View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3700_high_9 (Length: 230)
Name: NF3700_high_9
Description: NF3700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3700_high_9 |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 31785950 - 31786161
Alignment:
| Q |
1 |
gggtaattgtgtgtggcagtttcatccctcaagatgttgcaatcaagataaaaaagaaaacaaatcgaagagttgagatattggacatacaagatttgag |
100 |
Q |
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| T |
31785950 |
gggtaattgtgtgtggcagtttcatccctcaagatgttgcaatcaagataaaaaagaaaacaaatcgaagagttgagatattggacatacaagatttgag |
31786049 |
T |
|
| Q |
101 |
tgaaaacaatgctgaaaatatagaagaacagaaaccaagcactagcccccaaaagccaattgaaagaaatatgtttggattgatagaaacaaagagagaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31786050 |
tgaaaacaatgctgaaaatatagaagaacagaaaccaagcactagcccccaaaagccaattgaaagaaatatgtttggattgatagaaacaaagagagaa |
31786149 |
T |
|
| Q |
201 |
atgcctgccctc |
212 |
Q |
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|||||||||||| |
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| T |
31786150 |
atgcctgccctc |
31786161 |
T |
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