View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3697_low_30 (Length: 212)
Name: NF3697_low_30
Description: NF3697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3697_low_30 |
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Alignment Details
Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 36875362 - 36875560
Alignment:
| Q |
1 |
tcagctttgactcaaattcctttgatattacatgctgctatctacattgattgtacctcaccttctgaataatctcatatacttccttcattacactacc |
100 |
Q |
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| T |
36875362 |
tcagctttgactcaaattcctttgatattacatgctgctatctacattgattgtacctcaccttctgaataatctcatatacttccttcattacactacc |
36875461 |
T |
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| Q |
101 |
atggttatcttcgccttttaaagaacaggtnnnnnnnnnccattgttgcctttctatc---tcagcaggaccacaaaacatacaaagtgacaaaaaactt |
197 |
Q |
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| T |
36875462 |
atggttatctttgccttttggaaaaaa--------aaaaccattgttgcctttctatctgatcagcaggaccacaaaacatacaaagtgacaaaaaactt |
36875553 |
T |
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