcatttttgttgcatttttcgtcctcccctccattttatcctccaaaaacgcacatgtgtcagatttttaactgatgtgg |
48713722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11153606 - 11153553
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
11153606 |
attatcatttttgttgcatttttcgtcctaccctccattttattctccaaaaac |
11153553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25447695 - 25447642
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
25447695 |
attatcatttttgttgcatttttcgtcctaccctccattttattctccaaaaac |
25447642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4219643 - 4219696
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
4219643 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
4219696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12234415 - 12234468
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
12234415 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
12234468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 335
Target Start/End: Complemental strand, 20958125 - 20958068
Alignment:
| Q |
278 |
attcatctcttctcttaatccatttacaaatcatccctttcataaattcatcatccct |
335 |
Q |
| |
|
|||||||| ||||||| |||||||||||| ||||||||| | |||||||||||||||| |
|
|
| T |
20958125 |
attcatctattctcttcatccatttacaattcatcccttccttaaattcatcatccct |
20958068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22170396 - 22170343
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
22170396 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
22170343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33109770 - 33109823
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
33109770 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
33109823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 15523691 - 15523640
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
15523691 |
tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
15523640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45082517 - 45082571
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacac |
56 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||||| |
|
|
| T |
45082517 |
attatcatttttgttgcatttttcgtcctac-ccccattttattctccaaaaacac |
45082571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16691022 - 16691072
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaa |
51 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | | ||||||||||||||| |
|
|
| T |
16691022 |
attatcatttttgttgcatttttcgtcctacccccgattttatcctccaaa |
16691072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2118754 - 2118702
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
2118754 |
attatcatttttgttgcatttttcgtcctac-ccccattttattctccaaaaac |
2118702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22434636 - 22434584
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
22434636 |
attatcatttttgttgcatttttcgtcctac-ccccattttattctccaaaaac |
22434584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38962278 - 38962225
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| || ||||||| |
|
|
| T |
38962278 |
attatcatttttgttgcatttttcgtcctaccccccattttattcttcaaaaac |
38962225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43243739 - 43243687
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| | |||||||||||||||||||| |
|
|
| T |
43243739 |
attatcatttttgttgcattttttgtcctac-ccccattttatcctccaaaaac |
43243687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 46193864 - 46193811
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
46193864 |
attatcatttttattgcatttttcgtcctaccccccattttattctccaaaaac |
46193811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 51020883 - 51020936
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| || ||||||| |
|
|
| T |
51020883 |
attatcatttttgttgcatttttcgtcctaccccccattttattcttcaaaaac |
51020936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 48526282 - 48526333
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
48526282 |
attatcatttttgttgcatttttcgtcctac-ccccattttattctccaaaaa |
48526333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 55191231 - 55191131
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacact-atgtgttagaattttaagtgatgtggccaatggaacacttatgt |
101 |
Q |
| |
|
||||||||||| |||| ||||||| ||| | |||||||||||| ||||| || |||||| |||||||||| ||||||||||||| ||||| ||||| |
|
|
| T |
55191231 |
tatcatttttgttgcacttttcgttctaaccatcattttatcctctaaaaatgctgatgtgtcagaattttaactgatgtggccaataaaacacctatgt |
55191132 |
T |
|
| Q |
102 |
g |
102 |
Q |
| |
|
| |
|
|
| T |
55191131 |
g |
55191131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 12503893 - 12503842
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| ||||||||||||| ||| | ||||||||| |||||||||| |
|
|
| T |
12503893 |
tatcatttttgttgcatttttcgtcataccccccattttattctccaaaaac |
12503842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23494529 - 23494579
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaa |
51 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | ||||||||| ||||||| |
|
|
| T |
23494529 |
attatcatttttattgcatttttcgtcctaccccccattttattctccaaa |
23494579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 43281244 - 43281198
Alignment:
| Q |
7 |
atttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
||||||| ||||||||||||||||| | ||||||||||||| ||||| |
|
|
| T |
43281244 |
atttttgttgcatttttcgtcctaccccccattttatcctcaaaaaa |
43281198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48295002 - 48294948
Alignment:
| Q |
1 |
attatcatttttgctgcattttt-cgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||| |||||||| | |||||||||| ||||||||| |
|
|
| T |
48295002 |
attatcatttttgttgcatttttccgtcctaccccccattttatcttccaaaaac |
48294948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20958318 - 20958267
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| | |||||||||||||||||||| |
|
|
| T |
20958318 |
attatcatttttgttgcattttt-gtcctaccc-ccattttatcctccaaaaac |
20958267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 19)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 4624684 - 4624548
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacact-atgtgttagaattttaagtgatgtggccaatggaacacttat |
99 |
Q |
| |
|
|||||||||| || ||||||||||||||||| | |||||||||||| |||||||||| |||||| ||||||||||||||||| |||||| |||||||||| |
|
|
| T |
4624684 |
attatcatttatgttgcatttttcgtcctaccccccattttatccttcaaaaacactgatgtgtcagaattttaagtgatgttgccaatagaacacttat |
4624585 |
T |
|
| Q |
100 |
gtggtactgcatatgtgaaaaaacaattatacatgtc |
136 |
Q |
| |
|
|||| | |||||||||| ||||||||||||||||||| |
|
|
| T |
4624584 |
gtggcaatgcatatgtggaaaaacaattatacatgtc |
4624548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 4624438 - 4624349
Alignment:
| Q |
244 |
tgtaaatcgaaatccagaattatgaatatcctccattcatctcttctcttaatccatttacaaatcatccctttcataaattcatcatcccta |
336 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4624438 |
tgtaaatcgaaatccagaattatgaatatcc---attcacctcttctcttcatccatttacaaatcatccctttcataaattcatcatcccta |
4624349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 7349475 - 7349360
Alignment:
| Q |
2 |
ttatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacac-tatgtgttagaattttaagtgatgtggccaatggaacacttatg |
100 |
Q |
| |
|
|||||||||||| |||| ||||| |||||| | ||||||| |||||||||||| | |||||| ||| |||||| ||||||||| ||| ||||| |||| |
|
|
| T |
7349475 |
ttatcatttttgttgcacttttcatcctaccccccattttttcctccaaaaacgcacatgtgtcagatttttaactgatgtggcaaataaaacacctatg |
7349376 |
T |
|
| Q |
101 |
tggtactgcatatgtg |
116 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
7349375 |
tggcactgcatatgtg |
7349360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13814186 - 13814073
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacactatgtgttagaattttaagtgatgtggccaatggaacacttatg |
100 |
Q |
| |
|
||||||||||||| |||| |||||||||||| | |||||||||||||||||||| | | ||| | | |||||| ||||||||| ||| ||||| |||| |
|
|
| T |
13814186 |
attatcatttttgttgcacttttcgtcctac-ccccattttatcctccaaaaacgc-acatgtcatatttttaactgatgtggcaaataaaacacctatg |
13814089 |
T |
|
| Q |
101 |
tggtactgcatatgtg |
116 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
13814088 |
tggcactgcatatgtg |
13814073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5819388 - 5819335
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
5819388 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
5819335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8647524 - 8647577
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
8647524 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
8647577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19359222 - 19359275
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
19359222 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
19359275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29455201 - 29455148
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
29455201 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
29455148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 4219750 - 4219800
Alignment:
| Q |
2 |
ttatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
4219750 |
ttatcatttttgttgcatttttcgtcctac-ccccattttatcctccaaaaa |
4219800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 24362293 - 24362242
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
24362293 |
tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
24362242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2865214 - 2865161
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| | ||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
2865214 |
attatcatttttgtttcatttttcgtcctaccccccattttattctccaaaaac |
2865161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18183428 - 18183375
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | |||||||| |||||||||| |
|
|
| T |
18183428 |
attatcatttttgttgcatttttcgtcctacccctcattttattctccaaaaac |
18183375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 164650 - 164598
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| | ||||||||| ||||||||| |
|
|
| T |
164650 |
attatcatttttgttgcattttttgtcctaccccccattttattctccaaaaa |
164598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8461016 - 8461068
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| | ||||||||| ||||||||| |
|
|
| T |
8461016 |
attatcatttttgttgcatttttcgtcataccccccattttattctccaaaaa |
8461068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 24361925 - 24361976
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||||||| ||||| |||| |
|
|
| T |
24361925 |
tatcatttttgttgcatttttcgtcctaccccccattttattctccacaaac |
24361976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6019230 - 6019128
Alignment:
| Q |
1 |
attatcatttttgctgcattttt-cgtcctacactccattttatcctccaaaaacact-atgtgttagaattttaagtgatgtggccaatggaacactta |
98 |
Q |
| |
|
||||||||||||| ||||||||| |||||||| ||||||||||||||||||| || ||||| | |||||||| |||||||| |||| ||||| || |
|
|
| T |
6019230 |
attatcatttttgttgcattttttcgtcctacctcccattttatcctccaaaaatgctgatgtgacaaaattttaactgatgtggtcaataaaacaccta |
6019131 |
T |
|
| Q |
99 |
tgt |
101 |
Q |
| |
|
||| |
|
|
| T |
6019130 |
tgt |
6019128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 29454826 - 29454856
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctac |
31 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
29454826 |
attatcatttttgctgcatttttcgtcctac |
29454856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15709057 - 15709109
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| | ||||||||| |||||||||| |
|
|
| T |
15709057 |
attatcatttttgttgcatatttcgtcctac-ccccattttattctccaaaaac |
15709109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25000176 - 25000229
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| | ||||||||| |||||||||| |
|
|
| T |
25000176 |
attatcatttttattgcattttttgtcctaccccccattttattctccaaaaac |
25000229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 10918214 - 10918349
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa-cact-atgtgttagaattttaagtgatgtggccaatggaacacttatg |
100 |
Q |
| |
|
||||||||||| |||||||||| || ||| | ||||||||||||||||||| |||| |||||| | ||||||||||||||||||||||| |||||||||| |
|
|
| T |
10918214 |
tatcatttttgttgcatttttcatcataccccccattttatcctccaaaaaacactgatgtgtcaaaattttaagtgatgtggccaatgaaacacttatg |
10918313 |
T |
|
| Q |
101 |
tggtactgcatatgtgaaaaaacaattatacatgtc |
136 |
Q |
| |
|
||| | |||||| ||| ||||||||||||||||||| |
|
|
| T |
10918314 |
tggcaatgcatacgtggaaaaacaattatacatgtc |
10918349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 43958271 - 43958373
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacact-atgtgttagaattttaagtgatgtggccaatggaacacttat |
99 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||| ||||||| |||||||||| || |||||| | |||| ||||| ||||| |||||| ||||||||| |
|
|
| T |
43958271 |
attatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacgctgatgtgtcaaaattgtaagtaatgtgaccaatgaaacacttat |
43958370 |
T |
|
| Q |
100 |
gtg |
102 |
Q |
| |
|
||| |
|
|
| T |
43958371 |
gtg |
43958373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19176749 - 19176696
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
19176749 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
19176696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33743378 - 33743325
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
33743378 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
33743325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 31133308 - 31133359
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
31133308 |
tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
31133359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 33328246 - 33328297
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||| ||||||| |||||||||| |
|
|
| T |
33328246 |
tatcatttttgttgcatttttcgtcctaccctcgattttattctccaaaaac |
33328297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44831704 - 44831649
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacac |
56 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| | ||||||||| |||||||||||| |
|
|
| T |
44831704 |
attatcatttttgttgcatttttggtcctaccccccattttattctccaaaaacac |
44831649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 9930114 - 9930065
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaa |
52 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||||||| |||||||| |
|
|
| T |
9930114 |
tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaa |
9930065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13224726 - 13224779
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| || |||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
13224726 |
attatcatttttgttgaatttttcgtcctaccccccattttattctccaaaaac |
13224779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41681220 - 41681272
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
41681220 |
attatcatttttgttgcatttttcgtcctac-ccccattttattctccaaaaac |
41681272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11656541 - 11656593
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
|||| |||||||| ||||||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
11656541 |
attaccatttttgttgcatttttcgtcctaccccccattttattctccaaaaa |
11656593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12571949 - 12572003
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcct-acactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||| || | ||||||||| |||||||||| |
|
|
| T |
12571949 |
attatcatttttgttgcatttttcgtcctaaccccccattttattctccaaaaac |
12572003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 22)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 32697159 - 32697044
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacact-atgtgttagaattttaagtgatgtggccaatggaacacttat |
99 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | |||||||||||||||||||| | |||||| |||||||||| ||||||||||||| |||||| ||| |
|
|
| T |
32697159 |
attatcatttttgttgcatttttcgtcctaccc-ccattttatcctccaaaaacgttgatgtgtcagaattttaactgatgtggccaatagaacacctat |
32697061 |
T |
|
| Q |
100 |
gtggtactgcatatgtg |
116 |
Q |
| |
|
|||| | |||||||||| |
|
|
| T |
32697060 |
gtggcaatgcatatgtg |
32697044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 25612436 - 25612323
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacact-atgtgttagaattttaagtgatgtggccaatggaacacttat |
99 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | |||||||||||||||||||| || |||||| | |||||||| ||||||||||||| ||||| ||| |
|
|
| T |
25612436 |
attatcatttttgttgcatttttcgtcctaccccccattttatcctccaaaaacgctgatgtgtcaaaattttaactgatgtggccaataaaacacctat |
25612337 |
T |
|
| Q |
100 |
gtggtactgcatat |
113 |
Q |
| |
|
|||| | ||||||| |
|
|
| T |
25612336 |
gtggcaatgcatat |
25612323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 37220644 - 37220763
Alignment:
| Q |
2 |
ttatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacact-atgtgttagaattttaagtgatgtggccaatggaacacttatg |
100 |
Q |
| |
|
|||||||||||| |||| |||||||||||| |||||||||||||||||||||| || |||||| |||||||||| |||| |||| ||| ||||| ||| |
|
|
| T |
37220644 |
ttatcatttttgttgcacttttcgtcctaccctccattttatcctccaaaaacgctgatgtgtcagaattttaattgat-tggcaaataaaacacctata |
37220742 |
T |
|
| Q |
101 |
tggtactgcatatgtgaaaaa |
121 |
Q |
| |
|
||| | ||||||||||||||| |
|
|
| T |
37220743 |
tggcattgcatatgtgaaaaa |
37220763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 25420600 - 25420499
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacact-atgtgttagaattttaagtgatgtggccaatggaacacttat |
99 |
Q |
| |
|
||||| ||||||| ||||||||||||| ||| | |||||||||||| |||||| | ||||||||||||||||| ||||||||||||| |||||| ||| |
|
|
| T |
25420600 |
attattatttttgttgcatttttcgtcataccccccattttatccttcaaaaatgcagatgtgttagaattttaactgatgtggccaatagaacacctat |
25420501 |
T |
|
| Q |
100 |
gt |
101 |
Q |
| |
|
|| |
|
|
| T |
25420500 |
gt |
25420499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 23227346 - 23227456
Alignment:
| Q |
5 |
tcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacactatgtgttagaattttaagtgatgtggccaatggaacacttatgtggt |
104 |
Q |
| |
|
||||||||| ||||||||||||||| | | |||||||||||||||||||| | | |||| |||||||||| | |||| |||||| ||||| ||||||| |
|
|
| T |
23227346 |
tcatttttgttgcatttttcgtccttctccccattttatcctccaaaaacgc-acgtgtcagaattttaactcatgtagccaataaaacacctatgtggc |
23227444 |
T |
|
| Q |
105 |
actgcatatgtg |
116 |
Q |
| |
|
| |||||||||| |
|
|
| T |
23227445 |
aatgcatatgtg |
23227456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5137066 - 5137119
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
5137066 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
5137119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22425272 - 22425219
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
22425272 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
22425219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23644548 - 23644601
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
23644548 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
23644601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25853686 - 25853633
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
25853686 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
25853633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37727015 - 37727068
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
37727015 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
37727068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41046786 - 41046839
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
41046786 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
41046839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43973527 - 43973580
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
43973527 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
43973580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48453075 - 48453128
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
48453075 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
48453128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23228467 - 23228412
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacac |
56 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
23228467 |
attatcatttttattgcatttttcgtcctacctcccattttatcctccaaaaacac |
23228412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 24301013 - 24300962
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
24301013 |
tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
24300962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18010204 - 18010158
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctc |
47 |
Q |
| |
|
||||||||||||| ||||||||||||||| | ||||||||||||||| |
|
|
| T |
18010204 |
attatcatttttgttgcatttttcgtcctgccctccattttatcctc |
18010158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31779111 - 31779058
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| |||||||||||||| || | ||||||||| |||||||||| |
|
|
| T |
31779111 |
attatcatttttgttgcatttttcgtcccaccccccattttattctccaaaaac |
31779058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39556036 - 39555983
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| | ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
39556036 |
attatcattttcgttgcatttttcgtcctaccccccattttattctccaaaaac |
39555983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 50116867 - 50116815
Alignment:
| Q |
2 |
ttatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
|||||||||||| |||| |||||||||||| | ||||||| |||||||||||| |
|
|
| T |
50116867 |
ttatcatttttgttgcaattttcgtcctaccccccattttttcctccaaaaac |
50116815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20840646 - 20840693
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctcc |
48 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||| |
|
|
| T |
20840646 |
attatcatttttgttgcatttttcgtcctaccccccattttattctcc |
20840693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 26837813 - 26837763
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
||||||||||| ||||||||| ||||||| | ||||||||| ||||||||| |
|
|
| T |
26837813 |
tatcatttttgttgcattttttgtcctaccccccattttattctccaaaaa |
26837763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 51474792 - 51474739
Alignment:
| Q |
2 |
ttatcatttttgctgcatttttcgtcctacactcca-ttttatcctccaaaaac |
54 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | | | ||||||||||||||||| |
|
|
| T |
51474792 |
ttatcatttttgttgcatttttcgtcctacccccaatttttatcctccaaaaac |
51474739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28584381 - 28584265
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac-actatgtgttagaattttaagtgatgtggccaatggaacacttat |
99 |
Q |
| |
|
||||||||||||| || |||||||||| ||| | |||||||||||||||||||| | |||||| ||| |||||| ||||||||| |||| ||||| ||| |
|
|
| T |
28584381 |
attatcatttttgttgtatttttcgtcttaccccccattttatcctccaaaaacgccgatgtgtcagatttttaactgatgtggcaaatgaaacacctat |
28584282 |
T |
|
| Q |
100 |
gtggtactgcatatgtg |
116 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
28584281 |
gtggcactgcatatgtg |
28584265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 38161037 - 38161121
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacac-tatgtgttagaattttaagtgatgtggc |
84 |
Q |
| |
|
||||| ||||||| ||||||||||||||||| | |||||||||||||||||||| | |||||| ||| |||||| ||||||||| |
|
|
| T |
38161037 |
attattatttttgttgcatttttcgtcctactccccattttatcctccaaaaacgcacatgtgtcagatttttaactgatgtggc |
38161121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19830506 - 19830559
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
19830506 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
19830559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32005073 - 32005020
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
32005073 |
attatcatttttgttgcatttttcgtcctactccccattttattctccaaaaac |
32005020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37786853 - 37786906
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
37786853 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
37786906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4641526 - 4641578
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
4641526 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaa |
4641578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28583525 - 28583577
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
28583525 |
attatcatttttattgcatttttcgtcctaccccccattttatcctccaaaaa |
28583577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34534250 - 34534198
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
34534250 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaa |
34534198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2659299 - 2659246
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| |||||||||| |||||| | ||||||||| |||||||||| |
|
|
| T |
2659299 |
attatcatttttgttgcatttttcatcctaccccccattttattctccaaaaac |
2659246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19590611 - 19590664
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| |||||||||| |||||| | ||||||||| |||||||||| |
|
|
| T |
19590611 |
attatcatttttgttgcatttttcatcctaccccccattttattctccaaaaac |
19590664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23953188 - 23953135
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| | ||||||||| |||||||||| |
|
|
| T |
23953188 |
attatcatttttgttgcatttttcgtcataccccccattttattctccaaaaac |
23953135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29100310 - 29100257
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| | ||||||||| |||||||||| |
|
|
| T |
29100310 |
attatcatttttgttgcattttttgtcctaccccccattttattctccaaaaac |
29100257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38858729 - 38858782
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| | ||||||||| |||||||||| |
|
|
| T |
38858729 |
attatcatttttgttgcatttttggtcctaccccccattttattctccaaaaac |
38858782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0168 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0168
Description:
Target: scaffold0168; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 7746 - 7631
Alignment:
| Q |
2 |
ttatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacac-tatgtgttagaattttaagtgatgtggccaatggaacacttatg |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | | |||||||||||||||||| | |||||| ||| |||||| ||||||||| ||| ||||| |||| |
|
|
| T |
7746 |
ttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacgcacatgtgtcagatttttaactgatgtggcaaataaaacacctatg |
7647 |
T |
|
| Q |
101 |
tggtactgcatatgtg |
116 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
7646 |
tggcactgcatatgtg |
7631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 52268377 - 52268492
Alignment:
| Q |
2 |
ttatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac--actatgtgttagaattttaagtgatgtggccaatggaacacttat |
99 |
Q |
| |
|
|||||||||||| |||| |||||||||||| | ||||||| |||||||||||| || |||||| ||| ||| || ||||||||| ||| ||||||||| |
|
|
| T |
52268377 |
ttatcatttttgttgcacttttcgtcctaccccccattttttcctccaaaaacggac-atgtgtcagattttaaactgatgtggcaaataaaacacttat |
52268475 |
T |
|
| Q |
100 |
gtggtactgcatatgtg |
116 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
52268476 |
gtggcactgcatatgtg |
52268492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 21856500 - 21856449
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
21856500 |
tatcatttttgctgcatttttcgtcctactccccattttattctccaaaaac |
21856449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5540277 - 5540224
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
5540277 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
5540224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5963037 - 5962984
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
5963037 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
5962984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15173182 - 15173235
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
15173182 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
15173235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18984205 - 18984258
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
18984205 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
18984258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29307039 - 29307092
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
29307039 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
29307092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29869706 - 29869759
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
29869706 |
attattatttttgttgcatttttcgtcctacaccccattttattctccaaaaac |
29869759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50970737 - 50970684
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
50970737 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
50970684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8679000 - 8678949
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
8679000 |
attatcatttttgttgcatttttcgtcctac-ctccattttattctccaaaaa |
8678949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 9019061 - 9019112
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
9019061 |
tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
9019112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 33144376 - 33144325
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
33144376 |
tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
33144325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15646654 - 15646601
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | | ||||||| |||||||||| |
|
|
| T |
15646654 |
attatcatttttgttgcatttttcgtcctacccccaattttattctccaaaaac |
15646601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39154105 - 39154158
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||| ||| |||||||||| |
|
|
| T |
39154105 |
attatcatttttgttgcatttttcgtcctaccccccattctattctccaaaaac |
39154158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 17433304 - 17433355
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| |||||||||| |||||| | ||||||||| |||||||||| |
|
|
| T |
17433304 |
tatcatttttgttgcatttttcatcctaccccccattttattctccaaaaac |
17433355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26859518 - 26859466
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||| ||||| |||||||||| |
|
|
| T |
26859518 |
attatcatttttgttgcatttttcgtcctacccccca-tttattctccaaaaac |
26859466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 21)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 15551586 - 15551638
Alignment:
| Q |
2 |
ttatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
15551586 |
ttatcatttttgttgcatttttcgtccaaccctccattttatcctccaaaaac |
15551638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26538183 - 26538238
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacac |
56 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||||| |
|
|
| T |
26538183 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacac |
26538238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 239438 - 239491
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
239438 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
239491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11090607 - 11090660
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
11090607 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
11090660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22374406 - 22374459
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
22374406 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
22374459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35779794 - 35779847
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| | |||||||||||||||||||| |
|
|
| T |
35779794 |
attatcatttttgttgcattttttgtcctaccccccattttatcctccaaaaac |
35779847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35781122 - 35781069
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| |||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
35781122 |
attatcatttttgttgcatttttcgtcctaacccccattttatcctccaaaaac |
35781069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40027226 - 40027279
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||| |
|
|
| T |
40027226 |
attatcatttttgttgcattttttgtcctaccctccattttattctccaaaaac |
40027279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40815804 - 40815751
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
40815804 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
40815751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 20444836 - 20444888
Alignment:
| Q |
2 |
ttatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
|||||||||||| |||| |||||||||||| | |||||||||||||||||||| |
|
|
| T |
20444836 |
ttatcatttttgttgcagttttcgtcctaccccccattttatcctccaaaaac |
20444888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 374
Target Start/End: Complemental strand, 5036800 - 5036763
Alignment:
| Q |
337 |
aatttatcttcaactccaaaactcttttatctcttttc |
374 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5036800 |
aatttatcttcaactccaaaactctttaatctcttttc |
5036763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 374
Target Start/End: Original strand, 6434364 - 6434401
Alignment:
| Q |
337 |
aatttatcttcaactccaaaactcttttatctcttttc |
374 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6434364 |
aatttatcttcaactccaaaactctttcatctcttttc |
6434401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8972323 - 8972376
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| |||||||||||| |||| | | |||||||||||||||||| |
|
|
| T |
8972323 |
attatcatttttgttgcatttttcgttctaccccctattttatcctccaaaaac |
8972376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15552513 - 15552460
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| || |||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
15552513 |
attatcatttttgttgtatttttcgtcctaccctccattttgccctccaaaaac |
15552460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43058419 - 43058472
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| |||||||||||| |||| | ||||||||| |||||||||| |
|
|
| T |
43058419 |
attatcatttttgttgcatttttcgttctaccccccattttattctccaaaaac |
43058472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 14432230 - 14432281
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| ||||||||| ||||||| | ||||||||| |||||||||| |
|
|
| T |
14432230 |
tatcatttttgttgcatttttggtcctaccccccattttattctccaaaaac |
14432281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 18451288 - 18451237
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| |||||||||| |||||| | ||||||||| |||||||||| |
|
|
| T |
18451288 |
tatcatttttgttgcatttttcttcctaccccccattttattctccaaaaac |
18451237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8425819 - 8425766
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| | | ||||||| |||||||||| |
|
|
| T |
8425819 |
attatcatttttgttgcatttttcgtcttacccccaattttattctccaaaaac |
8425766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 5036869 - 5036813
Alignment:
| Q |
282 |
atctcttctcttaatccatttacaaatcatccctttcataaattcatcatccctaaa |
338 |
Q |
| |
|
||||||||||| | |||||||||| ||||| ||| |||| |||||||||||||||| |
|
|
| T |
5036869 |
atctcttctctccaaccatttacaattcatctcttccatagattcatcatccctaaa |
5036813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26538538 - 26538498
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccatttt |
41 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||| |
|
|
| T |
26538538 |
attatcatttttgttgcatttttcgtcctaccccccatttt |
26538498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28616699 - 28616751
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
||||||||||||| |||| |||||||||||| | ||||||||| |||||||| |
|
|
| T |
28616699 |
attatcatttttgttgcaattttcgtcctaccccccattttattatccaaaaa |
28616751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0273 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0273
Description:
Target: scaffold0273; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4666 - 4611
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacac |
56 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||||| |
|
|
| T |
4666 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacac |
4611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 18)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11445073 - 11445128
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacac |
56 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||||||| ||| |||||||| |
|
|
| T |
11445073 |
attatcatttttgttgcatttttcgtcctaccctccattttattctctaaaaacac |
11445128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10900389 - 10900336
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
10900389 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
10900336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11277041 - 11276988
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
11277041 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
11276988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15828100 - 15828047
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
15828100 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
15828047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31470775 - 31470722
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
31470775 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
31470722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 18296232 - 18296283
Alignment:
| Q |
2 |
ttatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
18296232 |
ttatcatttttgttgcatttttcgtcctac-ccccattttatcctccaaaaac |
18296283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 29035095 - 29035043
Alignment:
| Q |
2 |
ttatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
|||||||||||| |||||||||||||| || ||||||||| |||||||||||| |
|
|
| T |
29035095 |
ttatcatttttgttgcatttttcgtcccaccctccattttttcctccaaaaac |
29035043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 20741188 - 20741239
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
20741188 |
tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
20741239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3835185 - 3835135
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaa |
51 |
Q |
| |
|
||||||||||||| |||||||||||||||| | ||||||||||||||||| |
|
|
| T |
3835185 |
attatcatttttgtggcatttttcgtcctaccccccattttatcctccaaa |
3835135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2319758 - 2319811
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| ||||| |||| |
|
|
| T |
2319758 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccagaaac |
2319811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18257223 - 18257276
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| | ||||||||| |||||||||| |
|
|
| T |
18257223 |
attatcatttttgttgcatttttcgtcataccccccattttattctccaaaaac |
18257276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18505378 - 18505329
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaa |
50 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||| |
|
|
| T |
18505378 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaa |
18505329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28472723 - 28472775
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
28472723 |
attatcatttttgttgcatttttcgtcctac-ccccattttattctccaaaaac |
28472775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29859912 - 29859964
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
29859912 |
attatcatttttgttgcatttttcgtcctac-ccccattttattctccaaaaac |
29859964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1149891 - 1149839
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
|||| |||||||| ||||||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
1149891 |
attaccatttttgttgcatttttcgtcctaccccccattttattctccaaaaa |
1149839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2322677 - 2322626
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaa |
52 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | |||||||| |||||||| |
|
|
| T |
2322677 |
attatcatttttgttgcatttttcgtcctacccctcattttattctccaaaa |
2322626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12935616 - 12935561
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaacac |
56 |
Q |
| |
|
||||||||||||| | ||||||||||||||| | ||||||||| ||||| |||||| |
|
|
| T |
12935616 |
attatcatttttgttacatttttcgtcctaccccccattttattctccataaacac |
12935561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 29033521 - 29033637
Alignment:
| Q |
2 |
ttatcatttttgctgcatttttcgtcctacactcca-ttttatcctccaaaaacac-tatgtgttagaattttaagtgatgtggccaatggaacacttat |
99 |
Q |
| |
|
|||||||||||| |||| |||| |||||| | ||| |||| |||||||||||| | |||||| ||| |||||| ||||||||| ||| ||||| ||| |
|
|
| T |
29033521 |
ttatcatttttgttgcacatttcatcctaccccccatttttttcctccaaaaacgcacatgtgtcagatttttaactgatgtggcaaataaaacacctat |
29033620 |
T |
|
| Q |
100 |
gtggtactgcatatgtg |
116 |
Q |
| |
|
|||| | |||||||||| |
|
|
| T |
29033621 |
gtggcattgcatatgtg |
29033637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1696 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1696
Description:
Target: scaffold1696; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 535 - 587
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
535 |
attatcatttttgttgcatttttcgtcctacac-ccattttatcctcaaaaaac |
587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0951 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0951
Description:
Target: scaffold0951; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1753 - 1806
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
1753 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
1806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0295 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0295
Description:
Target: scaffold0295; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4879 - 4932
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
4879 |
attatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
4932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0417 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0417
Description:
Target: scaffold0417; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 10709 - 10759
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
||||||||| | ||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
10709 |
tatcattttcgttgcatttttcgtcctaccctccattttattctccaaaaa |
10759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 134132 - 134079
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
|||| |||||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
134132 |
attaacatttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
134079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 64388 - 64441
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| | ||||||||| |||||||||| |
|
|
| T |
64388 |
attatcatttttgttgcatttttcgtcataccccccattttattctccaaaaac |
64441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0432 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0432
Description:
Target: scaffold0432; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10331 - 10280
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaa |
53 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
10331 |
attatcatttttgttgcatttttcgtcctac-ccccattttattctccaaaaa |
10280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0157 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0157
Description:
Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 16584 - 16635
Alignment:
| Q |
3 |
tatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||| ||||||||||||| ||| | ||||||||| |||||||||| |
|
|
| T |
16584 |
tatcatttttgttgcatttttcgtcataccccccattttattctccaaaaac |
16635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1223 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1223
Description:
Target: scaffold1223; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 846 - 891
Alignment:
| Q |
9 |
ttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||| ||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
846 |
ttttgttgcatttttcgtcctaccccccattttattctccaaaaac |
891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0176 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0176
Description:
Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18921 - 18973
Alignment:
| Q |
1 |
attatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
||||||||||||| |||||||||| |||||| | ||||||||| |||||||||| |
|
|
| T |
18921 |
attatcatttttgttgcatttttcatcctac-ccccattttattctccaaaaac |
18973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 42616 - 42565
Alignment:
| Q |
2 |
ttatcatttttgctgcatttttcgtcctacactccattttatcctccaaaaac |
54 |
Q |
| |
|
|||||||||||| | ||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
42616 |
ttatcatttttgtttcatttttcgtcctac-ccccattttattctccaaaaac |
42565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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