View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3697_low_25 (Length: 234)

Name: NF3697_low_25
Description: NF3697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3697_low_25
NF3697_low_25
[»] chr4 (73 HSPs)
chr4 (97-216)||(7706335-7706454)
chr4 (97-216)||(47417537-47417656)
chr4 (97-216)||(56372399-56372517)
chr4 (92-216)||(18582803-18582926)
chr4 (97-216)||(8829877-8829996)
chr4 (97-216)||(19513944-19514062)
chr4 (97-216)||(28307218-28307337)
chr4 (97-216)||(42116859-42116978)
chr4 (97-216)||(55495942-55496061)
chr4 (96-217)||(8941867-8941987)
chr4 (97-216)||(22038419-22038538)
chr4 (97-216)||(35777448-35777567)
chr4 (98-216)||(46895246-46895365)
chr4 (119-216)||(53407174-53407271)
chr4 (97-216)||(11600646-11600765)
chr4 (97-216)||(12234029-12234148)
chr4 (97-216)||(37115345-37115463)
chr4 (119-216)||(39087620-39087717)
chr4 (123-216)||(45906128-45906221)
chr4 (97-216)||(4517253-4517372)
chr4 (119-216)||(4392787-4392884)
chr4 (131-216)||(11152001-11152086)
chr4 (131-216)||(27397828-27397913)
chr4 (131-216)||(29663926-29664011)
chr4 (123-216)||(52669983-52670076)
chr4 (96-216)||(29656600-29656720)
chr4 (97-216)||(43225739-43225858)
chr4 (97-208)||(45780807-45780918)
chr4 (97-216)||(55764523-55764641)
chr4 (97-216)||(55828967-55829086)
chr4 (134-216)||(31678969-31679051)
chr4 (119-216)||(22892513-22892610)
chr4 (119-216)||(22944177-22944274)
chr4 (131-216)||(23867931-23868016)
chr4 (119-208)||(25199366-25199455)
chr4 (131-216)||(33005190-33005275)
chr4 (97-216)||(9043672-9043791)
chr4 (131-214)||(36008069-36008152)
chr4 (131-216)||(29413528-29413613)
chr4 (119-216)||(35822361-35822458)
chr4 (119-216)||(53273103-53273200)
chr4 (114-216)||(35581007-35581109)
chr4 (131-216)||(25440546-25440631)
chr4 (131-216)||(35468012-35468097)
chr4 (128-216)||(29656755-29656843)
chr4 (97-216)||(37970258-37970376)
chr4 (131-216)||(3009708-3009793)
chr4 (131-216)||(4355654-4355739)
chr4 (131-216)||(4939448-4939532)
chr4 (144-216)||(21369890-21369962)
chr4 (136-216)||(37831924-37832004)
chr4 (124-216)||(55856589-55856678)
chr4 (138-216)||(33114979-33115057)
chr4 (172-216)||(9032057-9032101)
chr4 (92-216)||(15635900-15636024)
chr4 (98-214)||(44442046-44442162)
chr4 (138-216)||(56270153-56270231)
chr4 (129-208)||(17715579-17715658)
chr4 (174-216)||(23162641-23162683)
chr4 (138-216)||(26826525-26826603)
chr4 (119-216)||(51011127-51011225)
chr4 (131-216)||(4391770-4391855)
chr4 (172-216)||(5465472-5465516)
chr4 (119-216)||(31338562-31338661)
chr4 (177-216)||(35842657-35842696)
chr4 (173-216)||(55358400-55358443)
chr4 (138-216)||(11050320-11050399)
chr4 (174-216)||(30366208-30366250)
chr4 (119-163)||(19169165-19169209)
chr4 (136-216)||(23113538-23113618)
chr4 (124-216)||(25235135-25235227)
chr4 (127-161)||(45520101-45520135)
chr4 (179-216)||(44525659-44525696)
[»] chr6 (34 HSPs)
chr6 (97-216)||(31452015-31452134)
chr6 (97-216)||(2442391-2442510)
chr6 (97-214)||(34903926-34904043)
chr6 (100-216)||(31100076-31100192)
chr6 (97-216)||(30811210-30811329)
chr6 (114-216)||(34232976-34233078)
chr6 (100-216)||(20804960-20805075)
chr6 (97-216)||(12297331-12297450)
chr6 (119-216)||(32731747-32731844)
chr6 (97-216)||(1806376-1806494)
chr6 (131-216)||(10856133-10856218)
chr6 (97-214)||(29414974-29415091)
chr6 (96-216)||(14227597-14227716)
chr6 (131-216)||(558360-558446)
chr6 (129-216)||(33453734-33453821)
chr6 (138-216)||(12432682-12432760)
chr6 (131-216)||(34685077-34685161)
chr6 (100-216)||(7317672-7317788)
chr6 (131-213)||(3108071-3108153)
chr6 (138-216)||(33540787-33540865)
chr6 (137-218)||(29823095-29823176)
chr6 (131-216)||(34439683-34439768)
chr6 (97-216)||(6709757-6709869)
chr6 (119-216)||(3636702-3636798)
chr6 (131-216)||(11015590-11015675)
chr6 (131-216)||(28076423-28076508)
chr6 (138-216)||(5681527-5681605)
chr6 (174-216)||(5943035-5943077)
chr6 (138-216)||(5301663-5301741)
chr6 (176-216)||(31049379-31049419)
chr6 (178-216)||(2970722-2970760)
chr6 (138-216)||(7292610-7292688)
chr6 (138-216)||(23648201-23648279)
chr6 (147-216)||(6104732-6104801)
[»] chr5 (59 HSPs)
chr5 (92-216)||(12713273-12713397)
chr5 (92-216)||(12774537-12774661)
chr5 (97-216)||(2236568-2236687)
chr5 (97-216)||(30412664-30412783)
chr5 (97-216)||(1711255-1711374)
chr5 (97-216)||(5591555-5591673)
chr5 (97-216)||(2671380-2671499)
chr5 (97-216)||(39744594-39744712)
chr5 (119-216)||(14647409-14647506)
chr5 (123-216)||(24793964-24794057)
chr5 (97-216)||(36685782-36685901)
chr5 (97-216)||(39275390-39275508)
chr5 (114-216)||(8024036-8024138)
chr5 (97-216)||(13228525-13228643)
chr5 (114-216)||(30299681-30299783)
chr5 (119-216)||(4221525-4221622)
chr5 (119-216)||(19956359-19956456)
chr5 (97-216)||(1174750-1174869)
chr5 (97-216)||(32382815-32382934)
chr5 (97-216)||(29392159-29392279)
chr5 (97-216)||(10697235-10697354)
chr5 (97-216)||(30774244-30774363)
chr5 (95-216)||(9587238-9587360)
chr5 (131-216)||(5997946-5998031)
chr5 (119-216)||(32381726-32381823)
chr5 (97-216)||(6603962-6604081)
chr5 (97-216)||(19525715-19525834)
chr5 (129-216)||(26699158-26699245)
chr5 (129-216)||(26968891-26968978)
chr5 (138-216)||(43402451-43402529)
chr5 (131-216)||(9160744-9160829)
chr5 (131-216)||(27130333-27130418)
chr5 (131-216)||(35235779-35235864)
chr5 (131-216)||(39246889-39246973)
chr5 (117-216)||(12363664-12363764)
chr5 (97-217)||(25872259-25872379)
chr5 (96-216)||(31169039-31169159)
chr5 (97-216)||(13156938-13157057)
chr5 (97-216)||(15443422-15443541)
chr5 (98-216)||(35236719-35236838)
chr5 (119-216)||(11663943-11664040)
chr5 (96-216)||(3037477-3037597)
chr5 (119-216)||(6893431-6893527)
chr5 (138-217)||(36028042-36028121)
chr5 (129-216)||(5381996-5382082)
chr5 (138-216)||(5521305-5521383)
chr5 (138-216)||(15530442-15530520)
chr5 (119-216)||(3670266-3670363)
chr5 (129-216)||(11062959-11063047)
chr5 (97-216)||(35639907-35640025)
chr5 (138-216)||(648538-648616)
chr5 (173-216)||(2178802-2178845)
chr5 (173-216)||(4379300-4379343)
chr5 (173-216)||(7651682-7651725)
chr5 (119-216)||(3669529-3669626)
chr5 (172-216)||(22977257-22977301)
chr5 (131-216)||(19347705-19347791)
chr5 (131-216)||(11100814-11100899)
chr5 (176-216)||(9627206-9627246)
[»] chr3 (78 HSPs)
chr3 (92-216)||(25570341-25570465)
chr3 (97-216)||(37528789-37528908)
chr3 (91-216)||(35499563-35499687)
chr3 (97-216)||(8872840-8872959)
chr3 (97-216)||(37088251-37088370)
chr3 (97-216)||(45345074-45345192)
chr3 (92-216)||(44748852-44748975)
chr3 (97-216)||(26540927-26541046)
chr3 (97-216)||(28676956-28677075)
chr3 (97-216)||(44545198-44545316)
chr3 (97-216)||(46248030-46248148)
chr3 (119-216)||(16127205-16127302)
chr3 (119-216)||(29081347-29081444)
chr3 (119-216)||(38185759-38185856)
chr3 (123-216)||(40563429-40563522)
chr3 (124-217)||(40480086-40480179)
chr3 (127-216)||(44845621-44845710)
chr3 (97-216)||(2579993-2580112)
chr3 (97-216)||(52857863-52857982)
chr3 (98-216)||(24536620-24536738)
chr3 (119-216)||(38892052-38892149)
chr3 (131-216)||(39469914-39469999)
chr3 (97-216)||(19948384-19948503)
chr3 (97-216)||(29718267-29718385)
chr3 (97-216)||(41785776-41785895)
chr3 (97-216)||(52166156-52166275)
chr3 (97-216)||(54672246-54672364)
chr3 (131-216)||(37714031-37714116)
chr3 (131-216)||(52794896-52794981)
chr3 (131-216)||(55305175-55305260)
chr3 (131-216)||(4240279-4240364)
chr3 (119-216)||(21707140-21707237)
chr3 (131-216)||(43525744-43525829)
chr3 (131-216)||(53779032-53779117)
chr3 (136-216)||(24628265-24628345)
chr3 (129-216)||(42217662-42217749)
chr3 (97-216)||(46972000-46972119)
chr3 (119-216)||(47897672-47897769)
chr3 (119-216)||(49853109-49853206)
chr3 (131-216)||(54542001-54542086)
chr3 (129-216)||(30814316-30814403)
chr3 (97-216)||(33391870-33391989)
chr3 (97-216)||(50499730-50499848)
chr3 (119-216)||(46318825-46318923)
chr3 (131-216)||(48942992-48943075)
chr3 (131-216)||(50317095-50317180)
chr3 (131-216)||(52225286-52225371)
chr3 (97-216)||(30864395-30864512)
chr3 (131-217)||(193398-193484)
chr3 (94-216)||(12063794-12063916)
chr3 (138-216)||(39876622-39876700)
chr3 (138-216)||(41246257-41246335)
chr3 (136-216)||(46627563-46627644)
chr3 (119-216)||(47173557-47173654)
chr3 (92-164)||(52363004-52363076)
chr3 (144-216)||(2851831-2851903)
chr3 (119-216)||(35100176-35100275)
chr3 (97-201)||(51950323-51950427)
chr3 (173-214)||(52931200-52931241)
chr3 (172-216)||(2121869-2121913)
chr3 (136-216)||(45693472-45693552)
chr3 (178-216)||(21603846-21603884)
chr3 (102-164)||(24536807-24536869)
chr3 (97-216)||(45368577-45368696)
chr3 (97-216)||(48378193-48378312)
chr3 (174-216)||(51709055-51709097)
chr3 (176-216)||(30548790-30548830)
chr3 (119-216)||(42465093-42465190)
chr3 (131-187)||(52788677-52788733)
chr3 (119-164)||(28394172-28394217)
chr3 (176-216)||(43740344-43740384)
chr3 (131-216)||(44947267-44947352)
chr3 (97-145)||(53779005-53779053)
chr3 (119-154)||(889701-889736)
chr3 (176-207)||(32982980-32983011)
chr3 (131-186)||(5505852-5505907)
chr3 (131-164)||(2187314-2187347)
chr3 (131-164)||(31558316-31558349)
[»] scaffold0122 (1 HSPs)
scaffold0122 (97-216)||(12778-12897)
[»] chr8 (49 HSPs)
chr8 (97-216)||(28709273-28709392)
chr8 (97-216)||(28716630-28716749)
chr8 (97-216)||(25023272-25023391)
chr8 (97-216)||(17081620-17081739)
chr8 (97-216)||(36681508-36681626)
chr8 (97-216)||(38171488-38171607)
chr8 (119-216)||(31581682-31581779)
chr8 (123-216)||(32541215-32541308)
chr8 (97-216)||(1893902-1894022)
chr8 (124-216)||(31478069-31478161)
chr8 (92-216)||(45141516-45141639)
chr8 (97-216)||(39702272-39702391)
chr8 (119-216)||(17115526-17115623)
chr8 (119-216)||(44827378-44827475)
chr8 (97-216)||(10618773-10618891)
chr8 (100-216)||(39871235-39871349)
chr8 (131-216)||(27781102-27781187)
chr8 (119-216)||(42142796-42142893)
chr8 (123-216)||(43276832-43276925)
chr8 (97-216)||(22877986-22878105)
chr8 (97-216)||(8270870-8270991)
chr8 (131-216)||(41313375-41313460)
chr8 (96-216)||(16422795-16422914)
chr8 (97-216)||(6338284-6338403)
chr8 (138-216)||(31688111-31688189)
chr8 (95-216)||(24652232-24652352)
chr8 (96-216)||(32099501-32099622)
chr8 (131-216)||(39320127-39320212)
chr8 (97-216)||(23676837-23676957)
chr8 (97-216)||(37587779-37587899)
chr8 (97-211)||(16831500-16831614)
chr8 (92-216)||(11298102-11298226)
chr8 (97-216)||(34395408-34395528)
chr8 (97-216)||(37560590-37560709)
chr8 (97-216)||(40223144-40223263)
chr8 (131-216)||(41693967-41694055)
chr8 (174-216)||(36112902-36112944)
chr8 (138-208)||(42203452-42203522)
chr8 (138-216)||(44157204-44157282)
chr8 (131-216)||(3427682-3427767)
chr8 (138-217)||(43849267-43849346)
chr8 (119-164)||(11741206-11741251)
chr8 (119-216)||(9210974-9211071)
chr8 (100-216)||(36590105-36590222)
chr8 (172-216)||(2642479-2642523)
chr8 (131-216)||(7378848-7378933)
chr8 (143-216)||(39747000-39747073)
chr8 (178-216)||(40551856-40551894)
chr8 (176-216)||(22957354-22957394)
[»] chr2 (54 HSPs)
chr2 (97-216)||(13111800-13111920)
chr2 (97-216)||(5039739-5039858)
chr2 (97-216)||(36999454-36999572)
chr2 (97-216)||(3377357-3377475)
chr2 (97-216)||(16486847-16486965)
chr2 (97-216)||(41322720-41322839)
chr2 (114-216)||(36712594-36712696)
chr2 (119-216)||(4453581-4453678)
chr2 (119-216)||(9886978-9887075)
chr2 (123-216)||(28382738-28382831)
chr2 (96-216)||(10839638-10839757)
chr2 (97-216)||(2266210-2266328)
chr2 (97-216)||(40025000-40025119)
chr2 (126-216)||(38579066-38579156)
chr2 (119-216)||(8689020-8689117)
chr2 (123-216)||(15521469-15521562)
chr2 (96-216)||(37356132-37356252)
chr2 (96-216)||(650838-650957)
chr2 (124-216)||(18212111-18212203)
chr2 (97-216)||(21865210-21865330)
chr2 (97-216)||(2546382-2546501)
chr2 (97-216)||(6760662-6760781)
chr2 (119-216)||(8815199-8815296)
chr2 (129-216)||(10393093-10393180)
chr2 (97-208)||(18710155-18710265)
chr2 (119-216)||(4038398-4038495)
chr2 (97-216)||(24402110-24402222)
chr2 (91-216)||(26911470-26911594)
chr2 (131-216)||(43507620-43507705)
chr2 (124-216)||(4385583-4385675)
chr2 (132-216)||(31616444-31616528)
chr2 (17-76)||(37560721-37560780)
chr2 (138-216)||(39167756-39167834)
chr2 (119-216)||(43135603-43135700)
chr2 (119-216)||(6232338-6232435)
chr2 (119-216)||(13527962-13528059)
chr2 (131-216)||(17263811-17263896)
chr2 (136-216)||(7400449-7400529)
chr2 (131-216)||(29514832-29514916)
chr2 (98-216)||(38880840-38880959)
chr2 (129-216)||(40869417-40869504)
chr2 (97-216)||(41796800-41796919)
chr2 (97-214)||(6153509-6153625)
chr2 (119-217)||(8339965-8340063)
chr2 (172-216)||(43285657-43285701)
chr2 (100-216)||(44275630-44275745)
chr2 (138-216)||(8070678-8070756)
chr2 (127-216)||(10727824-10727913)
chr2 (173-216)||(38842875-38842918)
chr2 (174-216)||(42132708-42132750)
chr2 (124-208)||(7569776-7569861)
chr2 (173-216)||(7213719-7213762)
chr2 (131-164)||(13761777-13761810)
chr2 (131-163)||(22375955-22375987)
[»] chr7 (49 HSPs)
chr7 (97-216)||(10312098-10312217)
chr7 (97-216)||(42587452-42587570)
chr7 (97-216)||(43254070-43254189)
chr7 (97-216)||(45686985-45687103)
chr7 (123-216)||(36246445-36246538)
chr7 (97-216)||(32168800-32168919)
chr7 (97-216)||(43134372-43134490)
chr7 (102-216)||(44743689-44743803)
chr7 (119-216)||(21254766-21254863)
chr7 (131-216)||(27089725-27089810)
chr7 (131-216)||(27188491-27188576)
chr7 (119-216)||(40637229-40637326)
chr7 (119-216)||(42375852-42375948)
chr7 (97-216)||(40258824-40258943)
chr7 (97-216)||(47471031-47471149)
chr7 (97-216)||(36436121-36436239)
chr7 (119-216)||(21374622-21374719)
chr7 (131-216)||(31511301-31511386)
chr7 (97-216)||(21313858-21313979)
chr7 (119-216)||(483051-483148)
chr7 (119-216)||(9487396-9487493)
chr7 (131-216)||(35587580-35587665)
chr7 (131-216)||(40106074-40106159)
chr7 (131-216)||(48832122-48832207)
chr7 (92-216)||(44596572-44596696)
chr7 (97-216)||(48313493-48313611)
chr7 (127-216)||(33203737-33203826)
chr7 (131-216)||(45222142-45222227)
chr7 (97-216)||(21741938-21742058)
chr7 (97-216)||(36407195-36407314)
chr7 (98-216)||(47587174-47587290)
chr7 (139-216)||(21316653-21316730)
chr7 (119-216)||(49148321-49148418)
chr7 (124-216)||(27655742-27655834)
chr7 (136-216)||(38481286-38481366)
chr7 (97-216)||(17192511-17192629)
chr7 (138-216)||(19832059-19832137)
chr7 (172-216)||(33026918-33026962)
chr7 (131-216)||(34709234-34709319)
chr7 (172-216)||(48590756-48590800)
chr7 (124-216)||(11466108-11466200)
chr7 (129-216)||(28425680-28425767)
chr7 (131-216)||(1342777-1342862)
chr7 (141-216)||(9485727-9485802)
chr7 (130-216)||(17844544-17844630)
chr7 (131-216)||(23029790-23029876)
chr7 (172-216)||(12345136-12345180)
chr7 (173-217)||(38531250-38531294)
chr7 (174-216)||(22642320-22642362)
[»] chr1 (65 HSPs)
chr1 (97-216)||(31150471-31150589)
chr1 (97-216)||(33561941-33562060)
chr1 (97-216)||(36838741-36838860)
chr1 (97-216)||(42064363-42064481)
chr1 (97-216)||(30721669-30721789)
chr1 (97-216)||(7711000-7711119)
chr1 (97-216)||(26843721-26843840)
chr1 (97-216)||(29586129-29586247)
chr1 (123-216)||(1918021-1918114)
chr1 (119-216)||(13121630-13121727)
chr1 (119-216)||(39826592-39826689)
chr1 (97-216)||(2479131-2479249)
chr1 (97-216)||(17046699-17046818)
chr1 (97-216)||(47134577-47134695)
chr1 (119-216)||(17499931-17500028)
chr1 (119-216)||(26204266-26204363)
chr1 (119-216)||(44909832-44909929)
chr1 (97-216)||(33524498-33524617)
chr1 (94-216)||(15313211-15313332)
chr1 (119-216)||(19898954-19899051)
chr1 (119-216)||(38676481-38676578)
chr1 (124-216)||(2497919-2498011)
chr1 (119-216)||(36301151-36301247)
chr1 (97-216)||(32368385-32368504)
chr1 (97-216)||(34319359-34319478)
chr1 (131-216)||(50351036-50351121)
chr1 (100-216)||(29704130-29704246)
chr1 (131-216)||(38967510-38967594)
chr1 (96-216)||(1507789-1507910)
chr1 (102-216)||(3660920-3661034)
chr1 (130-216)||(49220519-49220605)
chr1 (131-216)||(322869-322954)
chr1 (131-216)||(3270663-3270747)
chr1 (119-216)||(15348816-15348913)
chr1 (119-216)||(25601978-25602075)
chr1 (131-216)||(46369809-46369896)
chr1 (97-216)||(30774056-30774170)
chr1 (131-216)||(34086970-34087055)
chr1 (124-216)||(29374327-29374419)
chr1 (97-198)||(9169048-9169149)
chr1 (131-216)||(39583100-39583185)
chr1 (173-216)||(37672396-37672439)
chr1 (173-216)||(37703716-37703759)
chr1 (174-216)||(28429076-28429118)
chr1 (97-216)||(50171343-50171462)
chr1 (100-216)||(8221281-8221397)
chr1 (92-163)||(22099688-22099758)
chr1 (97-208)||(7024813-7024924)
chr1 (174-216)||(22098965-22099007)
chr1 (98-216)||(36043346-36043465)
chr1 (174-216)||(49185231-49185273)
chr1 (119-216)||(51423030-51423128)
chr1 (136-217)||(34318415-34318496)
chr1 (180-216)||(43727074-43727110)
chr1 (123-216)||(50540768-50540861)
chr1 (177-216)||(9770019-9770058)
chr1 (175-216)||(30495241-30495282)
chr1 (175-216)||(42614181-42614222)
chr1 (138-216)||(49240327-49240405)
chr1 (172-216)||(3391165-3391209)
chr1 (131-216)||(7781210-7781295)
chr1 (97-159)||(13420422-13420484)
chr1 (119-164)||(40719490-40719535)
chr1 (187-216)||(49822213-49822242)
chr1 (138-208)||(52071222-52071292)
[»] scaffold0031 (1 HSPs)
scaffold0031 (92-216)||(126821-126944)
[»] scaffold0116 (1 HSPs)
scaffold0116 (97-216)||(22561-22680)
[»] scaffold0027 (1 HSPs)
scaffold0027 (97-208)||(41814-41924)
[»] scaffold1632 (1 HSPs)
scaffold1632 (97-216)||(98-217)
[»] scaffold0197 (2 HSPs)
scaffold0197 (97-214)||(28148-28265)
scaffold0197 (131-216)||(30238-30323)
[»] scaffold0075 (1 HSPs)
scaffold0075 (97-216)||(27195-27315)
[»] scaffold0246 (1 HSPs)
scaffold0246 (119-216)||(7045-7142)
[»] scaffold0009 (1 HSPs)
scaffold0009 (131-216)||(192013-192098)
[»] scaffold0002 (1 HSPs)
scaffold0002 (138-216)||(431265-431343)
[»] scaffold0011 (1 HSPs)
scaffold0011 (138-216)||(63851-63929)
[»] scaffold0166 (1 HSPs)
scaffold0166 (123-164)||(36347-36388)
[»] scaffold0087 (1 HSPs)
scaffold0087 (172-216)||(53082-53126)
[»] scaffold0016 (1 HSPs)
scaffold0016 (138-216)||(93447-93525)
[»] scaffold0362 (1 HSPs)
scaffold0362 (173-208)||(5451-5486)


Alignment Details
Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 7706335 - 7706454
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  7706335 gggtctgtttgggaaaaccaagaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 7706434  T
Q  197 catgagcttatagcttattt 216  Q
    |||||| |||||||||||||    
T  7706435 catgagtttatagcttattt 7706454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 47417656 - 47417537
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| || | |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  47417656 gggtctgtttgggaaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 47417557  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  47417556 catgagcttatagcttattt 47417537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 56372399 - 56372517
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  56372399 gggtctgtttgggaaa-ccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 56372497  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  56372498 catgagcttatagcttattt 56372517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 18582803 - 18582926
Alignment:
Q  92 atatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttt 191  Q
    |||| |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  18582803 atatagggtctgtttgggaaa-ccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttt 18582901  T
Q  192 ttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||| |||||||    
T  18582902 ttcaccatgagcttataacttattt 18582926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 8829996 - 8829877
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| || | |||| ||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  8829996 gggtctgtttgggaaaccccaaaaaagagcttttagtttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 8829897  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  8829896 catgagcttatagcttattt 8829877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 19514062 - 19513944
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| |||||||||       |||||||||||||||||||||||||    
T  19514062 gggtctgtttgggaaa-ccaaaaaaagagcttttagcttttagcttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcac 19513964  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  19513963 catgagcttatagcttattt 19513944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 28307218 - 28307337
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       |||| ||||| ||||||||||||||    
T  28307218 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctcggtttgataacactttttcac 28307317  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  28307318 catgagcttatagcttattt 28307337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 42116859 - 42116978
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |  | |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  42116859 gggtctgtttgggaaacctcaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 42116958  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  42116959 catgagcttatagcttattt 42116978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 55496061 - 55495942
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||   || |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  55496061 gggtctgtttgggaaactaaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 55495962  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  55495961 catgagcttatagcttattt 55495942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 96 - 217
Target Start/End: Original strand, 8941867 - 8941987
Alignment:
Q  96 cgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttca 195  Q
    ||||||||||||||||| |||| |||| |||||||| |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  8941867 cgggtctgtttgggaaa-ccaaaaaaagagcttttaacttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttca 8941965  T
Q  196 ccatgagcttatagcttatttt 217  Q
    ||||||||||||||||||||||    
T  8941966 ccatgagcttatagcttatttt 8941987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 22038538 - 22038419
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  22038538 gggtctgtttggttaaccccataaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 22038439  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  22038438 catgagcttatagcttattt 22038419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 35777567 - 35777448
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  35777567 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 35777468  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  35777467 catgagcttatagcttattt 35777448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 46895246 - 46895365
Alignment:
Q  98 ggtctgtttgggaaaaccaagaaaat-agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||| |||| ||||  |||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||||||||    
T  46895246 ggtctgtttgggaaacccaaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaatactttttcac 46895345  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  46895346 catgagcttatagcttattt 46895365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 53407174 - 53407271
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  53407174 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 53407271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 11600646 - 11600765
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||    
T  11600646 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctatgtttggtaacactttttcac 11600745  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  11600746 catgagcttatagcttattt 11600765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 12234148 - 12234029
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| ||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  12234148 gggtctgtttggttaaccccaaaaaagagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 12234049  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  12234048 catgagcttatagcttattt 12234029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 37115463 - 37115345
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| || ||||||||||||||||||||| ||||||||||||||||       | |||||||||||||||||||||||    
T  37115463 gggtctgtttgggaaa-ccaaaaaaagagtttttagcttttagcttatagcatataagctcgtttgacaaaaaaagttctgtttggtaacactttttcac 37115365  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  37115364 catgagcttatagcttattt 37115345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 39087717 - 39087620
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  39087717 aaaagagcttttagcttctagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 39087620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 45906128 - 45906221
Alignment:
Q  123 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  45906128 tagcttttaccttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 45906221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 4517372 - 4517253
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| ||||||||||||||| |||||||||||||||||||||||||       ||||||||||||||||| |||||||    
T  4517372 gggtctgtttggttaatcccaaaaaagagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacaccttttcac 4517273  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  4517272 catgagcttatagcttattt 4517253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 4392884 - 4392787
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  4392884 aaaagagcttttagtttttagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 4392787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 11152086 - 11152001
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  11152086 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 11152001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 27397913 - 27397828
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  27397913 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 27397828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 29663926 - 29664011
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  29663926 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 29664011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 52669983 - 52670076
Alignment:
Q  123 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  52669983 tagcttttagcttttagcttatagcttataagcttgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttattt 52670076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 29656720 - 29656600
Alignment:
Q  96 cgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttca 195  Q
    ||||||||||||| || ||| | |||| ||||||||||| ||| |||||||||| ||||||||||||||       ||||||||||||||||||||||||    
T  29656720 cgggtctgtttggtaacacccaaaaaagagcttttagctcttaccttatagcttttaagctcgtttgacaagaaaagctctgtttggtaacactttttca 29656621  T
Q  196 ccatgagcttatagcttattt 216  Q
    ||| |||||||||||||||||    
T  29656620 ccacgagcttatagcttattt 29656600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 43225858 - 43225739
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttca 195  Q
    |||||||||||||||| |||| |||| ||||||||| ||||||||||||||||||||| | |||||||        ||||||||||||||||||||||||    
T  43225858 gggtctgtttgggaaa-ccaaaaaaagagcttttagtttttagcttatagcttataagtttgtttgacaaaaaaaagctctgtttggtaacactttttca 43225760  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||    
T  43225759 ccatgagcttatagcttattt 43225739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 208
Target Start/End: Complemental strand, 45780918 - 45780807
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||    
T  45780918 gggtctgtttggttaaccctaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctatttggtaacactttttcac 45780819  T
Q  197 catgagcttata 208  Q
    ||||||||||||    
T  45780818 catgagcttata 45780807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 55764523 - 55764641
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| ||| |||| |||| ||||||||||| |||||||||||||||||||||||||| |        |||||||||||||||||||||| ||    
T  55764523 gggtctgtttggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctcgtttca-aaaaaaagctctgtttggtaacactttttgac 55764621  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  55764622 catgagcttatagcttattt 55764641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 55828967 - 55829086
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||| || ||| |||| |||| ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| ||    
T  55828967 gggtctgttcggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgac 55829066  T
Q  197 catgagcttatagcttattt 216  Q
    |||||||||||| |||||||    
T  55829067 catgagcttataacttattt 55829086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 31678969 - 31679051
Alignment:
Q  134 ttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  31678969 ttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 31679051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 22892513 - 22892610
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| ||||||||||||||||||||||    
T  22892513 aaaagagcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttattt 22892610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 22944177 - 22944274
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| ||||||||||||||||||||||    
T  22944177 aaaagagcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttattt 22944274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 23868016 - 23867931
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||| ||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  23868016 agcttttagcttatagcttataagctcttttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 23867931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 25199455 - 25199366
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttata 208  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  25199455 aaaagagcttttagcttttagcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttata 25199366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 33005275 - 33005190
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||||||||    
T  33005275 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttattt 33005190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 9043791 - 9043672
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttttt-ca 195  Q
    ||||||||||||||||  ||| |||| |||||||||||||||||||||||||||||||||||||||||       | | |||||||||||||||||| ||    
T  9043791 gggtctgtttgggaaactcaa-aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttatgtttggtaacactttttcca 9043693  T
Q  196 ccatgagcttatagcttattt 216  Q
    ||||||||||||| |||||||    
T  9043692 ccatgagcttataacttattt 9043672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 214
Target Start/End: Complemental strand, 36008152 - 36008069
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttat 214  Q
    ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  36008152 agcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttat 36008069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 29413528 - 29413613
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||| ||||||||||||||    
T  29413528 agcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgaacttatagcttattt 29413613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 35822458 - 35822361
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||        |||||||||||||||||||||||||||||||||| | |||||||    
T  35822458 aaaagagcttttagcttttagcttataacttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttacaacttattt 35822361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 53273103 - 53273200
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       | ||| |||||||||||||||||||||||| |||||| |||||||    
T  53273103 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctatttggtaacactttttcaccatgaacttataacttattt 53273200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 35581109 - 35581007
Alignment:
Q  114 ccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagctta 213  Q
    |||| |||| |||||||| |||||||||||||||||||||| |||||| ||       |||||||||||||||||||||| ||||||||||||||| |||    
T  35581109 ccaaaaaaagagcttttaacttttagcttatagcttataagttcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagttta 35581010  T
Q  214 ttt 216  Q
    |||    
T  35581009 ttt 35581007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 25440631 - 25440546
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||| ||||||||||||||||||||        | |||||||||||||||||||||||||||||||||||||||||||    
T  25440631 agcttttagcttttagcttataagctcgtttgataaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttattt 25440546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 35468012 - 35468097
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||| |||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  35468012 agcttttaacttatagcttataagctcgtttgacaaaaaaaaatctgtttggtaacactttttcaccatgagcttatagcttattt 35468097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 29656843 - 29656755
Alignment:
Q  128 tttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||| |||||||||||||||||||||||||||||       | |||||||| |||||||||||| |||||||||||||||||||||    
T  29656843 tttagctcttagcttatagcttataagctcgtttgacagaaaaagttctgtttgttaacactttttcgccatgagcttatagcttattt 29656755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 37970258 - 37970376
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaat-agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttca 195  Q
    |||||||||||| ||| |||| ||||| ||||||||||| ||||||||||||||||||| |||||| ||        ||||||||||||||||||||| |    
T  37970258 gggtctgtttggtaaa-ccaaaaaaatgagcttttagctcttagcttatagcttataagttcgtttcacaaaaaaa-ctctgtttggtaacactttttga 37970355  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||    
T  37970356 ccatgagcttatagcttattt 37970376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 3009708 - 3009793
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||| ||||||||||       |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  3009708 agcttttagcttatagcttataaactcgtttgacaaaaaaagctctgtttggtaacatttttttaccttgagcttatagcttattt 3009793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 4355739 - 4355654
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||  |||||||||       | |||||||||||| ||||||||||||||||||||||||||||||    
T  4355739 agcttttagcttatagcttataaattcgtttgacaaaaaaagttctgtttggtaatactttttcaccatgagcttatagcttattt 4355654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 4939532 - 4939448
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||| |||||||||||||||||       | |||||||||||||||||||| ||||||||||||||||||||||    
T  4939532 agcttttagcttatagtttataagctcgtttgacaaaaaaagttctgtttggtaacacttttt-accatgagcttatagcttattt 4939448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 21369890 - 21369962
Alignment:
Q  144 tagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||       |||||||||||||| ||||||||||||||||||||||||||||||    
T  21369890 tagcttataagctcgtttgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttattt 21369962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 37831924 - 37832004
Alignment:
Q  136 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||| |||||||| |||||||||||||    
T  37831924 ttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacacttttttaccatgagtttatagcttattt 37832004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 55856678 - 55856589
Alignment:
Q  124 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||| |||||||||||||||||||||| | ||||||        |||||||||||||||||||||| ||||||||||||||||||||||    
T  55856678 agcttttaacttttagcttatagcttataagtttgtttga---taaaagctctgtttggtaacacttttttaccatgagcttatagcttattt 55856589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 33114979 - 33115057
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| |||||||||||||||||||||       |||||||||||||||||||||| ||| ||||||||||||||||||    
T  33114979 agcttttagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccgtgagcttatagcttattt 33115057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 9032101 - 9032057
Alignment:
Q  172 gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9032101 gctctgtttggtaacactttttcaccatgagcttatagcttattt 9032057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 15635900 - 15636024
Alignment:
Q  92 atatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttt 191  Q
    ||||| ||| ||||||| || ||| | |||| |||||||| || |||||||||||||||||| || ||||||        ||| ||||||||||||||||    
T  15635900 atatcaggtatgtttggtaacacccaaaaaagagcttttacctcttagcttatagcttataaacttgtttgataaaaaaagctttgtttggtaacacttt 15635999  T
Q  192 ttcaccatgagcttatagcttattt 216  Q
    ||||| ||||| |||||||||||||    
T  15636000 ttcactatgagtttatagcttattt 15636024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 98 - 214
Target Start/End: Original strand, 44442046 - 44442162
Alignment:
Q  98 ggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcacc 197  Q
    |||||||||| ||||  | | |||| |||||||| |||||||||||||  ||||||| |||||||||         ||||||||||||||||||||||||    
T  44442046 ggtctgtttgagaaactccaaaaaagagcttttaacttttagcttataatttataagttcgtttgacaaaaaaaattctgtttggtaacactttttcacc 44442145  T
Q  198 atgagcttatagcttat 214  Q
    |||||||||| ||||||    
T  44442146 atgagcttattgcttat 44442162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 56270231 - 56270153
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||| ||        ||||||||||||||| ||||| ||||||||||||||||||||||    
T  56270231 agcttatagcttataagctcgtttcacaaaaaaaactctgtttggtaacattttttgaccatgagcttatagcttattt 56270153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 17715579 - 17715658
Alignment:
Q  129 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttata 208  Q
    ||||||| ||||||||||||||||||||||||||||       ||||||||||||||   |||||||||| |||||||||    
T  17715579 ttagcttatagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaatggtttttcaccacgagcttata 17715658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 23162641 - 23162683
Alignment:
Q  174 tctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  23162641 tctgtttggtaacactttttccccatgagcttatagcttattt 23162683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 26826525 - 26826603
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||| | |||||||        |||||||||||||||||||||||| ||||||||||| |||||||    
T  26826525 agcttatagcttataagtttgtttgacaaaaaaaactctgtttggtaacactttttcacgatgagcttataacttattt 26826603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 51011225 - 51011127
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttga-cnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||| ||||||||| |||||||||||||||||         | ||| ||||| |||||||||||||||| ||||||||||||||||    
T  51011225 aaaagagcttttagcttctagcttataacttataagctcgtttgataaaaaaaagttctatttggcaacactttttcaccataagcttatagcttattt 51011127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 4391855 - 4391770
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||| ||||||||||||||||| ||||       ||||||||||||||| |||||| || | |||||||||||||||||    
T  4391855 agcttatagctgatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgcttttttacaacgagcttatagcttattt 4391770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 5465516 - 5465472
Alignment:
Q  172 gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||    
T  5465516 gctctgtttggtaatacttttttaccatgagcttatagcttattt 5465472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 31338661 - 31338562
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttttt--caccatgagcttatagcttattt 216  Q
    |||| ||||| ||||| ||| || |||||||||||| |||||||||       ||||||||| |||||| |||||  |||||||||||||||||||||||    
T  31338661 aaaagagcttatagctcttaactgatagcttataagttcgtttgacaaaaaaagctctgtttagtaacattttttttcaccatgagcttatagcttattt 31338562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 35842696 - 35842657
Alignment:
Q  177 gtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  35842696 gtttggtaacactttttcaccatgagcttatagattattt 35842657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 55358443 - 55358400
Alignment:
Q  173 ctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  55358443 ctctgtttgataacactttttcaccatgagcttataacttattt 55358400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 11050320 - 11050399
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||| ||||        ||||||||||||||  |||||||||||||| ||||||||||||||    
T  11050320 agcttatagcttataagctcgtctgacaaaaaaaagctctgtttggtaatgctttttcaccatgaacttatagcttattt 11050399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 30366250 - 30366208
Alignment:
Q  174 tctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  30366250 tctgtttggtaacactttttcatcatgagcttatatcttattt 30366208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 19169209 - 19169165
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttga 163  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||    
T  19169209 aaaagagcttttagctcttaacttatagcttataagctcgtttga 19169165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 23113618 - 23113538
Alignment:
Q  136 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||| ||||||||||||||||         || || ||||||| |||||||| |||||||||||||||||||||    
T  23113618 ttagcttatagtttataagctcgtttgataaaaaaaactttgattggtaatactttttcgccatgagcttatagcttattt 23113538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 25235135 - 25235227
Alignment:
Q  124 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||| || ||||| |||||||||||| |||| ||||       ||||||||||||||| |||||| || | |||||||||||||||||    
T  25235135 agcttatagtttatagctgatagcttataagttcgtctgacaaaaaaagctctgtttggtaacgcttttttacaacgagcttatagcttattt 25235227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 45520101 - 45520135
Alignment:
Q  127 ttttagcttttagcttatagcttataagctcgttt 161  Q
    |||||||| ||||||||||||||||||||||||||    
T  45520101 ttttagctcttagcttatagcttataagctcgttt 45520135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 44525659 - 44525696
Alignment:
Q  179 ttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  44525659 ttggtaacactttttcactatgagtttatagcttattt 44525696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 31452134 - 31452015
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  31452134 gggtctgtttgggaaaacaaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 31452035  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  31452034 catgagcttatagcttattt 31452015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 2442391 - 2442510
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||   || |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  2442391 gggtctgtttgggaaactaaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 2442490  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  2442491 catgagcttatagcttattt 2442510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 34903926 - 34904043
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||  | | |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  34903926 gggtctgtttgggaaactccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 34904025  T
Q  197 catgagcttatagcttat 214  Q
    ||||||||||||||||||    
T  34904026 catgagcttatagcttat 34904043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 31100192 - 31100076
Alignment:
Q  100 tctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccat 199  Q
    ||||||||| ||| |||| | || |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  31100192 tctgtttggtaaacccaaaataagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccat 31100093  T
Q  200 gagcttatagcttattt 216  Q
    |||||||||||||||||    
T  31100092 gagcttatagcttattt 31100076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 30811329 - 30811210
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| || |||||||||||||||||||||||||||| |||||||||       |||||||||||||| ||||||||||    
T  30811329 gggtctgtttgggaaacccaaaaaaagagtttttagcttttagcttatagcttataagttcgtttgacaaaaaaagctctgtttggtaatactttttcac 30811230  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  30811229 catgagcttatagcttattt 30811210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 34233078 - 34232976
Alignment:
Q  114 ccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagctta 213  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  34233078 ccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagctta 34232979  T
Q  214 ttt 216  Q
    |||    
T  34232978 ttt 34232976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 20804960 - 20805075
Alignment:
Q  100 tctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccat 199  Q
    ||||||||||||| |||| |||| ||||||||| |||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||    
T  20804960 tctgtttgggaaa-ccaaaaaaagagcttttagtttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccat 20805058  T
Q  200 gagcttatagcttattt 216  Q
    |||||||||||||||||    
T  20805059 gagcttatagcttattt 20805075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 12297331 - 12297450
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  12297331 gggtctgtttggttaaccccaaaaaagagcttttaccttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 12297430  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  12297431 catgagcttatagcttattt 12297450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 32731747 - 32731844
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||    
T  32731747 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttattt 32731844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 1806494 - 1806376
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || |||| |||| |||||||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  1806494 gggtctgtttggttaacccaa-aaaagagcttttagcttatagcttatagcttataagctcgtttgactaaaaaatctctgtttggtaacactttttcac 1806396  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  1806395 catgagcttatagcttattt 1806376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 10856133 - 10856218
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  10856133 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 10856218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 29415091 - 29414974
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| || ||| | |||| || || ||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  29415091 gggtctgtttggtaacacctaaaaaagagtttatagctcttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 29414992  T
Q  197 catgagcttatagcttat 214  Q
    ||||||||||||||||||    
T  29414991 catgagcttatagcttat 29414974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 14227716 - 14227597
Alignment:
Q  96 cgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttca 195  Q
    |||||||||||||  || || | |||| ||||||||||||||||||||||||||||||||||||||||        ||| ||||||||||||||||||||    
T  14227716 cgggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttga-taaaaaagctttgtttggtaacactttttca 14227618  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||    
T  14227617 ccatgagcttatagcttattt 14227597  T

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Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 558360 - 558446
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  558360 agcttttagcttatagcttataagctcgtttgacaaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 558446  T

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Target: chr6; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 33453734 - 33453821
Alignment:
Q  129 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||| |||||||||| ||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  33453734 ttagcttatagcttatagtttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 33453821  T

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Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 12432760 - 12432682
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  12432760 agcttatagcttataagctcgtttgacaaaaaaatctctgtttggtaacactttttcaccatgagcttatagcttattt 12432682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 34685161 - 34685077
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||| ||||||||||||||||||||    
T  34685161 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacattttca-catgagcttatagcttattt 34685077  T

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Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 7317788 - 7317672
Alignment:
Q  100 tctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccat 199  Q
    ||||||||| |||  ||| |||| ||||||||||| ||| ||||||||||||||| |||||| ||       |||||||||||||||| ||||| |||||    
T  7317788 tctgtttggtaaactcaaaaaaagagcttttagctcttaacttatagcttataagttcgtttcacagaaaaagctctgtttggtaacattttttgaccat 7317689  T
Q  200 gagcttatagcttattt 216  Q
    |||||||||||||||||    
T  7317688 gagcttatagcttattt 7317672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 3108153 - 3108071
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagctta 213  Q
    ||||| ||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||| ||||    
T  3108153 agcttatagcttatagcttataagctcgtttgacaaaaaaagctctatttggtaacactttttcaccatgagcttataactta 3108071  T

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Target: chr6; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 33540865 - 33540787
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||||||||||| ||||||||||||||||    
T  33540865 agcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccataagcttatagcttattt 33540787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 218
Target Start/End: Complemental strand, 29823176 - 29823095
Alignment:
Q  137 tagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattttg 218  Q
    ||||||||||||||||||||||||||||       |||||||||| ||||| |||||||||||||||| |||||||||||||    
T  29823176 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttgataacattttttcaccatgagctaatagcttattttg 29823095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 34439683 - 34439768
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||||||||||||||||||||| ||||        ||||||||||||| ||||||||||||||||||||||||||||||    
T  34439683 agcttatagcttatagcttataagctcgtctgacaaaaaaaactctgtttggtaatactttttcaccatgagcttatagcttattt 34439768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 6709869 - 6709757
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| ||||||||      ||||||||||||||||| |||||||||         |||||||||||||||||||||||    
T  6709869 gggtctgtttgggaaa-ccaaaaaaagagctttta------agcttatagcttataagttcgtttgacaaaaaaaattctgtttggtaacactttttcac 6709777  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  6709776 catgagcttatagcttattt 6709757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 3636798 - 3636702
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||| ||| ||||||||||||||||| |||||||         |||||||||||||||||||||||||| ||||||||||||||||    
T  3636798 aaaagagcttttagctcttaacttatagcttataagcttgtttgacaaaaaaat-tctgtttggtaacactttttcaccataagcttatagcttattt 3636702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 11015590 - 11015675
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||||||||||||||||||||| ||||        ||||||||||||| |||||||||||||||||||||| |||||||    
T  11015590 agcttatagcttatagcttataagctcgtctgacaaaaaaaactctgtttggtaatactttttcaccatgagcttataacttattt 11015675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 28076423 - 28076508
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||||||||||||||| ||||| ||||       |||||||||||||| ||||||| ||||||||||||||||||||||    
T  28076423 agcttatagcttatagcttataaactcgtctgacaaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttattt 28076508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 5681527 - 5681605
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||| |||||||| || ||||||       ||||||||||| |||||||||||||||||||||||||||||||||    
T  5681527 agcttataacttataagttcttttgacaaaaaaagctctgtttggcaacactttttcaccatgagcttatagcttattt 5681605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 5943035 - 5943077
Alignment:
Q  174 tctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  5943035 tctgtttgataacactttttcaccatgagcttatagcttattt 5943077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 5301741 - 5301663
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||| ||||       | ||||||||||||   ||||||||||||||||||||||||||||    
T  5301741 agcttatagcttataagctcgtatgacaaaaaaagttctgtttggtaatgttttttcaccatgagcttatagcttattt 5301663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 31049379 - 31049419
Alignment:
Q  176 tgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  31049379 tgtttggtaatactttttcaccatgagcttatagcttattt 31049419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 2970722 - 2970760
Alignment:
Q  178 tttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  2970722 tttggtaacacttttttaccatgagtttatagcttattt 2970760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 7292688 - 7292610
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||  ||        |||||||||| |||| |||||| || |||||||||||||||||||    
T  7292688 agcttatagcttataagctcgtcggataaaaaaagctctgtttgataacgcttttttacaatgagcttatagcttattt 7292610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 23648201 - 23648279
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||| |||||||       ||||||||||||||  || | | |||| |||||||||||||||||    
T  23648201 agcttatagcttataagcttgtttgacaaaaaaagctctgtttggtaatgctctcttaccacgagcttatagcttattt 23648279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 6104801 - 6104732
Alignment:
Q  147 cttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||       ||||||||||||||   | |||||||| |||||||||||||||||    
T  6104801 cttataagctcgtttgaccaaaaaagctctgtttggtaatggtctttcaccacgagcttatagcttattt 6104732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 5e-40; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 12713273 - 12713397
Alignment:
Q  92 atatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttt 191  Q
    |||| |||||||||||||||| || | |||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  12713273 atatagggtctgtttgggaaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttt 12713372  T
Q  192 ttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||    
T  12713373 ttcaccatgagcttatagcttattt 12713397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 12774537 - 12774661
Alignment:
Q  92 atatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttt 191  Q
    |||| |||||||||||||||| || | |||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  12774537 atatagggtctgtttgggaaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttt 12774636  T
Q  192 ttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||    
T  12774637 ttcaccatgagcttatagcttattt 12774661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 2236687 - 2236568
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  2236687 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcac 2236588  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  2236587 catgagcttatagcttattt 2236568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 30412783 - 30412664
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  30412783 gggtctgtttgggaaacccaaaaaaaaagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 30412684  T
Q  197 catgagcttatagcttattt 216  Q
    |||||| |||||||||||||    
T  30412683 catgagtttatagcttattt 30412664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 1711374 - 1711255
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  1711374 gggtctgtttgggaaacccaaaaaaagagcttttagcttatagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 1711275  T
Q  197 catgagcttatagcttattt 216  Q
    |||||||||||| |||||||    
T  1711274 catgagcttataacttattt 1711255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 5591555 - 5591673
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||    
T  5591555 gggtctgtttgggaaa-ccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcac 5591653  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  5591654 catgagcttatagcttattt 5591673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 2671380 - 2671499
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||   || |||| | |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  2671380 gggtctgtttgggaaactaaaaaaaaaaacttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 2671479  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  2671480 catgagcttatagcttattt 2671499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 39744712 - 39744594
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||| ||||||||    
T  39744712 gggtctgtttgggaaa-ccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgttttgtaacattttttcac 39744614  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  39744613 catgagcttatagcttattt 39744594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 14647506 - 14647409
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  14647506 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 14647409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 24793964 - 24794057
Alignment:
Q  123 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  24793964 tagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 24794057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 36685782 - 36685901
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| ||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  36685782 gggtctgtttggttaaccccaaaaaagagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 36685881  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  36685882 catgagcttatagcttattt 36685901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 39275390 - 39275508
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| | || |||||||||||||||||||| |||||||||||||||||||||||||       | |||||||||||||||||||| ||    
T  39275390 gggtctgtttgggaaa-ctaaaaaaatagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacacttttttac 39275488  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  39275489 catgagcttatagcttattt 39275508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 8024138 - 8024036
Alignment:
Q  114 ccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagctta 213  Q
    |||| |||| ||||||||||||||||||||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  8024138 ccaaaaaaagagcttttagcttttagcttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagctta 8024039  T
Q  214 ttt 216  Q
    |||    
T  8024038 ttt 8024036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 13228643 - 13228525
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||  | | |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||| ||    
T  13228643 gggtctgtttgggaaactccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac-aaaaaagctctgtttggtaacacttttttac 13228545  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  13228544 catgagcttatagcttattt 13228525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 30299681 - 30299783
Alignment:
Q  114 ccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagctta 213  Q
    |||| |||| || ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  30299681 ccaaaaaaagagtttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagctta 30299780  T
Q  214 ttt 216  Q
    |||    
T  30299781 ttt 30299783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 4221622 - 4221525
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||    
T  4221622 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttattt 4221525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 19956456 - 19956359
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||    
T  19956456 aaaagagcttttagcttttagcttatagcttataagctcgtttaacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 19956359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 1174750 - 1174869
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| ||| |||| |||| ||||||||||| |||||||||||||||||||||||||| ||       | |||||||||||||||||||| ||    
T  1174750 gggtctgtttggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagttctgtttggtaacactttttgac 1174849  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  1174850 catgagcttatagcttattt 1174869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 32382815 - 32382934
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| ||||||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||||||    
T  32382815 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgataaaaaaagttctgtttggtaacactttttcac 32382914  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  32382915 catgagcttatagcttattt 32382934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 29392279 - 29392159
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatag--cttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttc 194  Q
    |||||||||||||||||| || |||| ||  ||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||     
T  29392279 gggtctgtttgggaaaacaaaaaaaaaagagcttttagcttttagcttatagtttataagctcgtttgac-aaaaaagctctgtttggtaacactttttt 29392181  T
Q  195 accatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||    
T  29392180 accatgagcttatagcttattt 29392159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 10697235 - 10697354
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||| ||||||| ||| |||| |||| ||||||||||| |||||||||||||||||||||| ||| ||       |||||||||||||||||||||| ||    
T  10697235 gggtttgtttggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctcatttcacaaaaaaagctctgtttggtaacactttttgac 10697334  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  10697335 catgagcttatagcttattt 10697354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 30774363 - 30774244
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||| ||||| ||| |||| |||| ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| ||    
T  30774363 gggtctctttggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgac 30774264  T
Q  197 catgagcttatagcttattt 216  Q
    ||| ||||||||||||||||    
T  30774263 cataagcttatagcttattt 30774244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 9587360 - 9587238
Alignment:
Q  95 tcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgac-nnnnnnngctctgtttggtaacacttttt 193  Q
    ||||||||||||||||||   || |||| |||||||||||| ||||||||||||||||||||||||||||        | |||||||| |||||||||||    
T  9587360 tcgggtctgtttgggaaattaaaaaaaagagcttttagcttatagcttatagcttataagctcgtttgacaaaaaaaagttctgtttgataacacttttt 9587261  T
Q  194 caccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||    
T  9587260 caccatgagcttatagcttattt 9587238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 5998031 - 5997946
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||||||||||||    
T  5998031 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccgtgagcttatagcttattt 5997946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 32381823 - 32381726
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||        || |||||||||||||||||||||||||||||||||||||||||    
T  32381823 aaaagagcttttagcttttagcttatagcttataagcttgtttgacaaaaaaaactatgtttggtaacactttttcaccatgagcttatagcttattt 32381726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 6604081 - 6603962
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||| | ||||||| || | |||| || |||||||||||||||||||||||||||| |||||||||       |||||||||||||||| ||||||||    
T  6604081 gggtctatgtgggaaaccccaaaaaagagtttttagcttttagcttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacattttttcac 6603982  T
Q  197 catgagcttatagcttattt 216  Q
    | ||||||||||||||||||    
T  6603981 cgtgagcttatagcttattt 6603962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 19525715 - 19525834
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| ||||||||||||||| ||||||| |||||| ||||||||||       ||||||||||||||||| |||||||    
T  19525715 gggtctgtttggttaaccctaaaaaagagcttttagcttttaccttatagtttataaactcgtttgacaaaaaaagctctgtttggtaacaccttttcac 19525814  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  19525815 catgagcttatagcttattt 19525834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 26699245 - 26699158
Alignment:
Q  129 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||| |||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  26699245 ttagcttatagcttataggttataagctcgtttgacaaataaagctctgtttggtaacactttttcaccatgagcttatagcttattt 26699158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 26968978 - 26968891
Alignment:
Q  129 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||| |||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  26968978 ttagcttatagcttataggttataagctcgtttgacaaataaagctctgtttggtaacactttttcaccatgagcttatagcttattt 26968891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 43402451 - 43402529
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  43402451 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 43402529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 9160829 - 9160744
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||| || ||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  9160829 agcttttagcttttaacttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 9160744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 27130333 - 27130418
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  27130333 agcttttagcttatagcttataagctcttttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttattt 27130418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 35235864 - 35235779
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  35235864 agcttttagcttttagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttattt 35235779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 39246973 - 39246889
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||||||||||||||||||    
T  39246973 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacac-ttttcaccatgagcttatagcttattt 39246889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 12363764 - 12363664
Alignment:
Q  117 agaaaatagcttttagcttttagcttatagcttataagctcgtttgac-nnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatt 215  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||||||||||||| ||||||    
T  12363764 agaaaagagcttttaacttttagcttatagcttataagctcgtttgacaaaaaaaagttctgtttggtaacactttttcaccatgagcttataacttatt 12363665  T
Q  216 t 216  Q
    |    
T  12363664 t 12363664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 217
Target Start/End: Complemental strand, 25872379 - 25872259
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| || ||| | |||| |||||||||||  ||||||||||||||||||||| ||||||       |||||||||||||||||||||||||    
T  25872379 gggtctgtttggtaacacccaaaaaagagcttttagctcgtagcttatagcttataagctcatttgacaaaaaaagctctgtttggtaacactttttcac 25872280  T
Q  197 catgagcttatagcttatttt 217  Q
    ||||| ||||||  |||||||    
T  25872279 catgaacttataatttatttt 25872259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 31169159 - 31169039
Alignment:
Q  96 cgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttca 195  Q
    |||||||||||||||||   || |||| || ||||||||||||| |||||| ||||||| |||||||||        ||||||||| |||||||||||||    
T  31169159 cgggtctgtttgggaaactaaaaaaaagagtttttagcttttagtttatagtttataagttcgtttgacaaaaaaaactctgtttgataacactttttca 31169060  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||    
T  31169059 ccatgagcttatagcttattt 31169039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 13157057 - 13156938
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||  ||| || | |||| ||||||||||||||| ||||||||||||||| | |||||||       |||||||||||||||||||||||||    
T  13157057 gggtctgtttgaaaaaccccaaaaaagagcttttagcttttaccttatagcttataagtttgtttgacaaaaaaagctctgtttggtaacactttttcac 13156958  T
Q  197 catgagcttatagcttattt 216  Q
    ||| | ||||||||||||||    
T  13156957 cattaacttatagcttattt 13156938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 15443422 - 15443541
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||| ||||||| |||| |||| || ||||| ||||||| |||||||||||||| |||||||||       | | || ||||||||||||||||||    
T  15443422 gggtctgtctgggaaacccaaaaaaagagtttttaacttttagtttatagcttataagttcgtttgacaagtttagttttggttggtaacactttttcac 15443521  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  15443522 catgagcttatagcttattt 15443541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 35236838 - 35236719
Alignment:
Q  98 ggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcac 196  Q
    ||||||||||| ||| | || |||| ||||||||||| |||||||||||||||||||||||||| |         |||||||||||||||||||||| ||    
T  35236838 ggtctgtttggtaaaccaaaaaaaagagcttttagctcttagcttatagcttataagctcgtttcataaaaaaaagctctgtttggtaacactttttgac 35236739  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  35236738 catgagcttatagcttattt 35236719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 11664040 - 11663943
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| ||||| || |||||||||||||    
T  11664040 aaaagagcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccataagtttatagcttattt 11663943  T

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Target: chr5; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 3037597 - 3037477
Alignment:
Q  96 cgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttca 195  Q
    |||||||||||||||||   || |||| ||||||||||||||| ||||||||||||||||| ||||||        | | |||||||||||||||||| |    
T  3037597 cgggtctgtttgggaaactaaaaaaaagagcttttagcttttaacttatagcttataagcttgtttgataaaaaaaggtatgtttggtaacactttttta 3037498  T
Q  196 ccatgagcttatagcttattt 216  Q
    ||||||| |||||||||||||    
T  3037497 ccatgagtttatagcttattt 3037477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 6893527 - 6893431
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||| |||||| ||||||||||| |||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||||||||    
T  6893527 aaaagagctgttagctcttagcttatagtttataagctcgtttgacaaaaaa-gctctgtttggtaacacttttttaccatgagcttatagcttattt 6893431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 36028121 - 36028042
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttt 217  Q
    ||||||||||||||||||| |||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  36028121 agcttatagcttataagcttgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttt 36028042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 5382082 - 5381996
Alignment:
Q  129 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||||||||| |||||||    
T  5382082 ttagcttatagcttatagcttataagctcgtttgacaaaaaa-gctctgtttggtaacactttttcaccacgagcttataacttattt 5381996  T

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Target: chr5; HSP #46
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 5521305 - 5521383
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  5521305 agcttatagcttataagctcgtttgacaaaaaaaattctgtttggtaacactttttcaccatgagcttatagcttattt 5521383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 15530442 - 15530520
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||        || |||||||||||||||||||||||||||||||||||||||||    
T  15530442 agcttatagcttataagctcgtttgacaaaaaaaactatgtttggtaacactttttcaccatgagcttatagcttattt 15530520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 3670266 - 3670363
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||| |||||||||||||||| ||||||||| ||        ||||||||||||||||||||| |||||| |||||||||||||||    
T  3670266 aaaagagcttttagctcttagcttatagcttatgagctcgtttcacaaaaaaaactctgtttggtaacactttttgaccatgcgcttatagcttattt 3670363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 11063047 - 11062959
Alignment:
Q  129 ttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||| |||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||||||||| |||||||    
T  11063047 ttagcttatagcttatagcttataagctcgtttggcaaaaaaaagctctgtttggtaacactttttcaccatgagcttataacttattt 11062959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 35639907 - 35640025
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||| |||||||||| |||| |||| ||||||||| ||||| ||||||  ||||||||||||||||        |||||||||| ||| ||||||||||    
T  35639907 gggtcagtttgggaaa-ccaaaaaaagagcttttagtttttaacttataatttataagctcgtttgataaaaaaagctctgtttgataatactttttcac 35640005  T
Q  197 catgagcttatagcttattt 216  Q
    |||||| |||||||||||||    
T  35640006 catgagtttatagcttattt 35640025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 648538 - 648616
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||| ||||       ||||||||||||||  |||||||||||||||||||||||||||||    
T  648538 agcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaatgctttttcaccatgagcttatagcttattt 648616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 2178802 - 2178845
Alignment:
Q  173 ctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2178802 ctctgtttggtaacactttttcaccatgagcttatagcttattt 2178845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 4379300 - 4379343
Alignment:
Q  173 ctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  4379300 ctctgtttggtaacactttttcaccatgagcttatagcttattt 4379343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 7651682 - 7651725
Alignment:
Q  173 ctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  7651682 ctctgtttggtaacactttttcaccatgagcttatagcttattt 7651725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 3669529 - 3669626
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||| ||||||||||| ||||||| ||||||||        |||||||||||||||||||||| ||||| | ||| ||||||||||    
T  3669529 aaaagagcttttagctcttagcttatagtttataagttcgtttgataaaaaaagctctgtttggtaacacttttttaccataaacttgtagcttattt 3669626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 22977301 - 22977257
Alignment:
Q  172 gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  22977301 gctctgtttggtaacaccttttcaccatgagcttatagcttattt 22977257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 19347705 - 19347791
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| |||||| ||||||||||||||||||||         |||||||||||||| ||||||| ||||||||||||||||||||||    
T  19347705 agcttatagcttttagcttataagctcgtttgataaaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttattt 19347791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 11100899 - 11100814
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||||||||||||||||||||| ||||       |||||||||||||||   |||| || | |||||||||||||||||    
T  11100899 agcttatagcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgtctttttacaacgagcttatagcttattt 11100814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 9627246 - 9627206
Alignment:
Q  176 tgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||| ||||||||||| || |||||||||||||||||||    
T  9627246 tgtttgataacacttttttacaatgagcttatagcttattt 9627206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 25570341 - 25570465
Alignment:
Q  92 atatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttt 191  Q
    |||||||||||||||||||||   || |||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  25570341 atatcgggtctgtttgggaaactaaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttt 25570440  T
Q  192 ttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||    
T  25570441 ttcaccatgagcttatagcttattt 25570465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 37528908 - 37528789
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  37528908 gggtctgtttgggaaacccaaaaaaaaagcttttaacttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 37528809  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  37528808 catgagcttatagcttattt 37528789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 35499563 - 35499687
Alignment:
Q  91 catatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactt 190  Q
    ||||| |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  35499563 catatagggtctgtttgggaaacccaaaaaaa-agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaatctctgtttggtaacactt 35499661  T
Q  191 tttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||    
T  35499662 tttcaccatgagcttatagcttattt 35499687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 8872840 - 8872959
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       ||| |||||||||| ||||||||||    
T  8872840 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctatgtttggtaatactttttcac 8872939  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  8872940 catgagcttatagcttattt 8872959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 37088251 - 37088370
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||| ||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||||||||    
T  37088251 gggtctttttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaatactttttcac 37088350  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  37088351 catgagcttatagcttattt 37088370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 45345192 - 45345074
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| || ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  45345192 gggtctgtttgggaaa-ccaaaaaaagagtttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 45345094  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  45345093 catgagcttatagcttattt 45345074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 44748975 - 44748852
Alignment:
Q  92 atatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttt 191  Q
    |||| |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||| || |||||||       ||||||||||||||||||||    
T  44748975 atatagggtctgtttgggaaa-ccaaaaaaagagcttttagcttttagcttatagcttataaacttgtttgacaaaaaaagctctgtttggtaacacttt 44748877  T
Q  192 ttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||    
T  44748876 ttcaccatgagcttatagcttattt 44748852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 26540927 - 26541046
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  26540927 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 26541026  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  26541027 catgagcttatagcttattt 26541046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 28677075 - 28676956
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||| ||||||||||| || | |||| ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||    
T  28677075 gggtatgtttgggaaaccctaaaaaagagcttttagcttttagcttatagcttataagctcgtttgaaaaaaaaagctctgtttggtaacactttttcac 28676976  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  28676975 catgagcttatagcttattt 28676956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 44545198 - 44545316
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||    
T  44545198 gggtctgtttgggaaa-ccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcac 44545296  T
Q  197 catgagcttatagcttattt 216  Q
    ||||| ||||||||||||||    
T  44545297 catgaacttatagcttattt 44545316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 46248148 - 46248030
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||| ||||||||||| |||| |||| ||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  46248148 gggtttgtttgggaaacccaa-aaaagagcttttagtttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 46248050  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  46248049 catgagcttatagcttattt 46248030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 16127302 - 16127205
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  16127302 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 16127205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 29081444 - 29081347
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  29081444 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 29081347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 38185759 - 38185856
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  38185759 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 38185856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 40563522 - 40563429
Alignment:
Q  123 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  40563522 tagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 40563429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 40480179 - 40480086
Alignment:
Q  124 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttt 217  Q
    |||||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||||||    
T  40480179 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttt 40480086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 44845621 - 44845710
Alignment:
Q  127 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  44845621 ttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 44845710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 2580112 - 2579993
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||||||||||| |||||||||||||| |||||||||       |||||||||||||||||||||||||    
T  2580112 gggtctgtttggttaaccctaaaaaagagcttttagcttttagtttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcac 2580013  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  2580012 catgagcttatagcttattt 2579993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 52857863 - 52857982
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| ||| |||| |||| ||||||||||| |||| ||||||||||||||||||||| ||       |||||||||||||||||||||| ||    
T  52857863 gggtctgtttggtaaacccaaaaaaagagcttttagctcttagtttatagcttataagctcgttttacaaaaaaagctctgtttggtaacactttttgac 52857962  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  52857963 catgagcttatagcttattt 52857982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 24536738 - 24536620
Alignment:
Q  98 ggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcacc 197  Q
    ||||||||| |||||  | | |||| ||||||||||| |||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||    
T  24536738 ggtctgtttcggaaactccaaaaaagagcttttagctcttagcttagagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcacc 24536639  T
Q  198 atgagcttatagcttattt 216  Q
    |||||||||||||||||||    
T  24536638 atgagcttatagcttattt 24536620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 38892149 - 38892052
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||| ||||||||||||||||||||||||||||    
T  38892149 aaaagagcttttagcttttagcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttattt 38892052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 39469914 - 39469999
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  39469914 agcttttagcttatagcttataagctcgtttgaccaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 39469999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 19948503 - 19948384
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||||||| |||||||||| |||||||||||||||||       |||||||||||||||||||||| ||    
T  19948503 gggtctgtttggttaaccccaaaaaagagcttttagcttctagcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttac 19948404  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  19948403 catgagcttatagcttattt 19948384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 29718385 - 29718267
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| | || |||| ||||||||| |||||| ||||||||||||||||||||||||       ||||||||||||||||| ||||||     
T  29718385 gggtctgtttgggaaaccaaaaaaaaaagcttttagtttttagtttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacac-ttttcat 29718287  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  29718286 catgagcttatagcttattt 29718267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 41785776 - 41785895
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| ||||||||||||||| |||||||||||||||||||||||||       |||||||||| ||| ||||||||||    
T  41785776 gggtctgtttggttaaccccaaaaaagagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttgataatactttttcac 41785875  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  41785876 catgagcttatagcttattt 41785895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 52166275 - 52166156
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| ||| |||| |||| ||||||||||| |||||||||||||||||||||||||| ||        |||||||||| |||||||||| ||    
T  52166275 gggtctgtttggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctcgtttcacaaaaaaatctctgtttggcaacactttttgac 52166176  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  52166175 catgagcttatagcttattt 52166156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 54672364 - 54672246
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||   || |||| |||||||||||||||| |||||||||||||||||||||||        |||||||||| ||||||||||||||    
T  54672364 gggtctgtttgggaaactaaaaaaaagagcttttagcttttagtttatagcttataagctcgtttga-gaaaaaagctctgtttgataacactttttcac 54672266  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  54672265 catgagcttatagcttattt 54672246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 37714116 - 37714031
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  37714116 agcttttagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 37714031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 52794896 - 52794981
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||||||    
T  52794896 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttccccatgagcttatagcttattt 52794981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 55305260 - 55305175
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||    
T  55305260 agcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttattt 55305175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 4240279 - 4240364
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  4240279 agcttttagcttataacttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 4240364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 21707140 - 21707237
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||| |||||||||||||||||||||| ||       | ||||||||||||||||||||||||||||| |||||||||||||    
T  21707140 aaaagagcttttagcttttaacttatagcttataagctcgtttaacaaaaaaagttctgtttggtaacactttttcaccatgagattatagcttattt 21707237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 43525744 - 43525829
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||| ||||||       |||||||||||||||| ||||||||||||||||||||||||||||    
T  43525744 agcttttagcttatagcttataagctcatttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttattt 43525829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 53779032 - 53779117
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||| |||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||    
T  53779032 agcttttagcttttagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttattt 53779117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 24628345 - 24628265
Alignment:
Q  136 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||||||||||||||    
T  24628345 ttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttattt 24628265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 42217662 - 42217749
Alignment:
Q  129 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||| |||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||||||||    
T  42217662 ttagcttatagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttattt 42217749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 46972000 - 46972119
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| |||  ||| |||| ||||||||||| |||||||||||||||||||||||||| ||         | |||||||||||||||||| ||    
T  46972000 gggtctgtttggtaaactcaaaaaaagagcttttagctcttagcttatagcttataagctcgtttcacaaaaaaatttatgtttggtaacactttttgac 46972099  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  46972100 catgagcttatagcttattt 46972119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 47897769 - 47897672
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||| ||||||| ||||||||||||| ||| ||||||       ||||||||| |||||||||||||||||||||||||||||||||||    
T  47897769 aaaagagcttttaccttttagtttatagcttataaactcatttgacaaaaaaagctctgtttagtaacactttttcaccatgagcttatagcttattt 47897672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 49853206 - 49853109
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||| || ||| |||||||||||||||||||||||||       ||| | |||||||||||||||||||||||||||||||||||||||    
T  49853206 aaaagagcttttaactcttaccttatagcttataagctcgtttgacaaaaaaggctatctttggtaacactttttcaccatgagcttatagcttattt 49853109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 54542086 - 54542001
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       | | |||||||||||| ||||||||||||||||||||||||||||    
T  54542086 agcttttagcttatagcttataagctcgtttgacaaaaaaagttttgtttggtaacattttttcaccatgagcttatagcttattt 54542001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 30814403 - 30814316
Alignment:
Q  129 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||| ||||||||||||| ||||||||||||||       | | |||||||||||||||||||||||||||||||||||||||||    
T  30814403 ttagcttatagcttatagcttttaagctcgtttgacaaaaaaagttttgtttggtaacactttttcaccatgagcttatagcttattt 30814316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 33391870 - 33391989
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| || ||| | |||| || |||||||| ||| |||| |||||||||| |||||||||       | |||||||||||||||||||||||    
T  33391870 gggtctgtttggtaacacccaaaaaagagtttttagctcttaacttagagcttataagttcgtttgacaaaaaaagttctgtttggtaacactttttcac 33391969  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||| ||||||    
T  33391970 catgagcttatagtttattt 33391989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 50499730 - 50499848
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || |||| |||| ||||||||||||||||||||||| ||||||||||||||||        | | |||||||||||||||||||||    
T  50499730 gggtctgtttggttaacccaa-aaaagagcttttagcttttagcttatagtttataagctcgtttgataaaaaaagttttgtttggtaacactttttcac 50499828  T
Q  197 catgagcttatagcttattt 216  Q
    ||| ||||||||| ||||||    
T  50499829 cataagcttatagtttattt 50499848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 46318923 - 46318825
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||| || ||||||||||||||||||||||||||||         |||||||||| ||||||||||||||||||||||||||||||||||    
T  46318923 aaaagagcttttatctcttagcttatagcttataagctcgtttgataaaaaaaagctctgtttgataacactttttcaccatgagcttatagcttattt 46318825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 48942992 - 48943075
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||         |||||||||||||||||||| ||||||||||||||||||||||    
T  48942992 agcttttagcttatagcttataagctcgtttgacaaaaaaa--tctgtttggtaacacttttttaccatgagcttatagcttattt 48943075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 50317180 - 50317095
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||| ||||||||||||||||||||||||        | ||||||||| |||||||||||||||||||||||||||||||||    
T  50317180 agcttttaacttatagcttataagctcgtttgataaaaaaagttctgtttggcaacactttttcaccatgagcttatagcttattt 50317095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 52225286 - 52225371
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||| ||||||||||||||||||||||       | |||||||||||||||||||| ||||||||||||||||||||||    
T  52225286 agcttatagctcatagcttataagctcgtttgacaacaaaagttctgtttggtaacacttttttaccatgagcttatagcttattt 52225371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 30864395 - 30864512
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||| ||||| | || |||| |||||||| ||||||| |||||||||||||||| |||||||         |||||||||||||||||||||||    
T  30864395 gggtctgtttaggaaatcaaa-aaaagagcttttaacttttagtttatagcttataagct-gtttgacaaaaaaaattctgtttggtaacactttttcac 30864492  T
Q  197 catgagcttatagcttattt 216  Q
    ||| ||||||||||||||||    
T  30864493 cattagcttatagcttattt 30864512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 193398 - 193484
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttt 217  Q
    ||||| ||||||||||||||||||||||||||||       |||||||||||||||| ||||| || | ||||||||||||||||||    
T  193398 agcttatagcttatagcttataagctcgtttgacaaaaatagctctgtttggtaacaattttttacaacgagcttatagcttatttt 193484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 12063916 - 12063794
Alignment:
Q  94 atcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttttt 193  Q
    ||||||||||||||| |||  | | |||| ||||||||||| |||| ||||||||||||| || |||||||         ||||||||||||||||||||    
T  12063916 atcgggtctgtttggtaaactccaaaaaagagcttttagctcttagtttatagcttataaacttgtttgacaaaaaaaattctgtttggtaacacttttt 12063817  T
Q  194 caccatgagcttatagcttattt 216  Q
     ||||| ||||||||||||||||    
T  12063816 gaccataagcttatagcttattt 12063794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 39876622 - 39876700
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||| |||||||||       |||||||||| ||||||||||||| ||||||||||||||||||||    
T  39876622 agcttatagcttataagttcgtttgactaaaaaagctctgtttgataacactttttcatcatgagcttatagcttattt 39876700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 41246257 - 41246335
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||| ||||||||||       | ||| |||||||||||||||||||||||||||||||||||||||    
T  41246257 agcttatagcttataaactcgtttgacaaaaaaagttctatttggtaacactttttcaccatgagcttatagcttattt 41246335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 46627644 - 46627563
Alignment:
Q  136 ttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||        | |||||||||||| ||||||||||||||||||||||||||||||    
T  46627644 ttagcttatagcttataagctcgtttgacaaaaaaaagttctgtttggtaatactttttcaccatgagcttatagcttattt 46627563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 47173557 - 47173654
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||| ||||| ||||||||||| ||||||||||||||||        | |||||||| |||| |||||||||||||||||||||||||||||    
T  47173557 aaaagagcttatagctcttagcttataggttataagctcgtttgataaaaaaagttctgtttgataacgctttttcaccatgagcttatagcttattt 47173654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 52363004 - 52363076
Alignment:
Q  92 atatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgac 164  Q
    |||| ||||||||||||||||   || |||| ||||||||||||||||||||||||||||||||| |||||||    
T  52363004 atatagggtctgtttgggaaactaaaaaaaagagcttttagcttttagcttatagcttataagcttgtttgac 52363076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 2851831 - 2851903
Alignment:
Q  144 tagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||| |||||||||       | |||||||||||||||||||||||||||||||||||||||||||    
T  2851831 tagcttataagttcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttattt 2851903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 35100176 - 35100275
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn--gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||          | | |||||||||||||||||||||||||||||||||||||||||    
T  35100176 aaaaaagcttttagttcttagcttatagcttataagctcgtttgataaaaaaaaagttttgtttggtaacactttttcaccatgagcttatagcttattt 35100275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 51950323 - 51950427
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| || ||| | |||| || || | ||| |||||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  51950323 gggtctgtttggtaatacctaaaaaagagtttatcgctcttagcttataacttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 51950422  T
Q  197 catga 201  Q
    |||||    
T  51950423 catga 51950427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 52931241 - 52931200
Alignment:
Q  173 ctctgtttggtaacactttttcaccatgagcttatagcttat 214  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  52931241 ctctgtttggtaacactttttcaccatgagcttatagcttat 52931200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 2121869 - 2121913
Alignment:
Q  172 gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  2121869 gctctgtttgataacactttttcaccatgagcttatagcttattt 2121913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 45693552 - 45693472
Alignment:
Q  136 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||| |||||||||        || | |||||||||||||||||||||||||||||||| ||||||    
T  45693552 ttagcttatagcttataagttcgtttgacaaaaaaaactttatttggtaacactttttcaccatgagcttatagtttattt 45693472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 21603846 - 21603884
Alignment:
Q  178 tttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21603846 tttggtaacactttttcaccatgagcttatagcttattt 21603884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 24536869 - 24536807
Alignment:
Q  102 tgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgac 164  Q
    |||||||||||  | | |||| ||||||||||| |||||||||||||||||||||||||||||    
T  24536869 tgtttgggaaactccaaaaaagagcttttagctcttagcttatagcttataagctcgtttgac 24536807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 45368577 - 45368696
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| || ||| | |||  ||||| |||||| ||||| ||||||||||||||||| ||||       ||||||||||||||| |||||| ||    
T  45368577 gggtctgtttggtaacacccaaaaaggagcttatagcttatagctgatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgcttttttac 45368676  T
Q  197 catgagcttatagcttattt 216  Q
     |  ||||||||||||||||    
T  45368677 aacaagcttatagcttattt 45368696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 48378193 - 48378312
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||| ||||| || ||| | |||| |||||||| || |||||||||||||||||||||| ||||||         |||||||||||||| ||||||||    
T  48378193 gggtctctttggtaacacccaaaaaagagcttttacctcttagcttatagcttataagctcatttgacaaaaaaaaatctgtttggtaacattttttcac 48378292  T
Q  197 catgagcttatagcttattt 216  Q
    || |||  ||||||||||||    
T  48378293 cacgagtctatagcttattt 48378312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 51709055 - 51709097
Alignment:
Q  174 tctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  51709055 tctgtttggtaacactttttcaccatgagcttataacttattt 51709097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 30548790 - 30548830
Alignment:
Q  176 tgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  30548790 tgtttggtaacacttttttaccatgagcttatagcttattt 30548830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 42465190 - 42465093
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||| ||||| ||| |||||||||||||||||||||||||         | |||||||||||| ||||||  ||||||||||||||||||||    
T  42465190 aaaagagcttatagctcttaacttatagcttataagctcgtttgacaaaaaaaattatgtttggtaacattttttcggcatgagcttatagcttattt 42465093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 52788677 - 52788733
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaaca 187  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  52788677 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaaca 52788733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 28394217 - 28394172
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgac 164  Q
    |||| ||||||||||||||| |||||| ||||||||||||||||||    
T  28394217 aaaagagcttttagcttttaccttataacttataagctcgtttgac 28394172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 43740384 - 43740344
Alignment:
Q  176 tgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  43740384 tgtttggtaacagtttttcaccatgagtttatagcttattt 43740344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 44947352 - 44947267
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| |||||||||||||||||||||||||||        |||||||||||||     ||||||||| |||||||||||||||||    
T  44947352 agcttatagcttatagcttataagctcgtttgataaaaaaagctctgtttggtactgtcttttcaccacgagcttatagcttattt 44947267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 53779005 - 53779053
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttata 145  Q
    |||||||||||||||| | || |||| ||||||||||||||||||||||    
T  53779005 gggtctgtttgggaaacctaaaaaaagagcttttagcttttagcttata 53779053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 154
Target Start/End: Original strand, 889701 - 889736
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataag 154  Q
    |||| |||||||||||||||||||||||||||||||    
T  889701 aaaagagcttttagcttttagcttatagcttataag 889736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 207
Target Start/End: Complemental strand, 32983011 - 32982980
Alignment:
Q  176 tgtttggtaacactttttcaccatgagcttat 207  Q
    ||||||||||||||||||||||||||||||||    
T  32983011 tgtttggtaacactttttcaccatgagcttat 32982980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 5505852 - 5505907
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaac 186  Q
    ||||| ||||||||||||||||||||||||||||       |||||||||||||||    
T  5505852 agcttatagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaac 5505907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 2187347 - 2187314
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgac 164  Q
    ||||||||||||||||| ||||||||||||||||    
T  2187347 agcttttagcttatagcctataagctcgtttgac 2187314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 31558349 - 31558316
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgac 164  Q
    |||||| |||||||||||||||||||||||||||    
T  31558349 agctttgagcttatagcttataagctcgtttgac 31558316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 12897 - 12778
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||    
T  12897 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcac 12798  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  12797 catgagcttatagcttattt 12778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 28709273 - 28709392
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  28709273 gggtctgtttgggaaaacccaaaaaagagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 28709372  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  28709373 catgagcttatagcttattt 28709392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 28716630 - 28716749
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  28716630 gggtctgtttgggaaaacccaaaaaagagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 28716729  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  28716730 catgagcttatagcttattt 28716749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 25023272 - 25023391
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||   || |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  25023272 gggtctgtttgggaaactaaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 25023371  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  25023372 catgagcttatagcttattt 25023391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 17081620 - 17081739
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  17081620 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 17081719  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  17081720 catgagcttatagcttattt 17081739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 36681626 - 36681508
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| | || |||| |||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  36681626 gggtctgtttgggaaa-ctaaaaaaagagcttttaacttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 36681528  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  36681527 catgagcttatagcttattt 36681508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 38171607 - 38171488
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| || | |||| |||||||||||||||| ||||||||||||||||||||||||       ||||||||||||||||||| |||||    
T  38171607 gggtctgtttgggaaaccccaaaaaagagcttttagcttttagtttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttgttcac 38171508  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  38171507 catgagcttatagcttattt 38171488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 31581682 - 31581779
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  31581682 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 31581779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 32541215 - 32541308
Alignment:
Q  123 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  32541215 tagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 32541308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 1894022 - 1893902
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttga-cnnnnnnngctctgtttggtaacactttttca 195  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||    
T  1894022 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgataaaaaaaagttctgtttggtaacactttttca 1893923  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||    
T  1893922 ccatgagcttatagcttattt 1893902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 31478069 - 31478161
Alignment:
Q  124 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  31478069 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 31478161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 45141639 - 45141516
Alignment:
Q  92 atatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttt 191  Q
    |||| ||||||||||||  || |||| |||| || ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  45141639 atattgggtctgtttggttaatccaa-aaaagagtttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttt 45141541  T
Q  192 ttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||    
T  45141540 ttcaccatgagcttatagcttattt 45141516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 39702272 - 39702391
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||   || |||| | |||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  39702272 gggtctgtttgggaaactaaaaaaaagaacttttaacttttagcttatagcttataagctcgtttgacataaaaagctctgtttggtaacactttttcac 39702371  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  39702372 catgagcttatagcttattt 39702391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 17115526 - 17115623
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  17115526 aaaagagcttttagcttttagcttatagcttataagctcgtttgaaaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 17115623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 44827475 - 44827378
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  44827475 aaaagagcttttagtttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 44827378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 10618773 - 10618891
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||||        | | |||||||||||||||||||||    
T  10618773 gggtctgtttgggaaa-ccaaaaaaagagcttttagtttttagcttatagcttataagctcgtttgataaaaaaagttttgtttggtaacactttttcac 10618871  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  10618872 catgagcttatagcttattt 10618891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 39871235 - 39871349
Alignment:
Q  100 tctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccat 199  Q
    ||||||||||||| | || |||| |||||||||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||    
T  39871235 tctgtttgggaaa-ctaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgac-aaaaaagctctatttggtaacactttttcaccat 39871332  T
Q  200 gagcttatagcttattt 216  Q
    |||||||||||||||||    
T  39871333 gagcttatagcttattt 39871349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 27781102 - 27781187
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  27781102 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 27781187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 42142893 - 42142796
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  42142893 aaaagagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttattt 42142796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 43276925 - 43276832
Alignment:
Q  123 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  43276925 tagcttttagcttatagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 43276832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 22878105 - 22877986
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| || ||| | |||| ||||| ||||| ||| |||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  22878105 gggtctgtttggtaacacccaaaaaagagcttatagctcttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 22878006  T
Q  197 catgagcttatagcttattt 216  Q
    ||||| ||||||||||||||    
T  22878005 catgaacttatagcttattt 22877986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 8270870 - 8270991
Alignment:
Q  97 gggtctgtttgggaaa--accaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttc 194  Q
    ||||||||||||||||  |  || |||| ||||||||| ||||| |||||||||||||||||||||||||       ||||||||||||||||||||||     
T  8270870 gggtctgtttgggaaactaaaaaaaaaagagcttttagtttttaccttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttt 8270969  T
Q  195 accatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||    
T  8270970 accatgagcttatagcttattt 8270991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 41313375 - 41313460
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  41313375 agcttttagcttatagcttataaactcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 41313460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 16422795 - 16422914
Alignment:
Q  96 cgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttca 195  Q
    |||||||||||||  || |||| |||| |||||||||||||||||||||||| |||||||||||||||        ||||||||| ||||||||||||||    
T  16422795 cgggtctgtttggttaacccaa-aaaagagcttttagcttttagcttatagcctataagctcgtttgataaaaaaagctctgtttagtaacactttttca 16422893  T
Q  196 ccatgagcttatagcttattt 216  Q
     ||||||||||||||||||||    
T  16422894 tcatgagcttatagcttattt 16422914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 6338284 - 6338403
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||| ||    
T  6338284 gggtctgtttggttaaccccaaaaaagagcttttagcttctagcttatagcttataagctcgtttgataaaaaaaactctgtttggtaacacttttttac 6338383  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  6338384 catgagcttatagcttattt 6338403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 31688189 - 31688111
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  31688189 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 31688111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 24652232 - 24652352
Alignment:
Q  95 tcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttc 194  Q
    |||||||||||||| || ||| | |||| |||||||| || ||| |||||||||||||||||||||||||       | ||||||||||||||| |||||    
T  24652232 tcgggtctgtttggtaacacccaaaaaagagcttttacctcttatcttatagcttataagctcgtttgacaaagaaagttctgtttggtaacac-ttttc 24652330  T
Q  195 accatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||    
T  24652331 accatgagcttatagcttattt 24652352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 32099501 - 32099622
Alignment:
Q  96 cgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgac-nnnnnnngctctgtttggtaacactttttc 194  Q
    ||||||||||||| || ||| | |||| ||||| ||||| |||||||||||||||||||||||||||||         ||||||||| ||||||||||||    
T  32099501 cgggtctgtttggtaacacccaaaaaagagcttatagctcttagcttatagcttataagctcgtttgacaaaaaaaatctctgtttgataacactttttc 32099600  T
Q  195 accatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||    
T  32099601 accatgagcttatagcttattt 32099622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 39320212 - 39320127
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||  |||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  39320212 agcttttagcttatagcttataaattcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 39320127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 23676837 - 23676957
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttga-cnnnnnnngctctgtttggtaacactttttca 195  Q
    ||||||||||||  || || | |||| ||||||||||||||||||||||||||||||||||||||||         | ||| ||||||||||||||||||    
T  23676837 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgataaaaaaaagttctctttggtaacactttttca 23676936  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||    
T  23676937 ccatgagcttatagcttattt 23676957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 37587899 - 37587779
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttca 195  Q
    |||||||||||| || ||| | |||| || |||||||| ||||||||||||||||||||||||||||         | ||||||||||||||||||||||    
T  37587899 gggtctgtttggtaacacccaaaaaagagtttttagctcttagcttatagcttataagctcgtttgataaaaaaaagttctgtttggtaacactttttca 37587800  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||    
T  37587799 ccatgagcttatagcttattt 37587779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 16831500 - 16831614
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| || ||||| |||| || |||||||| ||| ||||||||||||||| |||||||||       | || ||||||||||||||||||||    
T  16831500 gggtctgtttggtaacaccaaaaaaagagtttttagctcttaacttatagcttataagttcgtttgacaaaaaaagttcagtttggtaacactttttcac 16831599  T
Q  197 catgagcttatagct 211  Q
    |||||||||||||||    
T  16831600 catgagcttatagct 16831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 11298226 - 11298102
Alignment:
Q  92 atatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttt 191  Q
    |||| |||||||||||| || ||| | |||| || || ||||| |||||||||||||||||||||||||||||        ||||||||||||||| |||    
T  11298226 atatagggtctgtttggtaacacccaaaaaagaggttatagctcttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacatttt 11298127  T
Q  192 ttcaccatgagcttatagcttattt 216  Q
    |||| ||| ||||||||||||||||    
T  11298126 ttcatcatcagcttatagcttattt 11298102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 34395528 - 34395408
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgac-nnnnnnngctctgtttggtaacactttttca 195  Q
    |||||||||||| ||| |  | |||| ||||||||||||||| |||||||||||||||||||||||||         ||||||||| ||||||||||| |    
T  34395528 gggtctgtttggtaaaccttaaaaaagagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaaaactctgtttgataacactttttga 34395429  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||    
T  34395428 ccatgagcttatagcttattt 34395408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 37560709 - 37560590
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| |||  ||| |||| ||||||||||| ||| |||||||||||||||||||||| ||       | |||||||||||||||||||| |     
T  37560709 gggtctgtttggtaaactcaaaaaaagagcttttagctcttaacttatagcttataagctcgtttcacaaaaaaagttctgtttggtaacactttttgat 37560610  T
Q  197 catgagcttatagcttattt 216  Q
    ||||| ||||||||||||||    
T  37560609 catgaacttatagcttattt 37560590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 40223263 - 40223144
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgac--nnnnnnngctctgtttggtaacactttttc 194  Q
    |||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||||| |||||||         |||||||||||||||||  ||||    
T  40223263 gggtctgtttggtaacacccaaaaaagagcttttagctcttagcttatagcttataagcttgtttgacaaaaaaaaagctctgtttggtaacac--tttc 40223166  T
Q  195 accatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||    
T  40223165 accatgagcttatagcttattt 40223144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 41694055 - 41693967
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnn---gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||          |||||||||||||||| ||||||||||||||||||||||||||||    
T  41694055 agcttttagcttatagcttataagctcgtttgacaaaatttttagctctgtttggtaacattttttcaccatgagcttatagcttattt 41693967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 36112944 - 36112902
Alignment:
Q  174 tctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36112944 tctgtttggtaacactttttcaccatgagcttatagcttattt 36112902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 42203522 - 42203452
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttata 208  Q
    ||||| |||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||    
T  42203522 agcttttagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccacgagcttata 42203452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 44157204 - 44157282
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||| ||||         |||||||||||| ||||||||||||||||||||||||||||||    
T  44157204 agcttatagcttataagctcgtctgacaaaaaaaattctgtttggtaatactttttcaccatgagcttatagcttattt 44157282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 3427767 - 3427682
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| |||||||||| |||||||||||| ||||       ||||||||||||||  |||||||||||||| ||||||||||||||    
T  3427767 agcttatagcttataggttataagctcgtctgacaaaaaaagctctgtttggtaatgctttttcaccatgaccttatagcttattt 3427682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 43849346 - 43849267
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttt 217  Q
    |||||||| ||||||||||||||||||       |||||||||||||||| ||||| || | ||||||||||||||||||    
T  43849346 agcttataacttataagctcgtttgacaaaaaaagctctgtttggtaacaattttttacaacgagcttatagcttatttt 43849267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 11741251 - 11741206
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgac 164  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  11741251 aaaagagcttttagcttttagtttatagcttataagctcgtttgac 11741206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 9210974 - 9211071
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||  | ||||||||||||||||||| | |||||||       |||| ||||| ||||||||||| |||||||||||||| |||||||    
T  9210974 aaaagagcttttaattcttagcttatagcttataagtttgtttgacaaaaaaagctccgtttgataacactttttgaccatgagcttataacttattt 9211071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 36590105 - 36590222
Alignment:
Q  100 tctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngct-ctgtttggtaacactttttcacca 198  Q
    ||||||||| || ||| | |||| ||||||||||| |||  ||||||||||||| ||||||||||         | ||||||||||||||||||| ||||    
T  36590105 tctgtttggtaacacccaaaaaagagcttttagctcttaatttatagcttataaactcgtttgacaaaaaaaaattctgtttggtaacacttttttacca 36590204  T
Q  199 tgagcttatagcttattt 216  Q
    |||||||||| |||||||    
T  36590205 tgagcttataacttattt 36590222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 2642523 - 2642479
Alignment:
Q  172 gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||    
T  2642523 gctctgtttggtaatattttttgaccatgagcttatagcttattt 2642479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 7378848 - 7378933
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||| |||||||||||||| |||| ||||       ||||||||||||||| |||||| || | |||||||||||||||||    
T  7378848 agcttatagtttatagcttataagttcgtctgacaaaagaagctctgtttggtaacgcttttttacaacgagcttatagcttattt 7378933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 39747073 - 39747000
Alignment:
Q  143 atagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||       ||||||||||||||   |||||||||| ||||||||| |||||||    
T  39747073 atagcttataagctcgtttgaccaaaaaagctctgtttggtaatgttttttcaccacgagcttataacttattt 39747000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 40551856 - 40551894
Alignment:
Q  178 tttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  40551856 tttggtaacattttttcaccatgagtttatagcttattt 40551894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 22957354 - 22957394
Alignment:
Q  176 tgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| |||||| ||||| ||||||||||||||||||||||    
T  22957354 tgtttcgtaacatttttttaccatgagcttatagcttattt 22957394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 13111920 - 13111800
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctg-tttggtaacactttttca 195  Q
    |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||       |||||| ||||||||||||||||||    
T  13111920 gggtctgtttgggaaaccccaaaaaatagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgttttggtaacactttttca 13111821  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||    
T  13111820 ccatgagcttatagcttattt 13111800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 5039739 - 5039858
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| || | |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  5039739 gggtctgtttgggaaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 5039838  T
Q  197 catgagcttatagcttattt 216  Q
    | ||||||||||||||||||    
T  5039839 cgtgagcttatagcttattt 5039858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 36999454 - 36999572
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  36999454 gggtctgtttgggaaa-ccaaaaaaagagcttttagcttttagtttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 36999552  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  36999553 catgagcttatagcttattt 36999572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 3377357 - 3377475
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || |||| |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  3377357 gggtctgtttggttaacccaa-aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 3377455  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  3377456 catgagcttatagcttattt 3377475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 16486847 - 16486965
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || |||| |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  16486847 gggtctgtttggttaacccaa-aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 16486945  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  16486946 catgagcttatagcttattt 16486965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 41322720 - 41322839
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||   || |||| ||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  41322720 gggtctgtttgggaaataaaaaaaaagagcttttagcttttatcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 41322819  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  41322820 catgagcttatagcttattt 41322839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 36712696 - 36712594
Alignment:
Q  114 ccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagctta 213  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  36712696 ccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagctta 36712597  T
Q  214 ttt 216  Q
    |||    
T  36712596 ttt 36712594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 4453678 - 4453581
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  4453678 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 4453581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 9886978 - 9887075
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  9886978 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 9887075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 28382831 - 28382738
Alignment:
Q  123 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  28382831 tagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 28382738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 10839757 - 10839638
Alignment:
Q  96 cgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttca 195  Q
    ||||||||||||||||| |||| |||| | |||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||    
T  10839757 cgggtctgtttgggaaa-ccaaaaaaagaacttttagcttttagcttatagcttataaactcgtttgacaaaaaaagctctgtttggtaacactttttca 10839659  T
Q  196 ccatgagcttatagcttattt 216  Q
    ||||||||||||| |||||||    
T  10839658 ccatgagcttatatcttattt 10839638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 2266328 - 2266210
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| | ||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||    
T  2266328 gggtctgtttgggaaacccaaaaaaaaa-cttttagcttttagcttatagtttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcac 2266230  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  2266229 catgagcttatagcttattt 2266210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 40025119 - 40025000
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||  | | |||| |||||||||||||||||||||||| ||||||||||||||||       | |||||||||||||||||||||||    
T  40025119 gggtctgtttgggaaactccaaaaaagagcttttagcttttagcttatagcatataagctcgtttgacaaaaaaagttctgtttggtaacactttttcac 40025020  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  40025019 catgagcttatagcttattt 40025000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 38579156 - 38579066
Alignment:
Q  126 cttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  38579156 cttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 38579066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 8689117 - 8689020
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  8689117 aaaagagcttttagcttttagtttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 8689020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 15521469 - 15521562
Alignment:
Q  123 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||||||||||||||||||||||||||||    
T  15521469 tagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaaaactttttcaccatgagcttatagcttattt 15521562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 37356132 - 37356252
Alignment:
Q  96 cgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttga-cnnnnnnngctctgtttggtaacactttttc 194  Q
    ||||||||||||||||| | || |||| || ||||||||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||    
T  37356132 cgggtctgtttgggaaa-ctaaaaaaagagtttttagcttttagcttatagcttataagctcgtttgaccaaaaaaagctctgtttggtaacactttttc 37356230  T
Q  195 accatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||    
T  37356231 accatgagcttatagcttattt 37356252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 650957 - 650838
Alignment:
Q  96 cgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttca 195  Q
    |||||||||||||  || || | |||| ||||||||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||    
T  650957 cgggtctgtttggttaaccccaaaaaagagcttttagcttt-agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttca 650859  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||    
T  650858 ccatgagcttatagcttattt 650838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 18212111 - 18212203
Alignment:
Q  124 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  18212111 agcttttagcttttaccttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 18212203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 21865210 - 21865330
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttca 195  Q
    ||||||||||||  || || | |||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  21865210 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaaagctctgtttggtaacactttttca 21865309  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||    
T  21865310 ccatgagcttatagcttattt 21865330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 2546501 - 2546382
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||| |||| || | |||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||  |||| ||    
T  2546501 gggtctgtttgagaaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacaaattttaac 2546402  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  2546401 catgagcttatagcttattt 2546382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 6760781 - 6760662
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| |||  ||| |||| ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| ||    
T  6760781 gggtctgtttggtaaactcaaaaaaagagcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgac 6760682  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  6760681 catgagcttatagcttattt 6760662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 8815199 - 8815296
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  8815199 aaaagagcctttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 8815296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 10393180 - 10393093
Alignment:
Q  129 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||| ||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  10393180 ttagcttatagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 10393093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 18710155 - 18710265
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| | || |||| ||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||| ||    
T  18710155 gggtctgtttgggaaa-ctaaaaaaagagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttac 18710253  T
Q  197 catgagcttata 208  Q
    ||||||||||||    
T  18710254 catgagcttata 18710265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 4038495 - 4038398
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||        | |||||||||||||||||||||||||||||||||||||||||||    
T  4038495 aaaagagcttttagcttttagcttatagcttacaagctcgtttgataaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttattt 4038398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 24402222 - 24402110
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||       ||||||||||||||||       |||||||||||||||||||||||||    
T  24402222 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagct-------tataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 24402130  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  24402129 catgagcttatagcttattt 24402110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 26911470 - 26911594
Alignment:
Q  91 catatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactt 190  Q
    ||||| |||||||||||| || ||| | |||| ||||||||||| ||| |||||||||||||||||||||||||        |||| |||||||||||||    
T  26911470 catatagggtctgtttggtaacacccaaaaaagagcttttagctcttaacttatagcttataagctcgtttgacaaaaaaa-ctctctttggtaacactt 26911568  T
Q  191 tttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||    
T  26911569 tttcaccatgagcttatagcttattt 26911594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 43507705 - 43507620
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||||||||||||||    
T  43507705 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttattt 43507620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 4385675 - 4385583
Alignment:
Q  124 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||| |||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||| |||||||||||||    
T  4385675 agcttttagctcttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagtttatagcttattt 4385583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 31616528 - 31616444
Alignment:
Q  132 gcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||||||||||||    
T  31616528 gcttttagcttatagcttataagctcgtttgacaaaaaaagctttgtttggtaacactttttcaccatgagcttatagcttattt 31616444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 37560780 - 37560721
Alignment:
Q  17 cacagacgtggagagaatgatgttatacctgcgatcaacatagtatcatgtcttttcctc 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37560780 cacagacgtggagagaatgatgttatacctgcgatcaacatagtatcatgtcttttcctc 37560721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 39167756 - 39167834
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  39167756 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 39167834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 43135603 - 43135700
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||        |||||||||| ||||||||||||| ||||||||||||||||||||    
T  43135603 aaaagagcttttagcttttagcttatagcttataagttcgtttgataaaaaaagctctgtttgataacactttttcatcatgagcttatagcttattt 43135700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 6232435 - 6232338
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||| |||||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||||||| ||||||    
T  6232435 aaaagagcttttagctcttagcttataacttataagctcgtttgacaaaaaatattctgtttggtaacactttttcaccatgagcttatagtttattt 6232338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 13528059 - 13527962
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||       |||||||| |||||||| ||||||||||||| ||||| |||||||    
T  13528059 aaaaaagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgttcggtaacaccttttcaccatgagtttataacttattt 13527962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 17263896 - 17263811
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||| |||||||||||||||||||||       ||||||||||||||||  |||||||||||||||||||||||||||    
T  17263896 agcttttagcttttagcttataagctcgtttgacaaaaaaagctctgtttggtaacatgttttcaccatgagcttatagcttattt 17263811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 7400529 - 7400449
Alignment:
Q  136 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  7400529 ttagtttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 7400449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 29514832 - 29514916
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||| |||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||||||||    
T  29514832 agcttttagcttttagcttataagctcgtttgacaaaaaa-gctctgtttggtaacactttttcaccaagagcttatagcttattt 29514916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 38880959 - 38880840
Alignment:
Q  98 ggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcac 196  Q
    ||||||||||| |||  ||| |||| |||||||| || |||||||||||||||||||||||||| ||        | |||||||||||||||||||| ||    
T  38880959 ggtctgtttggtaaattcaaaaaaagagcttttaactcttagcttatagcttataagctcgtttcacaaaaaaaagttctgtttggtaacactttttgac 38880860  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  38880859 catgagcttatagcttattt 38880840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 40869504 - 40869417
Alignment:
Q  129 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||| |||||||||| |||||||||| ||||||       | |||||||||||||||||||||||||||||||||||||||||||    
T  40869504 ttagcttatagcttatagtttataagctcatttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttattt 40869417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 41796919 - 41796800
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| ||| | |  |||| ||||||||||| ||||||||||| |||||||||||||| |        ||||||||| |||||||||||| ||    
T  41796919 gggtctgtttggtaaaccaataaaaagagcttttagctcttagcttatagtttataagctcgttttataaaaaaagctctgtttcgtaacactttttgac 41796820  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  41796819 catgagcttatagcttattt 41796800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 6153625 - 6153509
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| || | | | |||| ||||||||||| |||||||||||||||||||||||||||||       | | |||||||||| ||||||| ||    
T  6153625 gggtctgtttggtaacatccaaaaaagagcttttagctcttagcttatagcttataagctcgtttgac-aaaaaagttttgtttggtaaaacttttttac 6153527  T
Q  197 catgagcttatagcttat 214  Q
    ||||||||||||||||||    
T  6153526 catgagcttatagcttat 6153509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 8339965 - 8340063
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttt 217  Q
    |||| ||||||||||| ||| ||||||| ||||||| |||||||||       | |||||||||||||||||||||| ||||||||||||| |||||||    
T  8339965 aaaagagcttttagctcttaacttatagtttataagttcgtttgacgaaaaaagttctgtttggtaacactttttcatcatgagcttatagtttatttt 8340063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 43285657 - 43285701
Alignment:
Q  172 gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  43285657 gctctgtttggtaacactttttcaccatgagcttatagcttattt 43285701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 44275630 - 44275745
Alignment:
Q  100 tctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccat 199  Q
    ||||||||| ||| | || |||| ||||||||||| |||||||||||||||||||||||||| ||         | |||||||||||||||||| ||||     
T  44275630 tctgtttggtaaacctaaaaaaagagcttttagctcttagcttatagcttataagctcgtttcacaaaaaaa-ttatgtttggtaacactttttgaccac 44275728  T
Q  200 gagcttatagcttattt 216  Q
    |||||||||||||||||    
T  44275729 gagcttatagcttattt 44275745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 8070756 - 8070678
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| |||||||||| ||||||||||        || ||||||||||||||||||||||||||||||||| |||||||    
T  8070756 agcttctagcttataaactcgtttgacaaaaaaaactttgtttggtaacactttttcaccatgagcttataacttattt 8070678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 10727824 - 10727913
Alignment:
Q  127 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||||||||||||||||| ||| |||||||        | |||||||| ||||||||||||| ||| ||||||||||||||||    
T  10727824 ttttaacttttagcttatagcttattagcccgtttgataaaaaaagttctgtttgataacactttttcatcataagcttatagcttattt 10727913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 38842875 - 38842918
Alignment:
Q  173 ctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||| |||||||||||||||| |||||||||||||    
T  38842875 ctctgtttggtaatactttttcaccatgagtttatagcttattt 38842918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 42132708 - 42132750
Alignment:
Q  174 tctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  42132708 tctgtttggtaacaccttttcatcatgagcttatagcttattt 42132750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 7569776 - 7569861
Alignment:
Q  124 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttata 208  Q
    |||||||| || | ||||||||||||||||||||||||||         | |||||||||||||||||||| ||||||||||||||    
T  7569776 agcttttaactctcagcttatagcttataagctcgtttgataaaaaaaagttctgtttggtaacacttttttaccatgagcttata 7569861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 7213762 - 7213719
Alignment:
Q  173 ctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||| ||| ||||||| ||||||||||||||||||||||    
T  7213762 ctctgtttgataatactttttgaccatgagcttatagcttattt 7213719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 13761777 - 13761810
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgac 164  Q
    ||||| ||||||||||||||||||||||||||||    
T  13761777 agcttatagcttatagcttataagctcgtttgac 13761810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 22375955 - 22375987
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttga 163  Q
    ||||| |||||||||||||||||||||||||||    
T  22375955 agcttatagcttatagcttataagctcgtttga 22375987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 5e-37; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 10312217 - 10312098
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||   || |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  10312217 gggtctgtttgggaaactaaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 10312118  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  10312117 catgagcttatagcttattt 10312098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 42587570 - 42587452
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||| |||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  42587570 gggtctgtttgagaaa-ccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 42587472  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  42587471 catgagcttatagcttattt 42587452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 43254070 - 43254189
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||   || |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  43254070 gggtctgtttgggaaactaaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 43254169  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  43254170 catgagcttatagcttattt 43254189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 45687103 - 45686985
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||| ||||||||| | || |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  45687103 gggtctatttgggaaa-ctaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 45687005  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  45687004 catgagcttatagcttattt 45686985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 36246538 - 36246445
Alignment:
Q  123 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  36246538 tagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 36246445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 32168800 - 32168919
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| ||  || | |||| ||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  32168800 gggtctgtttggtaacgcccaaaaaagagcttttagctcttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 32168899  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  32168900 catgagcttatagcttattt 32168919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 43134372 - 43134490
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||| ||    
T  43134372 gggtctgtttggtaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttcac-aaaaaagctctgtttggtaacactttttgac 43134470  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  43134471 catgagcttatagcttattt 43134490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 216
Target Start/End: Original strand, 44743689 - 44743803
Alignment:
Q  102 tgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatga 201  Q
    ||||||| || ||| | |||| ||||||||||| ||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||    
T  44743689 tgtttggtaacacccaaaaaaaagcttttagctcttagcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatga 44743788  T
Q  202 gcttatagcttattt 216  Q
    |||||||||||||||    
T  44743789 gcttatagcttattt 44743803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 21254863 - 21254766
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||| |||||||||||||||||||    
T  21254863 aaaagagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcactatgagcttatagcttattt 21254766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 27089810 - 27089725
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  27089810 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 27089725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 27188491 - 27188576
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  27188491 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 27188576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 40637326 - 40637229
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||||||||||    
T  40637326 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggcaacactttttcaccatgagcttatagcttattt 40637229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 42375948 - 42375852
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  42375948 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaa-ctctgtttggtaacactttttcaccatgagcttatagcttattt 42375852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 40258824 - 40258943
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||||| |||||||       ||| |||||||||||||||||||||    
T  40258824 gggtctgtttggtaacacccaaaaaagagcttttagctcttagcttatagcttataagcttgtttgacagaaaaagctatgtttggtaacactttttcac 40258923  T
Q  197 catgagcttatagcttattt 216  Q
    |||||||||||| |||||||    
T  40258924 catgagcttataacttattt 40258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 47471149 - 47471031
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || |||| |||| ||| |||||||||||||||||||||||||||||||||||||       | |||||||||||| ||||||||||    
T  47471149 gggtctgtttggttaacccaa-aaaagagcgtttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaatactttttcac 47471051  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  47471050 catgagcttatagcttattt 47471031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 36436121 - 36436239
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||||||||||||||||| ||||||||||||||||||       ||| |||||||||||||||||||||    
T  36436121 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatatcttataagctcgtttgacaaaaaa-gctatgtttggtaacactttttcac 36436219  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  36436220 catgagcttatagcttattt 36436239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 21374622 - 21374719
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  21374622 aaaagagcttttagcttttagcttatagcttataagcttgtttgacaaaaaaaattctgtttggtaacactttttcaccatgagcttatagcttattt 21374719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 31511301 - 31511386
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  31511301 agcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttattt 31511386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 21313979 - 21313858
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn--gctctgtttggtaacactttttc 194  Q
    |||||||||||| || ||| | |||| | ||||||||| ||| |||||||||||||||||||||||||         |||||||||||||||||||||||    
T  21313979 gggtctgtttggtaatacccaaaaaagaacttttagctcttaacttatagcttataagctcgtttgacaaaaaaaaagctctgtttggtaacactttttc 21313880  T
Q  195 accatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||    
T  21313879 accatgagcttatagcttattt 21313858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 483148 - 483051
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||       ||| |||||||||||||||||| ||||||||||||||||||||||    
T  483148 aaaagagcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctttgtttggtaacactttttgaccatgagcttatagcttattt 483051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 9487396 - 9487493
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||       | |||||||||||||||||||| || |||||||||||||||||||    
T  9487396 aaaagagcttttagcttttagcttatagcttataagctcgtctgacaaaaaaagttctgtttggtaacacttttttactatgagcttatagcttattt 9487493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 35587580 - 35587665
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||||||||    
T  35587580 agcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttgataacactttttcaccatgagcttatagcttattt 35587665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 40106159 - 40106074
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||  |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  40106159 agcttttagctcttagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 40106074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 48832207 - 48832122
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||| |||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||||||||||||    
T  48832207 agcttttagcttttagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccgtgagcttatagcttattt 48832122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 44596572 - 44596696
Alignment:
Q  92 atatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttt 191  Q
    ||||||||||| ||||| ||| | || |||| ||||||||||| ||||||||||| |||||||||||||| ||         ||||||||||||||||||    
T  44596572 atatcgggtctttttggtaaacctaaaaaaagagcttttagctcttagcttatagtttataagctcgtttcacaaaaaaaattctgtttggtaacacttt 44596671  T
Q  192 ttcaccatgagcttatagcttattt 216  Q
    || ||||||||||||||||||||||    
T  44596672 tttaccatgagcttatagcttattt 44596696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 48313611 - 48313493
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||||||||||| |||||| ||||||| |||||||||       |||||| ||||||||||||||||||    
T  48313611 gggtctgtttggttaaccccaaaaaagagcttttagcttttaggttatagtttataagttcgtttgacaaaaaa-gctctgattggtaacactttttcac 48313513  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  48313512 catgagcttatagcttattt 48313493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 33203826 - 33203737
Alignment:
Q  127 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||| |||||| ||||||| || ||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  33203826 ttttagcttttagtttatagtttataagttcctttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 33203737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 45222227 - 45222142
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||| |||||||||||||||||       | ||||||||||||||| |||||||||||||||||||||||||||    
T  45222227 agcttttagcttatagtttataagctcgtttgacaaaaaaagttctgtttggtaacaccttttcaccatgagcttatagcttattt 45222142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 21741938 - 21742058
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgac-nnnnnnngctctgtttggtaacactttttca 195  Q
    ||||||||||||  || || | |||| ||||||||| |||||||||||||||||||||||||||||||          ||||||||||||||| ||||||    
T  21741938 gggtctgtttggttaaccccaaaaaagagcttttagattttagcttatagcttataagctcgtttgacaaaaaaaaattctgtttggtaacaccttttca 21742037  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||    
T  21742038 ccatgagcttatagcttattt 21742058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 36407195 - 36407314
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||| ||||||| ||| |||| |||| |||||||| || ||||||||||||||||||| |||||| ||       | |||||||||||||||||||| ||    
T  36407195 gggtatgtttggtaaacccaaaaaaagagcttttaactcttagcttatagcttataagttcgtttcacaaaaaaagttctgtttggtaacactttttgac 36407294  T
Q  197 catgagcttatagcttattt 216  Q
    |||||||||||| |||||||    
T  36407295 catgagcttataacttattt 36407314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 47587290 - 47587174
Alignment:
Q  98 ggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcacc 197  Q
    |||||||||| |||| |||| |||| || ||||||||||||||||||||||||||| ||||| |||         |||||||||||||||||||| ||||    
T  47587290 ggtctgtttgagaaacccaa-aaaagagattttagcttttagcttatagcttataaactcgtctgataaaaaaaactctgtttggtaacactttt-cacc 47587193  T
Q  198 atgagcttatagcttattt 216  Q
    |||||||||||||||||||    
T  47587192 atgagcttatagcttattt 47587174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 21316730 - 21316653
Alignment:
Q  139 gcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||||| |||||||||||||||||||    
T  21316730 gcttatagcttataagctcgtttgaccaaaaaaactctgtttggtaacactttttcactatgagcttatagcttattt 21316653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 49148321 - 49148418
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||| |||||| ||||||||||||||  ||||||       ||||||||| ||||||||||| |||||||||||||||||||||||    
T  49148321 aaaaaagcttttagctcttagctaatagcttataagcttttttgacaaaaaaagctctgtttagtaacacttttccaccatgagcttatagcttattt 49148418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 27655834 - 27655742
Alignment:
Q  124 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| |||||| |||||| ||||||||||||||||||||        |||||||||||||| ||||||| ||||||||||||||||||||||    
T  27655834 agcttatagcttatagcttttagcttataagctcgtttgataaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttattt 27655742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 38481286 - 38481366
Alignment:
Q  136 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||| |||||||||       ||||||||||||||||||||||||||||||  |||||||||||||    
T  38481286 ttagcttatagcttataagttcgtttgacaaaaacagctctgtttggtaacactttttcaccatgaatttatagcttattt 38481366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 17192629 - 17192511
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| || ||| | |||| || |||||||| ||| ||||||| ||||||| |||||||||       ||||||||||||||||| |||||||    
T  17192629 gggtctgtttggtaacacccaaaaaagagtttttagctcttaacttatagtttataagttcgtttgacaaaaaaagctctgtttggtaacac-ttttcac 17192531  T
Q  197 catgagcttatagcttattt 216  Q
    |||||| |||||||||||||    
T  17192530 catgagtttatagcttattt 17192511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 19832137 - 19832059
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||||||||||||||||||        |||||||||||||||| ||||||||||||||||||||||||||||    
T  19832137 agcttttagcttataagctcgtttgataaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttattt 19832059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 33026918 - 33026962
Alignment:
Q  172 gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  33026918 gctctgtttggtaacactttttcaccatgagcttatagcttattt 33026962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 34709234 - 34709319
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||| ||||||||||| | |||||||       ||||||| |||||||||||||||||||||||||||||| ||||||    
T  34709234 agcttttagcttttagcttataagtttgtttgactaaaaaagctctgtctggtaacactttttcaccatgagcttatagtttattt 34709319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 48590756 - 48590800
Alignment:
Q  172 gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  48590756 gctctgtttggtaacactttttcaccatgagcttatagcttattt 48590800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 11466200 - 11466108
Alignment:
Q  124 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||| || |||||| ||||||||||||||||||||        |||||||||||||| ||||||| ||||||||||||||||||||||    
T  11466200 agcttatagtttatagcttttagcttataagctcgtttgataaaaaaagctctgtttggtaatactttttaaccatgagcttatagcttattt 11466108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 28425767 - 28425680
Alignment:
Q  129 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||| ||||||||||||||||| ||||||||||       | | |||||||||||  ||||||||||||||||||||||||||||    
T  28425767 ttagcttatagcttatagcttataaactcgtttgacaaaaaatgttttgtttggtaactttttttcaccatgagcttatagcttattt 28425680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 1342777 - 1342862
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||||||||||||||||||||| ||||       ||||||||||||||| |||||| || | |||||||||||||||||    
T  1342777 agcttatagcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgcttttttacaacgagcttatagcttattt 1342862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 9485727 - 9485802
Alignment:
Q  141 ttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||| |||||||||        |||| |||| ||||||||||||||||||||||||||||||||||    
T  9485727 ttatagcttataagttcgtttgacaaaaaaaactctctttgataacactttttcaccatgagcttatagcttattt 9485802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 17844544 - 17844630
Alignment:
Q  130 tagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||| ||| |||||| |||||||||||| ||||       ||||||||||||||  || ||||||||||||||||||||||||||    
T  17844544 tagcttatagtttatagtttataagctcgtctgacaaaaaaagctctgtttggtaatgctatttcaccatgagcttatagcttattt 17844630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 23029790 - 23029876
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||||||||||||||||||||| ||||        ||| ||||||||||  |||||||||||||||||||||||||||||    
T  23029790 agcttatagcttatagcttataagctcgtctgacgaaaattagctttgtttggtaatgctttttcaccatgagcttatagcttattt 23029876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 12345180 - 12345136
Alignment:
Q  172 gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  12345180 gctctgtttggtaacactttttcacgaagagcttatagcttattt 12345136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 38531294 - 38531250
Alignment:
Q  173 ctctgtttggtaacactttttcaccatgagcttatagcttatttt 217  Q
    ||||||||||||||||||||||||||||| || ||||||||||||    
T  38531294 ctctgtttggtaacactttttcaccatgatctaatagcttatttt 38531250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 22642362 - 22642320
Alignment:
Q  174 tctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||  |||||||||| |||||||||||||||||    
T  22642362 tctgtttggtaacggtttttcaccacgagcttatagcttattt 22642320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 31150589 - 31150471
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||    
T  31150589 gggtctgtttgggaaacccaaaaaaa-agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgttgggtaacactttttcac 31150491  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  31150490 catgagcttatagcttattt 31150471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 33562060 - 33561941
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||   || |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  33562060 gggtctgtttgggaaactaaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 33561961  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  33561960 catgagcttatagcttattt 33561941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 36838860 - 36838741
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||| |    
T  36838860 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttctc 36838761  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  36838760 catgagcttatagcttattt 36838741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 42064481 - 42064363
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| | || |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  42064481 gggtctgtttgggaaa-ctaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 42064383  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  42064382 catgagcttatagcttattt 42064363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 30721789 - 30721669
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgac-nnnnnnngctctgtttggtaacactttttca 195  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  30721789 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaaagctctgtttggtaacactttttca 30721690  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||| ||||||||||||||    
T  30721689 ccatgaacttatagcttattt 30721669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 7711119 - 7711000
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||     
T  7711119 gggtctgtttgggaaacccaaaaaaagagcttttagcttttagcttatagcttataagttcgtttgacaaaaaaaactctgtttggtaacactttttcat 7711020  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  7711019 catgagcttatagcttattt 7711000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 26843721 - 26843840
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||| ||| ||||||||||    
T  26843721 gggtctgtttggaaaatccaaaaaaatagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctatttgataatactttttcac 26843820  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  26843821 catgagcttatagcttattt 26843840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 29586129 - 29586247
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| | || |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||| ||    
T  29586129 gggtctgtttgggaaa-ctaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttac 29586227  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  29586228 catgagcttatagcttattt 29586247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 1918021 - 1918114
Alignment:
Q  123 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  1918021 tagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 1918114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 13121727 - 13121630
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  13121727 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 13121630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 39826592 - 39826689
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  39826592 aaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 39826689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 2479131 - 2479249
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||| |     
T  2479131 gggtctgtttgggaaa-ccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttat 2479229  T
Q  197 catgagcttatagcttattt 216  Q
    |||||| |||||||||||||    
T  2479230 catgagtttatagcttattt 2479249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 17046699 - 17046818
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||    
T  17046699 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctttgtttggtaacactttttcac 17046798  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  17046799 catgagcttatagcttattt 17046818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 47134695 - 47134577
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || |||| |||| ||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  47134695 gggtctgtttggttaacccaa-aaaagagcttttagcttttaccttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 47134597  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  47134596 catgagcttatagcttattt 47134577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 17500028 - 17499931
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  17500028 aaaagagcttttagcttttagtttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 17499931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 26204266 - 26204363
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  26204266 aaaagagcttttagcttttagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 26204363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 44909832 - 44909929
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  44909832 aaaagagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 44909929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 33524498 - 33524617
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| ||||||||||||||||||||||||||||||||| ||||||        |||||||||||||||||||||||||    
T  33524498 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagcttgtttgataaaaaaagctctgtttggtaacactttttcac 33524597  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  33524598 catgagcttatagcttattt 33524617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 15313211 - 15313332
Alignment:
Q  94 atcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttttt 193  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||| ||||||||||||||| ||||||||        ||||||||||||||||| ||||    
T  15313211 atcgggtctgtttgggaaacccaaaaaaagaacttttagcttttaacttatagcttataagttcgtttgataaaaaaagctctgtttggtaacac-tttt 15313309  T
Q  194 caccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||    
T  15313310 caccatgagcttatagcttattt 15313332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 19899051 - 19898954
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||       | |||||||||||||||||||||||||||||||||||||||||||    
T  19899051 aaaagagcttttagcttttagcttatagcttataagttcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttattt 19898954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 38676481 - 38676578
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  38676481 aaaaaagcttttagcttttaacttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 38676578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 2497919 - 2498011
Alignment:
Q  124 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||| |||||||||||||||||||||||||||    
T  2497919 agcttttagcttttagcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacaccttttcaccatgagcttatagcttattt 2498011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 36301247 - 36301151
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||||    
T  36301247 aaaagagcttttagcttttagcttatagcttataagctcgtttgac-aaaaaagctctgtttgataacactttttcaccatgagcttatagcttattt 36301151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 32368504 - 32368385
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||| |||||||||||||||||||||||| |||||||       |||||||||||||||||||||||||    
T  32368504 gggtctgtttggttaaccctaaaaaagagcttttaacttttagcttatagcttataagcttgtttgacaaaaaaagctctgtttggtaacactttttcac 32368405  T
Q  197 catgagcttatagcttattt 216  Q
    |||||||||||| |||||||    
T  32368404 catgagcttataacttattt 32368385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 34319359 - 34319478
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| ||| |||| |||| ||||||||||| |||||||||||||||||||||||||| ||       | |||||||||||||||||||| ||    
T  34319359 gggtctgtttggtaaacccaaaaaaagagcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagttctgtttggtaacactttttgac 34319458  T
Q  197 catgagcttatagcttattt 216  Q
    ||||| ||||||||||||||    
T  34319459 catgaccttatagcttattt 34319478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 50351036 - 50351121
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||||||||    
T  50351036 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttaaccatgagcttatagcttattt 50351121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 29704246 - 29704130
Alignment:
Q  100 tctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccat 199  Q
    ||||||||| ||| |||| | || ||||||||  ||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||    
T  29704246 tctgtttggtaaacccaaaataagagcttttaatttttagcttatagcttataagcttgtttgacaaaaaaagctctgtttggtaacactttttcaccat 29704147  T
Q  200 gagcttatagcttattt 216  Q
    ||||||||| |||||||    
T  29704146 gagcttataacttattt 29704130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 38967594 - 38967510
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  38967594 agcttttagcttatagcttataagctcgtttgacaaaaaa-gctctgtttggtaacactttttcaccatgagcttatagcttattt 38967510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 1507910 - 1507789
Alignment:
Q  96 cgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgac-nnnnnnngctctgtttggtaacactttttc 194  Q
    ||||||||||||| || ||| | |||| || |||||||| |||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  1507910 cgggtctgtttggtaacacccaaaaaagagtttttagctcttagcttatagcttataagctcgtttgacaaaaagaagctctgtttggtaacactttttc 1507811  T
Q  195 accatgagcttatagcttattt 216  Q
    ||||| || |||||||||||||    
T  1507810 accattagtttatagcttattt 1507789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 216
Target Start/End: Original strand, 3660920 - 3661034
Alignment:
Q  102 tgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatga 201  Q
    ||||||| || ||| | |||| ||||||||| | |||||||||||||||||||||| ||||||       | ||||||||||||||||||||||||||||    
T  3660920 tgtttggtaacacccaaaaaagagcttttagttcttagcttatagcttataagctcatttgacaacaaaagttctgtttggtaacactttttcaccatga 3661019  T
Q  202 gcttatagcttattt 216  Q
    ||||||| |||||||    
T  3661020 gcttatatcttattt 3661034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 49220605 - 49220519
Alignment:
Q  130 tagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||| |||||||| |||||||||    
T  49220605 tagcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccgtgagcttacagcttattt 49220519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 322869 - 322954
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||| |||||||       | |||||||||||||||||||| ||||||||||||||||||||||    
T  322869 agcttttagcttatagcttataagcttgtttgacaaaaaaagttctgtttggtaacacttttttaccatgagcttatagcttattt 322954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 3270663 - 3270747
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  3270663 agcttttagcttatagcttataagctcgtttgacaaaaaaaa-tctgtttggtaacactttttcaccatgagcttatagcttattt 3270747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 15348816 - 15348913
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||| || |||||||||||||||||||||||||         || |||||||||||||||||||||||||||||||||||||||||    
T  15348816 aaaagagcttttagctctttgcttatagcttataagctcgtttgataaaaaaaactatgtttggtaacactttttcaccatgagcttatagcttattt 15348913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 25601978 - 25602075
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||||       ||||||||||||| |||||||| ||||||| ||||||||||||||    
T  25601978 aaaagagcttttagctcttagcttataggttataagctcgtttgacaaaaaaagctctgtttggtatcacttttttaccatgaccttatagcttattt 25602075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 46369809 - 46369896
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnng--ctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  46369809 agcttttagcttatagcttataagctcgtttgacaaaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttattt 46369896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 30774056 - 30774170
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || |||| |||| ||||||||||||||| ||||||||||||||| ||||||||        |||||||||||||||||||||||||    
T  30774056 gggtctgtttggttaacccaa-aaaagagcttttagcttttaacttatagcttataagttcgtttga----taaagctctgtttggtaacactttttcac 30774150  T
Q  197 catgagcttatagcttattt 216  Q
    ||| || |||||||||||||    
T  30774151 cataagtttatagcttattt 30774170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 34086970 - 34087055
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||||||||||||||||||||| ||||       |||||||||||||| ||||||||||||||||||||||||| ||||    
T  34086970 agcttatagcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagctaattt 34087055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 29374327 - 29374419
Alignment:
Q  124 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| |||||| |||||| ||||||||||||||||||||        |||||||||||||| ||||||| ||||||||||||||||||||||    
T  29374327 agcttatagcttatagcttttagcttataagctcgtttgataaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttattt 29374419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 9169048 - 9169149
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||| |||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||    
T  9169048 gggtctgtttggttaaccccaaaaaagagcttttaacttttagcttatagcttataagttcgtttgaaaaaaaaagctctgtttggtaacactttttcac 9169147  T
Q  197 ca 198  Q
    ||    
T  9169148 ca 9169149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 39583100 - 39583185
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||| | |||||||         ||||||||||||||||||||||||||||||||||| |||||||    
T  39583100 agcttttagcttatagcttataagtttgtttgacaaaaaaaattctgtttggtaacactttttcaccatgagcttataacttattt 39583185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 37672439 - 37672396
Alignment:
Q  173 ctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37672439 ctctgtttggtaacactttttcaccatgagcttatagcttattt 37672396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 37703716 - 37703759
Alignment:
Q  173 ctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37703716 ctctgtttggtaacactttttcaccatgagcttatagcttattt 37703759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 28429076 - 28429118
Alignment:
Q  174 tctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28429076 tctgtttggtaacactttttcaccatgagcttatagcttattt 28429118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 50171462 - 50171343
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||||||    | |||| ||||||| |||||||  |||||||||||||||| |||||||         ||||||||||||||| |||| ||    
T  50171462 gggtctgtttgggaaactttaaaaaaaagcttttcgcttttaatttatagcttataagcttgtttgacaaaaaaaattctgtttggtaacacctttttac 50171363  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  50171362 catgagcttatagcttattt 50171343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 8221397 - 8221281
Alignment:
Q  100 tctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccat 199  Q
    ||||||||| ||| |||||||  |||||| |||||| ||||  ||||||||||||||||| ||||       |||||||||||||||  ||||| || |     
T  8221397 tctgtttggtaaagccaagaagctagcttatagcttatagcggatagcttataagctcgtctgacaaaaaaagctctgtttggtaacggttttttacaac 8221298  T
Q  200 gagcttatagcttattt 216  Q
    |||||||||||||||||    
T  8221297 gagcttatagcttattt 8221281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 22099758 - 22099688
Alignment:
Q  92 atatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttga 163  Q
    |||| ||||||||||||||||   || |||| ||||||||| ||||||||||||||||||||||||||||||    
T  22099758 atatagggtctgtttgggaaactaaaaaaaagagcttttag-ttttagcttatagcttataagctcgtttga 22099688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 7024813 - 7024924
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| || ||| | |||| ||||||||||| ||||| ||||||||||||| |||||||||         ||| |||| ||||| ||||||||    
T  7024813 gggtctgtttggtaacacctaaaaaagagcttttagctcttagcatatagcttataagttcgtttgacaaaaaaaattctatttgataacattttttcac 7024912  T
Q  197 catgagcttata 208  Q
    ||||||||||||    
T  7024913 catgagcttata 7024924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 22098965 - 22099007
Alignment:
Q  174 tctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  22098965 tctgtttggtaacattttttcaccatgagcttatagcttattt 22099007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 36043465 - 36043346
Alignment:
Q  98 ggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngct-ctgtttggtaacactttttcac 196  Q
    ||||||||||| || ||| | |||| ||||| ||||| |||||||||||| |||||| |||||||||         | ||||||||||||| ||||||||    
T  36043465 ggtctgtttggtaacacccaaaaaagagcttatagctcttagcttatagcatataagttcgtttgacaaaaaaaaattctgtttggtaacagtttttcac 36043366  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||| ||||||    
T  36043365 catgagcttatagtttattt 36043346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 49185273 - 49185231
Alignment:
Q  174 tctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  49185273 tctgtttggtaacactttttcaccataagcttatagcttattt 49185231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 51423128 - 51423030
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| |||||||| |||||||||||||||||||||| | ||||||         | |||||||| ||||||||||||||||||| ||||||||||||||    
T  51423128 aaaagagcttttaacttttagcttatagcttataagtttgtttgataaaaaaaagttctgtttgataacactttttcaccatgaacttatagcttattt 51423030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 34318415 - 34318496
Alignment:
Q  136 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttt 217  Q
    ||||||||||||||||||||| ||| |||       ||||||||||||||   |||||||||| ||||||||||||||||||    
T  34318415 ttagcttatagcttataagcttgttcgacaaaaaaagctctgtttggtaatggtttttcaccacgagcttatagcttatttt 34318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 43727074 - 43727110
Alignment:
Q  180 tggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||||||||||||||    
T  43727074 tggtaacactttttcaccatgagcttatagcttattt 43727110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 50540768 - 50540861
Alignment:
Q  123 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||| || ||| ||||||||||||||||| |||||||||        | |||||||||||| ||||||||||||| | ||||||||||||||    
T  50540768 tagcttataacttatagcttatagcttataaactcgtttgataaaaaaagttctgtttggtaatactttttcaccataaacttatagcttattt 50540861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 9770058 - 9770019
Alignment:
Q  177 gtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  9770058 gtttgataacactttttcaccatgagcttatagcttattt 9770019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 30495282 - 30495241
Alignment:
Q  175 ctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  30495282 ctgtttggtaatactttttgaccatgagcttatagcttattt 30495241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 42614222 - 42614181
Alignment:
Q  175 ctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||| ||||||||||||||||| ||||||||||    
T  42614222 ctgtttggtaacattttttcaccatgagcttctagcttattt 42614181  T

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Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 49240405 - 49240327
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||| |||| ||||       ||||||||||||||  ||||||||| |||| ||||||||||||||    
T  49240405 agcttatagcttataagttcgtatgacaaaaaaagctctgtttggtaatgctttttcactatgaacttatagcttattt 49240327  T

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Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 3391165 - 3391209
Alignment:
Q  172 gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||    
T  3391165 gctctgtttggtaatactttttcaccatgaacttatagtttattt 3391209  T

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Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 7781295 - 7781210
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| |||||||||||||||||||||||||||        |||||||||||||     ||||||||| |||||||||||||||||    
T  7781295 agcttatagcttatagcttataagctcgtttgataaaaaaagctctgtttggtactgtcttttcaccacgagcttatagcttattt 7781210  T

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Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 13420422 - 13420484
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgt 159  Q
    |||||||||||| |||||||| | | |||||| |||||| ||||  |||||||||||||||||    
T  13420422 gggtctgtttggcaaaaccaaaacattagcttatagcttatagcggatagcttataagctcgt 13420484  T

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Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 40719490 - 40719535
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgac 164  Q
    |||| ||||||||||||| || |||||| |||||||||||||||||    
T  40719490 aaaagagcttttagctttgagtttatagtttataagctcgtttgac 40719535  T

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Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 49822242 - 49822213
Alignment:
Q  187 actttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||    
T  49822242 actttttcaccatgagcttatagcttattt 49822213  T

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Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 52071292 - 52071222
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttata 208  Q
    |||||||||||||||||||| ||||||       ||||||||||||||   |||||||||| |||||||||    
T  52071292 agcttatagcttataagctcatttgacaaaaaaagctctgtttggtaatggtttttcaccacgagcttata 52071222  T

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Target: scaffold0031 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 126944 - 126821
Alignment:
Q  92 atatcgggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttt 191  Q
    |||| ||||||||||||  || ||||||||  |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  126944 atatagggtctgtttggttaacccaagaaag-agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttt 126846  T
Q  192 ttcaccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||||||    
T  126845 ttcaccatgagcttatagcttattt 126821  T

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Target: scaffold0116 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 22561 - 22680
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    ||||||||||||  || || | |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  22561 gggtctgtttggttaacccgaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 22660  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  22661 catgagcttatagcttattt 22680  T

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Target: scaffold0027 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 208
Target Start/End: Complemental strand, 41924 - 41814
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  41924 gggtctgtttgggaaa-ccaaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcac 41826  T
Q  197 catgagcttata 208  Q
    ||||||||||||    
T  41825 catgagcttata 41814  T

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Target: scaffold1632 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1632
Description:

Target: scaffold1632; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 217 - 98
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| |||  ||| |||| ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| ||    
T  217 gggtctgtttggtaaactcaaaaaaagagcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgac 118  T
Q  197 catgagcttatagcttattt 216  Q
    ||||||||||||||||||||    
T  117 catgagcttatagcttattt 98  T

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Target: scaffold0197 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 28265 - 28148
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcac 196  Q
    |||||||||||| || ||  | |||| ||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||    
T  28265 gggtctgtttggtaacactcaaaaaagagcttttagctcttagcttatagcttataagctcgtttgacaaaaaaagctctgtttgataacactttttcac 28166  T
Q  197 catgagcttatagcttat 214  Q
    ||||||||||||||||||    
T  28165 catgagcttatagcttat 28148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 30323 - 30238
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||| |||||| |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  30323 agcttttagtttatagtttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttattt 30238  T

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Target: scaffold0075 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 27315 - 27195
Alignment:
Q  97 gggtctgtttgggaaaaccaagaaaatagcttttagcttttagcttatagcttataagctcgtttgac-nnnnnnngctctgtttggtaacactttttca 195  Q
    ||||||||||||  || || | |||| |||||||||||||||||||||||||||||||||||||||||        ||| ||||||||||||||||||||    
T  27315 gggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttataagctcgtttgacaaaataaagctatgtttggtaacactttttca 27216  T
Q  196 ccatgagcttatagcttattt 216  Q
    |||||||||||||||||||||    
T  27215 ccatgagcttatagcttattt 27195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 7045 - 7142
Alignment:
Q  119 aaaatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||| ||||||||| |||||||||||||||| |||| |||||||||       | |||||||||||||||||||| ||||||||||||||||||||||    
T  7045 aaaagagcttttagtttttagcttatagcttttaagttcgtttgacaaaaaaagttctgtttggtaacacttttttaccatgagcttatagcttattt 7142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 192013 - 192098
Alignment:
Q  131 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||||||||||||||||||||| ||||       |||||||||||||| ||||||||||||||||||||||||||||||    
T  192013 agcttatagcttatagcttataagctcgtatgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttattt 192098  T

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Target: scaffold0002 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 431265 - 431343
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| ||||||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  431265 agcttttagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattt 431343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 63851 - 63929
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    |||||||||||  ||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||    
T  63851 agcttatagctcttaagctcgtttgacaaaaaaagatctgtttggtaacactttttcaccatgagcttatagcttattt 63929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 36347 - 36388
Alignment:
Q  123 tagcttttagcttttagcttatagcttataagctcgtttgac 164  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36347 tagcttttagcttttagcttatagcttataagctcgtttgac 36388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 53126 - 53082
Alignment:
Q  172 gctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  53126 gctctgtttggtaacactttttcaccatgagcttatagcctattt 53082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 93525 - 93447
Alignment:
Q  138 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 216  Q
    ||||| |||||||||||||||||||||       |||||||||| |||||||||   ||||||||||||||||||||||    
T  93525 agcttttagcttataagctcgtttgacaaaaaaagctctgtttgataacactttaaaaccatgagcttatagcttattt 93447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 5451 - 5486
Alignment:
Q  173 ctctgtttggtaacactttttcaccatgagcttata 208  Q
    ||||||||||||||||||||| ||||||||||||||    
T  5451 ctctgtttggtaacacttttttaccatgagcttata 5486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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