View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3701_high_3 (Length: 660)

Name: NF3701_high_3
Description: NF3701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3701_high_3
NF3701_high_3
[»] chr7 (67 HSPs)
chr7 (161-640)||(3988808-3989289)
chr7 (15-163)||(9412021-9412169)
chr7 (14-161)||(3687353-3687502)
chr7 (14-159)||(29291808-29291953)
chr7 (15-158)||(27096250-27096392)
chr7 (15-158)||(27181911-27182053)
chr7 (497-631)||(3984013-3984147)
chr7 (14-135)||(5349489-5349607)
chr7 (14-162)||(23686626-23686772)
chr7 (27-162)||(6908212-6908346)
chr7 (14-94)||(15567056-15567136)
chr7 (71-162)||(9412289-9412380)
chr7 (15-90)||(13772683-13772758)
chr7 (14-161)||(38191468-38191619)
chr7 (16-88)||(35080023-35080094)
chr7 (71-161)||(3687621-3687710)
chr7 (27-89)||(18925128-18925190)
chr7 (15-92)||(33628596-33628674)
chr7 (14-80)||(34235759-34235825)
chr7 (104-161)||(13772898-13772955)
chr7 (104-160)||(8953886-8953941)
chr7 (31-93)||(5735471-5735533)
chr7 (71-163)||(44600099-44600191)
chr7 (107-163)||(3205093-3205149)
chr7 (107-163)||(17156965-17157021)
chr7 (107-163)||(20419324-20419380)
chr7 (107-163)||(22740154-22740210)
chr7 (107-162)||(13772640-13772695)
chr7 (107-162)||(33628660-33628715)
chr7 (71-161)||(44599489-44599579)
chr7 (104-161)||(29292038-29292095)
chr7 (106-159)||(34235977-34236030)
chr7 (107-161)||(5349733-5349784)
chr7 (107-163)||(13744233-13744288)
chr7 (71-162)||(13863312-13863403)
chr7 (107-163)||(37972396-37972452)
chr7 (107-162)||(10533033-10533088)
chr7 (107-158)||(18863970-18864021)
chr7 (107-162)||(37889259-37889314)
chr7 (110-160)||(5735253-5735303)
chr7 (107-161)||(9035293-9035347)
chr7 (107-160)||(18925322-18925373)
chr7 (107-161)||(37888833-37888887)
chr7 (109-163)||(38826915-38826969)
chr7 (106-160)||(39983700-39983754)
chr7 (107-161)||(48359320-48359373)
chr7 (113-158)||(5735553-5735598)
chr7 (23-64)||(8953817-8953858)
chr7 (71-163)||(13863921-13864012)
chr7 (108-161)||(23686421-23686473)
chr7 (108-161)||(35079960-35080012)
chr7 (107-148)||(35080223-35080263)
chr7 (71-162)||(8643730-8643821)
chr7 (106-162)||(9034866-9034922)
chr7 (109-161)||(18925062-18925114)
chr7 (111-163)||(29292920-29292972)
chr7 (111-163)||(38191260-38191312)
chr7 (107-158)||(20418891-20418942)
chr7 (107-158)||(22740591-22740641)
chr7 (113-164)||(42418588-42418639)
chr7 (107-162)||(46816311-46816366)
chr7 (108-158)||(6908485-6908534)
chr7 (107-163)||(16198977-16199033)
chr7 (113-161)||(27096047-27096094)
chr7 (113-161)||(27182209-27182256)
chr7 (107-163)||(30857904-30857960)
chr7 (107-163)||(36527382-36527437)
[»] chr5 (47 HSPs)
chr5 (15-162)||(25175059-25175206)
chr5 (15-162)||(25115967-25116116)
chr5 (15-163)||(18433225-18433372)
chr5 (34-162)||(22428933-22429058)
chr5 (27-161)||(34577085-34577217)
chr5 (14-161)||(9665735-9665879)
chr5 (14-90)||(5779632-5779708)
chr5 (14-89)||(12441084-12441159)
chr5 (15-135)||(26020659-26020780)
chr5 (17-162)||(5187735-5187885)
chr5 (71-161)||(18433015-18433105)
chr5 (28-158)||(41382896-41383022)
chr5 (14-161)||(23011079-23011227)
chr5 (14-163)||(9869558-9869705)
chr5 (71-163)||(26020448-26020540)
chr5 (71-162)||(25115756-25115847)
chr5 (71-162)||(25174848-25174939)
chr5 (107-163)||(19514963-19515019)
chr5 (111-162)||(16466746-16466797)
chr5 (71-161)||(18817575-18817665)
chr5 (107-162)||(22429196-22429250)
chr5 (108-158)||(23011383-23011432)
chr5 (104-162)||(33324835-33324893)
chr5 (109-158)||(31569910-31569958)
chr5 (107-163)||(41383167-41383222)
chr5 (107-162)||(12498566-12498621)
chr5 (107-162)||(12498928-12498983)
chr5 (107-162)||(18816951-18817006)
chr5 (107-162)||(26570728-26570783)
chr5 (107-162)||(26571164-26571219)
chr5 (109-163)||(34147512-34147566)
chr5 (109-162)||(43464194-43464246)
chr5 (107-158)||(9665560-9665609)
chr5 (109-161)||(37780744-37780796)
chr5 (107-158)||(11351427-11351478)
chr5 (115-161)||(12441320-12441364)
chr5 (104-155)||(16726084-16726135)
chr5 (107-158)||(21207229-21207280)
chr5 (110-161)||(22729008-22729058)
chr5 (107-158)||(34576870-34576920)
chr5 (71-163)||(11350806-11350897)
chr5 (107-160)||(22729440-22729492)
chr5 (111-160)||(25941018-25941067)
chr5 (109-161)||(12441042-12441093)
chr5 (107-163)||(37610200-37610255)
chr5 (107-163)||(37780318-37780373)
chr5 (107-163)||(43463754-43463809)
[»] chr6 (36 HSPs)
chr6 (15-163)||(18241852-18242000)
chr6 (14-162)||(21032186-21032335)
chr6 (15-161)||(11656690-11656836)
chr6 (27-161)||(33971994-33972126)
chr6 (27-162)||(10039675-10039808)
chr6 (18-163)||(23250590-23250734)
chr6 (14-90)||(31598043-31598119)
chr6 (71-162)||(3403953-3404044)
chr6 (14-90)||(31598527-31598603)
chr6 (34-161)||(30388062-30388187)
chr6 (15-92)||(3403757-3403834)
chr6 (28-93)||(33658661-33658726)
chr6 (71-163)||(21031977-21032068)
chr6 (107-161)||(3403717-3403771)
chr6 (107-164)||(7654548-7654605)
chr6 (104-156)||(12714436-12714488)
chr6 (111-163)||(31598732-31598783)
chr6 (71-162)||(33829600-33829691)
chr6 (15-70)||(2762696-2762751)
chr6 (71-161)||(33828990-33829080)
chr6 (104-158)||(3825530-3825583)
chr6 (104-162)||(13579648-13579705)
chr6 (105-158)||(30388360-30388413)
chr6 (106-163)||(33655114-33655170)
chr6 (107-163)||(2354810-2354866)
chr6 (71-161)||(18242120-18242210)
chr6 (108-163)||(31598274-31598328)
chr6 (104-156)||(2762611-2762664)
chr6 (104-156)||(10039840-10039893)
chr6 (105-156)||(11656608-11656660)
chr6 (104-154)||(21032107-21032158)
chr6 (109-160)||(22755091-22755142)
chr6 (114-163)||(2762782-2762829)
chr6 (107-161)||(10087858-10087912)
chr6 (107-161)||(33974299-33974353)
chr6 (108-156)||(18242033-18242082)
[»] chr3 (55 HSPs)
chr3 (15-163)||(20968716-20968864)
chr3 (15-161)||(10293817-10293963)
chr3 (473-617)||(3863993-3864132)
chr3 (15-161)||(18875099-18875245)
chr3 (14-162)||(47870822-47870967)
chr3 (29-161)||(17372298-17372429)
chr3 (15-158)||(3644538-3644678)
chr3 (13-154)||(26540775-26540915)
chr3 (28-94)||(13657513-13657579)
chr3 (18-161)||(42627457-42627599)
chr3 (14-161)||(45060596-45060742)
chr3 (15-161)||(9026942-9027086)
chr3 (16-158)||(14015697-14015839)
chr3 (14-163)||(17440970-17441119)
chr3 (23-89)||(1100983-1101049)
chr3 (106-163)||(47871121-47871177)
chr3 (71-161)||(10293608-10293698)
chr3 (107-161)||(20969019-20969073)
chr3 (107-163)||(53687886-53687942)
chr3 (107-162)||(40848961-40849016)
chr3 (107-161)||(3644783-3644837)
chr3 (108-162)||(18874881-18874935)
chr3 (108-162)||(45060872-45060926)
chr3 (108-157)||(4947263-4947312)
chr3 (108-161)||(8314013-8314066)
chr3 (107-158)||(27238900-27238951)
chr3 (107-162)||(36180990-36181045)
chr3 (107-162)||(48159896-48159951)
chr3 (107-161)||(3353128-3353181)
chr3 (108-162)||(8315083-8315136)
chr3 (112-162)||(42455789-42455839)
chr3 (107-161)||(42673296-42673349)
chr3 (108-161)||(1927772-1927825)
chr3 (107-158)||(3644720-3644772)
chr3 (18-94)||(4947470-4947545)
chr3 (107-163)||(26007180-26007235)
chr3 (104-158)||(1101087-1101141)
chr3 (107-158)||(9026739-9026789)
chr3 (107-158)||(14015964-14016014)
chr3 (107-158)||(23630035-23630086)
chr3 (108-163)||(53766580-53766635)
chr3 (108-162)||(1101182-1101236)
chr3 (107-160)||(17372594-17372645)
chr3 (107-161)||(21896511-21896564)
chr3 (104-158)||(26540694-26540747)
chr3 (107-161)||(42672978-42673031)
chr3 (107-161)||(47666335-47666389)
chr3 (107-161)||(48160333-48160387)
chr3 (104-156)||(4947386-4947439)
chr3 (108-156)||(10293735-10293784)
chr3 (109-162)||(47665910-47665963)
chr3 (109-156)||(18875017-18875065)
chr3 (107-162)||(21895656-21895712)
chr3 (108-160)||(22429159-22429211)
chr3 (107-163)||(40848519-40848574)
[»] scaffold0110 (2 HSPs)
scaffold0110 (15-163)||(45535-45682)
scaffold0110 (71-162)||(45771-45861)
[»] chr8 (58 HSPs)
chr8 (14-162)||(15155882-15156030)
chr8 (15-161)||(12281334-12281480)
chr8 (15-161)||(34313765-34313908)
chr8 (15-161)||(37752325-37752470)
chr8 (13-139)||(9465780-9465906)
chr8 (14-163)||(18019996-18020142)
chr8 (13-161)||(43162234-43162383)
chr8 (15-161)||(16929151-16929296)
chr8 (37-167)||(43246105-43246236)
chr8 (23-128)||(765951-766054)
chr8 (14-154)||(7127660-7127796)
chr8 (15-163)||(41662105-41662247)
chr8 (28-159)||(74688-74816)
chr8 (24-162)||(33747983-33748120)
chr8 (17-161)||(23123338-23123484)
chr8 (14-94)||(22787020-22787099)
chr8 (15-158)||(37669958-37670099)
chr8 (13-154)||(9930744-9930885)
chr8 (71-161)||(15156149-15156239)
chr8 (71-161)||(41662367-41662457)
chr8 (71-161)||(43245871-43245961)
chr8 (71-159)||(765736-765824)
chr8 (71-163)||(12281122-12281214)
chr8 (104-162)||(16928941-16928999)
chr8 (71-167)||(9823325-9823421)
chr8 (14-93)||(3463707-3463786)
chr8 (71-161)||(3463909-3463999)
chr8 (107-161)||(22851390-22851444)
chr8 (107-161)||(37752084-37752138)
chr8 (29-93)||(11007750-11007814)
chr8 (107-162)||(13937389-13937444)
chr8 (71-161)||(39724012-39724102)
chr8 (107-161)||(9822748-9822802)
chr8 (109-162)||(13026634-13026687)
chr8 (71-163)||(13936721-13936812)
chr8 (104-157)||(43162536-43162588)
chr8 (71-158)||(13027245-13027332)
chr8 (15-90)||(43598658-43598735)
chr8 (104-159)||(23123514-23123567)
chr8 (107-162)||(34498555-34498610)
chr8 (104-167)||(37670253-37670314)
chr8 (111-161)||(3307338-3307388)
chr8 (121-162)||(767720-767760)
chr8 (104-140)||(74981-75017)
chr8 (111-163)||(6092775-6092825)
chr8 (107-159)||(25438794-25438846)
chr8 (107-158)||(34498125-34498176)
chr8 (107-162)||(37396707-37396762)
chr8 (109-163)||(17431285-17431339)
chr8 (107-161)||(37397145-37397199)
chr8 (109-163)||(41662519-41662573)
chr8 (114-163)||(9465605-9465653)
chr8 (104-156)||(18019915-18019968)
chr8 (109-158)||(22786843-22786892)
chr8 (110-171)||(33727108-33727169)
chr8 (107-167)||(20861638-20861698)
chr8 (107-163)||(24473768-24473824)
chr8 (107-163)||(25439126-25439181)
[»] chr4 (60 HSPs)
chr4 (15-163)||(13198814-13198962)
chr4 (14-161)||(3930179-3930325)
chr4 (15-161)||(11241389-11241534)
chr4 (15-163)||(35393685-35393831)
chr4 (15-162)||(16555514-16555661)
chr4 (15-161)||(27304718-27304862)
chr4 (15-157)||(49178724-49178866)
chr4 (15-139)||(39415246-39415371)
chr4 (14-162)||(22681788-22681934)
chr4 (27-160)||(8488403-8488534)
chr4 (28-94)||(3844404-3844470)
chr4 (29-163)||(8182092-8182229)
chr4 (15-92)||(5206028-5206105)
chr4 (71-162)||(3930444-3930534)
chr4 (14-89)||(7603186-7603261)
chr4 (71-161)||(16555781-16555871)
chr4 (15-163)||(54508813-54508964)
chr4 (107-167)||(9023680-9023740)
chr4 (72-163)||(18077167-18077258)
chr4 (107-163)||(24775783-24775839)
chr4 (107-162)||(56505692-56505747)
chr4 (104-160)||(22681576-22681631)
chr4 (107-175)||(36095803-36095871)
chr4 (71-162)||(50678778-50678869)
chr4 (107-162)||(5205987-5206042)
chr4 (38-92)||(24775742-24775797)
chr4 (107-162)||(39744465-39744520)
chr4 (104-158)||(13198606-13198660)
chr4 (108-161)||(5206231-5206283)
chr4 (104-160)||(7603146-7603200)
chr4 (107-164)||(28196773-28196830)
chr4 (109-158)||(47219203-47219252)
chr4 (107-163)||(293217-293273)
chr4 (71-158)||(36096439-36096526)
chr4 (111-163)||(39415528-39415580)
chr4 (71-162)||(45830160-45830251)
chr4 (107-162)||(28196345-28196400)
chr4 (71-161)||(50679388-50679478)
chr4 (107-161)||(169439-169493)
chr4 (107-161)||(32703650-32703704)
chr4 (104-160)||(8181992-8182049)
chr4 (108-161)||(23540253-23540306)
chr4 (107-160)||(25161879-25161932)
chr4 (104-156)||(27304890-27304943)
chr4 (71-163)||(43051216-43051308)
chr4 (107-163)||(8488186-8488242)
chr4 (110-162)||(9380744-9380796)
chr4 (107-163)||(26207746-26207802)
chr4 (107-163)||(32703223-32703279)
chr4 (107-162)||(9023243-9023298)
chr4 (107-162)||(11241661-11241715)
chr4 (107-161)||(4239366-4239420)
chr4 (107-161)||(9380307-9380361)
chr4 (107-163)||(169011-169068)
chr4 (107-160)||(11529169-11529222)
chr4 (114-163)||(39912052-39912101)
chr4 (107-160)||(43292038-43292091)
chr4 (109-156)||(16555695-16555743)
chr4 (107-163)||(26207359-26207414)
chr4 (107-163)||(43050605-43050661)
[»] chr1 (57 HSPs)
chr1 (15-162)||(17518302-17518448)
chr1 (15-162)||(47955516-47955663)
chr1 (15-158)||(8108724-8108866)
chr1 (15-162)||(41083118-41083265)
chr1 (18-162)||(31848105-31848247)
chr1 (27-163)||(22149401-22149534)
chr1 (71-163)||(47955304-47955396)
chr1 (29-93)||(1176934-1176998)
chr1 (104-163)||(13589656-13589714)
chr1 (107-163)||(8108993-8109049)
chr1 (107-163)||(39692000-39692056)
chr1 (15-94)||(46057102-46057182)
chr1 (109-163)||(22149701-22149755)
chr1 (71-163)||(49284407-49284499)
chr1 (68-158)||(1176839-1176930)
chr1 (71-161)||(6002237-6002327)
chr1 (104-159)||(17518599-17518653)
chr1 (107-161)||(48190771-48190825)
chr1 (107-163)||(20480166-20480221)
chr1 (550-617)||(479444-479511)
chr1 (107-162)||(26815119-26815174)
chr1 (107-158)||(28634157-28634208)
chr1 (107-162)||(32163043-32163098)
chr1 (107-162)||(44911024-44911079)
chr1 (107-162)||(48191355-48191410)
chr1 (112-163)||(50615238-50615289)
chr1 (112-163)||(50623066-50623117)
chr1 (107-161)||(9347126-9347180)
chr1 (107-161)||(26814694-26814748)
chr1 (109-163)||(50429654-50429708)
chr1 (107-161)||(50615621-50615674)
chr1 (107-161)||(50623449-50623502)
chr1 (105-158)||(1177016-1177069)
chr1 (104-161)||(41082909-41082966)
chr1 (107-163)||(48104676-48104732)
chr1 (107-163)||(48313792-48313848)
chr1 (107-162)||(19008750-19008805)
chr1 (106-161)||(20371352-20371406)
chr1 (107-158)||(50430081-50430132)
chr1 (111-161)||(1176717-1176766)
chr1 (107-165)||(4692433-4692491)
chr1 (107-161)||(21687025-21687079)
chr1 (107-161)||(27172116-27172169)
chr1 (107-161)||(48105116-48105170)
chr1 (108-161)||(20480613-20480665)
chr1 (109-170)||(42611176-42611237)
chr1 (109-158)||(42611616-42611665)
chr1 (107-160)||(47498495-47498547)
chr1 (111-163)||(999110-999161)
chr1 (107-159)||(6002894-6002946)
chr1 (111-163)||(27172545-27172597)
chr1 (111-163)||(31847893-31847945)
chr1 (111-158)||(31848019-31848067)
chr1 (107-163)||(33085669-33085725)
chr1 (109-160)||(46056904-46056953)
chr1 (110-158)||(46823846-46823894)
chr1 (107-159)||(50526472-50526524)
[»] chr2 (56 HSPs)
chr2 (15-161)||(30191133-30191279)
chr2 (14-162)||(20347162-20347309)
chr2 (15-161)||(11883834-11883980)
chr2 (15-161)||(32672842-32672988)
chr2 (15-161)||(6171156-6171301)
chr2 (15-162)||(17345943-17346089)
chr2 (15-161)||(40469427-40469573)
chr2 (34-163)||(26737480-26737606)
chr2 (29-163)||(43495307-43495439)
chr2 (48-158)||(15920781-15920890)
chr2 (31-163)||(6495646-6495777)
chr2 (28-94)||(15321610-15321676)
chr2 (71-163)||(24832329-24832421)
chr2 (71-175)||(30190909-30191013)
chr2 (104-163)||(11883621-11883680)
chr2 (13-161)||(40221313-40221459)
chr2 (28-92)||(18055265-18055330)
chr2 (71-163)||(20347428-20347520)
chr2 (71-163)||(40469693-40469785)
chr2 (107-167)||(18296693-18296753)
chr2 (109-162)||(29230281-29230334)
chr2 (71-162)||(2639446-2639537)
chr2 (107-163)||(6171456-6171512)
chr2 (107-163)||(8851582-8851638)
chr2 (71-162)||(26841586-26841677)
chr2 (107-158)||(18055316-18055367)
chr2 (71-159)||(15321394-15321480)
chr2 (107-161)||(26737781-26737835)
chr2 (71-163)||(2638818-2638910)
chr2 (109-158)||(29343584-29343633)
chr2 (71-163)||(32673107-32673198)
chr2 (108-160)||(6495468-6495519)
chr2 (107-163)||(26692394-26692450)
chr2 (107-163)||(37720202-37720258)
chr2 (107-162)||(5378660-5378715)
chr2 (107-162)||(7664247-7664302)
chr2 (104-159)||(18055050-18055103)
chr2 (107-158)||(26692820-26692871)
chr2 (71-161)||(26842202-26842292)
chr2 (107-162)||(41790912-41790967)
chr2 (104-158)||(43495481-43495535)
chr2 (107-161)||(7664673-7664727)
chr2 (107-161)||(17850978-17851032)
chr2 (71-160)||(18296077-18296166)
chr2 (107-164)||(7980003-7980059)
chr2 (71-158)||(7591204-7591291)
chr2 (107-163)||(8851146-8851202)
chr2 (107-162)||(5379959-5380014)
chr2 (104-158)||(17345736-17345788)
chr2 (107-161)||(7591850-7591904)
chr2 (71-161)||(43495570-43495658)
chr2 (108-156)||(6171334-6171383)
chr2 (104-156)||(17345859-17345912)
chr2 (107-160)||(18750126-18750178)
chr2 (108-156)||(26737657-26737706)
chr2 (109-156)||(40469607-40469655)
[»] scaffold0802 (2 HSPs)
scaffold0802 (15-161)||(1118-1264)
scaffold0802 (71-161)||(1384-1474)
[»] scaffold0319 (2 HSPs)
scaffold0319 (27-163)||(6392-6529)
scaffold0319 (71-161)||(6661-6750)
[»] scaffold1221 (2 HSPs)
scaffold1221 (18-158)||(1694-1834)
scaffold1221 (107-161)||(1511-1564)
[»] scaffold0598 (1 HSPs)
scaffold0598 (14-159)||(6609-6751)
[»] scaffold0015 (2 HSPs)
scaffold0015 (15-161)||(17063-17209)
scaffold0015 (104-161)||(16853-16908)
[»] scaffold0001 (4 HSPs)
scaffold0001 (15-158)||(183367-183509)
scaffold0001 (27-162)||(439121-439254)
scaffold0001 (72-161)||(438930-439019)
scaffold0001 (104-163)||(183660-183718)
[»] scaffold0009 (1 HSPs)
scaffold0009 (14-163)||(205685-205831)
[»] scaffold0192 (2 HSPs)
scaffold0192 (15-94)||(25134-25213)
scaffold0192 (71-163)||(25333-25425)
[»] scaffold0433 (1 HSPs)
scaffold0433 (28-94)||(10690-10756)
[»] scaffold0376 (3 HSPs)
scaffold0376 (18-92)||(7494-7568)
scaffold0376 (107-164)||(7452-7508)
scaffold0376 (104-161)||(7597-7653)
[»] scaffold0328 (2 HSPs)
scaffold0328 (71-161)||(6152-6242)
scaffold0328 (71-161)||(6759-6849)
[»] scaffold0002 (1 HSPs)
scaffold0002 (104-161)||(411923-411979)
[»] scaffold0460 (1 HSPs)
scaffold0460 (111-163)||(328-380)
[»] scaffold0035 (1 HSPs)
scaffold0035 (104-160)||(72967-73023)
[»] scaffold0535 (1 HSPs)
scaffold0535 (111-163)||(10010-10062)
[»] scaffold0041 (1 HSPs)
scaffold0041 (107-163)||(38695-38751)
[»] scaffold0176 (1 HSPs)
scaffold0176 (107-162)||(20043-20098)
[»] scaffold0069 (1 HSPs)
scaffold0069 (106-161)||(50506-50560)
[»] scaffold0017 (2 HSPs)
scaffold0017 (107-161)||(185274-185328)
scaffold0017 (107-160)||(184840-184893)
[»] scaffold0029 (1 HSPs)
scaffold0029 (106-163)||(9903-9960)


Alignment Details
Target: chr7 (Bit Score: 432; Significance: 0; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 161 - 640
Target Start/End: Complemental strand, 3989289 - 3988808
Alignment:
Q  161 cttgtttctttgacacaaattaaagaaaaactattagtgaa-gaaagaatggtaattttacgaaattatcatctttaagcattgacatattcaccattat 259  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  3989289 cttgtttctttgacacaaattaaagaaaaactattagtgaaagaaagaatggtaattttacgaaattatcatcgttaagcattggcatattcaccattat 3989190  T
Q  260 catgaatgcaaaaaatataatgatgacttgggaataatgcacataatattagtcagagggttgtagttattttgaaaatgtgacacttattgtaggagag 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3989189 catgaatgcaaaaaatataatgatgacttgggaataatgcacataatattagtcagagggttgtagttattttgaaaatgtgacacttattgtaggagag 3989090  T
Q  360 agag--taagatttagtaaaacattttgccaactaatatttatacctgtatataattaacaatcaaagaatgacgatacatttttataaggcagatgtat 457  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3989089 agagagtaagatttagtaaaacattttgccaactaatatttatacctttatataattaacaatcaaagaatgacgatacatttttataaggcagatgtat 3988990  T
Q  458 tagaattttaccatcaactaattgttgctgtttgtttcattcaattgactcattttgctgctctttgcaaaacctcaaaatgttggcaatgtttcttgta 557  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  3988989 tagaattttaccatcaactaattgttgctgtttgtttcattcaattgactcatgttgctgctctttgcaaaa-ctaaaaatgttggcaatgtttcttgta 3988891  T
Q  558 gcatctaaaattatgttgtcacaggaacttcatggtcggacagtacgagtgaactatgctcaagaaaggccgcgctctgggta 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3988890 gcatctaaaattatgttgtcacaggaacttcatggtcggacagtacgagtgaactatgctcaagaaaggccacgctctgggta 3988808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 9412169 - 9412021
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||         |||||||||||    
T  9412169 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgca 9412070  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9412069 aaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcctt 9412021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 3687502 - 3687353
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc-nnnnnnnnngagggggtg 112  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||          |||||||||    
T  3687502 catcttttgccctttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaaagagggggtg 3687403  T
Q  113 caaaatcgcacaattaacaaaagata-gaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||    
T  3687402 caaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaagcc 3687353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 29291953 - 29291808
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||         ||||||||||    
T  29291953 catcttttgccctctttcccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgtaaaatcgctctaaaaaaaagagggggtgc 29291854  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaag 159  Q
    ||||||||| ||||| |||||||||| | | |||||||||||||||    
T  29291853 aaaatcgcataattatcaaaagatagggagaaaaagtgcaattaag 29291808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 27096250 - 27096392
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||         |||||| ||||    
T  27096250 atcttttgccccccttcccctcttttaatgatgattttgaacaaaacacaattggcaaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgca 27096349  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||    
T  27096350 aaatcacacaattgacaaaagatag-ggggaaaagtgcaattaa 27096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 27182053 - 27181911
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||         |||||| ||||    
T  27182053 atcttttgccccccttcccctcttttaatgatgattttgaacaaaacacaattggcaaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgca 27181954  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||    
T  27181953 aaatcacacaattgacaaaagatag-ggggaaaagtgcaattaa 27181911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 497 - 631
Target Start/End: Complemental strand, 3984147 - 3984013
Alignment:
Q  497 ttcaattgactcattttgctgctctttgcaaaacctcaaaatgttggcaatgtttcttgtagcatctaaaattatgttg----tcacaggaacttcatgg 592  Q
    |||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||| ||||||||    |||||||||||| ||||    
T  3984147 ttcaattgactcattttgctgctctttgcaaaac-tcga--tgttggcaatgtttcttgtagcatctaaa-ttatgttggttgtcacaggaacttgatgg 3984052  T
Q  593 tcggacagtacgagtgaactatgctcaagaaaggccgcg 631  Q
    |||||||||||||||||||||||||  ||||||| ||||    
T  3984051 tcggacagtacgagtgaactatgctacagaaagggcgcg 3984013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 5349607 - 5349489
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||          |||||||||    
T  5349607 catcttttgcccatttccccctcttttaatgatgattttgaacaaaacacggttgacaaaagatggggtgcaaaatcgctcaaaaaaa---agggggtgc 5349511  T
Q  114 aaaatcgcacaattaacaaaag 135  Q
    ||||||||||||||||||||||    
T  5349510 aaaatcgcacaattaacaaaag 5349489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 23686626 - 23686772
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    |||||||  |||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||         ||||||   |    
T  23686626 catctttcacccaattccccctcttttaatgatgattttgaacaaaacacatttggcaaaagatggggtgcaaaatcgctccaaaaaaaagagggg--tc 23686723  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  23686724 aaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcct 23686772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 6908346 - 6908212
Alignment:
Q  27 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaat 126  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||           |  |||||||||||||||||||    
T  6908346 ttttcctctcttttaatgatgattttgaacaaaacacaattggcaaaagatagagtgcaaaatcgctaaaaaaaaaaaaaagggtgcaaaatcgcacaat 6908247  T
Q  127 taacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||| |||||| ||||||||||||||||||||||    
T  6908246 taacaatagatag-ggggaaaagtgcaattaagcct 6908212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 15567136 - 15567056
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc 94  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  15567136 catcttttgcccctttttccctcttttaatgctgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctc 15567056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 9412289 - 9412380
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  9412289 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 9412380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 13772758 - 13772683
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatc 90  Q
    |||||| |||| |||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  13772758 atctttagccccttttcctctattttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatc 13772683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 38191468 - 38191619
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc--nnnnnnnnngagg--gg 109  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||| ||| ||||| || || |||||||||||||           ||||  ||    
T  38191468 catcttttgccccttaccccctcttttaatgatgattttgaacaaaacacaattgacaaaaaataggatgcaaaatcgctcaaaaaaaagaggagggtgg 38191567  T
Q  110 gtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||| |||||||||||||||| ||  |||| ||||||||||||    
T  38191568 gtgcaaaatcgcataattaacaaaagataggggtaaaaaatgcaattaagcc 38191619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 35080094 - 35080023
Alignment:
Q  16 tcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaa 88  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  35080094 tcttttgccccttttcacctcttttaatgatgattttgaac-aaacacaattgtcaaaagatggggtgcaaaa 35080023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 3687621 - 3687710
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||    
T  3687621 aaaagatggggtgcaaaatcgctcaaaaaaaa-gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 3687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 18925190 - 18925128
Alignment:
Q  27 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaat 89  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  18925190 tttttccctcttttaatgatgattttgaacaaaacacaattgacaaaatatggggtgcaaaat 18925128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 33628596 - 33628674
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttg-aacaaaacacagttggcaaaagatggggtgcaaaatcgc 92  Q
    |||||| |||| |||||| |||||||||||||||||||  ||||||| ||| |||||||||||||||||||||||||||    
T  33628596 atctttagccccttttcctctcttttaatgatgattttttaacaaaaaacaattggcaaaagatggggtgcaaaatcgc 33628674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 34235825 - 34235759
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggg 80  Q
    ||||||||||||   |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  34235825 catcttttgcccccattcccctcttttaaagatgattttgaacaaaacacaattggcaaaagatggg 34235759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 13772898 - 13772955
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  13772898 gagggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagcc 13772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 8953886 - 8953941
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  8953886 gagggggtgcaaaattgcacaattaacaaaagatag-ggggaaaagtgcaattaagc 8953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 5735471 - 5735533
Alignment:
Q  31 cccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgct 93  Q
    |||||||||||||||||||||||||||||| ||| ||||||| | ||| ||||||||||||||    
T  5735471 cccctcttttaatgatgattttgaacaaaatacaattggcaagatatgaggtgcaaaatcgct 5735533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 44600099 - 44600191
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || ||||||||||||||||||||    
T  44600099 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctt 44600191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 3205093 - 3205149
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  3205093 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 3205149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 17157021 - 17156965
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  17157021 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 17156965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 20419324 - 20419380
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  20419324 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 20419380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 22740210 - 22740154
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  22740210 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 22740154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 13772695 - 13772640
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||| |||||||| |||||||||| | ||||||||||||||||||||    
T  13772695 ggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagcct 13772640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 33628660 - 33628715
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||||| |||||    
T  33628660 ggggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatttagcct 33628715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 44599579 - 44599489
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || ||||||||||||||||||    
T  44599579 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 29292038 - 29292095
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||| ||||||||||||||| |||||| ||||||  |||||||||||||||||    
T  29292038 gagggggtggaaaatcgcacaattagcaaaagttagaggaaaaaagtgcaattaagcc 29292095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 34235977 - 34236030
Alignment:
Q  106 gggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaag 159  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| | ||||||||    
T  34235977 gggggtgcaaaatcgcacaattagcaaaagatagaagggaaaaatacaattaag 34236030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 5349733 - 5349784
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||    
T  5349733 ggggtgcaaaatcgcacaattaacaaaagata---ggggaaagtgcaattaagcc 5349784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 13744233 - 13744288
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  13744233 ggggtgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaagcctt 13744288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 13863403 - 13863312
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || ||||| |||||||||||||    
T  13863403 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 13863312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 37972396 - 37972452
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||  ||||  |||| |||||||||||||||||||||||    
T  37972396 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctt 37972452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 10533088 - 10533033
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  10533088 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 10533033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 18864021 - 18863970
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||||||||||    
T  18864021 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 37889259 - 37889314
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  37889259 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37889314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 5735303 - 5735253
Alignment:
Q  110 gtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    ||||||||||||||||||| | |||||||| || |||||||||||||||||    
T  5735303 gtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaagc 5735253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 9035293 - 9035347
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  ||||  |||| |||||||||||||||||||||    
T  9035293 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9035347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 18925322 - 18925373
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    |||||||||||||||||||||| ||||| |||||  ||||||||||||||||||    
T  18925322 ggggtgcaaaatcgcacaattagcaaaatataga--ggaaaagtgcaattaagc 18925373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 37888887 - 37888833
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  ||||  |||| |||||||||||||||||||||    
T  37888887 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 38826915 - 38826969
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||| |||||  |||| |||||||| ||||||||||||||    
T  38826915 ggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcctt 38826969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 39983754 - 39983700
Alignment:
Q  106 gggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    |||||||| |||||||| |||||| ||||||||  ||||||||||||||||||||    
T  39983754 gggggtgcgaaatcgcataattaataaaagataagggggaaaagtgcaattaagc 39983700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 48359373 - 48359320
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||    
T  48359373 ggggtgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaagcc 48359320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 5735553 - 5735598
Alignment:
Q  113 caaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  5735553 caaaatcgcacaattaataaaagatagggggaaaaagtgcaattaa 5735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 8953817 - 8953858
Alignment:
Q  23 cccattttcccctcttttaatgatgattttgaacaaaacaca 64  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  8953817 cccattttcccttattttaatgatgattttgaacaaaacaca 8953858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 13863921 - 13864012
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||          | |||||||||| ||||||||||  |||||||||| || ||||||||||||||||||||    
T  13863921 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaa-tcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctt 13864012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 23686473 - 23686421
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||| | ||||||| |||||||||| |||||||||||||||||||||    
T  23686473 gggtgcaaaattgtacaattagcaaaagatag-ggggaaaagtgcaattaagcc 23686421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 35080012 - 35079960
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||| | |||||||| |||||||||| |||||||||||||||||||||    
T  35080012 gggtgcaaaaccccacaattagcaaaagatag-ggggaaaagtgcaattaagcc 35079960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 148
Target Start/End: Original strand, 35080223 - 35080263
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaa 148  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  35080223 ggggtgcaaaatcgcacaattaacaaaagata-aggggaaaa 35080263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 8643730 - 8643821
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||   ||||||||| |  |||||||||||||||||||    
T  8643730 aaaagatggggtgcaaaatcgctcgtttaataacatggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaagcct 8643821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 9034922 - 9034866
Alignment:
Q  106 gggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||| ||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  9034922 gggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagcct 9034866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 18925114 - 18925062
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||| ||||||||| |||||||||| |  ||||||||||||||||||    
T  18925114 ggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagcc 18925062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 29292972 - 29292920
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||  ||||  |||| |||||||||||||||||||||||    
T  29292972 tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctt 29292920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 38191312 - 38191260
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||| ||||| ||||||||| || |||||||||||||||| ||||    
T  38191312 tgcaaaatcgcataattagcaaaagataaagaggaaaagtgcaattaaacctt 38191260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 20418942 - 20418891
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  20418942 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 20418891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 22740591 - 22740641
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||||||||||    
T  22740591 ggggtgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 42418639 - 42418588
Alignment:
Q  113 caaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttg 164  Q
    |||||||||||||||| ||||  |||| ||||||||||| ||||||||||||    
T  42418639 caaaatcgcacaattagcaaactataggggggaaaagtgaaattaagccttg 42418588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 46816311 - 46816366
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||| ||||   ||||||||| ||| ||||||||||||||||||    
T  46816311 ggggtgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaagcct 46816366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 6908485 - 6908534
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||||| ||||| |||| |||| |||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaatag-gggggaaagtgcaattaa 6908534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 16198977 - 16199033
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||  ||||  |||  ||| |||||||||||||||||||    
T  16198977 ggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcctt 16199033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 27096094 - 27096047
Alignment:
Q  113 caaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||| ||||| |||| |||| ||||||||||||||||    
T  27096094 caaaatcgcacaattagcaaaatatag-gggggaaagtgcaattaagcc 27096047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 27182209 - 27182256
Alignment:
Q  113 caaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||| ||||| |||| |||| ||||||||||||||||    
T  27182209 caaaatcgcacaattagcaaaatatag-gggggaaagtgcaattaagcc 27182256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 30857904 - 30857960
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||| |||||||| ||||||||||   |  |||||||||||||||||||    
T  30857904 ggggtgcaaaattgcacaattgacaaaagataagagacaaaagtgcaattaagcctt 30857960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 36527437 - 36527382
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||| ||| |||||||||||||| ||||    
T  36527437 ggggtgcaaaatcgcacaattgacaaactatag-gggaaaaagtgcaattaaacctt 36527382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 7e-57; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 25175059 - 25175206
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||||||||    
T  25175059 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgca 25175158  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25175159 aaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 25175206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 25115967 - 25116116
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnnga--gggggtg 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||  |||||||    
T  25115967 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagaaggggggtg 25116066  T
Q  113 caaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25116067 caaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 25116116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 18433225 - 18433372
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||         |||||||||||    
T  18433225 atctttagccccttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctc-aaaaaaaagagggggtgca 18433323  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18433324 aaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctt 18433372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 34 - 162
Target Start/End: Complemental strand, 22429058 - 22428933
Alignment:
Q  34 ctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaa 133  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||         || |||||||||||||||||||||| ||||    
T  22429058 ctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaattgctc--aaaaaaagatggggtgcaaaatcgcacaattagcaaa 22428961  T
Q  134 agatagaggggaaaagtgcaattaagcct 162  Q
    |||||| |||| |||||||||||||||||    
T  22428960 agatag-gggggaaagtgcaattaagcct 22428933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 34577085 - 34577217
Alignment:
Q  27 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaat 126  Q
    |||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||         || ||||||||||||| ||||||    
T  34577085 ttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctc-aaaaaaaagatggggtgcaaaatcacacaat 34577183  T
Q  127 taacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    || |||||||||| ||| |||||||||||||||||    
T  34577184 tagcaaaagatag-gggaaaaagtgcaattaagcc 34577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 9665735 - 9665879
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||||||| || ||||||||||||||||||||||||||          || ||||||    
T  9665735 catcttttgccctttttcccctcttttaatattgattttgaacaaaacacaatttgcaaaagatggggtgcaaaatcgctcaaaaaaaat-agtgggtgc 9665833  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||| ||||||||| |||||||||| ||||||||||| |||||||||    
T  9665834 aaaat-gcacaattagcaaaagatag-ggggaaaagtggaattaagcc 9665879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 5779708 - 5779632
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatc 90  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  5779708 catcttttgccccttttcccctcttttaatgatgattttgaacaaaacacaattgtcaaaagatgaggtgcaaaatc 5779632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 12441159 - 12441084
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaat 89  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  12441159 catcttttgccggttttcccctcttttaatgatgattttgaacaaaacacaattgacaaaagatgaggtgcaaaat 12441084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 26020659 - 26020780
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc-nnnnnnnnngagggggtgc 113  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||||||| ||| ||||||||| | |||||||||||||          ||| ||||||    
T  26020659 atctttagccccttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatgagttgcaaaatcgctcaaaaaaaaaagagagggtgc 26020758  T
Q  114 aaaatcgcacaattaacaaaag 135  Q
    ||||||||||||||||||||||    
T  26020759 aaaatcgcacaattaacaaaag 26020780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 5187735 - 5187885
Alignment:
Q  17 cttttgcccattttcccctcttttaatgatgat---tttgaacaaaacacagttggcaaaagatggggtg---caaaatcgctcnnnnnnnnngaggggg 110  Q
    |||||| |||||||||| |||||||||||||||   ||||| ||||||||| |||||||| |||||||||   |||||||||||          ||||||    
T  5187735 cttttgtccattttcccatcttttaatgatgatgattttgaccaaaacacaattggcaaa-gatggggtgatgcaaaatcgctcaaaaaaaaataggggg 5187833  T
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||| |||||||||||||||||||  ||| ||||||||||||||||||    
T  5187834 tgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagcct 5187885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 18433105 - 18433015
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||         || |||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  18433105 aaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 18433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 41383022 - 41382896
Alignment:
Q  28 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 127  Q
    |||||||||||| |||||| ||||||||||||| ||| ||||||||||||| | ||||||||||||          ||| ||||||||||||||||||||    
T  41383022 tttcccctcttt-aatgattattttgaacaaaaaacatttggcaaaagatgagatgcaaaatcgct--aaaaaaaagagagggtgcaaaatcgcacaatt 41382926  T
Q  128 aacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||| |||||||| |||||||||    
T  41382925 aacaaaagataggggggaaaa-tgcaattaa 41382896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 23011227 - 23011079
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggc-aaaagatggggtgcaaaatcgctcnnnnnnnnngagg-gggt 111  Q
    |||||||||||   ||||||||||||||||||||||||||| ||||||||| ||| | |||| ||||||||||||||| |||           || ||||    
T  23011227 catcttttgccatctttcccctcttttaatgatgattttgagcaaaacacatttgacaaaaaaatggggtgcaaaatctctcaaaaaaaaaatggtgggt 23011128  T
Q  112 gcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  23011127 gcaaaatcgcacaattagcaaaagata-aggggaaaaatgcaattaagcc 23011079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 9869705 - 9869558
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggc--aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggt 111  Q
    |||| |||||||  ||||||||||||||| ||||||||||||||||||||| |||||  |||| | |||||||||||||||||          || ||||    
T  9869705 catcatttgccccctttcccctcttttaacgatgattttgaacaaaacacaattggccaaaaaaaaggggtgcaaaatcgctcaaaaaaaa--agtgggt 9869608  T
Q  112 gcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||| ||||  |||| | |||||||||||||||| ||||    
T  9869607 gcaaaatcgcacaattagcaaa--atagggaggaaaagtgcaattaaacctt 9869558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 26020540 - 26020448
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||| |||||||||||||||         || |||||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  26020540 aaaagatgcggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcctt 26020448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 25115847 - 25115756
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||          ||||||||||||||| |||||||  |||||||||| ||||||||||||||||||||||    
T  25115847 aaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcct 25115756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 25174939 - 25174848
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||          ||||||||||||||| |||||||  |||||||||| ||||||||||||||||||||||    
T  25174939 aaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcct 25174848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 19514963 - 19515019
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  19514963 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 19515019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 16466746 - 16466797
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcct 16466797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 18817575 - 18817665
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || ||||||||||||||||||    
T  18817575 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 22429196 - 22429250
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||||||    
T  22429196 ggggtgcaaaatcgcacaattagcaaaagatag-ggggaaaaatgcaattaagcct 22429250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 23011383 - 23011432
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  23011383 gggtgcaaaatcgcacaattaacaaaagata-agggaaaaagtgcaattaa 23011432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 33324835 - 33324893
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||| ||||||| ||||||||||| ||  ||||||||||||||||||    
T  33324835 gagggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagcct 33324893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 31569958 - 31569910
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  31569958 ggtgcaaaatcgcacaattgacaaaagatag-ggggaaaagtgcaattaa 31569910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 41383167 - 41383222
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||| ||||| |||| |||||||||| ||||||||||||    
T  41383167 ggggtgcaaaatcgcacaattagcaaaaaatag-ggggaaaagttcaattaagcctt 41383222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 12498621 - 12498566
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  12498621 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 12498566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 12498928 - 12498983
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  12498928 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 12498983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 18817006 - 18816951
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  |||||||||| || ||||| |||||||||||||    
T  18817006 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 18816951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 26570783 - 26570728
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||| ||||||||||    
T  26570783 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaagcct 26570728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 26571164 - 26571219
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  26571164 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 26571219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 34147512 - 34147566
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||| |||||  |||| ||| |||||||||||||||||||    
T  34147512 ggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcctt 34147566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 43464194 - 43464246
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||| |||||  |||| ||||||||||||||||||||||    
T  43464194 ggtgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaagcct 43464246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 9665609 - 9665560
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||| ||||||||| ||||||||  |||||||||||||||||||    
T  9665609 ggggtgcaaaattgcacaattagcaaaagat--aggggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 37780744 - 37780796
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||| ||||  |||| |||||||||| ||||||||||    
T  37780744 ggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagcc 37780796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 11351427 - 11351478
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||||  ||||||||||  | |||||||||||||||    
T  11351427 ggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaa 11351478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Original strand, 12441320 - 12441364
Alignment:
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  12441320 aaatcgcacaattagcaaaagatag--gggaaaagtgcaattaagcc 12441364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 16726135 - 16726084
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaat 155  Q
    |||| |||||||||||||||||||  |||||||||| ||| |||||||||||    
T  16726135 gaggaggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 21207280 - 21207229
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  21207280 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 21207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 22729058 - 22729008
Alignment:
Q  110 gtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||| |||||  |||| |||||||||||||||||||||    
T  22729058 gtgcaaaatcgcacaatttacaaactatag-ggggaaaagtgcaattaagcc 22729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 34576920 - 34576870
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||| ||||||||||||||| |||||||||| |||| |||||||||||||    
T  34576920 ggggtgtaaaatcgcacaattagcaaaagatag-gggggaaagtgcaattaa 34576870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 11350897 - 11350806
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||          | |||||||||||| ||||||||  |||||||||| || ||||| ||||||||||||||    
T  11350897 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaat-gcacaattggcaaaagataggggtgaaaaatgcaattaagcctt 11350806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 22729440 - 22729492
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||||    
T  22729440 ggggtgcaaaatcgcacaattggcaaattatag-ggggaaaagtgcaattaagc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 25941018 - 25941067
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    |||||||||||| ||||||||||  ||||  |||||||||||||||||||    
T  25941018 tgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaagc 25941067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 12441093 - 12441042
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||| |||||||||| ||||||||| ||  |||||||||||||||||    
T  12441093 ggtgcaaaattgcacaattaataaaagatag-ggaaaaaagtgcaattaagcc 12441042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 37610255 - 37610200
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||| |||||||  ||||  |||| |||||||||||||||||||||||    
T  37610255 ggggtgcaaaatcacacaattggcaaactatag-ggggaaaagtgcaattaagcctt 37610200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 37780373 - 37780318
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||| |||||||  ||||  |||| |||||||||||||||||||||||    
T  37780373 ggggtgcaaaatcacacaattggcaaactatag-ggggaaaagtgcaattaagcctt 37780318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 43463809 - 43463754
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||  ||||  ||| ||||||||||||||||||| ||||    
T  43463809 ggggtgcaaaatcgcacaattggcaaactata-aggggaaaagtgcaattaaacctt 43463754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 4e-55; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 18242000 - 18241852
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||||||||    
T  18242000 atcttttgccccttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgca 18241901  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18241900 aaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctt 18241852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 21032186 - 21032335
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc-nnnnnnnnngagggggtg 112  Q
    |||||||| |||  ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||          |||| || |    
T  21032186 catcttttaccccctttcccctcttttaatgatgattttgaacaaaacacaattggtaaaagatggggtgcaaaatcgctcaaagaaaaaagaggaggcg 21032285  T
Q  113 caaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21032286 caaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 11656690 - 11656836
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||| |||| ||| || |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||         |||||||||||    
T  11656690 atctttagcccctttacctctcttttattgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaataaagagggggtgca 11656789  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||| ||||||||||  | ||||||||||||||||||    
T  11656790 aaatcgcacaattagcaaaagataggagagaaaagtgcaattaagcc 11656836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 27 - 161
Target Start/End: Complemental strand, 33972126 - 33971994
Alignment:
Q  27 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaat 126  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||         ||||||||||||||||| |||||    
T  33972126 ttttcctctcttttaatgatgattttgaacaaaacacaattggcaaaagatagggtgcaaaatcgctc-aaaaataagagggggtgcaaaatcgtacaat 33972028  T
Q  127 taacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||| ||| |||| ||||||||||||    
T  33972027 taacaaaagatag-gggaaaaactgcaattaagcc 33971994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 10039808 - 10039675
Alignment:
Q  27 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaat 126  Q
    |||| |||||||||||||||||||||||||||||||||  || |||||||||||||| ||||||||||         || ||||||||||||||||||||    
T  10039808 ttttgccctcttttaatgatgattttgaacaaaacacaactgacaaaagatggggtgtaaaatcgctcataaaaaaaga-ggggtgcaaaatcgcacaat 10039710  T
Q  127 taacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    || |||||||||| ||||||||||||||||||||||    
T  10039709 tagcaaaagatag-ggggaaaagtgcaattaagcct 10039675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 23250734 - 23250590
Alignment:
Q  18 ttttgcccattttcccctcttttaatgatgattttgaac-aaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaa 116  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||         ||||||||||||     
T  23250734 ttttgccccctttcccctcttttaatgatgattttgaacaaaaacacaattggcaaaagatagggcgcaaaatcgctc-aaaaaaaagagggggtgcaag 23250636  T
Q  117 atcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||| ||||||| ||||||||||| ||| |||||||||||||||||||    
T  23250635 atctcacaattgacaaaagatag-gggaaaaagtgcaattaagcctt 23250590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 31598119 - 31598043
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatc 90  Q
    ||||||||| || ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31598119 catcttttgtccctttccccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatc 31598043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 3403953 - 3404044
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  3403953 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 3404044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 31598603 - 31598527
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatc 90  Q
    ||||||||| || ||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  31598603 catcttttgtccctttccccctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatc 31598527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 34 - 161
Target Start/End: Complemental strand, 30388187 - 30388062
Alignment:
Q  34 ctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaa 133  Q
    |||||||| |||||||||||||||||||| | ||| |||||||||||||||||||||||||         ||| || |||||||||||||||||| ||||    
T  30388187 ctcttttattgatgattttgaacaaaacataattgacaaaagatggggtgcaaaatcgctc-aaaaaaaagagaggctgcaaaatcgcacaattagcaaa 30388089  T
Q  134 agatagaggggaaaagtgcaattaagcc 161  Q
    |||||| |||| ||||||||||||||||    
T  30388088 agatag-gggggaaagtgcaattaagcc 30388062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 3403834 - 3403757
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgc 92  Q
    |||||| |||| |||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  3403834 atctttagccccttttcctctattttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgc 3403757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 33658661 - 33658726
Alignment:
Q  28 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgct 93  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  33658661 tttcccctcttttaatgatgattttgaacaaaacacaattgacaaaagacggggtgcaaaatcgct 33658726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 21032068 - 21031977
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||    
T  21032068 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagttag-ggggaaaagtgcaattaagcctt 21031977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 3403771 - 3403717
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  3403771 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3403717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 7654548 - 7654605
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttg 164  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||||||||||||||||    
T  7654548 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccttg 7654605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 12714488 - 12714436
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaatt 156  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  12714488 gaggggctgcaaaatcgcacaattaacaaaagatagggggcaaaagtgcaatt 12714436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 31598732 - 31598783
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  31598732 tgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaaacctt 31598783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 33829600 - 33829691
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || |||||||||||||||||||    
T  33829600 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 33829691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 2762696 - 2762751
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggc 70  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||| |||||    
T  2762696 atcttttgctcattttccccttttttaatgatgattttgaataaaacacaattggc 2762751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 33829080 - 33828990
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || ||||||||||||||||||    
T  33829080 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 3825583 - 3825530
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  3825583 gagggggtgcaaaatcgcacaattagcaaaatatag-ggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 13579648 - 13579705
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||| |||| ||||| || |||||||||||||||||||    
T  13579648 gagggggtgcaaaatcgcacaattagcaaacgatag-ggagaaaagtgcaattaagcct 13579705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 30388360 - 30388413
Alignment:
Q  105 agggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||||||| |||||||||| ||| |||||| |||||||    
T  30388360 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtacaattaa 30388413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 33655114 - 33655170
Alignment:
Q  106 gggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||||    
T  33655114 gggggtgcaaaattgcacaattagcaaaagata-aggggacaagtgcaattaagcctt 33655170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 2354810 - 2354866
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  ||||| ||||||| ||||||||||||||    
T  2354810 ggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaagcctt 2354866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 18242120 - 18242210
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||  |||||||||| |   |||| ||||||||||||    
T  18242120 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggaaaaaaaatgcaattaagcc 18242210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 31598274 - 31598328
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||||    
T  31598274 gggtgcaaaatcgcacaattagcaaaagataga-gggaaaaatacaattaagcctt 31598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 2762664 - 2762611
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaac-aaaagatagaggggaaaagtgcaatt 156  Q
    ||||||||||||||||||||||||| | ||||||||| ||| ||||||||||||    
T  2762664 gagggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 2762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 10039840 - 10039893
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaac-aaaagatagaggggaaaagtgcaatt 156  Q
    ||||||||||||||||||||||||| | ||||||||| ||| ||||||||||||    
T  10039840 gagggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 10039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 11656660 - 11656608
Alignment:
Q  105 agggggtgcaaaatcgcacaattaacaaaa-gatagaggggaaaagtgcaatt 156  Q
    |||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||    
T  11656660 agggggtgcaaaatcgcacaattatcaaaacgatagggggcaaaagtgcaatt 11656608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 21032158 - 21032107
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaa-aagatagaggggaaaagtgcaa 154  Q
    |||||||||||||||||||||||| |||| ||||||| ||| ||||||||||    
T  21032158 gagggggtgcaaaatcgcacaattgacaagaagatagggggcaaaagtgcaa 21032107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 22755091 - 22755142
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    |||||||||||||| |||| |||||  ||| |||||||||||||||||||||    
T  22755091 ggtgcaaaatcgcataattgacaaactataaaggggaaaagtgcaattaagc 22755142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 2762782 - 2762829
Alignment:
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||| ||||||||||||||||||||   ||||||||||||||||||||    
T  2762782 aaaatcacacaattaacaaaagataga--agaaaagtgcaattaagcctt 2762829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 10087858 - 10087912
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  ||||  | || |||||||||||||||||||||    
T  10087858 ggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaagcc 10087912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 33974299 - 33974353
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  ||||  |||| |||||||| ||||||||||||    
T  33974299 ggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 33974353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 18242033 - 18242082
Alignment:
Q  108 gggtgcaaaatcgcacaattaac-aaaagatagaggggaaaagtgcaatt 156  Q
    ||||||||||||||||||||||| ||||||||  ||| ||||||||||||    
T  18242033 gggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaatt 18242082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 4e-55; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 20968864 - 20968716
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||||||||    
T  20968864 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgca 20968765  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  20968764 aaatcgcacaattaacaaaagataggggggaaaggtgcaattaagcctt 20968716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 10293817 - 10293963
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||||||||    
T  10293817 atcttttgccccttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgca 10293916  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  10293917 aaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 10293963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 473 - 617
Target Start/End: Complemental strand, 3864132 - 3863993
Alignment:
Q  473 aactaattgttgctgtttgtttcattcaattgactcattttgctgctctttgcaaaacctcaaaatgttggcaatgtttcttgtagcatctaaaattatg 572  Q
    |||| ||| |||| |||||||||||||    ||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||    
T  3864132 aactcatttttgccgtttgtttcattc----gacacattttgctgctctttgcaaaac-tcaaaatgttggcaatgcttcttgtagcatctaaaattgtg 3864038  T
Q  573 ttgtcacaggaacttcatggtcggacagtacgagtgaactatgct 617  Q
    ||||||||||| ||| |||||||||  ||||||||||||||||||    
T  3864037 ttgtcacaggatctttatggtcggaaggtacgagtgaactatgct 3863993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 18875099 - 18875245
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||| ||||||||||  || ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||         |||||||||||    
T  18875099 atctttagcccattttcttctattttaatgatgattttgaataaaacacaattgccaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgca 18875198  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||| ||||||| |||||||||| ||| |||||||||||||||||    
T  18875199 aaatcgtacaattagcaaaagatagggggcaaaagtgcaattaagcc 18875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 47870967 - 47870822
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||          | |||||||    
T  47870967 catcttttgcccattttccccacttttaatgatgatttcgaacaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaaaa---aaggggtgc 47870871  T
Q  114 aaaa-tcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||| ||||| ||||| |||||||||| ||| ||||||||||||||||||    
T  47870870 aaaattcgcataattagcaaaagatag-gggaaaaagtgcaattaagcct 47870822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 17372429 - 17372298
Alignment:
Q  29 ttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatta 128  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||          ||||||||||||||||||||||||    
T  17372429 ttcccctcttttaatgatgattttgaacaaaatacaattggcaaaagatggggtgcaaaatcgctcaaaaaaaac-agggggtgcaaaatcgcacaatta 17372331  T
Q  129 acaaaagatagaggggaaaagtgcaattaagcc 161  Q
     ||||| |||| ||| ||| |||||||||||||    
T  17372330 gcaaaaaatagggggaaaaggtgcaattaagcc 17372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 3644678 - 3644538
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||          |  |||||||    
T  3644678 atcttttgcccattttcccctcttttaatgatgatttcgaacaaaacacaattggcaaaagatgaggtgcaaaatcgctcataaaaa---aaagggtgca 3644582  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||  |||||||| |||||||||||| | ||||||||||||||    
T  3644581 aaattacacaattagcaaaagatagagagaaaaagtgcaattaa 3644538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 26540775 - 26540915
Alignment:
Q  13 tcatcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtg 112  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||          |||  |||    
T  26540775 tcatcttttgcctcatttcccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaaaaaaaaggaagtg 26540874  T
Q  113 caaaatcgcacaattaacaaaagatagaggggaaaagtgcaa 154  Q
     ||||||||||||||| |||||||||| ||||||| ||||||    
T  26540875 taaaatcgcacaattagcaaaagatag-ggggaaaggtgcaa 26540915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 13657579 - 13657513
Alignment:
Q  28 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc 94  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13657579 tttcccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctc 13657513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 42627457 - 42627599
Alignment:
Q  18 ttttgcccattttcccctcttttaatgatgattttgaac-aaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaa 116  Q
    ||||| || |||||||||||||||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||         || ||| ||||||    
T  42627457 ttttgtcccttttcccctcttttaatgatgattttgaacaaaaaaacaattggcaaaaaatggggtgcaaaatcgctcataaaaaaaga-gggatgcaaa 42627555  T
Q  117 atcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||| |||||||| ||||||||||| ||||||||||||||||||||    
T  42627556 atcacacaattagcaaaagataga-gggaaaagtgcaattaagcc 42627599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 45060742 - 45060596
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||||          |  | || |    
T  45060742 catcttttgcccactttcccctattttaatgatgattttgaacaaaacacaattgacaaaaaatagggtgcaaaatcgctcaaaaaaaaa-aaagagtac 45060644  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  45060643 aaaatcgcataattagcaaaagatagtggggaaaagtgcaattaagcc 45060596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 9026942 - 9027086
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||| |||| |||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||          | |||||| |    
T  9026942 atctttagccccttttcctctcttttaatgatgatttttaacaaaacacaattggcaaaagatggggtgcaaaatcactcaaaaaaaac-aaggggtgta 9027040  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||| ||||||||| |||||||||| ||||||||||| |||||||||    
T  9027041 aaattgcacaattagcaaaagatag-ggggaaaagtgaaattaagcc 9027086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 14015839 - 14015697
Alignment:
Q  16 tcttttgcccattttcccctcttttaatgatgattttgaac-aaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||||| || ||||||||| |||||||||||| |||         |||| ||||||    
T  14015839 tcttttgccctctttcccctcttttaatgatgattttgaacaaaaacacaatttgcaaaagat-gggtgcaaaatcactcaaaaaaagagaggaggtgca 14015741  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||| ||| |||||||||| |||  ||||||||||||||    
T  14015740 aaatcgcacgattgacaaaagataaaggaaaaaagtgcaattaa 14015697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 17440970 - 17441119
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    |||||||||||   ||| |||||||||||||||||||||||||| |||||| ||| ||| | ||||||||||||||| ||           |  | ||||    
T  17440970 catcttttgccgccttttccctcttttaatgatgattttgaacataacacaattgacaacatatggggtgcaaaatcactaaaaataaaaaaaagagtgc 17441069  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  17441070 aaaatcgcacaattaacaaaagatagagaggaaaaatgcaattaagcctt 17441119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 1101049 - 1100983
Alignment:
Q  23 cccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaat 89  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||||    
T  1101049 cccattttcccctcttttaatgataattttgaacaaaatacaattgacaaaagatggggtgcaaaat 1100983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 47871121 - 47871177
Alignment:
Q  106 gggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  47871121 gggggtgcaaaatcgcacaattagcaaaagatag-ggggaaaagtgcaattaagcctt 47871177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 10293698 - 10293608
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||         |||||||||||||||||||||||| ||||||||||| ||  |||| ||||||||||||    
T  10293698 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgcaattaagcc 10293608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 20969019 - 20969073
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||||||||||    
T  20969019 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 53687942 - 53687886
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  53687942 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 53687886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 40848961 - 40849016
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  ||||  |||||||||||||||||||||||||||    
T  40848961 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagcct 40849016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 3644783 - 3644837
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  3644783 ggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaagcc 3644837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 18874935 - 18874881
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||||| |||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattgagcct 18874881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 45060872 - 45060926
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||| ||||||||||||||| |||||||||| || |||||||||||||||||||    
T  45060872 gggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagcct 45060926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 4947312 - 4947263
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaatta 157  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  4947312 gggtgcaaaatcgcacaattaacaaaaaataggggtgaaaagtgcaatta 4947263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 8314066 - 8314013
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||| |||||| |||| || ||||||||||||||||||    
T  8314066 gggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaagcc 8314013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 27238900 - 27238951
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  27238900 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 27238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 36180990 - 36181045
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||| |||||||||||||||||||||  |||| | ||||||||||||||||||||    
T  36180990 ggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagcct 36181045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 48159951 - 48159896
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  48159951 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 48159896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 3353181 - 3353128
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||    
T  3353181 ggggtgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaagcc 3353128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 8315083 - 8315136
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||| |||||| |||| |||| |||||||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatatag-gggggaaagtgcaattaagcct 8315136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 42455839 - 42455789
Alignment:
Q  112 gcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||| |||||  |||| ||||||||||||||||||||||    
T  42455839 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 42455789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 42673296 - 42673349
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||    
T  42673296 ggggtgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaagcc 42673349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 1927825 - 1927772
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||| ||||  |||||||||| ||||||| |||||||||||||    
T  1927825 gggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaagcc 1927772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 3644720 - 3644772
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaa-aagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||||| ||| | ||||||||| ||||||||||||||    
T  3644720 ggggtgcaaaatcgcacaattagcaagaggatagagggcaaaagtgcaattaa 3644772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 4947470 - 4947545
Alignment:
Q  18 ttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc 94  Q
    ||||||||  |||||||| |||  |||| |||||||||||||||||| ||||||||||||   ||||||||||||||    
T  4947470 ttttgccctctttcccctatttctatgacgattttgaacaaaacacaattggcaaaagat-atgtgcaaaatcgctc 4947545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 26007235 - 26007180
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||| |||||||| ||||||||||||||    
T  26007235 ggggtgcaaaatcgcacaattgacaaactataggggggaaaa-tgcaattaagcctt 26007180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 1101087 - 1101141
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaac-aaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||    
T  1101087 gagggggtgcaaaatcgcacaattgacaaaaagatag-gggcaaaagtgcaattaa 1101141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 9026789 - 9026739
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||| |||||||||||||||||||| | |||||| |||||||||    
T  9026789 ggggtgcaaaattgcacaattaacaaaagatag-gaggaaaaatgcaattaa 9026739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 14015964 - 14016014
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||||| |||||||||| |  |||||||||||||||    
T  14015964 ggggtgcaaaatcgcacaattagcaaaagatag-gatgaaaagtgcaattaa 14016014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 23630035 - 23630086
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||||| ||||| ||||  || ||||||||||||||    
T  23630035 ggggtgcaaaatcgcacaattaccaaaaaataggaggaaaaagtgcaattaa 23630086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 53766580 - 53766635
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||| ||||||||  ||||  |||| |||||||||||||||||||||||    
T  53766580 gggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaagcctt 53766635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 1101182 - 1101236
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||| ||||||||||||  | |||||||||  ||||||||||||||||||||||    
T  1101182 gggtgaaaaatcgcacaaaaagcaaaagataagggggaaaagtgcaattaagcct 1101236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 17372594 - 17372645
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    ||||||||||||||||||||||  |||  ||| |||||||||||||||||||||    
T  17372594 ggggtgcaaaatcgcacaattagtaaa--atataggggaaaagtgcaattaagc 17372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 21896511 - 21896564
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||| |||||| |||| ||| |||| ||||||||||||    
T  21896511 ggggtgcaaaatcgcacaattgacaaaatatag-gggaaaaaatgcaattaagcc 21896564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 26540747 - 26540694
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||| |||||||| |||||| |||| ||| ||||||||||||||    
T  26540747 gagggggtgcaaaattgcacaattgacaaaaaatag-gggcaaaagtgcaattaa 26540694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 42673031 - 42672978
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  ||||  |||| |||||||||||||||||||||    
T  42673031 ggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 42672978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 47666335 - 47666389
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||| ||||||||  ||||  |||| |||||||||||||||||||||    
T  47666335 ggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcc 47666389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 48160333 - 48160387
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  ||||  |||| |||| ||||||||||||||||    
T  48160333 ggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaagcc 48160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 4947439 - 4947386
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaa-gatagaggggaaaagtgcaatt 156  Q
    ||||| ||||||||||||||||||  ||||| ||||||||| ||||||||||||    
T  4947439 gagggagtgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaatt 4947386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 10293784 - 10293735
Alignment:
Q  108 gggtgcaaaatcgcacaattaac-aaaagatagaggggaaaagtgcaatt 156  Q
    ||||||||||||||||||||||| ||||||||  ||| ||||||||||||    
T  10293784 gggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaatt 10293735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 47665963 - 47665910
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||| |||||  |||  ||| ||||||||||||||||||    
T  47665963 ggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagcct 47665910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 18875065 - 18875017
Alignment:
Q  109 ggtgcaaaatcgcacaattaac-aaaagatagaggggaaaagtgcaatt 156  Q
    |||||||||||||||||||| | ||||||||| ||| ||||||||||||    
T  18875065 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 18875017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 21895712 - 21895656
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagagggg-aaaagtgcaattaagcct 162  Q
    ||||||||||||| |||||||  ||||| |||| |||| ||||||||||||||||||    
T  21895712 ggggtgcaaaatcacacaattggcaaaacatagtggggaaaaagtgcaattaagcct 21895656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 22429211 - 22429159
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    ||||||||| ||||||||||  ||||| |||| || |||||||||||||||||    
T  22429211 gggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaagc 22429159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 40848574 - 40848519
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||| ||||||||||||||  ||||  |||| |||||||||||||||||||||||    
T  40848574 ggggtgtaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcctt 40848519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 106; Significance: 1e-52; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 45682 - 45535
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||| |||||    
T  45682 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggagtgca 45583  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45582 aaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcctt 45535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 45771 - 45861
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  45771 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatag-ggggaaaagtgcaattaagcct 45861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 1e-52; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 15156030 - 15155882
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||||    
T  15156030 catcttttgccccttttcccctcttttagtgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgc 15155931  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15155930 aaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 15155882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 12281334 - 12281480
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||         |||||||||||    
T  12281334 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttgacaaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgca 12281433  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||    
T  12281434 aaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcc 12281480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 34313908 - 34313765
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||         |||||||||||    
T  34313908 atcttttgccccttttcccctcttttaatgataattttgaacaaaacacagtttgcaaaagatagggtgcaaaatcgctc-aaaaaaaagagggggtgca 34313810  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  34313809 aaatcgcacaattaacaaaagat--aggggaaaagtgcaattaagcc 34313765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 37752325 - 37752470
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||         |||||||||||    
T  37752325 atctttagccccttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaatatggggtgcaaaatcgctc-aaaaaaaagagggggtgca 37752423  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  37752424 aaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 37752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 9465780 - 9465906
Alignment:
Q  13 tcatcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtg 112  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||         |||||||||    
T  9465780 tcatcttttgccccttttcccctcttttaatgatgattttgaacaaaacacaattggcaaaaaatggggtgcaaaattgctcaaaaaaaaagagggggtg 9465879  T
Q  113 caaaatcgcacaattaacaaaagatag 139  Q
    |||||||||||||||||||||||||||    
T  9465880 caaaatcgcacaattaacaaaagatag 9465906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 18019996 - 18020142
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||         ||||||||||    
T  18019996 catcttttgccccttttcccttcttttaatgacgattttgaacaaaacgcagttgccaaaagatggggtgcaaaatcgctc-aaaaaaaagagggggtgc 18020094  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  18020095 aaaatcgcacaattaacaaaagat--agggtaaaagtgcaattaagcctt 18020142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 43162383 - 43162234
Alignment:
Q  13 tcatcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc--nnnnnnnnngaggggg 110  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||           |||| ||    
T  43162383 tcatcttttgccccttttcccctcttttaatgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcaaaaaaaaaaagaggagg 43162284  T
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  43162283 tgcaaaatcgcacaattaacaaaatatag-ggggaaaagtgcaattaagcc 43162234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 16929151 - 16929296
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||         |||||||||||    
T  16929151 atctttagtccattttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgttc-aaaaaaaagagggggtgca 16929249  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||| |||||||||| || ||||||||||||||||||    
T  16929250 aaatcgcacaattagcaaaagataggggagaaaagtgcaattaagcc 16929296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 43246105 - 43246236
Alignment:
Q  37 ttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnn-gagggggtgcaaaatcgcacaattaacaaaag 135  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||          |||||||||||||||| |||||||| ||||||    
T  43246105 ttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcacacaattagcaaaag 43246204  T
Q  136 atagaggggaaaagtgcaattaagccttgttt 167  Q
    |||| |||||||||||||||||||||||||||    
T  43246205 ataggggggaaaagtgcaattaagccttgttt 43246236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 765951 - 766054
Alignment:
Q  23 cccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||||||||||||||||    
T  765951 cccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctc--aaaaaaagagggggtgcaaaatcgca 766048  T
Q  123 caatta 128  Q
    ||||||    
T  766049 caatta 766054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 7127796 - 7127660
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||||           ||||| |||    
T  7127796 catcttttgcccattttcccctcttttaatgatgatttttaacaaaacacaattgacaaaagatgaggtgcaaaatcgct---aagaaaaaaggggatgc 7127700  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaa 154  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  7127699 aaaatcgcacaattagcaaaagatag-ggggaaaagtgcaa 7127660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 41662247 - 41662105
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||| ||||||||||||||||||||||      |||||||||||||||||||||||  ||||||||||||||          |||||||||||    
T  41662247 atcttttgccccttttcccctcttttaatgatga------acaaaacacagttggcaaaagatatggtgcaaaatcgcttaaaaaaaaagagggggtgca 41662154  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||  ||| ||| |||||||||||||||    
T  41662153 aaatcgcacaattaacaaaagatatggggaaaatgtgcaattaagcctt 41662105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 28 - 159
Target Start/End: Complemental strand, 74816 - 74688
Alignment:
Q  28 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 127  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||           | |||||||||||||||||||||    
T  74816 tttcccctcttttaatgatgattttgaacaaaacacaattagcaaaagatgaggtgcaaaatcgct--aaaaaaaaaaaggggtgcaaaatcgcacaatt 74719  T
Q  128 aacaaaagatagaggggaaaagtgcaattaag 159  Q
    | |||||||| || ||||||||||||||||||    
T  74718 agcaaaagatgga-gggaaaagtgcaattaag 74688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 33748120 - 33747983
Alignment:
Q  24 ccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcac 123  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||         ||| || ||||||||| |||    
T  33748120 ccattttcctctcttttagtgatgattttgaacaaaacacaattggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagcggatgcaaaatcacac 33748021  T
Q  124 aattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||| |||||||||  ||  ||||||||||||||||||    
T  33748020 aattagcaaaagata-tggaaaaaagtgcaattaagcct 33747983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 23123484 - 23123338
Alignment:
Q  17 cttttgcccattttcccctcttttaatgatgattttgaac-aaaacacagttggcaaaagatggggtgcaaaatcgct--cnnnnnnnnngagggggtgc 113  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| ||            || ||||||     
T  23123484 cttttgccccttttcccctcttttaatgatgattttgaacaaaaacacaattggcaaaagat-gggtgcaaaatcactaaaaaaaaaaaagatggggtgt 23123386  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||    
T  23123385 aaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcc 23123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 22787020 - 22787099
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc 94  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  22787020 catcttttgccccttt-cccctcttttaatgatgattttgaacaaaacacaattggaaaaagatgaggtgcaaaatcgctc 22787099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 37670099 - 37669958
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||||||||  ||| | |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||          ||||  | |||    
T  37670099 atcttttgccccattttctctcttttaataatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgct--aaaaaaaagaggtagggca 37670002  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||| |||||||||||||||||||  | ||||||||||||||||    
T  37670001 aaattgcacaattaacaaaagataaggaggaaaagtgcaattaa 37669958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 9930744 - 9930885
Alignment:
Q  13 tcatcttttgcccattttcccctcttttaatgatgattttgaac-aaaacacagttggcaaaagatggggtgcaaa-atcgctcnnnnnnnnngaggggg 110  Q
    |||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||| ||||| |||||||||||| ||||||           |||| |    
T  9930744 tcatcttttgccccctttcccctcttttaatgatgattttgaacaaaaacacaattgacaaaatatggggtgcaaacatcgct-aaaaaaaaacagggag 9930842  T
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaa 154  Q
    |||||||||||||||||||||||||||| ||||| |||||||||    
T  9930843 tgcaaaatcgcacaattaacaaaagata-agggggaaagtgcaa 9930885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 15156149 - 15156239
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||||          |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  15156149 aaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaagcc 15156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 41662367 - 41662457
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||    
T  41662367 aaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 43245961 - 43245871
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  43245961 aaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaagcc 43245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 765824 - 765736
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaag 159  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  765824 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 12281214 - 12281122
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||         |||| |||||||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  12281214 aaaagatggggtgcaaaatcgctcaaaaaaaaagaggaggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctt 12281122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 16928999 - 16928941
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  16928999 gagggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaattaagcct 16928941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 9823325 - 9823421
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttgttt 167  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || ||||||||||||||||||||||||    
T  9823325 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccttgttt 9823421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 3463786 - 3463707
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgct 93  Q
    ||||||||||||  || || ||||||||||||||||||| |||||||| || ||||||||||||| |||| |||||||||    
T  3463786 catcttttgcccccttacctctcttttaatgatgattttaaacaaaactcaattggcaaaagatgaggtgtaaaatcgct 3463707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 3463909 - 3463999
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||         ||| |||||||| |||||||||||| ||||| |||| |||||||||||||||||||||    
T  3463909 aaaagatggggtgcaaaatcgctcaaaacaaaggagagggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 3463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 22851444 - 22851390
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  22851444 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaagcc 22851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 37752138 - 37752084
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||||||||||||    
T  37752138 ggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcc 37752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 11007750 - 11007814
Alignment:
Q  29 ttcccctcttttaatgatgattttgaac-aaaacacagttggcaaaagatggggtgcaaaatcgct 93  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||| || |||||||||||||||    
T  11007750 ttcccctcttttaatgatgattttgaacaaaaacacaattggcaaaaaat-gggtgcaaaatcgct 11007814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 13937389 - 13937444
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||| |||||||||| |||||| |||| ||||||||||||||||||||||    
T  13937389 ggggtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaagcct 13937444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 39724012 - 39724102
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || ||||||||||||||||||    
T  39724012 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 39724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 9822802 - 9822748
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||| | ||||||||| || ||||||||||||||||||    
T  9822802 ggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaagcc 9822748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 13026687 - 13026634
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||  |||||||||| || |||||||||||||||||||    
T  13026687 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 13026634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 13936812 - 13936721
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||   ||||||||| |||||||||||||||||||||||    
T  13936812 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggtaaaagatag-ggggaaaagtgcaattaagcctt 13936721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 43162536 - 43162588
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaatta 157  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  43162536 gagggggtgcaaaatcgcacgattgacaaaagatag-ggggaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 13027245 - 13027332
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || |||||||||||||||    
T  13027245 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 43598658 - 43598735
Alignment:
Q  15 atcttttgcccattttcccctctttta---atgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatc 90  Q
    ||||||||||| ||| |||||||||||   ||||||||||||||||||||||| ||| ||||| ||| |||||||||||    
T  43598658 atcttttgccccttt-cccctcttttatcgatgatgattttgaacaaaacacaattgacaaaaaatgtggtgcaaaatc 43598735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 23123514 - 23123567
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaag 159  Q
    ||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  23123514 gagggggtgcaaaatcgcacaattagcaaaagata-agggg-aaagtgcaattaag 23123567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 34498555 - 34498610
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  34498555 ggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagcct 34498610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 37670253 - 37670314
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttgttt 167  Q
    ||||||||||||||| ||||||||||| |||||||| || |||||||||||||||| |||||||    
T  37670253 gagggggtgcaaaattgcacaattaac-aaagatag-ggagaaaagtgcaattaagacttgttt 37670314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 3307388 - 3307338
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||| ||||||||||| || ||||| ||||||||||||    
T  3307388 tgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaagcc 3307338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 767720 - 767760
Alignment:
Q  121 cacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  767720 cacaattaacaaaagatag-ggggaaaagtgcaattaagcct 767760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 140
Target Start/End: Original strand, 74981 - 75017
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagataga 140  Q
    ||||||||||||||||||||||||| |||||||||||    
T  74981 gagggggtgcaaaatcgcacaattagcaaaagataga 75017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 6092825 - 6092775
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  6092825 tgcaaaatcgcacaattgacaaaagatag-ggggaaaa-tgcaattaagcctt 6092775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 25438846 - 25438794
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaag 159  Q
    |||||||||||||||||||||  ||||  |||| |||||||||||||||||||    
T  25438846 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 34498176 - 34498125
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||||| |||||  |||| ||| ||||||||||||||    
T  34498176 ggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 37396762 - 37396707
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||   ||||  |||| ||||||||||||||||||||||    
T  37396762 ggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaagcct 37396707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 17431339 - 17431285
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||| |||||||||||||| |||||  |||  |||||||||||||||||||||||    
T  17431339 ggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaagcctt 17431285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 37397145 - 37397199
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||| ||||||||||||||||  ||||  |||| |||||||||||||||||||||    
T  37397145 ggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37397199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 41662573 - 41662519
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||  ||||  |||  |||||||||||||||||||||||    
T  41662573 ggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagcctt 41662519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 9465653 - 9465605
Alignment:
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||| |||||||| ||||||||||| | |||||||||||||||||||||    
T  9465653 aaaattgcacaattgacaaaagatag-gaggaaaagtgcaattaagcctt 9465605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 18019968 - 18019915
Alignment:
Q  104 gagggggtgcaaaatcgcacaatta-acaaaagatagaggggaaaagtgcaatt 156  Q
    |||||||||||||||||||||||||   ||||||||| ||| ||||||||||||    
T  18019968 gagggggtgcaaaatcgcacaattaggaaaaagatagggggcaaaagtgcaatt 18019915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 22786892 - 22786843
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||| ||||||||  ||||||||| ||| ||||||||||||||    
T  22786892 ggtgcaaaatcacacaattagtaaaagatagggggaaaaagtgcaattaa 22786843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 33727108 - 33727169
Alignment:
Q  110 gtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttgtttcttt 171  Q
    ||||||||||||||||||| ||||  ||| ||| |||||||| |||||| |||| |||||||    
T  33727108 gtgcaaaatcgcacaattagcaaactataaaggagaaaagtgtaattaaaccttctttcttt 33727169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 20861638 - 20861698
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttgttt 167  Q
    |||||||||||||||||||||  || |  |||| ||| |||| ||||||||||||||||||    
T  20861638 ggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaagccttgttt 20861698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 24473768 - 24473824
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||  ||||  |||| |  ||||||||||||||||||||    
T  24473768 ggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaagcctt 24473824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 25439126 - 25439181
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||| ||| |||||||||||||| ||||    
T  25439126 ggggtgcaaaatcgcacaattgacaaactatag-gggaaaaagtgcaattaaacctt 25439181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 1e-52; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 13198814 - 13198962
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||         |||||||||||    
T  13198814 atcttttgcccattttcccctcttttaatgatgactttgaacaaaacacggttggcaaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgca 13198913  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13198914 aaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctt 13198962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 3930325 - 3930179
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||||    
T  3930325 catcttttgccccttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgc 3930226  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||| |||||| ||||||||| ||| |||||||||||||||||    
T  3930225 aaaatcgcataattaataaaagatag-gggaaaaagtgcaattaagcc 3930179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 11241534 - 11241389
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||| ||||    
T  11241534 atcttttgccccttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctc-aaaaaaaagaggggatgca 11241436  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  11241435 aaatcgcacaattaacaaaagataaggaggaaaagtgcaattaagcc 11241389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 35393685 - 35393831
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||         |||||||||||    
T  35393685 atcttttgcccattttcccctcttttaatgatgattttgagcaaaacacaattgacaaaagatggggtgcaaaatcgctc-ataaaaaagagggggtgca 35393783  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    || ||||||||||| |||||||||| || ||||||||||||||||||||    
T  35393784 aattcgcacaattagcaaaagatag-ggtgaaaagtgcaattaagcctt 35393831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 16555661 - 16555514
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc-nnnnnnnnngagggggtgc 113  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||          ||||||||||    
T  16555661 atctttagccctttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagat-gggtgcaaaatcgctcaaaaaaaaaagagggggtgc 16555563  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  16555562 aaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcct 16555514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 27304862 - 27304718
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||         |||||||||||    
T  27304862 atctttagcccattttcctctcttttaatgatgattttgaacaaaacacaattggcaaaatatgggttgcaaaatcgctcaaaagaaaagagggggtgca 27304763  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||| || |||||  |||||||||| |||||||||||    
T  27304762 aaatcgcacaattagcagaagat--aggggaaaagggcaattaagcc 27304718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 49178724 - 49178866
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgct-cnnnnnnnnngagggggtgc 113  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |         ||||||||||    
T  49178724 atcttttgccccttt-cccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctccaaaaaaaaagagggggtgc 49178822  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaatta 157  Q
    ||||||||||||||  |||||||||| || ||||||||||||||    
T  49178823 aaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 39415371 - 39415246
Alignment:
Q  15 atcttttgccca-ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||| ||||||    
T  39415371 atcttttgcccccttttcccctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctcaaataaaaagagagggtgc 39415272  T
Q  114 aaaatcgcacaattaacaaaagatag 139  Q
    ||||||||||||||| ||||||||||    
T  39415271 aaaatcgcacaattagcaaaagatag 39415246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 22681788 - 22681934
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||  |||||||||| ||||          |   |||||    
T  22681788 catcttttgccccttttcccctcttttaatgatgattttgaacaaaacatagttgacaaaagatatggtgcaaaattgctcaaaaaaataaa--tggtgc 22681885  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  22681886 aaaattgcacaattaacaaaagataggagggaaaagtgcaattaagcct 22681934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 8488403 - 8488534
Alignment:
Q  27 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaat 126  Q
    |||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||         |||||||||||||||||||||||    
T  8488403 ttttcctctcttttaatgatgattttgaacaaaatacaattgacaaaagatggggtgcaaaatcgctc-aaaaaaaagagggggtgcaaaatcgcacaat 8488501  T
Q  127 taacaaaagatagaggggaaaagtgcaattaagc 160  Q
    ||  |||||||| ||| |||||||||||||||||    
T  8488502 tagaaaaagata-aggcgaaaagtgcaattaagc 8488534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 3844404 - 3844470
Alignment:
Q  28 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc 94  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3844404 tttcccatcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctc 3844470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 8182092 - 8182229
Alignment:
Q  29 ttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc-nnnnnnnnnga-gggggtgcaaaatcgcacaat 126  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||          || |||||||||||||||||||||    
T  8182092 ttcccctcttttaatgatgattttgaacaaaacacaattggtaaaagatgggatgcaaaatcgctcaacaaaaaaagaggggggtgcaaaatcgcacaat 8182191  T
Q  127 taac-aaaagatagaggggaaaagtgcaattaagcctt 163  Q
    || | |||| |||| || ||||||||||||||||||||    
T  8182192 tagcaaaaaaataggggtgaaaagtgcaattaagcctt 8182229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 5206105 - 5206028
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgc 92  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||    
T  5206105 atctttagcccattttcctctcttttaatgatgattttgaacaaaataaaattggcaaaagatggggtgcaaaatcgc 5206028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 3930444 - 3930534
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||||          ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  3930444 aaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatag-ggggaaaagtgcaattaagcct 3930534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 7603261 - 7603186
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaat 89  Q
    ||||||||| ||  |||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  7603261 catcttttgtcccatttcccctattttaatgatgattttgaacaaaacacaattgacaaaagagggggtgcaaaat 7603186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 16555781 - 16555871
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||         || |||||||||||||||||||||| |||||||||  |||||||||||||||||||||    
T  16555781 aaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaagcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 54508964 - 54508813
Alignment:
Q  15 atcttttgcccattttcccctcttttaatga---tgattttgaac-aaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngaggggg 110  Q
    ||||||||||| ||||||||| |||||||||   ||||||||||| |||||||| || ||||||||| ||||||||||||||||         ||| |||    
T  54508964 atcttttgccccttttcccctattttaatgatgatgattttgaacaaaaacacaatttgcaaaagatagggtgcaaaatcgctc-aaaaaaaagagaggg 54508866  T
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||| |||||||  |||||||| |  || |||||||||||||||||||    
T  54508865 tgcaaaatcacacaattggcaaaagattggaggaaaaagtgcaattaagcctt 54508813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 9023680 - 9023740
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttgttt 167  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||||||||    
T  9023680 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccttgttt 9023740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 18077167 - 18077258
Alignment:
Q  72 aaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||| |||||||||||||         ||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||    
T  18077167 aaagatgggatgcaaaatcgctcaacaaaaaagagggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcctt 18077258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 24775783 - 24775839
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  24775783 ggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcctt 24775839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 56505747 - 56505692
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  56505747 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 56505692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 22681631 - 22681576
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  22681631 gagggggtgcaaaatcgcacaattgacaaaagatag-gggggaaagtgcaattaagc 22681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 36095871 - 36095803
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttgtttctttgaca 175  Q
    |||||||||||||||||||||  |||||||||| || ||||| |||||||||||||| ||| |||||||    
T  36095871 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccttttttttttgaca 36095803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 50678869 - 50678778
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || |||||||||||||||||||    
T  50678869 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 50678778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 5206042 - 5205987
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||  |||||||||||||||| | ||||||||||||||||||||    
T  5206042 ggggtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaagcct 5205987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 24775742 - 24775797
Alignment:
Q  38 tttaatgatgattttgaacaaaa-cacagttggcaaaagatggggtgcaaaatcgc 92  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  24775742 tttaatgatgattttgaacaaaaacacaattgacaaaagatggggtgcaaaatcgc 24775797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 39744465 - 39744520
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||||||||||||||    
T  39744465 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 39744520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 13198660 - 13198606
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||||||||  ||||||||| ||| |||||||||||||||    
T  13198660 gagggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgcaattaa 13198606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 5206231 - 5206283
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  5206231 gggtgcaaaatcgcacaattaa-aaaagataagggggaaaagtgcaattaagcc 5206283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 7603200 - 7603146
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    ||||||||||||||| |||||||||| |||||||  |||||||||||||||||||||    
T  7603200 gagggggtgcaaaattgcacaattaaaaaaagat--aggggaaaagtgcaattaagc 7603146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 28196773 - 28196830
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttg 164  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||||||||    
T  28196773 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccttg 28196830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 47219203 - 47219252
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||| ||||||||||||| ||||| |||||||||    
T  47219203 ggtgcaaaatcgcacaattagcaaaagatagaggtgaaaaatgcaattaa 47219252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 293217 - 293273
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||| ||| |||||||||||||||||||    
T  293217 ggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcctt 293273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 36096439 - 36096526
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || |||||||||||||||    
T  36096439 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 39415528 - 39415580
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||| ||||||||| |||||||||||||| ||||||||| |||||||||    
T  39415528 tgcaaaattgcacaattagcaaaagatagagggaaaaagtgcagttaagcctt 39415580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 45830160 - 45830251
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||          | |||||| |||||||||||||| ||||||||||| || ||||||||| |||||||||    
T  45830160 aaaagatggggtgcaaaatcgctcttttaaaaacatggggtgtaaaatcgcacaattgacaaaagataggggtgaaaagtgcgattaagcct 45830251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 28196400 - 28196345
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  28196400 ggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagcct 28196345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 50679388 - 50679478
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||          | |||||||||||||| ||||||  |||||||||| || ||||||||||||||||||    
T  50679388 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaagcc 50679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 169439 - 169493
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||| |||||  |||| |||||||| ||||||||||||    
T  169439 ggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 169493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 32703650 - 32703704
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  ||||  |||| |||||||||||||||||||||    
T  32703650 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 32703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 8182049 - 8181992
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaa-gatagaggggaaaagtgcaattaagc 160  Q
    ||||||||||||||||||||||||  ||||| ||||| ||| ||||||||||||||||    
T  8182049 gagggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagc 8181992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 23540253 - 23540306
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||| |||||  |||| || ||||||||||||||||||    
T  23540253 gggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaagcc 23540306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 25161932 - 25161879
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||||    
T  25161932 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 27304890 - 27304943
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaac-aaaagatagaggggaaaagtgcaatt 156  Q
    ||||||||||||||||||||||||| | ||||||||| ||| ||||||||||||    
T  27304890 gagggggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtgcaatt 27304943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 43051216 - 43051308
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||          | ||||||||||||| |||||||  |||||||||| || ||||| ||||||||||||||    
T  43051216 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaagcctt 43051308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 8488242 - 8488186
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||||||||||  |   |||| ||||||||||||||    
T  8488242 ggggtgcaaaatcgcacaattaacaaaagatatggaaaaaaaatgcaattaagcctt 8488186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 9380744 - 9380796
Alignment:
Q  110 gtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  9380744 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 9380796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 26207746 - 26207802
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||  ||||  |||| |||||||| ||||||||||||||    
T  26207746 ggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcctt 26207802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 32703279 - 32703223
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||| ||||||||||||  ||||  |||| |||||||||||||||||||||||    
T  32703279 ggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaagcctt 32703223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 9023298 - 9023243
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  ||||  |||| || |||||||||||||||||||    
T  9023298 ggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagcct 9023243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 11241661 - 11241715
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||| |||||||  |||||||||| |||||||||| |||||||||||    
T  11241661 ggggtgcaaaatcccacaattggcaaaagatag-ggggaaaagtacaattaagcct 11241715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 4239366 - 4239420
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  ||||  |||| ||| |||||||||||||||||    
T  4239366 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4239420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 9380361 - 9380307
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||| ||||||||||||||||  ||||  |||| |||||||||||||||||||||    
T  9380361 ggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 169068 - 169011
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggg-gaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||  ||||  |||| ||| ||||||||||||||||||||    
T  169068 ggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaagcctt 169011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 11529222 - 11529169
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    ||||||||||||| |||||||  |||||| ||| | ||||||||||||||||||    
T  11529222 ggggtgcaaaatcacacaattggcaaaagttagggaggaaaagtgcaattaagc 11529169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 39912101 - 39912052
Alignment:
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||| |||  |||| | |||||||||||||||||||||    
T  39912101 aaaatcgcacaattaataaactatagggaggaaaagtgcaattaagcctt 39912052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 43292091 - 43292038
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    ||||||||||||||||||||| |||||  |||| ||  ||||||||||||||||    
T  43292091 ggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaagc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 16555695 - 16555743
Alignment:
Q  109 ggtgcaaaatcgcacaattaac-aaaagatagaggggaaaagtgcaatt 156  Q
    |||||||||||||||||||| | ||||||||  ||||||||||||||||    
T  16555695 ggtgcaaaatcgcacaattagcaaaaagataagggggaaaagtgcaatt 16555743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 26207414 - 26207359
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||  ||||  |||| |||| ||||||||||||||||||    
T  26207414 ggggtgcaaaatcgcacaattggcaaactatag-gggggaaagtgcaattaagcctt 26207359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 43050661 - 43050605
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||   ||||||||| |  ||||||||||||||| ||||    
T  43050661 ggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaaacctt 43050605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 4e-52; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 17518448 - 17518302
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||||||||    
T  17518448 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgca 17518349  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  17518348 aaatcgcacaattaacaaaagata-aggggaaaggtgcaattaagcct 17518302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 47955516 - 47955663
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||||||||    
T  47955516 atcttttgccctttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgca 47955615  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  47955616 aaatcgcacaattaataaaagataggggggaaaagtgcaattaagcct 47955663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 8108866 - 8108724
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||          ||||||||||    
T  8108866 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaa-agggggtgca 8108768  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||||||||| | ||||||||||||||||    
T  8108767 aaatcgcacaattaacaaaagatagggaggaaaagtgcaattaa 8108724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 41083118 - 41083265
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgct-cnnnnnnnnngagggggtgc 113  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||           ||||||||||    
T  41083118 atcttttgccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaatattgggtgcaaaatcgctaaaaaaaaaaagagggggtgc 41083217  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  41083218 aaaatcgcacaactaacaaaagatag-ggggaaaagtgcaattaagcct 41083265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 31848105 - 31848247
Alignment:
Q  18 ttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaa 117  Q
    ||||||||  |||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||||||||||||||    
T  31848105 ttttgccccatttctcctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctc--gaaaaaagagggggtgcaaaa 31848202  T
Q  118 tcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||| |||||||||||||||||| || |||||||||||||||||||    
T  31848203 tcgtacaattaacaaaagataggggagaaaagtgcaattaagcct 31848247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 22149534 - 22149401
Alignment:
Q  27 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaat 126  Q
    |||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||         |||||||||||||||||||||||    
T  22149534 ttttcctctcttttaatgatgattttgaacaaagcacaattgacaaaagatggggtgcaaaatcgctc-aaaaaaaagagggggtgcaaaatcgcacaat 22149436  T
Q  127 taacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    | || |||||||| |||||||||||||||||||||||    
T  22149435 t-accaaagatag-ggggaaaagtgcaattaagcctt 22149401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 47955396 - 47955304
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  47955396 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctt 47955304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 1176934 - 1176998
Alignment:
Q  29 ttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgct 93  Q
    ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  1176934 ttcccctcttttaataatgattttgaacaaaacacaattgacaaaagatggggtgcgaaatcgct 1176998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 13589656 - 13589714
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  13589656 gagggggtgcaaaatcgcacaattagcaaaagatag-ggggaaaagtgcaattaagcctt 13589714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 8108993 - 8109049
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  8108993 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctt 8109049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 39692000 - 39692056
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||    
T  39692000 ggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaagcctt 39692056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 46057102 - 46057182
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaac-aaaacacagttggcaaaagatggggtgcaaaatcgctc 94  Q
    |||||||||||  ||||||||||||||||||||||||||||| |||||||| |||||||||||  ||||| |||| |||||    
T  46057102 atcttttgccccctttcccctcttttaatgatgattttgaactaaaacacaattggcaaaagaaagggtgtaaaaccgctc 46057182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 22149701 - 22149755
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||| ||||    
T  22149701 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaaacctt 22149755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 49284499 - 49284407
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || ||||||||||||||||||||    
T  49284499 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctt 49284407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 68 - 158
Target Start/End: Complemental strand, 1176930 - 1176839
Alignment:
Q  68 ggcaaaagatggggtgcaaaatcgct-cnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||||||||| |         ||||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||    
T  1176930 ggcaaaagatggggtgcaaaatcgctacaaaaaaaaagagggggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaa 1176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 6002327 - 6002237
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||          | ||||||||||||| ||||||| ||||||||||| || ||||||||||||||||||    
T  6002327 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagcc 6002237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 17518599 - 17518653
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaag 159  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  17518599 gagggggtgcaaaatcgcacaattggcaaaagatag-ggggaaaagtgcaattaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 48190825 - 48190771
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  |||||||||| || ||||||||||||||||||    
T  48190825 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 48190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 20480221 - 20480166
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  20480221 ggggtgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaagcctt 20480166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 550 - 617
Target Start/End: Original strand, 479444 - 479511
Alignment:
Q  550 ttcttgtagcatctaaaattatgttgtcacaggaacttcatggtcggacagtacgagtgaactatgct 617  Q
    |||||||||||| ||||||| ||||||| ||||| | | |||||||||  ||||||||||||||||||    
T  479444 ttcttgtagcatttaaaattgtgttgtcgcaggatcctaatggtcggagggtacgagtgaactatgct 479511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 26815119 - 26815174
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||| | |||  |||| ||||||||||||||||||||||    
T  26815119 ggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcct 26815174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 28634157 - 28634208
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||||||||||    
T  28634157 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 28634208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 32163043 - 32163098
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  32163043 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 32163098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 44911079 - 44911024
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  ||||| |||| |||| |||||||||||||||||    
T  44911079 ggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagcct 44911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 48191355 - 48191410
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||| |||  |||||||||| || |||||||||||||||||||    
T  48191355 ggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagcct 48191410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 50615289 - 50615238
Alignment:
Q  112 gcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 50615238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 50623117 - 50623066
Alignment:
Q  112 gcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 50623066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 9347180 - 9347126
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  ||||  |||| |||||||||||||||||||||    
T  9347180 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 26814748 - 26814694
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||| |||||  |||| | |||||||||||||||||||    
T  26814748 ggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 26814694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 50429708 - 50429654
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||| ||||  ||| ||||||||||| ||||||||||||    
T  50429708 ggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaagcctt 50429654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 50615621 - 50615674
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||    
T  50615621 ggggtgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaagcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 50623449 - 50623502
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||    
T  50623449 ggggtgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaagcc 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 1177016 - 1177069
Alignment:
Q  105 agggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||| ||||||||| | |||||||| | ||||||||||||||||    
T  1177016 agggggtgcaaaattgcacaattagcgaaagatagggaggaaaagtgcaattaa 1177069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 41082966 - 41082909
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||| |||||||||||||||||  |||||||||| ||| |||||| ||||||||||    
T  41082966 gaggggatgcaaaatcgcacaattggcaaaagatagggggaaaaagtacaattaagcc 41082909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 48104732 - 48104676
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||  ||||  |||| |||||||||||||||||| ||||    
T  48104732 ggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaaacctt 48104676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 48313792 - 48313848
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||| ||||||||| |||||||||  ||| |||||| ||||||||||||    
T  48313792 ggggtgcaaaattgcacaattagcaaaagataatgggaaaaagtacaattaagcctt 48313848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 19008750 - 19008805
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||   |||  |||| ||||||||||||||||||||||    
T  19008750 ggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgcaattaagcct 19008805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 20371352 - 20371406
Alignment:
Q  106 gggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||  ||||  |||| |||||||||||||||||||||    
T  20371352 gggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 20371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 50430081 - 50430132
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  50430081 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 50430132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 1176766 - 1176717
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||| ||||| |||| |||| ||||||||||||||||    
T  1176766 tgcaaaatcgcacaattagcaaaatatag-gggggaaagtgcaattaagcc 1176717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 4692433 - 4692491
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttgt 165  Q
    |||||||||||| ||||||||  ||||  |||| ||| |||||||||||||||||||||    
T  4692433 ggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaagccttgt 4692491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 21687079 - 21687025
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||  ||||||| |||||  |||| |||||||||||||||||||||    
T  21687079 ggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaagcc 21687025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 27172169 - 27172116
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  ||||  |||| |||||||||||||||||||||    
T  27172169 ggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 27172116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 48105116 - 48105170
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  ||||  |||  |||||||||||||||||||||    
T  48105116 ggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaagcc 48105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 20480613 - 20480665
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||  ||||  |||| |||||||||||||||||||||    
T  20480613 gggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 20480665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 42611237 - 42611176
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttgtttctt 170  Q
    |||||||||||||||||||  ||||  |||  |||||||||||||||||| |||| ||||||    
T  42611237 ggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaaaccttatttctt 42611176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 42611616 - 42611665
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||| |||||  |||| || |||||||||||||||    
T  42611616 ggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaa 42611665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 47498495 - 47498547
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    ||||||||||| ||||||||| |||||  |||| ||||||||||||||||||||    
T  47498495 ggggtgcaaaaccgcacaattgacaaactatag-ggggaaaagtgcaattaagc 47498547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 999161 - 999110
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||||| ||||    
T  999161 tgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaaacctt 999110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 6002894 - 6002946
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaag 159  Q
    |||||||||||||||||||||   ||||||||| |  ||||||||||||||||    
T  6002894 ggggtgcaaaatcgcacaattgcgaaaagatagggatgaaaagtgcaattaag 6002946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 27172545 - 27172597
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||  ||||  | || |||||||||||||||||||||||    
T  27172545 tgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaagcctt 27172597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 31847945 - 31847893
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||| ||||||||| |||||||||  |||| ||||||||||||| ||||    
T  31847945 tgcaaaattgcacaattagcaaaagataagggggtaaagtgcaattaaacctt 31847893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 31848067 - 31848019
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaa-gatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||  ||||| ||||||||| ||||||||||||||    
T  31848067 tgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattaa 31848019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 33085725 - 33085669
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||  |||||| |||||| |||| | |||||||| ||||||||||||    
T  33085725 ggggtgcaaaatcaaacaattgacaaaatatagggtggaaaagtacaattaagcctt 33085669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 46056953 - 46056904
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    |||||||||||||| ||||| ||||||||  ||||| |||||||||||||||    
T  46056953 ggtgcaaaatcgcaaaattagcaaaagat--agggggaaagtgcaattaagc 46056904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 46823894 - 46823846
Alignment:
Q  110 gtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  46823894 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 46823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 50526472 - 50526524
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaag 159  Q
    |||||||||||||||||||||  ||||  |||| ||| |||||||||||||||    
T  50526472 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 2e-51; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 30191133 - 30191279
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||||||||    
T  30191133 atcttttgccctttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgca 30191232  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  30191233 aaatcgcacaattaataaaagataggggggaaaagtgcaattaagcc 30191279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 20347309 - 20347162
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    ||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||         || |||||||    
T  20347309 catcttttgccccatttcccctcttttaacgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaaga-ggggtgc 20347211  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20347210 aaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaagcct 20347162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 11883834 - 11883980
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||         |||||||||||    
T  11883834 atctttagccccttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggagtgcaaaatcgctcaaaaaaaaagagggggtgca 11883933  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||    
T  11883934 aaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 32672988 - 32672842
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||| |||||||    
T  32672988 atcttttgccccttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagagggtgca 32672889  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||  |   |||||||||||||||||    
T  32672888 aaatcgcacaattaacaaaagataaggaacaaaagtgcaattaagcc 32672842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 6171301 - 6171156
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||          |   ||||||    
T  6171301 atcttttgccccttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcactcaaaaaaaaaaaaaaggtgca 6171202  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  6171201 aaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcc 6171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 17345943 - 17346089
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||         |||| ||||||    
T  17345943 atctttagcccattttcctctcttttaatgatgattttgaacaaaacacaattggcaaaatatgggatgcaaaatcgctcaaaaataaagaggaggtgca 17346042  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||| ||||||||| | || ||||||||||||||||||    
T  17346043 aaatcgcacaattagcaaaagata-aaggaaaaagtgcaattaagcct 17346089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 40469573 - 40469427
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||| |||| |||||| || |||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||         |||||||||||    
T  40469573 atctttagccccttttcctctattttaatgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgca 40469474  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||| ||||||||||  ||||||| | ||||||||||    
T  40469473 aaatcgcacaattagcaaaagataggagggaaaaatacaattaagcc 40469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 26737606 - 26737480
Alignment:
Q  34 ctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaa 133  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |          ||||||||||||||||||||||||| ||||    
T  26737606 ctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcg-ttaaaaaaaaagagggggtgcaaaatcgcacaattagcaaa 26737508  T
Q  134 agatagaggggaaaagtgcaattaagcctt 163  Q
    ||||  ||| ||||||||||||||||||||    
T  26737507 agat--aggagaaaagtgcaattaagcctt 26737480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 43495439 - 43495307
Alignment:
Q  29 ttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatta 128  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||          |||||| || |||||||||||||||    
T  43495439 ttcccctcttttaatgatgattttgaacaaaacacaattggcaaaatatgaggtgcaaaatcgct--aaaaaaaagaggggatgaaaaatcgcacaatta 43495342  T
Q  129 acaaaagatagaggggaaaagtgcaattaagcctt 163  Q
     ||||| ||||  ||||||||||||||||||||||    
T  43495341 gcaaaatataggtgggaaaagtgcaattaagcctt 43495307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 15920890 - 15920781
Alignment:
Q  48 attttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaa 147  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||         ||||||||||||||||||||||||||||||||||||  ||||||    
T  15920890 attttgaacaaaacacaattggcaaaagatggggtgcaaaattgctcaaaaaaaa-gagggggtgcaaaatcgcacaattaacaaaagataggagggaaa 15920792  T
Q  148 agtgcaattaa 158  Q
    |||| ||||||    
T  15920791 agtgaaattaa 15920781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 6495646 - 6495777
Alignment:
Q  31 cccctcttttaatgatgattttgaacaaaa-cacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaa 129  Q
    |||||| ||||||||||||||||||||||| | || |||||||||||||  ||||||||||||||          ||| ||||||||||||||||||| |    
T  6495646 cccctcatttaatgatgattttgaacaaaaacgcaattggcaaaagatgacgtgcaaaatcgctcaaaaaaaa--aggaggtgcaaaatcgcacaattca 6495743  T
Q  130 caaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||| | |||||||||||||||||||||    
T  6495744 caaaagatagggaggaaaagtgcaattaagcctt 6495777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 15321610 - 15321676
Alignment:
Q  28 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc 94  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  15321610 tttcccctcttttaatgatgattttgaacaaaacacaattgataaaagatggggtgcaaaatcgctc 15321676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 24832421 - 24832329
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||         || |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  24832421 aaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctt 24832329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 30191013 - 30190909
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttgtttctt 170  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||  ||| ||    
T  30191013 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctattttttt 30190914  T
Q  171 tgaca 175  Q
    |||||    
T  30190913 tgaca 30190909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 11883680 - 11883621
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  11883680 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctt 11883621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 40221459 - 40221313
Alignment:
Q  13 tcatcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagat-ggggtgcaaaatcgctcnnnnnnnnngagggggt 111  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||||| ||| |||||||| |||||||||||| |||          || | |||    
T  40221459 tcatcttttgcccctttccccctcttttaatgatgattttgaacgaaacacaattgacaaaagatgggggtgcaaaattgct-aaaaaaaaaga-gaggt 40221362  T
Q  112 gcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||| ||||||| |||||||||| ||||||| |||||||||||||    
T  40221361 gcaaaatcgaacaattagcaaaagatag-ggggaaaggtgcaattaagcc 40221313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 18055265 - 18055330
Alignment:
Q  28 tttcccctcttttaatgatgattttgaaca-aaacacagttggcaaaagatggggtgcaaaatcgc 92  Q
    |||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  18055265 tttcccctcttttaatgatgattttgaagacaaacacaattggcaaaagatggggtgcaaaatcgc 18055330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 20347428 - 20347520
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||| |||         ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  20347428 aaaagatggggtgcaaaatccctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctt 20347520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 40469693 - 40469785
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||    
T  40469693 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaaacctt 40469785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 18296693 - 18296753
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttgttt 167  Q
    |||||||||||||||||||||  |||||||||| || ||||||||||||||||||||||||    
T  18296693 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccttgttt 18296753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 29230334 - 29230281
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  29230334 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaagcct 29230281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 2639446 - 2639537
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || |||||||||||||||||||    
T  2639446 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 2639537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 6171456 - 6171512
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||| |||||||  |||||||||| |||||||||||||||||||||||    
T  6171456 ggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaagcctt 6171512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 8851582 - 8851638
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  8851582 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 8851638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 26841677 - 26841586
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || |||||||||||||||||||    
T  26841677 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 26841586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 18055316 - 18055367
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  18055316 ggggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaa 18055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 15321480 - 15321394
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaag 159  Q
    ||||||||||||||||||||||||          ||||| |||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  15321480 aaaagatggggtgcaaaatcgctcaaaataaaataggggatgcaaaattgcacaattaacaaaagat--aggggaaaagtgcaattaag 15321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 26737781 - 26737835
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||| ||| |||||||||| || ||||||||||||||||||    
T  26737781 ggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaattaagcc 26737835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 2638910 - 2638818
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || ||||| ||||||||||||||    
T  2638910 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcctt 2638818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 29343633 - 29343584
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  29343633 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaa 29343584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 32673107 - 32673198
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||          |||||||||||||||||||||||  |||||||||| ||| |||||||||||||| ||||    
T  32673107 aaaagatggggtgcaaaatcgctcaaaaaaaaatagggggtgcaaaatcgcacaattggcaaaagatag-gggaaaaagtgcaattaaacctt 32673198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 6495519 - 6495468
Alignment:
Q  108 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  6495519 gggtgcaaaatcgcacaattaac-aaagatagggaggaaaagtgcaattaagc 6495468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 26692450 - 26692394
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||| ||||    
T  26692450 ggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaaacctt 26692394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 37720258 - 37720202
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||  ||||  |||| |||||||||||||||||||||||    
T  37720258 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctt 37720202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 5378715 - 5378660
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  5378715 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 5378660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 7664302 - 7664247
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    ||||||||||||||||||||| | |||  |||| ||||||||||||||||||||||    
T  7664302 ggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcct 7664247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 18055103 - 18055050
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaag 159  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  18055103 gagggggtgcaaaatcgcacaattagcaaaag-tag-ggggaaaagtgcaattaag 18055050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 26692820 - 26692871
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  26692820 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 26692871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 26842202 - 26842292
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || |||||||||| |||||||    
T  26842202 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaagcc 26842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 41790912 - 41790967
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||| ||||||||||||||||  ||||| |||| ||||||||||||||||||||||    
T  41790912 ggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagcct 41790967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 43495481 - 43495535
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaac-aaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  43495481 gagggggtgcaaaatcgcacaattgacaaaaagatag-ggggaaaagtgcaattaa 43495535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 7664673 - 7664727
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||| |||||  |||| | |||||||||||||||||||    
T  7664673 ggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 7664727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 17851032 - 17850978
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  ||||  |||| |||||||||||||||||||||    
T  17851032 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 17850978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 18296166 - 18296077
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || ||||||| |||||||||    
T  18296166 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaagc 18296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 7980003 - 7980059
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttg 164  Q
    |||||||||||||||||||||| ||||  ||||| || ||||||||||||||||||||    
T  7980003 ggggtgcaaaatcgcacaattagcaaactataga-ggaaaaagtgcaattaagccttg 7980059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 7591291 - 7591204
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || ||||||| |||||||    
T  7591291 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 8851202 - 8851146
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||  ||||  |||| |||||||||||||||||| ||||    
T  8851202 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacctt 8851146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 5379959 - 5380014
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||||||||||||||||||||   |||  |||| ||||||||||||||||||||||    
T  5379959 ggggtgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaagcct 5380014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 17345788 - 17345736
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    ||||||||||||||| ||| ||||| ||||||||  |||||||||||||||||||    
T  17345788 gagggggtgcaaaattgcataattagcaaaagat--aggggaaaagtgcaattaa 17345736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 7591850 - 7591904
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||| |||||||||||  | ||||  ||||||||||||    
T  7591850 ggggtgcaaaatcgcacaattgacaaaagataggagtgaaagatgcaattaagcc 7591904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 43495570 - 43495658
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||         |||||| |||||||||||||||||| ||||| |||| | || ||||||||||||||||    
T  43495570 aaaagatggggtgcaaaatcgctcaaaaaaaa-gaggggatgcaaaatcgcacaattagcaaaatatag-gtgggaaagtgcaattaagcc 43495658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 6171334 - 6171383
Alignment:
Q  108 gggtgcaaaatcgcacaattaac-aaaagatagaggggaaaagtgcaatt 156  Q
    ||||||||||||||||||||||| ||||||||  ||| ||||||||||||    
T  6171334 gggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaatt 6171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 17345912 - 17345859
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaac-aaaagatagaggggaaaagtgcaatt 156  Q
    ||||||||| ||||||||||||||||| |||| |||| ||| ||||||||||||    
T  17345912 gagggggtgaaaaatcgcacaattaacaaaaatatagggggcaaaagtgcaatt 17345859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 18750126 - 18750178
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    ||||||||||||||||||||| |||||  |||| ||||| ||||||||||||||    
T  18750126 ggggtgcaaaatcgcacaattgacaaactatag-ggggagaagtgcaattaagc 18750178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 26737657 - 26737706
Alignment:
Q  108 gggtgcaaaatcgcacaattaac-aaaagatagaggggaaaagtgcaatt 156  Q
    ||||||||||||||||||||| | ||||||||| ||| ||||||||||||    
T  26737657 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 26737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 40469607 - 40469655
Alignment:
Q  109 ggtgcaaaatcgcacaattaacaaaa-gatagaggggaaaagtgcaatt 156  Q
    |||||||||||||||||||| ||||| ||||  ||||||||||||||||    
T  40469607 ggtgcaaaatcgcacaattagcaaaacgataagggggaaaagtgcaatt 40469655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 96; Significance: 1e-46; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 1264 - 1118
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||         |||||||||||    
T  1264 atcttttgcccttttccccctcttttaatgatgattttgaacaaaacacaattggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgca 1165  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  1164 aaatcgcacaattaacaaaagatagggggaaaaagtgcaattaagcc 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 1384 - 1474
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||  |||||||||| ||| |||||||||||||||||    
T  1384 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 6529 - 6392
Alignment:
Q  27 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgct-cnnnnnnnnngagggggtgcaaaatcgcacaa 125  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||           ||||||||||||||||||||||    
T  6529 ttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctaaaaaaaaaaagagggggtgcaaaatcgcacaa 6430  T
Q  126 ttaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||| |||||||||| |||||||||||||||||||||||    
T  6429 ttagcaaaagataggggggaaaagtgcaattaagcctt 6392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 6661 - 6750
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  6661 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatag-ggggaaaagtgcaattaagcc 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 1694 - 1834
Alignment:
Q  18 ttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc-nnnnnnnnngagggggtgcaaa 116  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||          |||| ||||||||    
T  1694 ttttgccccatttcccctcttttaatgatgattttaaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaagaaaagaggaggtgcaaa 1793  T
Q  117 atcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  1794 atcgcacaataaacaaaagatag-ggggaaaagtgcaattaa 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 1564 - 1511
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||| |||||||  ||||||||||| || |||||||||||||||||    
T  1564 ggggtgcaaaatcacacaattggcaaaagataga-ggaaaaagtgcaattaagcc 1511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 6751 - 6609
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    ||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||   |||||    
T  6751 catctcttgcccctttccccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctaaaaaaaagaga---ggtgc 6655  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaag 159  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||    
T  6654 aaaatcacacaattaacaaaagataggggggaacagtgcaattaag 6609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 73; Significance: 5e-33; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 17063 - 17209
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc-nnnnnnnnngagggggtgc 113  Q
    |||||| |||| |||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||          |||| |||||    
T  17063 atctttagccccttttcctctcttttaaggatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaaaaaaagaggcggtgc 17162  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  17163 aaaattgcacaattagcaaaagatag-ggggaaaagtgcaattaagcc 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 16908 - 16853
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||| ||||||||||||| ||||||||  |||||||||  |||||||||||    
T  16908 gagggggtgcataatcgcacaattagcaaaagat--aggggaaaaaggcaattaagcc 16853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 73; Significance: 5e-33; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 183509 - 183367
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgca 114  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||         ||| |||||||    
T  183509 atcttttgccccccttcccctcttttaatgatgattttgaacaaaacacaattggcaaaatatgaggtgcaaaatcgctcaaaaaagaagagagggtgca 183410  T
Q  115 aaatcgcacaattaacaaaagatagaggggaaaagtgcaattaa 158  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||    
T  183409 aaatcgtacaattgacaaaagatag-ggggaaaagtgcaattaa 183367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 439121 - 439254
Alignment:
Q  27 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaat 126  Q
    |||||| |||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||         |||||| ||||||||||||||||    
T  439121 ttttcctctcttttaatgatgattttgaagaaaacacaattgacaaaagatggggtgcaaaatcgctc--aaaaaaagaggggatgcaaaatcgcacaat 439218  T
Q  127 taacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    || |||||||||  ||| ||||||||||||||||||    
T  439219 tagcaaaagataaggggaaaaagtgcaattaagcct 439254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 439019 - 438930
Alignment:
Q  72 aaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||||         ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  439019 aaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 183660 - 183718
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||    
T  183660 gagggggtgcaaa-tcgcacaattagcaaaatataggggggaaaagtgcaattaagcctt 183718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 205831 - 205685
Alignment:
Q  14 catcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgc 113  Q
    ||||||||||||  ||||||||||||| || |||||||||||||||||||| ||||||||||||| |||||||||||| ||         ||||||||||    
T  205831 catcttttgccccatttcccctcttttgattatgattttgaacaaaacacaattggcaaaagatgaggtgcaaaatcgttc--aaaaaaagagggggtgc 205734  T
Q  114 aaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||| |||||||||| || ||||| ||||||||||||||    
T  205733 aaaatcgcacaattagcaaaagatag-ggagaaaaatgcaattaagcctt 205685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 25213 - 25134
Alignment:
Q  15 atcttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc 94  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  25213 atctttagccccttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctc 25134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 25333 - 25425
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  25333 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctt 25425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 10756 - 10690
Alignment:
Q  28 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgctc 94  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10756 tttcccatcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctc 10690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 55; Significance: 3e-22; HSPs: 3)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 7568 - 7494
Alignment:
Q  18 ttttgcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatggggtgcaaaatcgc 92  Q
    ||||||||  |||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  7568 ttttgccccatttctcctcttttaatgatgattttgaacaaaacacaattggcaaacgatggggtgcaaaatcgc 7494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 7508 - 7452
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagccttg 164  Q
    |||||||||||||||| ||||| |||||||||| ||| ||||||||||||||||||||    
T  7508 ggggtgcaaaatcgcataattagcaaaagatag-gggaaaaagtgcaattaagccttg 7452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 7597 - 7653
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||| |||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  7597 gagggggtacaaaatcgcacaattagcaaaagatag-gggaaaaagtgcaattaagcc 7653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 6242 - 6152
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||          | |||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  6242 aaaagatggggtgcaaaatcgctcatttaaaaatatggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaagcc 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 6759 - 6849
Alignment:
Q  71 aaaagatggggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  |||||||||| || ||||| ||||||||||||    
T  6759 aaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 411979 - 411923
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||    
T  411979 gagggggtgcaaaatcgcacaattgacaaaagatag-ggggtaaagtgcaattaagcc 411923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 380 - 328
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  380 tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 73023 - 72967
Alignment:
Q  104 gagggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    |||| |||||||||| ||||||||| ||||||||| ||||||||| |||||||||||    
T  73023 gaggcggtgcaaaattgcacaattagcaaaagataaaggggaaaaatgcaattaagc 72967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 10062 - 10010
Alignment:
Q  111 tgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||| ||||||  |||||||||| ||| |||||||||||||||||||    
T  10062 tgcaaaatcgtacaattggcaaaagatagggggcaaaagtgcaattaagcctt 10010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 38695 - 38751
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    |||||||||||||||||||||  ||||  |||| ||| |||||||||||||||||||    
T  38695 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcctt 38751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 20043 - 20098
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcct 162  Q
    |||| |||||||||||||||| |||||  |||  ||||||||||||||||||||||    
T  20043 ggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagcct 20098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 50506 - 50560
Alignment:
Q  106 gggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    ||||||||||||||||||||||  ||||  |||| |||||||||||||||||||||    
T  50506 gggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 50560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 185274 - 185328
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcc 161  Q
    |||||||||||||||||||||  ||||  |||| | |||||||||||||||||||    
T  185274 ggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagcc 185328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 184893 - 184840
Alignment:
Q  107 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagc 160  Q
    |||||||||||| ||||| || |||||  ||||||| |||||||||||||||||    
T  184893 ggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaattaagc 184840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 9960 - 9903
Alignment:
Q  106 gggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgcaattaagcctt 163  Q
    ||||||| ||||||||||||||  ||||  |||| ||| |||||||||||||||||||    
T  9960 gggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcctt 9903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University