View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3696_low_8 (Length: 429)

Name: NF3696_low_8
Description: NF3696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3696_low_8
NF3696_low_8
[»] chr2 (49 HSPs)
chr2 (206-421)||(36447313-36447532)
chr2 (203-312)||(40756911-40757025)
chr2 (203-307)||(22388138-22388247)
chr2 (203-313)||(39561895-39562005)
chr2 (203-307)||(23366957-23367066)
chr2 (203-291)||(1646471-1646564)
chr2 (203-307)||(3519075-3519184)
chr2 (201-307)||(37673741-37673852)
chr2 (203-292)||(1102684-1102778)
chr2 (200-312)||(12969737-12969854)
chr2 (203-307)||(39938338-39938447)
chr2 (254-313)||(28110151-28110210)
chr2 (13-131)||(11069856-11069974)
chr2 (254-306)||(19976497-19976549)
chr2 (338-386)||(1002842-1002890)
chr2 (18-82)||(16034920-16034984)
chr2 (18-141)||(18902529-18902653)
chr2 (338-390)||(34242088-34242140)
chr2 (18-82)||(37560156-37560220)
chr2 (18-82)||(38962746-38962810)
chr2 (18-82)||(41187832-41187896)
chr2 (18-141)||(41220618-41220742)
chr2 (338-385)||(4917880-4917927)
chr2 (13-120)||(6358172-6358279)
chr2 (238-304)||(32838964-32839035)
chr2 (18-131)||(331484-331597)
chr2 (344-408)||(12969857-12969919)
chr2 (338-387)||(18078172-18078221)
chr2 (343-422)||(24777749-24777827)
chr2 (13-141)||(25540403-25540532)
chr2 (209-313)||(37284525-37284632)
chr2 (18-82)||(7747257-7747321)
chr2 (18-141)||(10823043-10823167)
chr2 (18-141)||(14169608-14169732)
chr2 (18-78)||(14853430-14853490)
chr2 (18-82)||(15234120-15234184)
chr2 (18-82)||(21286427-21286491)
chr2 (18-82)||(42770710-42770774)
chr2 (21-88)||(10106574-10106641)
chr2 (18-89)||(19976859-19976930)
chr2 (338-407)||(32840284-32840351)
chr2 (13-142)||(35946717-35946846)
chr2 (344-408)||(1102600-1102661)
chr2 (34-131)||(10026626-10026723)
chr2 (18-131)||(39201518-39201631)
chr2 (18-141)||(2550851-2550975)
chr2 (259-307)||(28401396-28401444)
chr2 (34-141)||(34130301-34130408)
chr2 (18-82)||(39806944-39807008)
[»] chr5 (37 HSPs)
chr5 (8-204)||(7736845-7737042)
chr5 (203-313)||(25683229-25683344)
chr5 (203-307)||(40886610-40886719)
chr5 (203-313)||(734339-734454)
chr5 (203-307)||(12806853-12806962)
chr5 (203-307)||(25773817-25773926)
chr5 (203-307)||(30720492-30720601)
chr5 (203-307)||(36561099-36561208)
chr5 (203-307)||(10285058-10285167)
chr5 (210-313)||(11319718-11319826)
chr5 (203-312)||(1056625-1056737)
chr5 (203-307)||(37900623-37900732)
chr5 (209-313)||(39071044-39071153)
chr5 (234-313)||(11795314-11795398)
chr5 (203-313)||(23097724-23097839)
chr5 (336-409)||(39070979-39071050)
chr5 (338-422)||(734450-734532)
chr5 (18-141)||(42086311-42086435)
chr5 (338-422)||(11319641-11319722)
chr5 (205-307)||(16983425-16983532)
chr5 (18-120)||(12081892-12081994)
chr5 (18-141)||(5731919-5732043)
chr5 (18-82)||(21149718-21149782)
chr5 (214-312)||(16054274-16054377)
chr5 (11-98)||(24875322-24875409)
chr5 (203-307)||(26168076-26168185)
chr5 (14-82)||(25467390-25467458)
chr5 (338-408)||(25683340-25683408)
chr5 (222-312)||(30402981-30403076)
chr5 (339-429)||(1056397-1056483)
chr5 (338-387)||(16054228-16054277)
chr5 (18-120)||(14588638-14588740)
chr5 (18-131)||(7866565-7866678)
chr5 (33-141)||(9805003-9805112)
chr5 (18-131)||(19572708-19572821)
chr5 (200-241)||(30720731-30720772)
chr5 (14-114)||(37263221-37263320)
[»] chr8 (37 HSPs)
chr8 (199-307)||(40918727-40918840)
chr8 (203-307)||(7147081-7147190)
chr8 (203-307)||(11646325-11646434)
chr8 (203-307)||(36068248-36068357)
chr8 (203-307)||(40058303-40058412)
chr8 (203-307)||(30999524-30999633)
chr8 (203-291)||(43275399-43275492)
chr8 (203-313)||(35866775-35866890)
chr8 (202-307)||(37345739-37345849)
chr8 (203-307)||(2539930-2540039)
chr8 (203-307)||(3585619-3585728)
chr8 (203-307)||(11174223-11174332)
chr8 (203-313)||(27035157-27035272)
chr8 (203-313)||(28568080-28568195)
chr8 (203-313)||(28575673-28575788)
chr8 (203-313)||(28562583-28562698)
chr8 (200-306)||(45400767-45400878)
chr8 (209-313)||(26628822-26628931)
chr8 (218-313)||(20546308-20546408)
chr8 (338-407)||(26628927-26628997)
chr8 (338-422)||(35866696-35866779)
chr8 (221-313)||(27563885-27563982)
chr8 (18-82)||(6100459-6100523)
chr8 (338-407)||(27035094-27035161)
chr8 (25-82)||(18374004-18374061)
chr8 (338-409)||(28568016-28568084)
chr8 (338-409)||(28575609-28575677)
chr8 (338-409)||(28562518-28562587)
chr8 (199-241)||(45278716-45278758)
chr8 (345-409)||(13881073-13881135)
chr8 (13-141)||(14666070-14666199)
chr8 (344-408)||(30999641-30999703)
chr8 (18-141)||(10535403-10535526)
chr8 (18-82)||(10927593-10927657)
chr8 (254-306)||(13881011-13881063)
chr8 (14-141)||(14846559-14846686)
chr8 (201-241)||(27034995-27035035)
[»] chr1 (63 HSPs)
chr1 (203-307)||(284501-284610)
chr1 (203-313)||(51064754-51064869)
chr1 (203-307)||(40783657-40783766)
chr1 (202-307)||(321794-321904)
chr1 (203-307)||(23045279-23045388)
chr1 (203-313)||(23526401-23526516)
chr1 (203-306)||(24771906-24772014)
chr1 (203-307)||(47037852-47037961)
chr1 (198-312)||(33082907-33083026)
chr1 (208-313)||(46771800-46771910)
chr1 (210-312)||(23166858-23166965)
chr1 (210-313)||(24876723-24876831)
chr1 (338-409)||(31003898-31003967)
chr1 (238-313)||(40261320-40261400)
chr1 (209-307)||(27210961-27211064)
chr1 (203-313)||(31003787-31003902)
chr1 (203-313)||(34458724-34458839)
chr1 (203-313)||(27143014-27143127)
chr1 (254-306)||(40052520-40052572)
chr1 (18-89)||(12744576-12744647)
chr1 (18-89)||(12755566-12755637)
chr1 (208-313)||(14925626-14925734)
chr1 (203-305)||(18396864-18396971)
chr1 (210-312)||(25929261-25929368)
chr1 (210-292)||(40562293-40562380)
chr1 (254-307)||(1837884-1837937)
chr1 (13-141)||(9659179-9659307)
chr1 (338-386)||(27143123-27143171)
chr1 (338-408)||(23526337-23526405)
chr1 (18-89)||(45726486-45726557)
chr1 (338-384)||(51064865-51064911)
chr1 (199-241)||(51064995-51065037)
chr1 (338-387)||(18396811-18396860)
chr1 (254-307)||(31061515-31061568)
chr1 (267-307)||(3657242-3657282)
chr1 (18-82)||(5855506-5855570)
chr1 (18-141)||(8763975-8764099)
chr1 (18-82)||(16263529-16263593)
chr1 (18-141)||(18649352-18649476)
chr1 (18-114)||(31734273-31734368)
chr1 (14-141)||(41663856-41663984)
chr1 (18-82)||(45361942-45362006)
chr1 (14-141)||(49078094-49078222)
chr1 (18-82)||(51437453-51437517)
chr1 (203-254)||(3943753-3943804)
chr1 (203-254)||(41959799-41959850)
chr1 (200-241)||(284330-284371)
chr1 (18-131)||(2567260-2567373)
chr1 (13-50)||(13265917-13265954)
chr1 (338-387)||(14351872-14351921)
chr1 (200-241)||(23045518-23045559)
chr1 (344-408)||(24772023-24772085)
chr1 (344-408)||(33082842-33082904)
chr1 (13-82)||(34334355-34334424)
chr1 (338-422)||(34458835-34458916)
chr1 (339-409)||(3657173-3657239)
chr1 (18-82)||(16956450-16956514)
chr1 (18-82)||(17358531-17358595)
chr1 (18-82)||(18808249-18808313)
chr1 (18-141)||(26325796-26325920)
chr1 (201-241)||(41959076-41959116)
chr1 (22-82)||(44969653-44969712)
chr1 (18-82)||(50503421-50503485)
[»] chr7 (31 HSPs)
chr7 (203-307)||(27813979-27814088)
chr7 (203-307)||(36453124-36453233)
chr7 (203-307)||(10981676-10981785)
chr7 (203-307)||(25614353-25614462)
chr7 (203-307)||(47110618-47110727)
chr7 (203-307)||(40349130-40349238)
chr7 (201-313)||(16662255-16662372)
chr7 (201-313)||(17636615-17636732)
chr7 (14-82)||(23823931-23823999)
chr7 (20-82)||(29151928-29151990)
chr7 (18-131)||(4195212-4195325)
chr7 (18-131)||(17748392-17748505)
chr7 (18-98)||(1797446-1797526)
chr7 (254-313)||(27941040-27941099)
chr7 (344-385)||(7743515-7743556)
chr7 (18-131)||(42210272-42210385)
chr7 (22-82)||(365130-365190)
chr7 (238-313)||(3091675-3091755)
chr7 (18-141)||(10047875-10047999)
chr7 (18-78)||(16802109-16802169)
chr7 (18-141)||(48804669-48804793)
chr7 (338-422)||(3091599-3091679)
chr7 (18-82)||(4228813-4228874)
chr7 (18-120)||(22973953-22974055)
chr7 (254-303)||(16360549-16360598)
chr7 (21-82)||(43862031-43862092)
chr7 (17-82)||(46414660-46414725)
chr7 (338-409)||(16662190-16662259)
chr7 (338-409)||(17636550-17636619)
chr7 (32-120)||(34659226-34659314)
chr7 (18-141)||(38578866-38578990)
[»] chr4 (48 HSPs)
chr4 (203-307)||(21310589-21310698)
chr4 (201-307)||(12071728-12071839)
chr4 (205-307)||(21661537-21661644)
chr4 (205-307)||(21670301-21670408)
chr4 (203-307)||(14261212-14261321)
chr4 (203-307)||(22321268-22321377)
chr4 (203-307)||(24706247-24706356)
chr4 (203-307)||(25704819-25704928)
chr4 (203-307)||(40122487-40122596)
chr4 (203-313)||(19692884-19692999)
chr4 (203-313)||(19703469-19703584)
chr4 (203-307)||(44569005-44569114)
chr4 (213-313)||(50768024-50768129)
chr4 (14-139)||(295534-295659)
chr4 (204-313)||(21064923-21065037)
chr4 (210-312)||(6128956-6129063)
chr4 (203-313)||(20249014-20249129)
chr4 (202-293)||(50839030-50839126)
chr4 (213-306)||(18507276-18507374)
chr4 (338-422)||(19692805-19692888)
chr4 (338-422)||(19703390-19703473)
chr4 (203-312)||(32543642-32543756)
chr4 (18-141)||(4736585-4736708)
chr4 (338-421)||(6129060-6129142)
chr4 (41-114)||(14859302-14859375)
chr4 (18-141)||(5472847-5472971)
chr4 (30-141)||(14124016-14124128)
chr4 (18-82)||(53599048-53599112)
chr4 (338-407)||(20249125-20249192)
chr4 (18-142)||(29895775-29895900)
chr4 (338-422)||(32543563-32543645)
chr4 (18-141)||(20128297-20128421)
chr4 (18-141)||(38166015-38166139)
chr4 (14-77)||(14567943-14568006)
chr4 (21-139)||(21429292-21429411)
chr4 (43-82)||(35359749-35359788)
chr4 (203-238)||(39295418-39295453)
chr4 (14-131)||(8889006-8889123)
chr4 (344-408)||(12071658-12071720)
chr4 (344-408)||(22321385-22321447)
chr4 (13-82)||(24850686-24850754)
chr4 (263-312)||(26676645-26676694)
chr4 (344-408)||(34324700-34324762)
chr4 (344-408)||(40122604-40122665)
chr4 (13-114)||(43458596-43458697)
chr4 (18-82)||(1446814-1446878)
chr4 (18-141)||(2559295-2559419)
chr4 (203-239)||(34324618-34324654)
[»] chr3 (52 HSPs)
chr3 (203-307)||(13365011-13365120)
chr3 (203-307)||(46694110-46694219)
chr3 (203-313)||(18355868-18355983)
chr3 (203-305)||(29375302-29375409)
chr3 (203-307)||(19241668-19241777)
chr3 (203-307)||(36881448-36881557)
chr3 (203-308)||(48820507-48820617)
chr3 (200-307)||(3383244-3383356)
chr3 (202-312)||(32834988-32835103)
chr3 (203-307)||(199023-199132)
chr3 (203-307)||(23087931-23088040)
chr3 (214-313)||(54086714-54086818)
chr3 (339-409)||(24064320-24064388)
chr3 (209-306)||(6901730-6901831)
chr3 (203-307)||(13703380-13703489)
chr3 (18-89)||(3755553-3755624)
chr3 (214-312)||(48436387-48436490)
chr3 (338-422)||(18355979-18356062)
chr3 (218-307)||(43750304-43750398)
chr3 (212-306)||(24064389-24064488)
chr3 (203-281)||(26783663-26783746)
chr3 (339-409)||(52009162-52009230)
chr3 (338-422)||(54086636-54086718)
chr3 (18-131)||(29135896-29136009)
chr3 (21-82)||(51683014-51683075)
chr3 (14-78)||(41219572-41219635)
chr3 (226-292)||(31873886-31873957)
chr3 (32-82)||(928597-928647)
chr3 (14-131)||(10040536-10040652)
chr3 (259-312)||(37781099-37781152)
chr3 (262-306)||(19896994-19897038)
chr3 (245-313)||(52805074-52805142)
chr3 (203-254)||(19912164-19912215)
chr3 (13-120)||(32873571-32873677)
chr3 (203-254)||(38806331-38806382)
chr3 (199-254)||(44276771-44276826)
chr3 (339-390)||(53559723-53559774)
chr3 (254-304)||(1455207-1455257)
chr3 (362-422)||(19897063-19897122)
chr3 (338-376)||(37293539-37293577)
chr3 (200-241)||(198852-198893)
chr3 (198-235)||(37293432-37293469)
chr3 (344-408)||(43750234-43750296)
chr3 (344-409)||(46188862-46188926)
chr3 (254-307)||(53559667-53559720)
chr3 (18-82)||(6462395-6462459)
chr3 (346-409)||(6901660-6901721)
chr3 (18-141)||(25294943-25295067)
chr3 (18-141)||(47219127-47219251)
chr3 (14-82)||(49082803-49082871)
chr3 (254-306)||(52009106-52009158)
chr3 (18-82)||(52364860-52364924)
[»] chr6 (33 HSPs)
chr6 (203-313)||(17942605-17942720)
chr6 (203-307)||(7761468-7761577)
chr6 (203-307)||(8626650-8626759)
chr6 (203-307)||(13757375-13757484)
chr6 (203-313)||(29260354-29260469)
chr6 (203-307)||(1605746-1605855)
chr6 (203-307)||(15064695-15064804)
chr6 (200-287)||(4129614-4129706)
chr6 (210-313)||(8235787-8235895)
chr6 (203-292)||(31559738-31559832)
chr6 (338-422)||(14287071-14287153)
chr6 (201-307)||(30734481-30734592)
chr6 (22-141)||(12606421-12606541)
chr6 (22-141)||(3601075-3601195)
chr6 (18-141)||(13468920-13469044)
chr6 (18-141)||(19089485-19089609)
chr6 (18-82)||(21898635-21898699)
chr6 (254-313)||(3798261-3798320)
chr6 (338-387)||(11370597-11370646)
chr6 (18-131)||(34954629-34954742)
chr6 (18-141)||(6606096-6606220)
chr6 (18-82)||(13584509-13584573)
chr6 (203-254)||(19996322-19996373)
chr6 (338-408)||(8235721-8235791)
chr6 (203-241)||(15064933-15064971)
chr6 (14-112)||(33939994-33940092)
chr6 (344-408)||(1605676-1605738)
chr6 (18-114)||(2271330-2271424)
chr6 (25-141)||(8938705-8938822)
chr6 (21-82)||(14107417-14107478)
chr6 (18-141)||(13036003-13036127)
chr6 (338-405)||(17942545-17942609)
chr6 (339-387)||(26860881-26860929)
[»] scaffold1770 (1 HSPs)
scaffold1770 (200-287)||(349-441)
[»] scaffold0054 (2 HSPs)
scaffold0054 (200-306)||(45622-45733)
scaffold0054 (344-408)||(45551-45613)
[»] scaffold0168 (2 HSPs)
scaffold0168 (203-313)||(7830-7945)
scaffold0168 (338-384)||(7788-7834)
[»] scaffold0062 (1 HSPs)
scaffold0062 (223-306)||(287-375)
[»] scaffold0170 (1 HSPs)
scaffold0170 (18-120)||(9831-9933)
[»] scaffold0939 (1 HSPs)
scaffold0939 (245-306)||(1110-1171)
[»] scaffold0076 (1 HSPs)
scaffold0076 (261-313)||(15386-15438)
[»] scaffold0025 (2 HSPs)
scaffold0025 (237-312)||(65199-65279)
scaffold0025 (366-409)||(65303-65344)
[»] scaffold0635 (1 HSPs)
scaffold0635 (21-88)||(2143-2210)
[»] scaffold0005 (1 HSPs)
scaffold0005 (14-77)||(249369-249432)
[»] scaffold0257 (1 HSPs)
scaffold0257 (200-254)||(23862-23916)


Alignment Details
Target: chr2 (Bit Score: 123; Significance: 5e-63; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 206 - 421
Target Start/End: Complemental strand, 36447532 - 36447313
Alignment:
Q  206 tccctccgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggtttatca 300  Q
    ||||||||||||| ||||| ||||  ||||||||||||||||||||||||||      |||||||||| ||||||||||| |||||||||||||||||||    
T  36447532 tccctccgtttcacaatacatgtcgcttttagagaataattttgtttcactttattcgtcactttcaaatttcaatgcaatgttaattattggtttatca 36447433  T
Q  301 ataatacacttacnnnnnnnnnnnnnnngagagaacacttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtatt 400  Q
    |||||||||||||               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36447432 ataatacacttaccttttttttttttt-gagagaacacttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtatt 36447334  T
Q  401 atagaaaaatacaaagaattt 421  Q
    |||||||||||||||||||||    
T  36447333 atagaaaaatacaaagaattt 36447313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 40756911 - 40757025
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||     || ||||||||||||||||||||||| |||||||||||||||    
T  40756911 tactccctccgtttcataatacttgtccattttggagaataattttgtttcactttagttgtcactttcaagtttcaatgcaacattaattattggttta 40757010  T
Q  298 tcaataatacactta 312  Q
    |||||||||| ||||    
T  40757011 tcaataataccctta 40757025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 22388138 - 22388247
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  22388138 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 22388237  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  22388238 tcaataatac 22388247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 39561895 - 39562005
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacttatcactttcaagtttcaatgcaacgttaattattggtttatcaat 302  Q
    |||||||||||||||| ||||| ||||  |||| ||||||||||||||||||||| ||||||| || |||||||||||| |||||||||||||| |||||    
T  39561895 tactccctccgtttcacaatacatgtcgtttttggagaataattttgtttcacttgtcacttttaaatttcaatgcaacattaattattggtttgtcaat 39561994  T
Q  303 aatacacttac 313  Q
    ||||| |||||    
T  39561995 aatacccttac 39562005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 23367066 - 23366957
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || |||||||||||||||||| |||| ||||||||||  ||     
T  23367066 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatacaacattaattattgtcttg 23366967  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  23366966 tcaataatac 23366957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 1646564 - 1646471
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattatt 291  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||     |||||||||||||||||||||||||||| |||| ||||    
T  1646564 tactccctccgtttcataatacctgtccattttagagaataattttgtttcacaatacttatcactttcaagtttcaatgcaacattaagtatt 1646471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 3519184 - 3519075
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||| ||| ||||||||||  ||     
T  3519184 tacttcctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgtaacattaattattgtcttg 3519085  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  3519084 tcaataatac 3519075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 37673741 - 37673852
Alignment:
Q  201 attactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggtt 295  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||     |||| |||||| |||||||||||||||| ||||||||||  |    
T  37673741 attactccttccgtttcataatacttgtccattttagagaataactttgtttcaaaatacttgtcacttccaagtttcaatgcaacattaattattgtct 37673840  T
Q  296 tatcaataatac 307  Q
    | ||||||||||    
T  37673841 tgtcaataatac 37673852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 203 - 292
Target Start/End: Complemental strand, 1102778 - 1102684
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattg 292  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||     |||  ||||||||||||||||||||||| ||||||||||    
T  1102778 tactccctccgtttcataatacttgtccatttgagagaataattttgtttcacaatactcgtcactttcaagtttcaatgcaacattaattattg 1102684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 200 - 312
Target Start/End: Original strand, 12969737 - 12969854
Alignment:
Q  200 tattactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggt 294  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||     || | || |||||||||||||||||||  ||||||||||      
T  12969737 tattactccctccgtttcataatacttgtccattttggagaataattttgtttcacaatacatgtctctttcaagtttcaatgcaatattaattattgtc 12969836  T
Q  295 ttatcaataatacactta 312  Q
    || |||||||||| ||||    
T  12969837 ttctcaataataccctta 12969854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 39938447 - 39938338
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||     |||| ||||||| |||||| |||||||| ||||||||||  ||     
T  39938447 tactccctccgttttataatacttgtccattttagagaataattttgtttcacaatacttgtcacttttaagttttaatgcaacattaattattgtcttg 39938348  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  39938347 tcaataatac 39938338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 28110151 - 28110210
Alignment:
Q  254 acttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatacacttac 313  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  28110151 acttgtcattttcaagtttcaatgcaacattaattattggtttatcaataatacccttac 28110210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 11069856 - 11069974
Alignment:
Q  13 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 112  Q
    |||| ||||||||| ||| |||||||||| ||||||||  |||  |||||||||||| |||||||||||   |||||  ||||||  |||||| ||||||    
T  11069856 attccaaggacgtacccggggaataccaggttcgattccgagggggaacaacgtttggccagtgcgcatacctctacgcacgagctgaattagtcgtcca 11069955  T
Q  113 ccgttggttggttggaaac 131  Q
    |||||||| ||| ||||||    
T  11069956 ccgttggtgggtcggaaac 11069974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 19976549 - 19976497
Alignment:
Q  254 acttatcactttcaagtttcaatgcaacgttaattattggtttatcaataata 306  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  19976549 acttgtcactttcaagtttcaatgcaacattaattattagtttatcaataata 19976497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 386
Target Start/End: Original strand, 1002842 - 1002890
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatg 386  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||||    
T  1002842 cttatctatttattgtagagagagaaataatagaatgaaataataaatg 1002890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 16034920 - 16034984
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||||||||||||||||||| | ||||||| |||||  |||||||| |||||||||| |||||    
T  16034920 aaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatg 16034984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 18902653 - 18902529
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    |||||||||  || |||||||| | |||||||| || |  |||||||| ||||||||||||| ||| |||||  |||||||| ||||| || ||||| ||    
T  18902653 aaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctctacgcacgagccagattagtcgcccaccttt 18902554  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||| ||||| |||||||||||    
T  18902553 ggtgggtcggaaaccggtgcgaaag 18902529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 390
Target Start/End: Complemental strand, 34242140 - 34242088
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggta 390  Q
    |||||||||||||||||||| || |||||| | ||||||||||||||||||||    
T  34242140 cttacctatttattgtagagagagaaataacataatgaaataataaatgggta 34242088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 37560156 - 37560220
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||| |||||||||||||| ||||||||||| |  ||||||||||||  |||||||||||    
T  37560156 aaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgcatg 37560220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 38962746 - 38962810
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||||| |||||||| | ||||||| |||||| |||||||| ||| ||||||||||||    
T  38962746 aaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatg 38962810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 41187832 - 41187896
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||||||||||||||  |||| ||||| ||||  ||||||| ||||||||||||||||    
T  41187832 aaggacgtatccgaggaataccgaattcaattcttaggaaaaacaacgcttgaccagtgcgcatg 41187896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 41220618 - 41220742
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||| ||| |||||||| | |||||||| ||||| |||||||| ||| ||||||||||||  |||||  | ||||| |||||| ||| |||| ||    
T  41220618 aaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattagtcgttcaccttt 41220717  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
     || ||| ||||| |||||||||||    
T  41220718 agtgggtcggaaaccggtgcgaaag 41220742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 4917927 - 4917880
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaat 385  Q
    ||||||||||||| |||||| || ||||||||||||||||||||||||    
T  4917927 cttacctatttatggtagagtgagaaataatagaatgaaataataaat 4917880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 6358279 - 6358172
Alignment:
Q  13 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 112  Q
    |||| ||||||||||||| ||||||||||||||||||  ||||  |||||||  ||| ||||||||||||  |||||  | |||||  ||||| ||||||    
T  6358279 attcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtcca 6358180  T
Q  113 ccgttggt 120  Q
    || |||||    
T  6358179 ccattggt 6358172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 32838964 - 32839035
Alignment:
Q  238 agaataattttgtttca-----cttatcactttcaagtttcaatgcaacgttaattattggtttatcaataa 304  Q
    |||||||||||||||||     ||| ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  32838964 agaataattttgtttcattttacttgtcactttcaagtttcaatgcaatattaattatttgtttatcaataa 32839035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 331484 - 331597
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||| ||| |||||||| | |||||||| ||||  |||||||  ||| |||||||||||| ||||||  | |||||  ||||| || ||||| ||    
T  331484 aaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttctacgcatgagccggattagtcgcccaccttt 331583  T
Q  118 ggttggttggaaac 131  Q
    ||| ||||||||||    
T  331584 ggtgggttggaaac 331597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 12969857 - 12969919
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    |||||||||||||| || ||| |||||||| |||||||||||||   ||||||||||||||||||    
T  12969857 tatttattgtagagagagaaaaaatagaataaaataataaatgg--ttaagggtattatagaaaa 12969919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 387
Target Start/End: Complemental strand, 18078221 - 18078172
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgg 387  Q
    |||| ||||||||||||||| || ||||||||||||||| ||||||||||    
T  18078221 cttaactatttattgtagagagaaaaataatagaatgaattaataaatgg 18078172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 422
Target Start/End: Complemental strand, 24777827 - 24777749
Alignment:
Q  343 ctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattat-agaaaaatacaaagaatttc 422  Q
    ||||||||| ||||| || ||||||||||||||||||||||||    ||||||||||||| | ||||| ||||||||||||    
T  24777827 ctatttattctagagagaaaaataatagaatgaaataataaat--aaataagggtattataaaaaaaacacaaagaatttc 24777749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 25540532 - 25540403
Alignment:
Q  13 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 112  Q
    |||| ||||||||||| | |||||||  | ||||||||  |||  |||||||| ||| ||||||||||||  |||||  |||||||  ||||| ||||||    
T  25540532 attccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtcca 25540433  T
Q  113 ccgttggttggttggaaa-cggtgcgaaag 141  Q
    || ||||| ||| ||||| |||||||||||    
T  25540432 cctttggtgggtcggaaaccggtgcgaaag 25540403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 37284525 - 37284632
Alignment:
Q  209 ctccgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggtttatcaata 303  Q
    |||||||||| ||||||| ||  |||| |||||||||||||||||||||      ||| ||||||||||||||||||| || ||||||| ||||||| ||    
T  37284525 ctccgtttcacaatactt-tctcttttggagaataattttgtttcactttacttgtcattttcaagtttcaatgcaacatt-attattgatttatcacta 37284622  T
Q  304 atacacttac 313  Q
    |||| |||||    
T  37284623 atactcttac 37284632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 7747257 - 7747321
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||||| |||||||| | ||||||||  |||| |||||||||||| |||||| |||||    
T  7747257 aaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatg 7747321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 10823043 - 10823167
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||| ||| |||||||| | || ||||| ||||| |||||||| ||| ||||||||||||  |||||  |||||||  ||||| || ||||| ||    
T  10823043 aaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttt 10823142  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
     || ||| ||||| |||||||||||    
T  10823143 tgtgggtcggaaaccggtgcgaaag 10823167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 14169732 - 14169608
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    |||||||||| || |||||| | | |||||||||| ||  |||||||  ||||||||||||||||| |||||  | |||||  ||||| |||| ||| ||    
T  14169732 aaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctaccatt 14169633  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||| ||||| |||||||||||    
T  14169632 ggtgggtcggaaaccggtgcgaaag 14169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 14853490 - 14853430
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcg 78  Q
    ||||| ||||||| |||||||||||||||||| |||||  ||||||| |||| ||||||||    
T  14853490 aaggatgtatccggggaataccagattcgattttcagggggaacaacttttggccagtgcg 14853430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 15234184 - 15234120
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||| ||| ||||||| || |||||||||||||  |||||||  ||||||||||||||||    
T  15234184 aaggacgtacccggggaatactaggttcgattctcagggggaacaacacttgaccagtgcgcatg 15234120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 21286427 - 21286491
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||||| |||||||| | |||||||| ||||   ||||||| ||||||||||||||||    
T  21286427 aaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcatg 21286491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 42770774 - 42770710
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||||||| |||||| | ||| |||||||||  |||||||| ||| ||||||||||||    
T  42770774 aaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatg 42770710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 10106574 - 10106641
Alignment:
Q  21 gacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttcta 88  Q
    |||||||||||| |||||| |||||||||||||| | |||||||| ||||  || ||||||| |||||    
T  10106574 gacgtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttcta 10106641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 19976930 - 19976859
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctac 89  Q
    ||||||||||||| |||||||| | ||||||| |||||  ||| ||||||||  |||||||||||| |||||    
T  19976930 aaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgcatgtctctac 19976859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 32840284 - 32840351
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaa 407  Q
    ||||| |||||||| || || || |||||||||||||||||||||||| |  |||| |||||||||||||    
T  32840284 cttacttatttattttacagagagaaataatagaatgaaataataaatcg--ataatggtattatagaaa 32840351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 142
Target Start/End: Original strand, 35946717 - 35946846
Alignment:
Q  13 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 112  Q
    |||||||||||||||||| ||||||||   ||||||||  |||  |||||||| ||| ||| || |||||  |||||  |||||||  ||||| ||||||    
T  35946717 attctaaggacgtatccggggaataccgagttcgattcctagg-ggaacaacgcttggccattgtgcatgcctctacgcacgagccggattagtcgtcca 35946815  T
Q  113 ccgttggttggttggaaac-ggtgcgaaagg 142  Q
    || ||||| ||| |||||| |||||||||||    
T  35946816 ccattggtgggtcggaaactggtgcgaaagg 35946846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 1102661 - 1102600
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    |||||||||||||| || ||| |||| ||||||||||||||||| ||  ||||||||||||||||    
T  1102661 tatttattgtagagagaaaaa-aataaaatgaaataataaatggtta--agggtattatagaaaa 1102600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 10026723 - 10026626
Alignment:
Q  34 aataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggttggttggaaac 131  Q
    |||||| | |||||||||||||  |||||||||||| ||||||||||||  |||||  | |||||  ||||| || ||||| ||||| ||| ||||||    
T  10026723 aataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10026626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 39201631 - 39201518
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    |||||||||  |||||||||||  ||||||||||||||  |||||| ||||| |||||| |||||  |||||  | |||||  ||||| ||| |||| ||    
T  39201631 aaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcaccttt 39201532  T
Q  118 ggttggttggaaac 131  Q
    ||| ||| ||||||    
T  39201531 ggtgggtcggaaac 39201518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 2550851 - 2550975
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||| | | |||||||| ||||| |||||||  ||  ||||||||||||| |||||  | |||||  ||||| || ||||  ||    
T  2550851 aaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctctacgcatgagccggattagtcgcccactttt 2550950  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||||| ||| |||||||||||    
T  2550951 ggtgggttgaaaaccggtgcgaaag 2550975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 28401396 - 28401444
Alignment:
Q  259 tcactttcaagtttcaatgcaacgttaattattggtttatcaataatac 307  Q
    ||||||||||||||||| || || |||||||||| ||| ||||||||||    
T  28401396 tcactttcaagtttcaaggccacattaattattgatttgtcaataatac 28401444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 141
Target Start/End: Complemental strand, 34130408 - 34130301
Alignment:
Q  34 aataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggttggttggaaa-cg 132  Q
    |||| ||| ||||||| |||||| |||||||||||||||| ||| ||||| |||||  | |||||| ||||| |||| ||| ||||| | | ||||| ||    
T  34130408 aatatcaggttcgattttcagga-gaacaacgtttgaccattgcacatgtctctacgcatgagccagattagtcgtctaccattggtagatcggaaatcg 34130310  T
Q  133 gtgcgaaag 141  Q
    |||||||||    
T  34130309 gtgcgaaag 34130301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 39807008 - 39806944
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||| ||| |||||||| | |||||||| || ||  ||||||||||| ||||||||||||    
T  39807008 aaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatg 39806944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 9e-37; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 7736845 - 7737042
Alignment:
Q  8 agattattctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagcc 107  Q
    |||| |||||||||||||| |||||||||| |   ||||||||||||||| |||||||||||  |||||| ||| | ||||||||| || || |||||||    
T  7736845 agatcattctaaggacgtacccgaggaatatcgagttcgattctcaggacaaacaacgtttggtcagtgcacatatctctacttacaagtcagattagcc 7736944  T
Q  108 gtccaccgttggttggttggaaa-cggtgcgaaaggnnnnnnnnncaatttgaatcattggaagtatggtttttctaaccatttcaagtgggatatta 204  Q
    ||| ||||||||||| ||||||| |||||||||||           || |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7736945 gtcgaccgttggttgattggaaaccggtgcgaaagaaaaaataaaaaaattgaatcattggaagtatgggttttctaaccatttcaagtgggatatta 7737042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 25683229 - 25683344
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||     |||| ||||||||||||||||||||||| |||||||||| |||     
T  25683229 tactccctccgtttcataatacttgtccattttggagaataattttgtttcataaaacttgtcactttcaagtttcaatgcaacattaattattgttttg 25683328  T
Q  298 tcaataatacacttac 313  Q
    |||||||||| |||||    
T  25683329 tcaataatacccttac 25683344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 40886610 - 40886719
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  40886610 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 40886709  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  40886710 tcaataatac 40886719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 734339 - 734454
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||||||||||||      |||||||||||||||||| |||| |||||||||||||||    
T  734339 tactcccaccgtttcacaatacttgtccattttggagaataattttgtttcactttacttgtcactttcaagtttcaatacaacattaattattggttta 734438  T
Q  298 tcaataatacacttac 313  Q
    |||||||||| |||||    
T  734439 tcaataatactcttac 734454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 12806853 - 12806962
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || || |||||||||||||||||||| ||||||||||  ||     
T  12806853 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtctctttcaagtttcaatgcaacattaattattgtcttg 12806952  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  12806953 tcaataatac 12806962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 25773926 - 25773817
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||     |||||||||||||||||||||||||||| ||||||||||  ||     
T  25773926 tactctctccgtttcataatacttgtccattttagagaataagtttgtttcacaatacttatcactttcaagtttcaatgcaacattaattattgtcttg 25773827  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  25773826 tcaataatac 25773817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 30720492 - 30720601
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||| ||||||  ||     
T  30720492 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattagttattgtcttg 30720591  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  30720592 tcaataatac 30720601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 36561099 - 36561208
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| |||| |||||  ||     
T  36561099 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaagtattgtcttg 36561198  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  36561199 tcaataatac 36561208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 10285058 - 10285167
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  10285058 tactccctccgtttcataatacttgtctattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 10285157  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  10285158 tcaataatac 10285167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 11319826 - 11319718
Alignment:
Q  210 tccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtttatcaataa 304  Q
    |||||||||||||||||||| |||||||||||||||||||||||||     |||||||||||| |||| |||||||  |||||||||||||||| |||||    
T  11319826 tccgtttcataatacttgtctattttagagaataattttgtttcactttatttatcactttcaggttttaatgcaatattaattattggtttattaataa 11319727  T
Q  305 tacacttac 313  Q
    ||| |||||    
T  11319726 tactcttac 11319718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 203 - 312
Target Start/End: Original strand, 1056625 - 1056737
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcactta---tcactttcaagtttcaatgcaacgttaattattggtttatc 299  Q
    |||||||||||||||| ||||||||||  |||| |||||||||||| ||||| |||   ||||||||||||||||||||||| ||||||||| |||| ||    
T  1056625 tactccctccgtttcacaatacttgtcacttttggagaataattttatttcaattactatcactttcaagtttcaatgcaacattaattattagtttgtc 1056724  T
Q  300 aataatacactta 312  Q
    |||||||| ||||    
T  1056725 aataatactctta 1056737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 37900623 - 37900732
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| |||||||||||||||||||| |||||  ||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  37900623 tactccttccgtttcataatacttgtctattttgaagaataattttgtttcacgatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 37900722  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  37900723 tcaataatac 37900732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 39071153 - 39071044
Alignment:
Q  209 ctccgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggtttatcaata 303  Q
    ||||| |||| |||||||||| ||||| |||||||||||||||||||||      ||||||| |||| |||||||||| |||||||||||||||||||||    
T  39071153 ctccgattcacaatacttgtctatttttgagaataattttgtttcactttacttgtcacttttaagtatcaatgcaacattaattattggtttatcaata 39071054  T
Q  304 atacacttac 313  Q
    || |||||||    
T  39071053 atccacttac 39071044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 11795314 - 11795398
Alignment:
Q  234 ttagagaataattttgtttcactt-----atcactttcaagtttcaatgcaacgttaattattggtttatcaataatacacttac 313  Q
    ||||||||||||||||||||||||     |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  11795314 ttagagaataattttgtttcactttatttatcactttcaagtttcaatgcaacattaattataggtttatcaataatactcttac 11795398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 23097724 - 23097839
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||     |||| | ||||||| ||||||||||||  ||||||||||  ||     
T  23097724 tactccttccgtttcataatacttgtccattttggagaataattttgtttcacaatacttgttactttcatgtttcaatgcaatattaattattgtcttg 23097823  T
Q  298 tcaataatacacttac 313  Q
    |||||||||| |||||    
T  23097824 tcaataatacccttac 23097839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 336 - 409
Target Start/End: Complemental strand, 39071050 - 39070979
Alignment:
Q  336 cacttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||| |  |||||||||||||||||||    
T  39071050 cacttacctatttattgtagagagagaaataatagaatgaaataataaatgag--taagggtattatagaaaaa 39070979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 422
Target Start/End: Original strand, 734450 - 734532
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaatacaaagaatttc 422  Q
    ||||||||| |||| ||||| || ||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||    
T  734450 cttacctatatattatagagagaaaaataatagaatgaaataataaatgag--taagggtattatagaaaaacacaaagaatttc 734532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 42086311 - 42086435
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||| |||||||||||| | |||||||| ||||  |||||||| ||||||||||||||||  |||||  | |||||  ||||| |||||||| ||    
T  42086311 aaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaccttt 42086410  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||| ||||| |||||||||||    
T  42086411 ggtgggtcggaaaccggtgcgaaag 42086435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 11319722 - 11319641
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatag-aaaaatacaaagaatttc 422  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||| |  |||||||||||||| ||||| ||||||||||||    
T  11319722 cttacctatttattgtagagaga--aataatagaatgaaataataaatgag--taagggtattatagaaaaaaaacaaagaatttc 11319641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 16983532 - 16983425
Alignment:
Q  205 ctccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtttatc 299  Q
    ||||||| |||| |||||||||||| |||||  ||||||||||||||||||     || ||||||| ||||||||||||||| ||||||||||  || ||    
T  16983532 ctccctctgttttataatacttgtctattttgaagaataattttgtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtcttttc 16983433  T
Q  300 aataatac 307  Q
    ||||||||    
T  16983432 aataatac 16983425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 12081892 - 12081994
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||||  | |||||||||||||  |||||||| ||| ||||||||||||  |||||  ||||||| |||||| |||||||| ||    
T  12081892 aaggacgtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccaccttt 12081991  T
Q  118 ggt 120  Q
    |||    
T  12081992 ggt 12081994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 5732043 - 5731919
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||| ||| |||||||| | |||||||| ||||| |||||||| ||| ||||||||||||  ||||| || |||||| ||||| ||| |||| ||    
T  5732043 aaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgtatgagccagattagtcgttcaccttt 5731944  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
     || ||| ||||| |||||||||||    
T  5731943 agtgggtcggaaaccggtgcgaaag 5731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 21149718 - 21149782
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||  |||||||||||| ||||||| |||||  |||||||||||||||||||||||||    
T  21149718 aaggacgtatttgaggaataccaggttcgattttcagggggaacaacgtttgaccagtgcgcatg 21149782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 312
Target Start/End: Complemental strand, 16054377 - 16054274
Alignment:
Q  214 tttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggtttatcaataataca 308  Q
    ||||| ||||| ||||  |||| ||||||||||||| |||||||      ||||||||||||||||||||||| ||||||||| |||| ||||||||||     
T  16054377 tttcaaaatacatgtcgcttttggagaataattttggttcactttggttgtcactttcaagtttcaatgcaacattaattattagtttgtcaataatacc 16054278  T
Q  309 ctta 312  Q
    ||||    
T  16054277 ctta 16054274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 24875322 - 24875409
Alignment:
Q  11 ttattctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagcc 98  Q
    |||||| ||||||||| || | ||||| ||| ||||||||| |||  |||||||||||||||||||||||||| |||||  |||||||    
T  24875322 ttattccaaggacgtacccaaagaatatcaggttcgattcttagggagaacaacgtttgaccagtgcgcatgtctctacgcacgagcc 24875409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 26168185 - 26168076
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| |||||||||  |||| ||||  ||||||||||||||||||||||||     || ||||||||||||||||||||||  ||||| ||| ||||     
T  26168185 tactccttccgtttcacgatacatgtcgtttttagagaataattttgtttcactttaattgtcactttcaagtttcaatgcaagattaatgatttgtttg 26168086  T
Q  298 tcaataatac 307  Q
    | ||||||||    
T  26168085 ttaataatac 26168076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 25467390 - 25467458
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||||||||||| | |||||||| |||||||||| |||||| |||||||| ||| ||||| ||||||    
T  25467390 ttctaaggacgtatacaaggaatactagattcgattttcaggaggaacaacgattggccagtacgcatg 25467458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 408
Target Start/End: Original strand, 25683340 - 25683408
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    ||||| |||||||||||||| || ||| |||||||| |||||||||||||   ||||||||||||||||||    
T  25683340 cttacatatttattgtagagagagaaaaaatagaataaaataataaatgg--ttaagggtattatagaaaa 25683408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 30402981 - 30403076
Alignment:
Q  222 tacttgtccattttagagaataattttgtttca-----cttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatacactta 312  Q
    ||||||||  ||||||||||||||||| |||||     ||| ||||||| |||||||||| |||  |||||||||||||| |||||||||| ||||    
T  30402981 tacttgtcgcttttagagaataattttatttcattttacttgtcacttttaagtttcaatacaaaattaattattggtttgtcaataataccctta 30403076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 429
Target Start/End: Original strand, 1056397 - 1056483
Alignment:
Q  339 ttacctatttattgtagagggataaataatagaatgaaataataaatgggtat-aagggtattatagaaaaatacaaagaatttcgttaaaa 429  Q
    ||||||||||||||||||| ||  ||||||| ||||||||||||||||   || ||  |||||||||||||| |||||||||||| ||||||    
T  1056397 ttacctatttattgtagagaga--aataatataatgaaataataaatg---atcaatagtattatagaaaaacacaaagaatttcattaaaa 1056483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 387
Target Start/End: Complemental strand, 16054277 - 16054228
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgg 387  Q
    |||| ||||||||||||||| || |||||||||||| |||||||||||||    
T  16054277 cttatctatttattgtagagagagaaataatagaataaaataataaatgg 16054228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 14588740 - 14588638
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||| | |||||| | | ||||||| |||||| ||| |||| ||||||||||||||||  |||||  | |||||  ||||| |||||||| ||    
T  14588740 aaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaccttt 14588641  T
Q  118 ggt 120  Q
    |||    
T  14588640 ggt 14588638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 7866565 - 7866678
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||| |||||||||||| | ||||||||  |||| |||||||| ||| |||||| |||||  |||||  |||| ||  ||||| || ||||| ||    
T  7866565 aaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgcccaccttt 7866664  T
Q  118 ggttggttggaaac 131  Q
    ||| |||| |||||    
T  7866665 ggtgggttagaaac 7866678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 9805003 - 9805112
Alignment:
Q  33 gaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggttggttggaaac- 131  Q
    ||||||| | |||||||| ||||  |||||||| ||| ||||||||||||  |||||  | |||||  ||||| |||||||| ||||| ||| ||||||     
T  9805003 gaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaca 9805102  T
Q  132 ggtgcgaaag 141  Q
    ||||||||||    
T  9805103 ggtgcgaaag 9805112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 19572708 - 19572821
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||||| | || ||||| ||||  |||||||  ||| ||||||||||||  |||||  | |||||  ||||| ||| |||| ||    
T  19572708 aaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccatt 19572807  T
Q  118 ggttggttggaaac 131  Q
    ||| ||||||||||    
T  19572808 ggtgggttggaaac 19572821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 30720772 - 30720731
Alignment:
Q  200 tattactccctccgtttcataatacttgtccattttagagaa 241  Q
    ||||||||||||||||||| ||||| |||||||||| |||||    
T  30720772 tattactccctccgtttcaaaatacatgtccattttggagaa 30720731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 37263221 - 37263320
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 113  Q
    ||||||||||||| ||| |||||| | | |||||||||||||  |||||||| ||| ||| ||||||||  |||||  |||||||  ||||| |||||||    
T  37263221 ttctaaggacgtacccggggaatatcgggttcgattctcagg-ggaacaacgcttggccaatgcgcatgcctctacgcacgagccggattagtcgtccac 37263319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 8e-34; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 199 - 307
Target Start/End: Original strand, 40918727 - 40918840
Alignment:
Q  199 atattactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||     
T  40918727 atattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgt 40918826  T
Q  294 tttatcaataatac 307  Q
     || ||||||||||    
T  40918827 cttgtcaataatac 40918840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 7147190 - 7147081
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  7147190 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 7147091  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  7147090 tcaataatac 7147081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 11646325 - 11646434
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||     |||| ||||||||||||||||||||||| ||||||||||  ||     
T  11646325 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttg 11646424  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  11646425 tcaataatac 11646434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 36068357 - 36068248
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||     |||| ||||||||||||||||||||||| ||||||||||  ||     
T  36068357 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttg 36068258  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  36068257 tcaataatac 36068248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 40058303 - 40058412
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  40058303 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 40058402  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  40058403 tcaataatac 40058412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 30999524 - 30999633
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||     |||| | ||||||||||||||||||||| ||||||||||  ||     
T  30999524 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgttactttcaagtttcaatgcaacattaattattgtcttg 30999623  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  30999624 tcaataatac 30999633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 43275399 - 43275492
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattatt 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| |||||||||    
T  43275399 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattatt 43275492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 35866890 - 35866775
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttca-----cttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||||||||||||     ||| |||||||||||||||||| |||| |||||||||||||||    
T  35866890 tactccatccgtttcacaatacttgtctattttggagaataattttgtttcattttacttgtcactttcaagtttcaattcaacattaattattggttta 35866791  T
Q  298 tcaataatacacttac 313  Q
    |||||||||| |||||    
T  35866790 tcaataatactcttac 35866775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 202 - 307
Target Start/End: Complemental strand, 37345849 - 37345739
Alignment:
Q  202 ttactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttt 296  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||     || ||| ||||||||||||||||||| ||||||||||  ||    
T  37345849 ttactccttccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcattttcaagtttcaatgcaacattaattattgtctt 37345750  T
Q  297 atcaataatac 307  Q
     ||||||||||    
T  37345749 gtcaataatac 37345739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 2539930 - 2540039
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  2539930 tactccttccgtttcataatacttgtccattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 2540029  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  2540030 tcaataatac 2540039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 3585728 - 3585619
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||     |||| ||||||||||||||||||||||| ||||||||||  ||     
T  3585728 tactccatccgtttcataatacttgtctattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttg 3585629  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  3585628 tcaataatac 3585619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 11174223 - 11174332
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  11174223 tactccctccgtttcataatacttgttcattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 11174322  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  11174323 tcaataatac 11174332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 27035272 - 27035157
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  27035272 tactgcctccgtttcataatacttgttcattttggagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 27035173  T
Q  298 tcaataatacacttac 313  Q
    |||||||||| |||||    
T  27035172 tcaataatacccttac 27035157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 28568195 - 28568080
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttca-----cttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||| ||||| |||||||||||||||| |||||| |||||||||||     ||| ||||||| ||||||||||||||| |||||||||||||||    
T  28568195 tactccctccatttcacaatacttgtccattttggagaattattttgtttcattttacttgtcactttgaagtttcaatgcaacattaattattggttta 28568096  T
Q  298 tcaataatacacttac 313  Q
    |||||| ||| |||||    
T  28568095 tcaatattacccttac 28568080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 28575788 - 28575673
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttca-----cttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||| ||||| |||||||||||||||| |||||| |||||||||||     ||| ||||||| ||||||||||||||| |||||||||||||||    
T  28575788 tactccctccatttcacaatacttgtccattttggagaattattttgtttcattttacttgtcactttgaagtttcaatgcaacattaattattggttta 28575689  T
Q  298 tcaataatacacttac 313  Q
    |||||| ||| |||||    
T  28575688 tcaatattacccttac 28575673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 28562698 - 28562583
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttca-----cttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||| ||| ||||||| ||||||||  ||||| |||||||||||     ||| ||||||||||||||||||||||| |||||||||||||||    
T  28562698 tactccctccgtctcacaatacttatccattttgaagaattattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggttta 28562599  T
Q  298 tcaataatacacttac 313  Q
    |||||| ||| |||||    
T  28562598 tcaatattactcttac 28562583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 306
Target Start/End: Original strand, 45400767 - 45400878
Alignment:
Q  200 tattactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggt 294  Q
    |||||||||||||||||||||||||  |||  |||| |||||||||||||||||||     || ||||||| || |||||||||||| |||||||||  |    
T  45400767 tattactccctccgtttcataatacaagtcgtttttggagaataattttgtttcactttatttgtcacttttaaatttcaatgcaacattaattattaat 45400866  T
Q  295 ttatcaataata 306  Q
    ||||||||||||    
T  45400867 ttatcaataata 45400878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 26628822 - 26628931
Alignment:
Q  209 ctccgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggtttatcaata 303  Q
    |||||||||| ||||| |||   |||| |||||||||||||||||||||      ||| ||||||||||||||||||| |||||||||| ||||||||||    
T  26628822 ctccgtttcacaatacatgttgcttttggagaataattttgtttcactttatttgtcattttcaagtttcaatgcaacattaattattgatttatcaata 26628921  T
Q  304 atacacttac 313  Q
    |||| |||||    
T  26628922 atacccttac 26628931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 20546308 - 20546408
Alignment:
Q  218 ataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatacactta 312  Q
    ||||||||||||||||||  ||||||||||||||||||     || ||||||||| ||||||||||||| ||||||||||  || |||||||||| ||||    
T  20546308 ataatacttgtccattttgaagaataattttgtttcacaatacttgtcactttcaggtttcaatgcaacattaattattgtcttgtcaataataccctta 20546407  T
Q  313 c 313  Q
    |    
T  20546408 c 20546408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 26628927 - 26628997
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaat---gggtataagggtattatagaaa 407  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||   |||||  |||||||||||||||    
T  26628927 cttacctatttattgtagagagagaaataatagaatgaaataataaattatgggta--agggtattatagaaa 26628997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 35866779 - 35866696
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatag-aaaaatacaaagaatttc 422  Q
    ||||| ||| |||||||||| || |||||||||||| |||||||||||  || |||||||||||||| ||||| ||||||||||||    
T  35866779 cttacatatctattgtagagagagaaataatagaataaaataataaat--gtttaagggtattatagaaaaaacacaaagaatttc 35866696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 313
Target Start/End: Original strand, 27563885 - 27563982
Alignment:
Q  221 atacttgtccattttagagaataattttgtttca-----cttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatacacttac 313  Q
    |||||||||  |||| ||||| ||||||||||||     ||| ||||||||||||||||||||||| ||||||||||  || |||||||||| |||||    
T  27563885 atacttgtcgcttttggagaacaattttgtttcatattacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataatacccttac 27563982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 6100459 - 6100523
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||||| |||||||| | |||||||| ||||| |||||||| ||| ||||||||||||    
T  6100459 aaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatg 6100523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 27035161 - 27035094
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaa 407  Q
    ||||| |||||| ||||||| || ||| ||||||||||||||||||||||   |||||||||||||||||    
T  27035161 cttacatatttactgtagagagagaaaaaatagaatgaaataataaatgg--ttaagggtattatagaaa 27035094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 18374004 - 18374061
Alignment:
Q  25 tatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||| | |||||||| |||||||||||||  |||||||| ||||||||||||||||    
T  18374004 tatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatg 18374061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 28568084 - 28568016
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    |||||||||||||||| ||| || ||||||| |||||||||||||||||   |  |||||||||||||||||    
T  28568084 cttacctatttattgttgagagagaaataattgaatgaaataataaatg---agcagggtattatagaaaaa 28568016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 28575677 - 28575609
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    |||||||||||||||| ||| || ||||||| |||||||||||||||||   |  |||||||||||||||||    
T  28575677 cttacctatttattgttgagagagaaataattgaatgaaataataaatg---agcagggtattatagaaaaa 28575609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 28562587 - 28562518
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    |||||||||||||| | ||| || ||||||| ||||||||| ||||||| |  |||||||||||||||||||    
T  28562587 cttacctatttatttttgagagagaaataattgaatgaaatcataaatgag--taagggtattatagaaaaa 28562518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 45278758 - 45278716
Alignment:
Q  199 atattactccctccgtttcataatacttgtccattttagagaa 241  Q
    |||||||||||||||||||| ||||| |||||||||| |||||    
T  45278758 atattactccctccgtttcaaaatacatgtccattttggagaa 45278716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 409
Target Start/End: Original strand, 13881073 - 13881135
Alignment:
Q  345 atttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    ||||||||||||| || || ||||| |||||||||||||||  |  |||||||||||||||||||    
T  13881073 atttattgtagagagagaactaatataatgaaataataaat--gattaagggtattatagaaaaa 13881135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 14666199 - 14666070
Alignment:
Q  13 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 112  Q
    |||| ||||||||||||| |||||||| | |||||||| ||||   ||||||  ||| ||||||||||||  |||||  || ||||| ||||| || |||    
T  14666199 attccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcacaagccagattagtcgccca 14666100  T
Q  113 ccgttggttggttggaaa-cggtgcgaaag 141  Q
    | |||||| ||| | ||| |||||||||||    
T  14666099 cagttggtgggtcgaaaaccggtgcgaaag 14666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 30999641 - 30999703
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    |||||||||||||| || ||| |||| |||||||||||||||  |  ||||||||||||||||||    
T  30999641 tatttattgtagagagagaaaaaataaaatgaaataataaat--gattaagggtattatagaaaa 30999703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 10535526 - 10535403
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    |||||||||||||||||||||  | ||| ||| |||||  ||||| || ||||||||||||||||| || ||  | ||||| |||||| ||| |||| ||    
T  10535526 aaggacgtatccgaggaatacatggttcaattttcagg-ggaacaccgcttgaccagtgcgcatgtctccacgcatgagccgaattagtcgttcaccttt 10535428  T
Q  118 ggttggttggaaac-ggtgcgaaag 141  Q
    |||  || |||||| ||||||||||    
T  10535427 ggtaagtcggaaactggtgcgaaag 10535403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 10927593 - 10927657
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||| ||| |||||||| | ||||||||  |||| |||||||| ||| ||||||||||||    
T  10927593 aaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatg 10927657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 13881011 - 13881063
Alignment:
Q  254 acttatcactttcaagtttcaatgcaacgttaattattggtttatcaataata 306  Q
    |||| ||||||||||||||||||||||  |||||||||| ||| | |||||||    
T  13881011 acttgtcactttcaagtttcaatgcaatattaattattgatttgttaataata 13881063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 14846559 - 14846686
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 113  Q
    ||||||||||||| ||| |||||||| | |||||||||||||  |||||| | |||  |||||||||||  |||||  | ||| || || || |||||||    
T  14846559 ttctaaggacgtacccggggaataccgggttcgattctcagg-ggaacaatgattggtcagtgcgcatgcctctacgcatgagtcagataagtcgtccac 14846657  T
Q  114 cgttggttggttggaaa-cggtgcgaaag 141  Q
    | ||||| ||| ||||| |||||||||||    
T  14846658 ctttggtgggtcggaaatcggtgcgaaag 14846686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 27034995 - 27035035
Alignment:
Q  201 attactccctccgtttcataatacttgtccattttagagaa 241  Q
    |||||||||||||||||| ||||| |||||||||| |||||    
T  27034995 attactccctccgtttcaaaatacatgtccattttggagaa 27035035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 8e-34; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 284610 - 284501
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||     |||| ||||||||||||||||||||||| ||||||||||  |||    
T  284610 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgactta 284511  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  284510 tcaataatac 284501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 51064754 - 51064869
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| || |||||| ||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||| |||||    
T  51064754 tactccgtctgtttcacaatacttgtccattttagagaataattttgtttcactttatttgtcactttcaagtttcaatgcaacgttaattattagttta 51064853  T
Q  298 tcaataatacacttac 313  Q
    |||||||||| |||||    
T  51064854 tcaataatacccttac 51064869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 40783657 - 40783766
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  40783657 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 40783756  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  40783757 tcaataatac 40783766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 307
Target Start/End: Complemental strand, 321904 - 321794
Alignment:
Q  202 ttactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttt 296  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||     || ||||||||||||||||||||||| ||||||||||  ||    
T  321904 ttactccctccgtttcataatacttgtccattttagagaatatttttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtctt 321805  T
Q  297 atcaataatac 307  Q
     ||||||||||    
T  321804 gtcaataatac 321794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 23045279 - 23045388
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || || |||||||||||||||||||| ||||||||||  ||     
T  23045279 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttg 23045378  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  23045379 tcaataatac 23045388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 23526516 - 23526401
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  23526516 tactccctccgtttcataatacttgtccattttgaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 23526417  T
Q  298 tcaataatacacttac 313  Q
    |||||||||| |||||    
T  23526416 tcaataatacccttac 23526401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 24771906 - 24772014
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||     || | || |||||||||||||||||||  |||||||||| |||     
T  24771906 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacatgtctctttcaagtttcaatgcaatattaattattgttttt 24772005  T
Q  298 tcaataata 306  Q
    |||||||||    
T  24772006 tcaataata 24772014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 47037852 - 47037961
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgttt-----cacttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||      |||| ||||||||||||||||||||||| ||||||||||  ||     
T  47037852 tactccctccgtttcataatacttgtctattttaaagaataattttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 47037951  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  47037952 tcaataatac 47037961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 33083026 - 33082907
Alignment:
Q  198 gatattactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattg 292  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||     || | || ||||||| |||||||||||  ||||||||||    
T  33083026 gataatactccctccgtttcataatacttgtccattttaaagaataattttgtttcacaatacatgtctctttcaaatttcaatgcaatattaattattg 33082927  T
Q  293 gtttatcaataatacactta 312  Q
      || |||||||||| ||||    
T  33082926 tcttctcaataataccctta 33082907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 46771910 - 46771800
Alignment:
Q  208 cctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggtttatcaat 302  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||     |||||||||||||||||||||||| ||| |||||||||   || |||||    
T  46771910 cctccgtttcataatacttgttcattttgaagaataattttgtttcacaatacttatcactttcaagtttcaatgtaacattaattattttcttgtcaat 46771811  T
Q  303 aatacacttac 313  Q
    ||||| |||||    
T  46771810 aatactcttac 46771800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 312
Target Start/End: Original strand, 23166858 - 23166965
Alignment:
Q  210 tccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtttatcaataa 304  Q
    ||||||||| |||||| |||  ||||||||||||||||||||||||     |||| |||||||||||||||| |||| |||||||||| ||| |||||||    
T  23166858 tccgtttcacaatactcgtcgcttttagagaataattttgtttcacattatttattactttcaagtttcaatacaacattaattattgatttgtcaataa 23166957  T
Q  305 tacactta 312  Q
    ||| ||||    
T  23166958 tactctta 23166965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 24876831 - 24876723
Alignment:
Q  210 tccgtttcataatacttgtccattttagagaataattttgtttca-----cttatcactttcaagtttcaatgcaacgttaattattggtttatcaataa 304  Q
    ||||| ||| ||||||||||  |||| ||||||||||||||||||     ||| |||||||||||| ||||||| || |||||||||||||| |||||||    
T  24876831 tccgtctcacaatacttgtcgtttttggagaataattttgtttcattttacttgtcactttcaagtgtcaatgcgacattaattattggtttgtcaataa 24876732  T
Q  305 tacacttac 313  Q
    ||| |||||    
T  24876731 tactcttac 24876723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 409
Target Start/End: Original strand, 31003898 - 31003967
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||   |||||||||||||||||||    
T  31003898 cttacctatttattgtagagagagaaataatagaattaaataataaatgg--ttaagggtattatagaaaaa 31003967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 313
Target Start/End: Original strand, 40261320 - 40261400
Alignment:
Q  238 agaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatacacttac 313  Q
    ||||||||||||||||||     || ||||||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  40261320 agaataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattggtttgtcaataatacccttac 40261400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 27210961 - 27211064
Alignment:
Q  209 ctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtttatcaata 303  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||||     || |||| || ||||||||||||||| ||||||||||  || ||||||    
T  27210961 ctccgtttcataatatttgtccatttttaagaataattttgtttcacaatacttgtcacatttaagtttcaatgcaacattaattattgtcttgtcaata 27211060  T
Q  304 atac 307  Q
    ||||    
T  27211061 atac 27211064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 31003787 - 31003902
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||||||| |||||| ||||||| ||  |||| |||||||||||||||||||     ||  |||||||||||||||||||||| |||||| |||||||     
T  31003787 tactccctctgtttcacaatacttatcgcttttggagaataattttgtttcacattacttgccactttcaagtttcaatgcaacattaattgttggtttg 31003886  T
Q  298 tcaataatacacttac 313  Q
    || ||||||| |||||    
T  31003887 tccataatacccttac 31003902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 34458724 - 34458839
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| ||||||||| ||||  ||||  |||| |||||||||||||||||||||      ||||||||||||||| ||||||| |||||||||||||||    
T  34458724 tactccttccgtttcacaatatatgtcgcttttggagaataattttgtttcactttacttgtcactttcaagtttcgatgcaacattaattattggttta 34458823  T
Q  298 tcaataatacacttac 313  Q
     | ||||||| |||||    
T  34458824 ccgataatacccttac 34458839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 27143014 - 27143127
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacttatcactt-----tcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| |||| ||||||||| |||||  |||| |||||||||||||||||||  || ||||     |||||||||||| |||| ||||||||||||||     
T  27143014 tactccatccgcttcataataattgtcgcttttggagaataattttgtttcac--attacttgtcactcaagtttcaatacaacattaattattggtttg 27143111  T
Q  298 tcaataatacacttac 313  Q
    |||||||||| |||||    
T  27143112 tcaataatacccttac 27143127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 40052520 - 40052572
Alignment:
Q  254 acttatcactttcaagtttcaatgcaacgttaattattggtttatcaataata 306  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  40052520 acttgtcactttcaagtttcaatgcaacattaattattggtttgtcaataata 40052572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 12744647 - 12744576
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctac 89  Q
    ||||||||||| |||||||| ||||||||||| |||||  |||||||| ||||| ||||||||||| |||||    
T  12744647 aaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgcatgtctctac 12744576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 12755637 - 12755566
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctac 89  Q
    ||||||||||| |||||||| ||||||||||| |||||  |||||||| ||||| ||||||||||| |||||    
T  12755637 aaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgcatgtctctac 12755566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 14925734 - 14925626
Alignment:
Q  208 cctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggtttatcaat 302  Q
    ||||||||||| ||||||||||  |||||||| |||||||||||||     |||| ||  ||||||||||||||||||| |||  ||||||||| |||||    
T  14925734 cctccgtttcacaatacttgtcgtttttagagcataattttgtttcactttacttgtcgttttcaagtttcaatgcaacctta--tattggtttgtcaat 14925637  T
Q  303 aatacacttac 313  Q
    ||||| |||||    
T  14925636 aatactcttac 14925626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 305
Target Start/End: Complemental strand, 18396971 - 18396864
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||| ||||| |||||||||   |||| |||||||||||||||| || ||     ||||||||||||||||||||||| ||||||||||  ||     
T  18396971 tactccctccatttcacaatacttgttgcttttggagaataattttgttttacataatttgtcactttcaagtttcaatgcaacattaattattgacttt 18396872  T
Q  298 tcaataat 305  Q
    ||||||||    
T  18396871 tcaataat 18396864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 312
Target Start/End: Complemental strand, 25929368 - 25929261
Alignment:
Q  210 tccgtttcataatacttgtccattttagagaataattttgtttca-----cttatcactttcaagtttcaatgcaacgttaattattggtttatcaataa 304  Q
    ||||||||| ||||||||||  ||||| |||||||||||||||||     |||  | |||||||||||||| ||||| |||| ||||| |||||||||||    
T  25929368 tccgtttcacaatacttgtcgcttttaaagaataattttgtttcatttcacttgcccctttcaagtttcaacgcaacattaaatattgatttatcaataa 25929269  T
Q  305 tacactta 312  Q
    ||| ||||    
T  25929268 taccctta 25929261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 292
Target Start/End: Original strand, 40562293 - 40562380
Alignment:
Q  210 tccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattg 292  Q
    ||||||| ||||||||||||||||||  ||||| ||||||||| ||     || ||||||||||||||||||||||| ||||||||||    
T  40562293 tccgttttataatacttgtccattttgaagaatgattttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattg 40562380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 1837884 - 1837937
Alignment:
Q  254 acttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatac 307  Q
    |||| ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  1837884 acttgtcacttttaagtttcaatgcaacattaattattgatttatcaataatac 1837937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 9659307 - 9659179
Alignment:
Q  13 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 112  Q
    ||||||||||||||  || |||||||| | |||||||| ||||  |||||||||||||| ||||||||||  | |||  | |||||  ||||| ||||||    
T  9659307 attctaaggacgtactcggggaataccgggttcgattcccaggg-gaacaacgtttgactagtgcgcatgcctttacgcatgagccggattagtcgtcca 9659209  T
Q  113 ccgttggttggttggaaa-cggtgcgaaag 141  Q
    || ||||| ||||||||| |||||||||||    
T  9659208 cctttggtgggttggaaaccggtgcgaaag 9659179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 386
Target Start/End: Original strand, 27143123 - 27143171
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatg 386  Q
    |||||||||||| ||||||| || |||||||||||||||||||||||||    
T  27143123 cttacctatttactgtagagagagaaataatagaatgaaataataaatg 27143171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 23526405 - 23526337
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    ||||| ||||||||||||||  | ||| ||||||||||||||||||||||   ||||||||||||||||||    
T  23526405 cttacatatttattgtagagatagaaaaaatagaatgaaataataaatgg--ttaagggtattatagaaaa 23526337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 45726557 - 45726486
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctac 89  Q
    ||||||||| |||||||||||| | |||||||||||||| ||| ||| |||| |||||||| |||| |||||    
T  45726557 aaggacgtacccgaggaatacctggttcgattctcaggaggaataacatttggccagtgcgtatgtctctac 45726486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 384
Target Start/End: Original strand, 51064865 - 51064911
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaa 384  Q
    |||||||||||||||||||| || |||||||| ||||||||||||||    
T  51064865 cttacctatttattgtagagagagaaataatataatgaaataataaa 51064911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 51065037 - 51064995
Alignment:
Q  199 atattactccctccgtttcataatacttgtccattttagagaa 241  Q
    |||||||||||||||||||| ||||||||||||||||| ||||    
T  51065037 atattactccctccgtttcacaatacttgtccattttaaagaa 51064995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 387
Target Start/End: Complemental strand, 18396860 - 18396811
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgg 387  Q
    ||||| |||||||||||||| || |||||||||||||||||||| |||||    
T  18396860 cttacttatttattgtagagagagaaataatagaatgaaataatgaatgg 18396811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 31061515 - 31061568
Alignment:
Q  254 acttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatac 307  Q
    |||| ||||| ||||||||||||||||| ||||||||||||||  |||||||||    
T  31061515 acttgtcactctcaagtttcaatgcaacattaattattggtttgacaataatac 31061568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 3657282 - 3657242
Alignment:
Q  267 aagtttcaatgcaacgttaattattggtttatcaataatac 307  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  3657282 aagtttcaatgcaacattaattattggtttgtcaataatac 3657242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 5855506 - 5855570
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||||||| || |||||||| | |||||||| ||||| |||||||| ||| ||||||||||||    
T  5855506 aaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatg 5855570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 8763975 - 8764099
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||| ||| |||||| | | |||| ||| ||||  |||||||  ||| ||||||||||||  |||||  |||||||  ||||| |||||||||||    
T  8763975 aaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccaccgtt 8764074  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||| ||||| |||||||||||    
T  8764075 ggtgggtcggaaaccggtgcgaaag 8764099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 16263529 - 16263593
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||| | |||||||||| |||||||  ||||| |||||||| ||| ||||||||||||    
T  16263529 aaggacgtatctggggaataccaggttcgatttccaggaggaacaacgcttggccagtgcgcatg 16263593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 18649476 - 18649352
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||| |  ||||| | | ||||||| |||||  |||||||| ||||||||||||||||  ||||| ||||||||| ||||  || ||||| ||    
T  18649476 aaggacgtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgtacgagccagattaatcgcccaccttt 18649377  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
     || | ||||||| |||||||||||    
T  18649376 agtggattggaaaccggtgcgaaag 18649352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 31734273 - 31734368
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccacc 114  Q
    ||||| ||| |||||||||||  ||||||||||| |||   ||||||| ||| ||||||||||||  ||||| ||||||||||||||  ||||||||    
T  31734273 aaggatgtacccgaggaatactggattcgattct-aggggaaacaacgattggccagtgcgcatgcctctacgtacgagccaaattaatcgtccacc 31734368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 41663984 - 41663856
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 113  Q
    ||||||||||||||||| |||||||| | |||||||| ||||  |||||||  |||  |||||||||||  |||||  | ||||   ||||| |||||||    
T  41663984 ttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagtcgtccac 41663885  T
Q  114 cgttggttggttggaaa-cggtgcgaaag 141  Q
    | ||||| ||| ||||| |||||||||||    
T  41663884 cattggtgggtcggaaaccggtgcgaaag 41663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 45362006 - 45361942
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||| ||  |||||||| | |||||||||||||| |||||||| ||| ||||||||||||    
T  45362006 aaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatg 45361942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 49078094 - 49078222
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 113  Q
    ||||||||||||||||| |||||||| | |||||||| ||||   ||||||  ||| ||||||||||||  |||||  | |||||  ||||| ||| |||    
T  49078094 ttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcac 49078193  T
Q  114 cgttggttggttggaaa-cggtgcgaaag 141  Q
    | ||||| ||| ||||| |||||||||||    
T  49078194 cattggtaggtcggaaaccggtgcgaaag 49078222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 51437453 - 51437517
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||||||||||||||||| | | |||||||| || |  |||||||| ||||||||||||||||    
T  51437453 aaggacgtatccgaggaatatcgggttcgattcccatggggaacaacgcttgaccagtgcgcatg 51437517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 3943804 - 3943753
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttca 254  Q
    |||||||||||||||| ||||| ||||||||||||||||   ||||||||||    
T  3943804 tactccctccgtttcaaaatacatgtccattttagagaaattttttgtttca 3943753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 41959850 - 41959799
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttca 254  Q
    |||||||||||||||| ||||| ||||||||||||||||   ||||||||||    
T  41959850 tactccctccgtttcaaaatacatgtccattttagagaaattttttgtttca 41959799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 284330 - 284371
Alignment:
Q  200 tattactccctccgtttcataatacttgtccattttagagaa 241  Q
    ||||||||||||||||||| ||||| |||||||||| |||||    
T  284330 tattactccctccgtttcaaaatacatgtccattttggagaa 284371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 2567260 - 2567373
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    |||||||||| ||  ||||||| | ||||||| || ||   ||||||| ||| ||||||||||||  |||||| ||||| || |||||||||||| | ||    
T  2567260 aaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgcatgcctctactcacgagtcagattagccgtccatcttt 2567359  T
Q  118 ggttggttggaaac 131  Q
    ||| ||| ||||||    
T  2567360 ggtgggtcggaaac 2567373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 13265917 - 13265954
Alignment:
Q  13 attctaaggacgtatccgaggaataccagattcgattc 50  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  13265917 attctaaggacgtatccgaggaatacctggttcgattc 13265954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 387
Target Start/End: Original strand, 14351872 - 14351921
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgg 387  Q
    ||||| |||||||||||||| || ||||||||||| |||||| |||||||    
T  14351872 cttacttatttattgtagagagaaaaataatagaacgaaatattaaatgg 14351921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 23045559 - 23045518
Alignment:
Q  200 tattactccctccgtttcataatacttgtccattttagagaa 241  Q
    ||||||||||||||||||| ||||| |||||||||| |||||    
T  23045559 tattactccctccgtttcaaaatacatgtccattttggagaa 23045518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 24772023 - 24772085
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    |||||||||||||  || ||| |||||||| |||||||||||||   ||||||||||||||||||    
T  24772023 tatttattgtagaaagagaaaaaatagaataaaataataaatgg--ttaagggtattatagaaaa 24772085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 33082904 - 33082842
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    |||||||||||||  || ||| |||||||| |||||||||||||   ||||||||||||||||||    
T  33082904 tatttattgtagaaagagaaaaaatagaataaaataataaatgg--ttaagggtattatagaaaa 33082842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 34334424 - 34334355
Alignment:
Q  13 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||| ||||||||||||| |||||||| | |||||||| ||||  |||||||  ||| ||||||||||||    
T  34334424 attccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatg 34334355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 422
Target Start/End: Original strand, 34458835 - 34458916
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaatacaaagaatttc 422  Q
    ||||| |||| ||| ||||| || ||||||||||||||||||||||||  |  ||||| ||||||||||||| ||| ||||||||    
T  34458835 cttacatattcattatagagagagaaataatagaatgaaataataaattag--taaggttattatagaaaaa-acacagaatttc 34458916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 409
Target Start/End: Complemental strand, 3657239 - 3657173
Alignment:
Q  339 ttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    ||||||||||||||||||| ||  ||||||||||||||||  |||||||   ||||| |||||||||||||    
T  3657239 ttacctatttattgtagagagaggaataatagaatgaaat--taaatgg--ttaaggttattatagaaaaa 3657173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 16956450 - 16956514
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||| ||| ||||||||   |||| ||||||||   ||||||||||||||||||||||||    
T  16956450 aaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatg 16956514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 17358595 - 17358531
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||  | |||||||| | |||||||||||||  |||||||| ||||||| ||||||||    
T  17358595 aaggacgtatttggggaataccgggttcgattctcagggagaacaacgcttgaccaatgcgcatg 17358531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 18808249 - 18808313
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||||||||  ||||||| ||| ||| ||||||||   |||||||| ||||||||||||||||    
T  18808249 aaggacgtatctaaggaataacaggttcaattctcagagggaacaacgcttgaccagtgcgcatg 18808313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 26325796 - 26325920
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    |||||||||||||||||||| | | |||||||| |||   |||||||  |||  |||||||||||  |||||  | |||||  ||||| |||||||| ||    
T  26325796 aaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccatt 26325895  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||| ||||| |||||||||||    
T  26325896 ggtgggtcggaaaccggtgcgaaag 26325920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 41959076 - 41959116
Alignment:
Q  201 attactccctccgtttcataatacttgtccattttagagaa 241  Q
    |||||||||||||||||| ||||| |||||||||| |||||    
T  41959076 attactccctccgtttcaaaatacatgtccattttggagaa 41959116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 44969653 - 44969712
Alignment:
Q  22 acgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||| ||||| |||||||| |||||||||||||| |||||||| ||| |||||| |||||    
T  44969653 acgtacccgagaaataccaggttcgattctcagga-gaacaacgcttggccagtgtgcatg 44969712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 50503485 - 50503421
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||||| |||||| | | |||||||| ||||  |||||||  ||||||||||||||||    
T  50503485 aaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatg 50503421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 27814088 - 27813979
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  27814088 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtgttg 27813989  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  27813988 tcaataatac 27813979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 36453124 - 36453233
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  36453124 tactctctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 36453223  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  36453224 tcaataatac 36453233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 10981785 - 10981676
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  10981785 tactccctccatttcataatatttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 10981686  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  10981685 tcaataatac 10981676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 25614353 - 25614462
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||     || ||||||| ||||||||||||||| ||||||||||  ||     
T  25614353 tactccctccgtttcataataattgtccattttagagaataattttgtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtcttg 25614452  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  25614453 tcaataatac 25614462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 47110727 - 47110618
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  47110727 tactccctccgtttcataatacttattcattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 47110628  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  47110627 tcaataatac 47110618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 40349238 - 40349130
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||     || ||||||| ||||||||||||||| |||||||||| ||      
T  40349238 tactccctccgtttcataatacttgtccattttagagaataattt-gtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtttgg 40349140  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  40349139 tcaataatac 40349130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 313
Target Start/End: Complemental strand, 16662372 - 16662255
Alignment:
Q  201 attactccctccgtttcataatacttgtccattttagagaataattttgtttca-----cttatcactttcaagtttcaatgcaacgttaattattggtt 295  Q
    |||||||||||| ||||| ||||||||||  ||||  ||||||||||||||| |     ||| ||||||||||||||||||||||| |||||||||| ||    
T  16662372 attactccctccatttcacaatacttgtcacttttgaagaataattttgttttaaattacttgtcactttcaagtttcaatgcaacattaattattgatt 16662273  T
Q  296 tatcaataatacacttac 313  Q
    | ||| |||||| |||||    
T  16662272 tgtcattaatacccttac 16662255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 313
Target Start/End: Complemental strand, 17636732 - 17636615
Alignment:
Q  201 attactccctccgtttcataatacttgtccattttagagaataattttgtttca-----cttatcactttcaagtttcaatgcaacgttaattattggtt 295  Q
    |||||||||||| ||||| ||||||||||  ||||  ||||||||||||||| |     ||| ||||||||||||||||||||||| |||||||||| ||    
T  17636732 attactccctccatttcacaatacttgtcacttttgaagaataattttgttttaaattacttgtcactttcaagtttcaatgcaacattaattattgatt 17636633  T
Q  296 tatcaataatacacttac 313  Q
    | ||| |||||| |||||    
T  17636632 tgtcattaatacccttac 17636615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 23823931 - 23823999
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||||||||||||||||||||| |||||| |||||||| |   ||||||||||| ||||||||||||    
T  23823931 ttctaaggacgtatccgaggaatatcagatttgattctcaagggaaacaacgtttggccagtgcgcatg 23823999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 29151928 - 29151990
Alignment:
Q  20 ggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||| | |||||||||| | |||||||| ||||| |||||||||||||||||||||||||    
T  29151928 ggacgtacctgaggaataccgggttcgattcccaggaagaacaacgtttgaccagtgcgcatg 29151990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 4195325 - 4195212
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| ||||||||   |||||||  ||||| ||||||| |||| | ||||||||||  |||||  | |||||  |||||||||||||| ||    
T  4195325 aaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtgcgcatgcctctacgcatgagccggattagccgtccaccatt 4195226  T
Q  118 ggttggttggaaac 131  Q
    ||| ||||||||||    
T  4195225 ggtgggttggaaac 4195212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 17748505 - 17748392
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    |||||||||| || |||||||| | |||||||| ||||  |||||||| ||| ||||||||||||  ||||| ||||||||  ||||| |||||||| ||    
T  17748505 aaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccaccttt 17748406  T
Q  118 ggttggttggaaac 131  Q
    | | ||| ||||||    
T  17748405 gttgggtcggaaac 17748392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 1797446 - 1797526
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagcc 98  Q
    |||||||||||||||||||||| | |||||||| ||||   ||||||| ||| ||||||||||||| |||||  |||||||    
T  1797446 aaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctctacgcacgagcc 1797526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 27941040 - 27941099
Alignment:
Q  254 acttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatacacttac 313  Q
    |||| |||||||||||||||| |||||| ||||||||||| || |||||||||| |||||    
T  27941040 acttgtcactttcaagtttcattgcaacattaattattggcttgtcaataatacccttac 27941099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 385
Target Start/End: Original strand, 7743515 - 7743556
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaat 385  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  7743515 tatttattgtagagagataaataattgaatgaaataataaat 7743556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 42210385 - 42210272
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    |||||||||||||||||||||| | |||||||| |||    ||||||||||| ||||||||||||  |||||  |||||||  ||||  |  ||||||||    
T  42210385 aaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcacgagccggattaatcacccaccgtt 42210286  T
Q  118 ggttggttggaaac 131  Q
    ||| ||| ||||||    
T  42210285 ggtgggtcggaaac 42210272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 365130 - 365190
Alignment:
Q  22 acgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||||||||||||||| | |||||||| ||||| |||||||| || | |||||||||||    
T  365130 acgtatccgaggaataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcatg 365190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 3091755 - 3091675
Alignment:
Q  238 agaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggtttatcaataatacacttac 313  Q
    ||||||||||||||||||||      ||| ||| ||||||||||||||| |||| ||||||||| |||||||||| |||||    
T  3091755 agaataattttgtttcactttacttgtcatttttaagtttcaatgcaacattaaatattggtttgtcaataatacccttac 3091675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 10047999 - 10047875
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||||| | |||||||| ||||  |||||||  ||| |||||||||| |  |||||  | ||||  |||||| |||||||| ||    
T  10047999 aaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcatgagcagaattagtcgtccaccatt 10047900  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||| ||||| |||||||||||    
T  10047899 ggtgggtcggaaaccggtgcgaaag 10047875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 16802109 - 16802169
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcg 78  Q
    ||||||||| ||| |||||||| ||||||||||| |||| |||||||| ||| ||||||||    
T  16802109 aaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgcg 16802169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 48804669 - 48804793
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||||| | |||||||| || |  |||||||  ||| ||||||||||||  |||||  | |||||  ||||| |||||||| ||    
T  48804669 aaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccatt 48804768  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||| ||||| |||||||||||    
T  48804769 ggtgggtcggaaaccggtgcgaaag 48804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 3091679 - 3091599
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatag-aaaaatacaaagaatttc 422  Q
    ||||| |||||||||||||| ||  |||| ||||||||||||||||||||   |||||||||||||| ||||| ||||||||||||    
T  3091679 cttacatatttattgtagagaga--aata-tagaatgaaataataaatgg--ttaagggtattatagaaaaaacacaaagaatttc 3091599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 4228874 - 4228813
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||||||||||||||||||||| |||||||  |||   |||||||||||| ||||||| ||||    
T  4228874 aaggacgtatccgaggaataccaggttcgatttccag---gaacaacgtttggccagtgcacatg 4228813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 22973953 - 22974055
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    |||||||||  || |||||||| | |||||||||||||  |||||||| ||| |||||| |||||  |||||  | |||||| ||||| |||||||| ||    
T  22973953 aaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtcgtccaccttt 22974052  T
Q  118 ggt 120  Q
    |||    
T  22974053 ggt 22974055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 16360598 - 16360549
Alignment:
Q  254 acttatcactttcaagtttcaatgcaacgttaattattggtttatcaata 303  Q
    |||| |||||||||||||||||| |||| |||| ||||||||| ||||||    
T  16360598 acttgtcactttcaagtttcaatacaacattaaatattggtttgtcaata 16360549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 43862092 - 43862031
Alignment:
Q  21 gacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||||| | |||||||| | |||||||| ||||  |||||||||||| ||||||||||||    
T  43862092 gacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatg 43862031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 46414660 - 46414725
Alignment:
Q  17 taaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||||||| ||| |||||||||  |||||||||||||| ||| |||| ||| ||| ||||||||    
T  46414660 taaggacgtacccgtggaataccaagttcgattctcaggatgaataacgcttggccaatgcgcatg 46414725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 16662259 - 16662190
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    |||||||||||||||||||  || ||| |||| ||| |||||||||||||   ||||||||||||| |||||    
T  16662259 cttacctatttattgtagatagagaaagaatataataaaataataaatgg--ttaagggtattataaaaaaa 16662190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 17636619 - 17636550
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    |||||||||||||||||||  || ||| |||| ||| |||||||||||||   ||||||||||||| |||||    
T  17636619 cttacctatttattgtagatagagaaagaatataataaaataataaatgg--ttaagggtattataaaaaaa 17636550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 34659226 - 34659314
Alignment:
Q  32 ggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggt 120  Q
    |||||||| | ||||||||||| |  |||||||| ||||||||||||||||  |||||  |||||||  ||||| || ||||| |||||    
T  34659226 ggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccaccattggt 34659314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 38578990 - 38578866
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||| ||| |||||| | | |||||||| ||||  |||||||| ||| ||||||||||||  |||||  | |||||  ||||| || ||||| ||    
T  38578990 aaggacgtacccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccaccttt 38578891  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||| ||||| |||||||||||    
T  38578890 ggtgggtcggaaaccggtgcgaaag 38578866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 21310698 - 21310589
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  21310698 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 21310599  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  21310598 tcaataatac 21310589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 12071839 - 12071728
Alignment:
Q  201 attactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtt 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| |||||| |||  |    
T  12071839 attactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattcttgtct 12071740  T
Q  296 tatcaataatac 307  Q
    | ||||||||||    
T  12071739 tgtcaataatac 12071728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 307
Target Start/End: Original strand, 21661537 - 21661644
Alignment:
Q  205 ctccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtttatc 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||| |||| |||||  || ||    
T  21661537 ctccctccgtttcataatacttgtccattttagagaataattttgtttcacaatatttatcactttcaagtttcaatgcaacattaagtattgtcttgtc 21661636  T
Q  300 aataatac 307  Q
    ||||||||    
T  21661637 aataatac 21661644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 307
Target Start/End: Original strand, 21670301 - 21670408
Alignment:
Q  205 ctccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtttatc 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||| |||| |||||  || ||    
T  21670301 ctccctccgtttcataatacttgtccattttagagaataattttgtttcacaatatttatcactttcaagtttcaatgcaacattaagtattgtcttgtc 21670400  T
Q  300 aataatac 307  Q
    ||||||||    
T  21670401 aataatac 21670408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 14261321 - 14261212
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || || |||||||||||||||||||| ||||||||||  ||     
T  14261321 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttg 14261222  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  14261221 tcaataatac 14261212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 22321268 - 22321377
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  22321268 tactccctccgtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 22321367  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  22321368 tcaataatac 22321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 24706247 - 24706356
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || || |||||||||||||||||||| ||||||||||  ||     
T  24706247 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttg 24706346  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  24706347 tcaataatac 24706356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 25704928 - 25704819
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || |||||||||||||||| |||||| ||||||||||  ||     
T  25704928 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcagtgcaacattaattattgtcttg 25704829  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  25704828 tcaataatac 25704819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 40122487 - 40122596
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  40122487 tactctctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 40122586  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  40122587 tcaataatac 40122596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 19692999 - 19692884
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| ||||| ||| |||||||||| |||||||||||||||||||||||||||      ||||||||||||||||||||||| |||||||||||||||    
T  19692999 tactccatccgtatcacaatacttgtctattttagagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattggttta 19692900  T
Q  298 tcaataatacacttac 313  Q
    ||||||| || |||||    
T  19692899 tcaataacacccttac 19692884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 19703584 - 19703469
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| ||||| ||| |||||||||| |||||||||||||||||||||||||||      ||||||||||||||||||||||| |||||||||||||||    
T  19703584 tactccatccgtatcacaatacttgtctattttagagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattggttta 19703485  T
Q  298 tcaataatacacttac 313  Q
    ||||||| || |||||    
T  19703484 tcaataacacccttac 19703469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 44569114 - 44569005
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || || |||||| ||||||||||||| ||||||||||  ||     
T  44569114 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcatgtttcaatgcaacattaattattgtcttg 44569015  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  44569014 tcaataatac 44569005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 313
Target Start/End: Complemental strand, 50768129 - 50768024
Alignment:
Q  213 gtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatac 307  Q
    |||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  || ||||||||||    
T  50768129 gtttcataatacttgtccattttagagaataattttgtttcacaatatttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 50768030  T
Q  308 acttac 313  Q
     |||||    
T  50768029 ccttac 50768024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 295659 - 295534
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 113  Q
    ||||||||||||||||| ||||||||||||||||||| ||| | |||||||||||| ||||||||||||  |||||  |||| ||| ||||| |||||||    
T  295659 ttctaaggacgtatccggggaataccagattcgattcccag-aggaacaacgtttggccagtgcgcatgcctctacgcacgaaccagattagtcgtccac 295561  T
Q  114 cgttggttggttggaaa-cggtgcgaa 139  Q
    ||||||| |||| |||| |||||||||    
T  295560 cgttggtgggtttgaaaccggtgcgaa 295534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 204 - 313
Target Start/End: Complemental strand, 21065037 - 21064923
Alignment:
Q  204 actccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggtttat 298  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||     ||||||| ||||||| |||||||||||| ||||||||||  ||      
T  21065037 actccctccgtttcataatacttgttcattttagagaataattttgtttcacaatacttatcgctttcaaatttcaatgcaacattaattattgtcttga 21064938  T
Q  299 caataatacacttac 313  Q
    ||||||||| |||||    
T  21064937 caataatactcttac 21064923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 312
Target Start/End: Original strand, 6128956 - 6129063
Alignment:
Q  210 tccgtttcataatacttgtccattttagagaataattttgtttca-----cttatcactttcaagtttcaatgcaacgttaattattggtttatcaataa 304  Q
    ||||||||| ||||| ||||  ||||  |||||||||||||||||     ||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  6128956 tccgtttcacaatacatgtcgcttttgaagaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataa 6129055  T
Q  305 tacactta 312  Q
    ||| ||||    
T  6129056 taccctta 6129063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 20249014 - 20249129
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||     || | || |||||||||||||||||||  ||||||||||  ||     
T  20249014 tactcactccgtttcataatacttgtccattttggagaataattttgtttcacaatacctgtctctttcaagtttcaatgcaatattaattattgtcttg 20249113  T
Q  298 tcaataatacacttac 313  Q
    |||||||||| |||||    
T  20249114 tcaataatacccttac 20249129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 50839030 - 50839126
Alignment:
Q  202 ttactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattgg 293  Q
    ||||||||||| ||||| ||||||||||  |||| |||||||||||||||||||     || ||| ||||||||||||||||||| |||||||||||    
T  50839030 ttactccctccatttcacaatacttgtcgcttttggagaataattttgtttcacattacttgtcattttcaagtttcaatgcaacattaattattgg 50839126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 18507276 - 18507374
Alignment:
Q  213 gtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtttatcaataata 306  Q
    |||||| ||||||||||  |||||||| |||||||||||||||     || ||||||||||||||||||||||| ||||||||||  || |||||||||    
T  18507276 gtttcacaatacttgtcgcttttagagcataattttgtttcacatttcttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataata 18507374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 19692888 - 19692805
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatag-aaaaatacaaagaatttc 422  Q
    ||||| |||||||||||||| || ||||||||||||||||||||||||| |  ||||| |||||||| ||||| ||||||||||||    
T  19692888 cttacttatttattgtagagagagaaataatagaatgaaataataaatgag--taaggatattatagaaaaaacacaaagaatttc 19692805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 19703473 - 19703390
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatag-aaaaatacaaagaatttc 422  Q
    ||||| |||||||||||||| || ||||||||||||||||||||||||| |  ||||| |||||||| ||||| ||||||||||||    
T  19703473 cttacttatttattgtagagagagaaataatagaatgaaataataaatgag--taaggatattatagaaaaaacacaaagaatttc 19703390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 32543756 - 32543642
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| || |||||| ||||||||||  ||||||||||||||||||||||     |||| | |||||||||||| ||||| || ||||||||||||||     
T  32543756 tactccttctgtttcacaatacttgtcgcttttagagaataattttgtttcattttacttgttactttcaagttttaatgcgacattaattattggtttg 32543657  T
Q  298 tcaataatacactta 312  Q
    ||| |||||| ||||    
T  32543656 tcattaataccctta 32543642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 4736585 - 4736708
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||| ||| |||||||||||| | ||| ||||||||    ||||||||||| ||| || |||||  ||||| ||| |||| |||||| || ||||||||    
T  4736585 aaggatgtacccgaggaataccgggttcaattctcagtggaaacaacgtttggccaatgtgcatgcctctacgtacaagccgaattagtcgcccaccgtt 4736684  T
Q  118 ggttggttggaaacggtgcgaaag 141  Q
    ||| ||| ||||||||||||||||    
T  4736685 ggtgggtcggaaacggtgcgaaag 4736708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 421
Target Start/End: Original strand, 6129060 - 6129142
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatag-aaaaatacaaagaattt 421  Q
    |||| ||||||||||||||| || ||||||| ||||||||||||||||  |  |||||||||| ||| |||||||||||||||||    
T  6129060 cttatctatttattgtagagagagaaataatggaatgaaataataaat--gattaagggtattgtagaaaaaatacaaagaattt 6129142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 14859302 - 14859375
Alignment:
Q  41 gattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccacc 114  Q
    ||||||||| |||||| |||||| ||||||||||||||||||| |||||  |||||||| ||||| | ||||||    
T  14859302 gattcgattttcaggaggaacaatgtttgaccagtgcgcatgtctctacgcacgagccagattagtcatccacc 14859375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 5472971 - 5472847
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||||||| || ||||||||||   ||||||| ||| ||||||||||||  |||||  |||||||  ||||| || ||||| ||    
T  5472971 aaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttt 5472872  T
Q  118 ggttggttggaaac-ggtgcgaaag 141  Q
    ||| ||| | |||| ||||||||||    
T  5472871 ggtgggtcgaaaactggtgcgaaag 5472847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 14124016 - 14124128
Alignment:
Q  30 gaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggttggttggaa 129  Q
    |||||||||||| |||||||| ||||  ||||||| |||| ||||||||||||  |||||  |||||||  ||||| ||  |||| ||||| ||||||||    
T  14124016 gaggaataccaggttcgattcccagggggaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgggttggaa 14124115  T
Q  130 a-cggtgcgaaag 141  Q
    | |||||||||||    
T  14124116 accggtgcgaaag 14124128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 53599048 - 53599112
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||| ||| |||||||| | |||||||| ||||| |||||||||||| ||||||||||||    
T  53599048 aaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatg 53599112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 20249125 - 20249192
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaa 407  Q
    ||||| |||||||||||||| || ||| |||||||| |||||||||||||   |||||||||||||||||    
T  20249125 cttacatatttattgtagagagagaaaaaatagaataaaataataaatgg--ttaagggtattatagaaa 20249192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 29895775 - 29895900
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||||| | |||||||| ||||  |||||||  ||| ||||||||||||  |||||  | |||||  ||||| |||||||| ||    
T  29895775 aaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccatt 29895874  T
Q  118 ggttggttggaaa-cggtgcgaaagg 142  Q
    ||| | | ||||| ||||||||||||    
T  29895875 ggtggttcggaaaccggtgcgaaagg 29895900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 32543645 - 32543563
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaatacaaagaatttc 422  Q
    |||| ||||||||||||||   | |||||||| |||||||||||||||  |  ||||||||||||| ||||| ||||||||||||    
T  32543645 cttatctatttattgtagaaaaagaaataataaaatgaaataataaat--gattaagggtattataaaaaaacacaaagaatttc 32543563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 20128297 - 20128421
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||||  | |||||||||||||  |||||| | ||| ||||||||||||  | |||  |||||| | ||||| |||||||| ||    
T  20128297 aaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcacgagctagattagtcgtccaccatt 20128396  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| |||  |||| |||||||||||    
T  20128397 ggtgggtcagaaaccggtgcgaaag 20128421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 38166015 - 38166139
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||||  | || ||||| ||||  |||||||| ||| ||||||||||||  |||||  |||||||  ||||| || ||||| ||    
T  38166015 aaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgcatggctctacgcacgagccggattagtcgcccaccttt 38166114  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||| ||||| |||||||||||    
T  38166115 ggtgggtcggaaaccggtgcgaaag 38166139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 14567943 - 14568006
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgc 77  Q
    ||||||||||||||  | |||||||||| |||||||||||||  ||| |||| |||||||||||    
T  14567943 ttctaaggacgtatttggggaataccaggttcgattctcagggagaataacgcttgaccagtgc 14568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 21429292 - 21429411
Alignment:
Q  21 gacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggt 120  Q
    ||||||||||||||||| | | ||||||| | |||  |||||||||||  ||||||||||||  |||||  ||||| || | ||| |||||||| |||||    
T  21429292 gacgtatccgaggaatatcgggttcgatttttagggggaacaacgtttagccagtgcgcatgcctctacgcacgagtcagactagtcgtccacctttggt 21429391  T
Q  121 tggttggaaa-cggtgcgaa 139  Q
     ||| ||||| |||||||||    
T  21429392 gggtcggaaaccggtgcgaa 21429411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 35359749 - 35359788
Alignment:
Q  43 ttcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  35359749 ttcgattctcagggggaacaacgtttgaccagtgcgcatg 35359788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 238
Target Start/End: Complemental strand, 39295453 - 39295418
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttaga 238  Q
    |||||| |||||||||||||||||||||||||||||    
T  39295453 tactccttccgtttcataatacttgtccattttaga 39295418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 8889006 - 8889123
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 113  Q
    ||||||||||||||||| |||||||| | ||||||||  |||  |||||||  |||  |||||||||||  |||||  | |||||  ||||| |||||||    
T  8889006 ttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggattagtcgtccac 8889105  T
Q  114 cgttggttggttggaaac 131  Q
    | ||||| ||| ||||||    
T  8889106 ctttggtgggtcggaaac 8889123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 12071720 - 12071658
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    |||||||||||||| || ||| |||| |||||||||||||||  |  ||||||||||||||||||    
T  12071720 tatttattgtagagagagaaaaaataaaatgaaataataaat--gattaagggtattatagaaaa 12071658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 22321385 - 22321447
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    |||||||||||||| || ||| |||| |||||||||||||||  |  ||||||||||||||||||    
T  22321385 tatttattgtagagagagaaaaaataaaatgaaataataaat--gattaagggtattatagaaaa 22321447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 24850754 - 24850686
Alignment:
Q  13 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||| ||||||||||||| | |||||||||||| ||| |||||  |||||||  ||||||||||||||||    
T  24850754 attccaaggacgtatccgggaaataccagattcaattatcagg-ggaacaacacttgaccagtgcgcatg 24850686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 26676645 - 26676694
Alignment:
Q  263 tttcaagtttcaatgcaacgttaattattggtttatcaataatacactta 312  Q
    |||||||||| ||||||||  ||||||||| |||||||||||||| ||||    
T  26676645 tttcaagttttaatgcaacaataattattgatttatcaataatactctta 26676694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 34324700 - 34324762
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    |||||||||||||| || ||| |||| |||||||||||||||  |  ||||||||||||||||||    
T  34324700 tatttattgtagagagagaaaaaataaaatgaaataataaat--gattaagggtattatagaaaa 34324762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 40122604 - 40122665
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    |||||||||||||| || ||| |||| |||||||||||||||||   ||||||||||||||||||    
T  40122604 tatttattgtagagagaaaaa-aataaaatgaaataataaatgg--ttaagggtattatagaaaa 40122665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 43458596 - 43458697
Alignment:
Q  13 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 112  Q
    |||| ||||||||||  | |||||||  |||||||||| ||||| ||| |||| ||| ||||||||||||  |||||  |||||||  ||||| ||||||    
T  43458596 attccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgcgcatgcctctacggacgagccggattagtcgtcca 43458695  T
Q  113 cc 114  Q
    ||    
T  43458696 cc 43458697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 1446814 - 1446878
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||||| |||||||| | |||||||| ||||  |||||||  ||| ||||||||||||    
T  1446814 aaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatg 1446878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 2559295 - 2559419
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||| | | |||||||| |||||||||   |||| |||||||| ||| ||||||||||||  |||||  || ||||  ||||  |||||||| ||    
T  2559295 aaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgcatgcctctacgcacaagccggattactcgtccaccttt 2559394  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||| ||||| |||||||||||    
T  2559395 ggtgggtcggaaaccggtgcgaaag 2559419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 34324618 - 34324654
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagag 239  Q
    |||||| || |||||||||||||||||||||||||||    
T  34324618 tactccatctgtttcataatacttgtccattttagag 34324654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 13365120 - 13365011
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||     |||| ||||||||||||||||||||||| ||||||||||  ||     
T  13365120 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 13365021  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  13365020 tcaataatac 13365011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 46694110 - 46694219
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  46694110 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 46694209  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  46694210 tcaataatac 46694219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 18355868 - 18355983
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||      ||||||||||||||||||||||| |||||||||| ||||    
T  18355868 tactccctccgtttcacaatacttgtccattttgaagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattgattta 18355967  T
Q  298 tcaataatacacttac 313  Q
    |||||||||| |||||    
T  18355968 tcaataatacccttac 18355983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 203 - 305
Target Start/End: Complemental strand, 29375409 - 29375302
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  29375409 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 29375310  T
Q  298 tcaataat 305  Q
    ||||||||    
T  29375309 tcaataat 29375302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 19241668 - 19241777
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||     |||| ||||||| ||||||||||||||| ||||||||||  ||     
T  19241668 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcacttttaagtttcaatgcaacattaattattgacttg 19241767  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  19241768 tcaataatac 19241777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 36881557 - 36881448
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || || |||||||||||||||||||| ||||||||||  ||     
T  36881557 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttg 36881458  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  36881457 tcaataatac 36881448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 203 - 308
Target Start/End: Complemental strand, 48820617 - 48820507
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||| ||||||||||||||||||||||||||||| | ||||||||||||||||     || ||||||||||||||||||||||| |||||||||| |||     
T  48820617 tacttcctccgtttcataatacttgtccattttaaaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgttttg 48820518  T
Q  298 tcaataataca 308  Q
    |||||||||||    
T  48820517 tcaataataca 48820507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 200 - 307
Target Start/End: Complemental strand, 3383356 - 3383244
Alignment:
Q  200 tattactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggt 294  Q
    ||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||      
T  3383356 tattactcctttcgttttataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtc 3383257  T
Q  295 ttatcaataatac 307  Q
    || ||||||||||    
T  3383256 ttgtcaataatac 3383244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 32834988 - 32835103
Alignment:
Q  202 ttactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttt 296  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||     |||| ||| ||||||||||||||||||| |||| ||||| |||    
T  32834988 ttactccctccgtttcataatacttgtccattgtagagaataatttcgtttcatagtacttgtcattttcaagtttcaatgcaacattaagtattgtttt 32835087  T
Q  297 atcaataatacactta 312  Q
     |||||||||| ||||    
T  32835088 gtcaataataccctta 32835103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 199132 - 199023
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||||||||     || ||| ||||||||||||||||||| |||||||||| |||     
T  199132 tactccctccatttcataatagttgtccattttagaaaataattttgtttcacaatatttgtcattttcaagtttcaatgcaacattaattattgttttg 199033  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  199032 tcaataatac 199023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 23087931 - 23088040
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||| |||||||||||||||||||||| |||||| ||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  23087931 tacttcctccgtttcataatacttgtcgattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 23088030  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  23088031 tcaataatac 23088040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 214 - 313
Target Start/End: Complemental strand, 54086818 - 54086714
Alignment:
Q  214 tttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggtttatcaataataca 308  Q
    ||||| |||||||||||||||| ||||||| |||||||||| ||      |||||||||||||||||| |||| |||||||||| ||||||||||||||     
T  54086818 tttcacaatacttgtccattttggagaatacttttgtttcattttatttgtcactttcaagtttcaatacaacattaattattgatttatcaataatacc 54086719  T
Q  309 cttac 313  Q
    |||||    
T  54086718 cttac 54086714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 409
Target Start/End: Complemental strand, 24064388 - 24064320
Alignment:
Q  339 ttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    ||||||||||||||||||| || |||||||||||| ||||||||||||||  |||||||||||||||||||    
T  24064388 ttacctatttattgtagagagagaaataatagaataaaataataaatggg--taagggtattatagaaaaa 24064320  T

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Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 6901831 - 6901730
Alignment:
Q  209 ctccgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggtttatcaata 303  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||      ||||||| ||||||||||||||| ||||| |||| ||||||||||    
T  6901831 ctccgtttcacaata-ttgtccattttggagaataattttgtttcactttacttgtcacttttaagtttcaatgcaacattaatcattgatttatcaata 6901733  T
Q  304 ata 306  Q
    |||    
T  6901732 ata 6901730  T

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Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 13703489 - 13703380
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| |||||||||||||||||||||||| |  ||||||| ||||||| ||     || ||||||||||||||||||||||| ||||||||||  ||     
T  13703489 tactccatccgtttcataatacttgtccattctgaagaataaatttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattgtgttg 13703390  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  13703389 tcaataatac 13703380  T

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Target: chr3; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 3755553 - 3755624
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctac 89  Q
    ||||||||||||| ||||||||   |||||||| ||||| |||||||||||||||||||||||||| |||||    
T  3755553 aaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgcgcatgtctctac 3755624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 214 - 312
Target Start/End: Complemental strand, 48436490 - 48436387
Alignment:
Q  214 tttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtttatcaataataca 308  Q
    ||||| |||| |||||  |||| |||||||||||||||||||     || ||||||||||||||||||||||| ||||||||| | || |||||||||||    
T  48436490 tttcacaatatttgtcacttttggagaataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattagcttgtcaataataca 48436391  T
Q  309 ctta 312  Q
    ||||    
T  48436390 ctta 48436387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 422
Target Start/End: Original strand, 18355979 - 18356062
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatag-aaaaatacaaagaatttc 422  Q
    ||||| |||||||||||||| || ||||||||||||||||| ||||||| |  |||||||||||||| ||||| ||||||||||||    
T  18355979 cttacttatttattgtagagagagaaataatagaatgaaatgataaatgag--taagggtattatagaaaaaacacaaagaatttc 18356062  T

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Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 43750398 - 43750304
Alignment:
Q  218 ataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatac 307  Q
    ||||||||||||||||||  |||||||||| |||||     |||| ||||||||||||||||||||||| ||||||||||  || ||||||||||    
T  43750398 ataatacttgtccattttttagaataatttggtttctcaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 43750304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 24064488 - 24064389
Alignment:
Q  212 cgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaacgttaattattggtttatcaataata 306  Q
    ||||||| ||||| ||||  |||| |||||||||||| ||||||||      |||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  24064488 cgtttcacaatacatgtcgtttttggagaataattttatttcactttacatgtcactttcaagttttaatgtaacattaattattggtttatcaataata 24064389  T

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Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 26783746 - 26783663
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcactta-----tcactttcaagtttcaatgcaac 281  Q
    |||| ||||||||| | |||||||||| |||||| ||||||||||||||||||||      |||||||||||||||||||||||    
T  26783746 tacttcctccgttttacaatacttgtctattttaaagaataattttgtttcactttacttgtcactttcaagtttcaatgcaac 26783663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 409
Target Start/End: Original strand, 52009162 - 52009230
Alignment:
Q  339 ttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| |   |||| ||||||||||||||    
T  52009162 ttacctatttattgtagagagataaataatagaataaaataataaatag--ttaagtgtattatagaaaaa 52009230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 54086718 - 54086636
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatag-aaaaatacaaagaatttc 422  Q
    ||||||||| |||| ||||| || |||||||||||||||||||| |||| |  |||||||||||||| ||||||||||||||||||    
T  54086718 cttacctatgtattatagagagaaaaataatagaatgaaataat-aatgag--taagggtattatagaaaaaatacaaagaatttc 54086636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 29135896 - 29136009
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||||| |||||||||| ||||  |||||||  ||| ||||||||||||  |||||  | |||||  ||||| | |||||| ||    
T  29135896 aaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcttccaccatt 29135995  T
Q  118 ggttggttggaaac 131  Q
    ||| ||||||||||    
T  29135996 ggtgggttggaaac 29136009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 51683075 - 51683014
Alignment:
Q  21 gacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||||||| |||||||||| |||||||| ||||  |||||||| ||||||||||||||||    
T  51683075 gacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgcatg 51683014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 41219572 - 41219635
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcg 78  Q
    |||||||||||||| || |||||||||  |||||||||||||| |||||||||||| ||||||||    
T  41219572 ttctaaggacgtatacg-ggaataccaagttcgattctcaggaggaacaacgtttggccagtgcg 41219635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 31873886 - 31873957
Alignment:
Q  226 tgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattg 292  Q
    ||||||||||||||||||||||| ||||||     || || |||||||||||||||||||| ||||||||||    
T  31873886 tgtccattttagagaataattttatttcacaatacttgtccctttcaagtttcaatgcaacattaattattg 31873957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 928597 - 928647
Alignment:
Q  32 ggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||||||||    
T  928597 ggaataccagattcgattctcagggggaacaacacttgaccagtgcgcatg 928647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 10040536 - 10040652
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 113  Q
    ||||||||||||| ||| |||||| | | |||||||||||||  |||||||| ||| ||||||||||||  |||||  |||||||  | | | |||||||    
T  10040536 ttctaaggacgtacccggggaatatcgggttcgattctcagg-ggaacaacgcttggccagtgcgcatgcctctacgcacgagccggaatggtcgtccac 10040634  T
Q  114 cgttggttggttggaaac 131  Q
    | ||||| ||||||||||    
T  10040635 ctttggtgggttggaaac 10040652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 312
Target Start/End: Complemental strand, 37781152 - 37781099
Alignment:
Q  259 tcactttcaagtttcaatgcaacgttaattattggtttatcaataatacactta 312  Q
    |||||||||| ||||||| ||| ||||||||||||||| |||||||||| ||||    
T  37781152 tcactttcaaatttcaatccaaagttaattattggtttgtcaataataccctta 37781099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 19896994 - 19897038
Alignment:
Q  262 ctttcaagtttcaatgcaacgttaattattggtttatcaataata 306  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||||    
T  19896994 ctttcaagttttaatacaacattaattattggtttatcaataata 19897038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 52805074 - 52805142
Alignment:
Q  245 ttttgtttcacttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatacacttac 313  Q
    |||| ||| |||| ||||||||||||||| ||||||| || ||||||| ||||||||||| || |||||    
T  52805074 ttttattttacttgtcactttcaagtttcgatgcaacatttattattgatttatcaataacacccttac 52805142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 19912215 - 19912164
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttca 254  Q
    |||||||||||||||| ||||| ||||||||||||||||   ||||||||||    
T  19912215 tactccctccgtttcaaaatacatgtccattttagagaaattttttgtttca 19912164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 32873677 - 32873571
Alignment:
Q  13 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 112  Q
    |||| ||||||||| ||| |||||||||| ||||||||  |||  |||||||| ||||||||||| ||||  ||||| || |||||| ||||| || |||    
T  32873677 attccaaggacgtacccg-ggaataccaggttcgattcctagggagaacaacgcttgaccagtgcacatgcctctacgtatgagccagattagtcgccca 32873579  T
Q  113 ccgttggt 120  Q
    || |||||    
T  32873578 cctttggt 32873571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 38806382 - 38806331
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttca 254  Q
    |||||||||||||||| ||||| ||||||||||||||||   ||||||||||    
T  38806382 tactccctccgtttcaaaatacatgtccattttagagaaattttttgtttca 38806331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 44276771 - 44276826
Alignment:
Q  199 atattactccctccgtttcataatacttgtccattttagagaataattttgtttca 254  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||   ||||||||||    
T  44276771 atattactctctccgtttcaaaatacatgtccattttagagaaattttttgtttca 44276826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 390
Target Start/End: Original strand, 53559723 - 53559774
Alignment:
Q  339 ttacctatttattgtagagggataaataatagaatgaaataataaatgggta 390  Q
    |||| ||||||||||||||  |||||||||| |||||||||||||| |||||    
T  53559723 ttacttatttattgtagagaaataaataataaaatgaaataataaacgggta 53559774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 1455207 - 1455257
Alignment:
Q  254 acttatcactttcaagtttcaatgcaacgttaattattggtttatcaataa 304  Q
    |||| |||||||| | |||||||||||| |||||||||||||| |||||||    
T  1455207 acttgtcactttccaatttcaatgcaacattaattattggtttgtcaataa 1455257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 19897063 - 19897122
Alignment:
Q  362 aaataatagaatgaaataataaatgggtataagggtattatag-aaaaatacaaagaatttc 422  Q
    ||||||||||||||||||||||| | |  |||||||||||||| ||||| ||||||||||||    
T  19897063 aaataatagaatgaaataataaaagag--taagggtattatagaaaaaacacaaagaatttc 19897122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 376
Target Start/End: Complemental strand, 37293577 - 37293539
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaa 376  Q
    |||||||||||||||||||| || |||||||||||||||    
T  37293577 cttacctatttattgtagagagagaaataatagaatgaa 37293539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 198852 - 198893
Alignment:
Q  200 tattactccctccgtttcataatacttgtccattttagagaa 241  Q
    ||||||||||||||||||| ||||| |||||||||| |||||    
T  198852 tattactccctccgtttcaaaatacatgtccattttggagaa 198893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 37293432 - 37293469
Alignment:
Q  198 gatattactccctccgtttcataatacttgtccatttt 235  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  37293432 gataatactccctccgtttcacaatacttgtccatttt 37293469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 43750296 - 43750234
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    |||||||||| ||| || ||| ||||||||||||||||||||||   |||| |||||||||||||    
T  43750296 tatttattgttgagagagaaaaaatagaatgaaataataaatgg--ttaagtgtattatagaaaa 43750234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 409
Target Start/End: Complemental strand, 46188926 - 46188862
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    |||||||||||||| || |||||||| ||||||||||||||    | |||||||||||||||||||    
T  46188926 tatttattgtagagagagaaataatataatgaaataataaaatcat-taagggtattatagaaaaa 46188862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 53559667 - 53559720
Alignment:
Q  254 acttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatac 307  Q
    |||| ||||| ||||||||||||||||| ||||| |||| ||||| ||||||||    
T  53559667 acttgtcactctcaagtttcaatgcaacattaatcattgatttattaataatac 53559720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 6462395 - 6462459
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||| | |||||||| | |||||||| ||||  |||||||| ||| ||||||||||||    
T  6462395 aaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatg 6462459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 409
Target Start/End: Complemental strand, 6901721 - 6901660
Alignment:
Q  346 tttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    |||||||| ||| || |||||| |||||||||||||||||| |  ||||||||||| |||||||    
T  6901721 tttattgttgagagagaaataacagaatgaaataataaatgag--taagggtattagagaaaaa 6901660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 25294943 - 25295067
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||||| | || ||||||| ||   ||||||  ||| ||||||||||||  ||||   | |||||  ||||| |||||||| ||    
T  25294943 aaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgcatgcctctatgcatgagccggattagtcgtccaccatt 25295042  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||||||||| |||||||||||    
T  25295043 ggtgggttggaaaccggtgcgaaag 25295067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 47219127 - 47219251
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||||||| |||||||| || |   ||||||| ||| | ||||||||||  |||||  | |||||  ||||| |||||||| ||    
T  47219127 aaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtcgtccaccttt 47219226  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    | | ||| ||||| |||||||||||    
T  47219227 gatgggtcggaaaccggtgcgaaag 47219251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 49082803 - 49082871
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||||||||| ||||||||   |||||||| ||||  |||||||| ||  ||||||||||||    
T  49082803 ttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcatg 49082871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 52009106 - 52009158
Alignment:
Q  254 acttatcactttcaagtttcaatgcaacgttaattattggtttatcaataata 306  Q
    |||| ||||||||||||||| ||||||| ||||||||||  || |||||||||    
T  52009106 acttgtcactttcaagtttcgatgcaacattaattattgtcttgtcaataata 52009158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 52364924 - 52364860
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||| ||| ||||||||   |||||||| ||| | |||||||| ||||||||||||||||    
T  52364924 aaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatg 52364860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 17942720 - 17942605
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgttt-----cacttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||      |||| ||||||||||||||||||||||| |||||||||| |||     
T  17942720 tactccctccgtttcataatacttgtccattttggagaataattttgttttataatacttgtcactttcaagtttcaatgcaacattaattattgttttg 17942621  T
Q  298 tcaataatacacttac 313  Q
    |||||||||| |||||    
T  17942620 tcaataatacccttac 17942605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 7761577 - 7761468
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||  |||||||||  |||     
T  7761577 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatatttgtcactttcaagtttcaatgcaatattaattattattttg 7761478  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  7761477 tcaataatac 7761468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 8626759 - 8626650
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     || || |||||||||||||||||||| ||||||||||  ||     
T  8626759 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttg 8626660  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  8626659 tcaataatac 8626650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 13757484 - 13757375
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||| ||||||||||  ||     
T  13757484 tactccatccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttg 13757385  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  13757384 tcaataatac 13757375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 29260469 - 29260354
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||     |||| ||| ||||||||||||||||||| ||||||| ||  ||     
T  29260469 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcattttcaagtttcaatgcaacattaattactgtcttg 29260370  T
Q  298 tcaataatacacttac 313  Q
    |||||||||| |||||    
T  29260369 tcaataatacccttac 29260354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 1605855 - 1605746
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||     |||| |||||||||| ||||||| |||| ||||||||||  ||     
T  1605855 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttg 1605756  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  1605755 tcaataatac 1605746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 15064695 - 15064804
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||     |||| |||||||||||||||||| |||| ||||||||||  ||     
T  15064695 tactccctccgtttcataatacttgtccattttggagaataattttgtttcataatacttgtcactttcaagtttcaatacaacattaattattgtcttg 15064794  T
Q  298 tcaataatac 307  Q
    ||||||||||    
T  15064795 tcaataatac 15064804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 4129706 - 4129614
Alignment:
Q  200 tattactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaat 287  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     || ||||||||||||||||||||||| |||||    
T  4129706 tattactccctccgtttcataatacttgtccattttagaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaat 4129614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 8235895 - 8235787
Alignment:
Q  210 tccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtttatcaataa 304  Q
    |||||||||||||||||||| |||||||||||||||||||||||||     || ||||||||||||||||||||||  ||||||||||  ||||||||||    
T  8235895 tccgtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaatattaattattgtcttatcaataa 8235796  T
Q  305 tacacttac 313  Q
    ||| |||||    
T  8235795 tacccttac 8235787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 203 - 292
Target Start/End: Original strand, 31559738 - 31559832
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgttt-----cacttatcactttcaagtttcaatgcaacgttaattattg 292  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||      |||| | ||||||||||||||||||||| ||||||||||    
T  31559738 tactccctccgtttcataatacttctccattttagagaataattttattttacaatacttgttactttcaagtttcaatgcaacattaattattg 31559832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 14287153 - 14287071
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaaatacaaagaatttc 422  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||| |||  |||||||||||||||||||  || ||||||||    
T  14287153 cttacctagttattgtagagagataaataataaaatgaaataataaagggg--taagggtattatagaaaaaagcacagaatttc 14287071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 30734481 - 30734592
Alignment:
Q  201 attactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggtt 295  Q
    |||||| ||||| |||||||||||||||||||||| || ||||||||||||| ||     || ||| |||||| |||||||||||| |||||||||   |    
T  30734481 attacttcctccttttcataatacttgtccattttggaaaataattttgttttacaatagttgtcattttcaaatttcaatgcaacattaattattatct 30734580  T
Q  296 tatcaataatac 307  Q
    ||||||||||||    
T  30734581 tatcaataatac 30734592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 12606421 - 12606541
Alignment:
Q  22 acgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggtt 121  Q
    ||||||||| ||||||||||||||||||  ||||  |||||||||||| ||||||||||||  |||||  |||||||  ||||| || ||||| |||||     
T  12606421 acgtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtg 12606520  T
Q  122 ggttggaaa-cggtgcgaaag 141  Q
     | |||||| |||||||||||    
T  12606521 agctggaaaccggtgcgaaag 12606541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 3601075 - 3601195
Alignment:
Q  22 acgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggtt 121  Q
    |||||| || |||||||| | |||||||||||||  |||||||| ||| ||||||||||||  | |||  |||||||  ||||| |||||||| |||||     
T  3601075 acgtattcggggaataccggtttcgattctcagggggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtg 3601174  T
Q  122 ggttggaaa-cggtgcgaaag 141  Q
    ||| ||||| |||||||||||    
T  3601175 ggtcggaaaccggtgcgaaag 3601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 13468920 - 13469044
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||||||| ||| ||||  |||  |||||||| |||  |||||| ||||  |||||  |||||||| ||||| || ||||| ||    
T  13468920 aaggacgtatccggggaataccaggttcaattcctagggggaacaacgattggtcagtgcacatgcctctacgcacgagccagattagtcgcccaccatt 13469019  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||||||||| |||||||||||    
T  13469020 ggtgggttggaaaccggtgcgaaag 13469044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 19089485 - 19089609
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    |||||||||||||||||||||||| || ||||| ||||  |||||||  ||| |||||| |||||  |||||  |||||||  ||||| |||| ||| ||    
T  19089485 aaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtgagcatgcctctacgcacgagccggattagtcgtctaccttt 19089584  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||| ||||| |||||||||||    
T  19089585 ggtgggtcggaaaccggtgcgaaag 19089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 21898635 - 21898699
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||||||||| |||||||| | |||||||| ||||| |||||||| ||| ||||||||||||    
T  21898635 aaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatg 21898699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 3798320 - 3798261
Alignment:
Q  254 acttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatacacttac 313  Q
    |||| |||||||||||||| |||||||| ||||||||  ||||||||||||||| |||||    
T  3798320 acttgtcactttcaagttttaatgcaacattaattatgagtttatcaataatacccttac 3798261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 387
Target Start/End: Original strand, 11370597 - 11370646
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgg 387  Q
    |||||||||||||||||||| || ||||||| ||||| ||||||||||||    
T  11370597 cttacctatttattgtagagagaaaaataatcgaatggaataataaatgg 11370646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 34954742 - 34954629
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||| | | |||||||||| |||||||||||||  |||||||||||| ||||||| |||   |||||  | |||||| ||||| |||||||| ||    
T  34954742 aaggacgtacctggggaataccaggttcgattctcagggggaacaacgtttggccagtgcacatacctctacgcatgagccagattagtcgtccaccttt 34954643  T
Q  118 ggttggttggaaac 131  Q
    | | ||| ||||||    
T  34954642 gatgggtcggaaac 34954629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 6606220 - 6606096
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||||||||||| |||||||| | |||||||||||||  |||||||  ||| ||||||  ||||  |||||  | |||||  ||||| |||||||| ||    
T  6606220 aaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgagccggattagtcgtccaccatt 6606121  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||| ||||| |||||||||||    
T  6606120 ggtgggtcggaaaccggtgcgaaag 6606096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 13584573 - 13584509
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    |||||||||  ||||||||||||| ||||||||  | || |||||||||||| ||||||||||||    
T  13584573 aaggacgtactcgaggaataccaggttcgattcctaagatgaacaacgtttggccagtgcgcatg 13584509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 254
Target Start/End: Original strand, 19996322 - 19996373
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttca 254  Q
    |||||||||||||||| ||||| ||||||||||||||||   ||||||||||    
T  19996322 tactccctccgtttcaaaatacatgtccattttagagaaattttttgtttca 19996373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 8235791 - 8235721
Alignment:
Q  338 cttacctatttattgtagagggataaataa--tagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    ||||| |||||||||||||| |||||| ||  ||||||||||||||||||  |  ||||||||||||||||||    
T  8235791 cttacatatttattgtagagagataaaaaaaatagaatgaaataataaat--gattaagggtattatagaaaa 8235721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 15064971 - 15064933
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaa 241  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  15064971 tactccctccgtttcaaaatacatgtccattttagagaa 15064933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 33939994 - 33940092
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 112  Q
    |||||||||||||||||||||||||  | || ||||||||||| ||||||   || |||| ||||||||  |||||  |||||||  ||||| ||||||    
T  33939994 ttctaaggacgtatccgaggaatactgggtttgattctcaggaggaacaatacttaaccattgcgcatgcctctacacacgagccggattagtcgtcca 33940092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 1605738 - 1605676
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    |||||||||||||| || ||| |||| |||||||||||||||  |  ||||||||||||||||||    
T  1605738 tatttattgtagagagagaaaaaataaaatgaaataataaat--gattaagggtattatagaaaa 1605676  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 2271424 - 2271330
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccacc 114  Q
    |||||||||| || |||||||| | ||||||||||||   |||||||| ||  ||||||||||||| |||||  |||||||  ||||| ||||||||    
T  2271424 aaggacgtattcggggaataccgggttcgattctcaga--gaacaacgcttagccagtgcgcatgtctctacgcacgagccggattagtcgtccacc 2271330  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 8938705 - 8938822
Alignment:
Q  25 tatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggttggt 124  Q
    |||||| |||||||  | |||||||| ||||| |||||||  |||||||||||||| |  |||||  | ||||| |||||| |||||||| ||| | |||    
T  8938705 tatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgcgcaagcatctacgcatgagccgaattagtcgtccacctttgatgggt 8938804  T
Q  125 tggaaa-cggtgcgaaag 141  Q
     ||||| |||||||||||    
T  8938805 cggaaaccggtgcgaaag 8938822  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 14107478 - 14107417
Alignment:
Q  21 gacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 82  Q
    ||||||| || |||||||| | |||||||| ||||| |||||||| ||||||||||| ||||    
T  14107478 gacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatg 14107417  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 13036127 - 13036003
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    |||||||||| || |||||| | | ||||||| |||||  |||||||  ||| ||||||||||||  |||||  | |||||| ||||| |||||||  ||    
T  13036127 aaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattagtcgtccactatt 13036028  T
Q  118 ggttggttggaaa-cggtgcgaaag 141  Q
    ||| ||| ||||| |||||||||||    
T  13036027 ggtgggtcggaaaccggtgcgaaag 13036003  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 405
Target Start/End: Complemental strand, 17942609 - 17942545
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattataga 405  Q
    ||||| |||||||||||||| || ||| |||| |||||||||||||||||   |||||||||||||||    
T  17942609 cttacatatttattgtagagagaaaaa-aataaaatgaaataataaatgg--ttaagggtattataga 17942545  T

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Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 387
Target Start/End: Complemental strand, 26860929 - 26860881
Alignment:
Q  339 ttacctatttattgtagagggataaataatagaatgaaataataaatgg 387  Q
    |||||||||||||  |||| || |||||||||||| |||||||||||||    
T  26860929 ttacctatttattacagagagagaaataatagaataaaataataaatgg 26860881  T

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Target: scaffold1770 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 441 - 349
Alignment:
Q  200 tattactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaat 287  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     || ||||||||||||||||||||||| |||||    
T  441 tattactccctccgtttcataatacttgtccattttagaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaat 349  T

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Target: scaffold0054 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 306
Target Start/End: Complemental strand, 45733 - 45622
Alignment:
Q  200 tattactccctccgtttcataatacttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggt 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||     || | || ||||||| |||||||||||  ||||||||||      
T  45733 tattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacatgtctctttcaaatttcaatgcaatattaattattgta 45634  T
Q  295 ttatcaataata 306  Q
    ||||||||||||    
T  45633 ttatcaataata 45622  T

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Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 45613 - 45551
Alignment:
Q  344 tatttattgtagagggataaataatagaatgaaataataaatgggtataagggtattatagaaaa 408  Q
    |||||||||||||  || ||| |||||||| |||||||||||||   ||||||||||||||||||    
T  45613 tatttattgtagaaagagaaaaaatagaataaaataataaatgg--ttaagggtattatagaaaa 45551  T

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Target: scaffold0168 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 7945 - 7830
Alignment:
Q  203 tactccctccgtttcataatacttgtccattttagagaataattttgtttcac-----ttatcactttcaagtttcaatgcaacgttaattattggttta 297  Q
    |||||| || |||||| ||||||||||  ||||| |||||||||||  |||||     || |||||||||||||| |||||||| |||||||| |||||     
T  7945 tactccatctgtttcacaatacttgtcgtttttaaagaataattttaattcacattacttgtcactttcaagttttaatgcaacattaattatcggtttg 7846  T
Q  298 tcaataatacacttac 313  Q
    |||||||||| |||||    
T  7845 tcaataatactcttac 7830  T

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Target: scaffold0168; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 384
Target Start/End: Complemental strand, 7834 - 7788
Alignment:
Q  338 cttacctatttattgtagagggataaataatagaatgaaataataaa 384  Q
    ||||||||||||||||| || || ||| |||||||||||||||||||    
T  7834 cttacctatttattgtaaagagagaaacaatagaatgaaataataaa 7788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 287 - 375
Alignment:
Q  223 acttgtccattttagagaataattttgtttc-----acttatcactttcaagtttcaatgcaacgttaattattggtttatcaataata 306  Q
    |||||||||||||||||||||||||||||||     |||| ||||||| || ||| |||||||| ||||||||||  || |||||||||    
T  287 acttgtccattttagagaataattttgtttcacaatacttgtcacttttaaattttaatgcaacattaattattgtcttgtcaataata 375  T

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Target: scaffold0170 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 9831 - 9933
Alignment:
Q  18 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 117  Q
    ||||| ||||| |||||||||| |||||||||  ||||  |||||||| ||| ||||||||||||  |||||  |||||||  ||||| |||||||| ||    
T  9831 aaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccaccttt 9930  T
Q  118 ggt 120  Q
    |||    
T  9931 ggt 9933  T

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Target: scaffold0939 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0939
Description:

Target: scaffold0939; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 1171 - 1110
Alignment:
Q  245 ttttgtttcacttatcactttcaagtttcaatgcaacgttaattattggtttatcaataata 306  Q
    |||| ||| |||| ||| ||| ||||||| ||||||| ||||||||||||||||||||||||    
T  1171 ttttattttacttgtcatttttaagtttcgatgcaacattaattattggtttatcaataata 1110  T

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Target: scaffold0076 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 15386 - 15438
Alignment:
Q  261 actttcaagtttcaatgcaacgttaattattggtttatcaataatacacttac 313  Q
    ||||| ||||||||||||||| |||||||| ||||| |||||||||| |||||    
T  15386 acttttaagtttcaatgcaacattaattatcggtttgtcaataatacgcttac 15438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 65199 - 65279
Alignment:
Q  237 gagaataattttgtttca-----cttatcactttcaagtttcaatgcaacgttaattattggtttatcaataatacactta 312  Q
    ||||||||||||||||||     ||| ||||||| || |||||||||||  |||||||||||||| |||||||||| ||||    
T  65199 gagaataattttgtttcatattacttgtcacttttaaatttcaatgcaatattaattattggtttgtcaataataccctta 65279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 409
Target Start/End: Original strand, 65303 - 65344
Alignment:
Q  366 aatagaatgaaataataaatgggtataagggtattatagaaaaa 409  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  65303 aatagaatgaaataataaatgg--ttaagggtattatagaaaaa 65344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 2210 - 2143
Alignment:
Q  21 gacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttcta 88  Q
    |||||||||||| |||||| |||||||||||||| | |||||||| ||||  || ||||||| |||||    
T  2210 gacgtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttcta 2143  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 249432 - 249369
Alignment:
Q  14 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgc 77  Q
    ||||||||||||||  | |||||||||| |||||||||||||  ||| |||| |||||||||||    
T  249432 ttctaaggacgtatttggggaataccaggttcgattctcagggagaataacgcttgaccagtgc 249369  T

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Target: scaffold0257 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 23916 - 23862
Alignment:
Q  200 tattactccctccgtttcataatacttgtccattttagagaataattttgtttca 254  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||   ||||||||||    
T  23916 tattactccatccgtttcaaaatacatgtccattttagagaaattttttgtttca 23862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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