View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3704_1D_low_44 (Length: 208)
Name: NF3704_1D_low_44
Description: NF3704_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3704_1D_low_44 |
 | |
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| [»] chr3 (5 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
| | |
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| [»] scaffold0319 (1 HSPs) |
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| [»] scaffold0016 (2 HSPs) |
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| [»] scaffold0130 (1 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0108 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0282 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] scaffold0656 (1 HSPs) |
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| [»] scaffold0019 (1 HSPs) |
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| [»] scaffold0107 (1 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0013 (4 HSPs) |
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| [»] scaffold0362 (1 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 1735501 - 1735317
Alignment:
| Q |
2 |
tggacatcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctt |
101 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
1735501 |
tggacatcgtattccacaggcaagatggaaaccacattacagactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcgtcttctt |
1735402 |
T |
|
| Q |
102 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctg |
186 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
1735401 |
ttgaatgatctttcttcagaattgacaatgggggtgaaattcgttctgttgctggcttcttaaccatctcgaacacagctttctg |
1735317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 2 - 206
Target Start/End: Original strand, 17422845 - 17423049
Alignment:
| Q |
2 |
tggacatcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctt |
101 |
Q |
| |
|
|||||||| ||||||||||| | ||| ||||||||||||||||||||||| || || ||||||||| |||||||||| ||||||||||||||||| |||| |
|
|
| T |
17422845 |
tggacatcgtattccacaggtaggatagaaaccacattgcaaactatgtcgaggctcgggtcagatcccgtgaaattcgaagtcatctcctcatcctctt |
17422944 |
T |
|
| Q |
102 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgtttt |
201 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |
|
|
| T |
17422945 |
tgggatgatctttcttcaagattgacaatgggggtgagattctctctgttgctggtttcttaaccatttcgaacacctctttctgcttatcctccgtttt |
17423044 |
T |
|
| Q |
202 |
gtcaa |
206 |
Q |
| |
|
||||| |
|
|
| T |
17423045 |
gtcaa |
17423049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 22348764 - 22348945
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
|||| |||||| | ||| |||||||||||||| || || |||||||| ||||||||| | |||||||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
22348764 |
tatttcacaggtaggatcgaaaccacattgcatacgatatcaagactggggtcagatccaatgaaatttgaagtcatttcttcatcctctttgggatgat |
22348863 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgcc |
192 |
Q |
| |
|
||||||| | |||||||||||||||||| |||| |||| |||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
22348864 |
ctttctttaaaattgacaatgggggtgagattctctctattgctggttttttaaccatttcgaacacaactttctgcttgcc |
22348945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 208
Target Start/End: Original strand, 14693217 - 14693423
Alignment:
| Q |
2 |
tggacatcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctt |
101 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
14693217 |
tggacatcgtattccacaggcaagatagaaaccacattgcaaactatgtcgaggtttgggtcagattccgtgaaatttgaagtcatctccttatcctctt |
14693316 |
T |
|
| Q |
102 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgtttt |
201 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||| |||| ||||| |
|
|
| T |
14693317 |
tggaatggtctttcttcaagattgacaatgggggtgaaattctctctgttgctggttttttaaccatttcgaacacggctttctgcttgtcctccgtttt |
14693416 |
T |
|
| Q |
202 |
gtcaata |
208 |
Q |
| |
|
||||||| |
|
|
| T |
14693417 |
gtcaata |
14693423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 10782360 - 10782167
Alignment:
| Q |
2 |
tggacatcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctt |
101 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| |
|
|
| T |
10782360 |
tggacatcatattccacaggcaaaatggaaaccacattacaaactatgtcaagacttgggtcagattctgtgaaattcgaagtcatttcctcatcttctt |
10782261 |
T |
|
| Q |
102 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc |
195 |
Q |
| |
|
| | |||||||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||||| || |||||||||||||||||| |||| |
|
|
| T |
10782260 |
ttggatgatctttcatcagaatcgacaatgggggcgaaattcgctctgttgctggcttcttaaccatctcaaacacagctttctgcttgtcctc |
10782167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 7401977 - 7402182
Alignment:
| Q |
2 |
tggacatcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctt |
101 |
Q |
| |
|
|||||||| |||||| |||||| ||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
7401977 |
tggacatcgtattcctcaggcaggattgaaaccacattgcaaactatgtcgagactcgggtcacattccgtgaaatttgaagtcatctcctcatcctctt |
7402076 |
T |
|
| Q |
102 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgtttt |
201 |
Q |
| |
|
||||| || ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| || |||| |||| |
|
|
| T |
7402077 |
tggaacaatacttcttcaaaattgacaatgggggtgaaattctttctgttgctgccttcttaaccatttcgaacacagctttctgtttatcctccatttt |
7402176 |
T |
|
| Q |
202 |
gtcaat |
207 |
Q |
| |
|
|||||| |
|
|
| T |
7402177 |
gtcaat |
7402182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 189
Target Start/End: Original strand, 13306870 - 13307054
Alignment:
| Q |
5 |
acatcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttgg |
104 |
Q |
| |
|
||||| |||||||| || | ||| |||||||||||||||||||| || ||||| ||||||||| |||||||||| |||||||| || ||||| ||||||| |
|
|
| T |
13306870 |
acatcgtattccaccggtaggatagaaaccacattgcaaactatatcgagactagggtcagatcccgtgaaattcgaagtcatatcttcatcctctttgg |
13306969 |
T |
|
| Q |
105 |
aatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgctt |
189 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13306970 |
gatgatctttcttcaaaattgacaatgggggtgagattctctctgttgctggtttcttaaccatttcgaacacagttttctgctt |
13307054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 10150985 - 10150787
Alignment:
| Q |
8 |
tcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaat |
107 |
Q |
| |
|
|||||||||||||| | || |||||||||||||| |||||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| || |
|
|
| T |
10150985 |
tcatattccacaggtagtatagaaaccacattgcatactatgtcaagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggat |
10150886 |
T |
|
| Q |
108 |
gatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaa |
206 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||| |||||| ||||||| |||||||||||||||||| |||| ||||||||||| |||||||| |
|
|
| T |
10150885 |
gatctttcttcaaaattgacaatgggggtgagattctctctgtgactggttttttaaccatttcgaacacatcttttcgcttgccctctcctttgtcaa |
10150787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 138; Significance: 2e-72; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 14342647 - 14342852
Alignment:
| Q |
2 |
tggacatcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctt |
101 |
Q |
| |
|
|||||||| ||||||||||||| ||| ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14342647 |
tggacatcgtattccacaggcaggattgaaaccacattgcaaactatgtcgaggctcgggtcagattccgtgaaatttgaagtcatctcctcatcctctt |
14342746 |
T |
|
| Q |
102 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgtttt |
201 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
14342747 |
tggaacaatctttcttcaaaattgacaatgggggtgaaattctttttgttgctggtttcttaaccatttcgaacacagctttctgcttatcctccgtttg |
14342846 |
T |
|
| Q |
202 |
gtcaat |
207 |
Q |
| |
|
|||||| |
|
|
| T |
14342847 |
gtcaat |
14342852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 18133578 - 18133732
Alignment:
| Q |
54 |
gacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgc |
153 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18133578 |
gacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaacgatctttcttcagaattgacaatgggggtgaaattcgctctgttgc |
18133677 |
T |
|
| Q |
154 |
tggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaata |
208 |
Q |
| |
|
||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||| |
|
|
| T |
18133678 |
tggtttcttaaccatctcgaacacaactttttgcttgccctcccttttgtcaata |
18133732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 29 - 206
Target Start/End: Original strand, 18171652 - 18171829
Alignment:
| Q |
29 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
128 |
Q |
| |
|
|||||||||||| | |||||||| ||||| ||||||||| | |||||||| |||||||| || ||||| || |||| |||||||||||||| ||||||| |
|
|
| T |
18171652 |
gaaaccacattgtacactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaagattgaca |
18171751 |
T |
|
| Q |
129 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaa |
206 |
Q |
| |
|
||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
18171752 |
atgggggcgaaattctttctgttgctggttttttaaccatttcgaacacagctttctgcttaccctctcctttgtcaa |
18171829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 11558 - 11360
Alignment:
| Q |
8 |
tcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaat |
107 |
Q |
| |
|
|||||||||| ||| | ||| |||||||||||||| ||||||| ||||| ||||||||||| ||||||||||||||||| || ||||| ||||||| || |
|
|
| T |
11558 |
tcatattccataggtaggatagaaaccacattgcatactatgttgagactagggtcagattcagtgaaatttgaagtcatttcttcatcctctttgggat |
11459 |
T |
|
| Q |
108 |
gatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaa |
206 |
Q |
| |
|
|||||||||| | ||||||||||||||| || |||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
11458 |
gatctttctttaaaattgacaatgggggcgagattctctctgttgctggttttttaaccatttcgaacacagctttctgcttaccctctgttttgtcaa |
11360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 116; Significance: 3e-59; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 23200629 - 23200824
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
|||||||| || | ||| |||||||||||||| ||||| || ||||| ||||||||| |||||||||| |||||||| || ||||| ||||||| ||||| |
|
|
| T |
23200629 |
tattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcctctttgggatgat |
23200728 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
23200729 |
ctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcgaacacagccttctgcttaccctctgttttgtcaa |
23200824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 22638512 - 22638317
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
|||||||| || | ||| |||||||||||||| |||||||| ||||| ||||||||| | |||||||| |||||||| || ||||| ||||||| ||||| |
|
|
| T |
22638512 |
tattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctctttgggatgat |
22638413 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||| |
|
|
| T |
22638412 |
ctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcgaacacagccttctgcttaccctctgttttatcaa |
22638317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 23626258 - 23626453
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
|||||||| || | ||| |||||||||||||| |||||||| ||||| ||||||||| | |||||||| |||||||| || |||| || |||| ||||| |
|
|
| T |
23626258 |
tattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagatccagtgaaattcgaagtcatttctacatcctccttgggatgat |
23626357 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaa |
206 |
Q |
| |
|
|||| |||| |||||||||||||| || |||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
23626358 |
cttttttcaatattgacaatgggggcgagattctctctgttgctggtttcttaaccattttgaacacagctttctgcttaccctctgttttgtcaa |
23626453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 32 - 189
Target Start/End: Complemental strand, 24912070 - 24911914
Alignment:
| Q |
32 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatg |
131 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| ||| || ||||| | |||||||| | |
|
|
| T |
24912070 |
accacattgcatactatgtcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatggtccttctttaagattgacaa-g |
24911972 |
T |
|
| Q |
132 |
ggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgctt |
189 |
Q |
| |
|
|||||||||||| || |||||||||||| |||||||||||||| |||||| ||||||| |
|
|
| T |
24911971 |
ggggtgaaattctctttgttgctggttttttaaccatttcgaaaacagctctctgctt |
24911914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 9834 - 9639
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
||||||||||| | ||| |||||||||||||| |||||||| ||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| ||| | |
|
|
| T |
9834 |
tattccacaggtaggatagaaaccacattgcatactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgtt |
9735 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaa |
206 |
Q |
| |
|
||||||| | |||||||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
9734 |
ctttctttaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatttcgaacacagctttctgcttaccctctcctttgtcaa |
9639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 126559 - 126754
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
|||||||| || | ||| |||||||||||||| ||||| || ||||| ||||||||| | |||||||| |||||||| || ||||| ||||||| ||||| |
|
|
| T |
126559 |
tattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctctttgggatgat |
126658 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaa |
206 |
Q |
| |
|
||||||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||| |
|
|
| T |
126659 |
ctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcgaacacagccttctgcttaccctctgttttatcaa |
126754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 179311 - 179447
Alignment:
| Q |
32 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatg |
131 |
Q |
| |
|
||||||||||| ||||| || | ||||||||||| | | |||||| || ||||| || ||||| ||||| | ||| |||||||||| ||||||||| | |
|
|
| T |
179311 |
accacattgcacactatatcgaagcttgggtcagacttggagaaattcgacgtcatttcttcatcctctttaggatggtctttcttcaaaattgacaaag |
179410 |
T |
|
| Q |
132 |
ggggtgaaattcgctctgttgctggtttcttaaccat |
168 |
Q |
| |
|
| || || |||| ||||| |||| ||| |||||||| |
|
|
| T |
179411 |
gaggggagattctttctgtggctgattttttaaccat |
179447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 23 - 206
Target Start/End: Complemental strand, 23435287 - 23435104
Alignment:
| Q |
23 |
aagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaa |
122 |
Q |
| |
|
||||| |||||||||||||| |||||||| ||||| ||||||||| |||||||||| |||||||| || ||||| || |||| |||||||||||||| || |
|
|
| T |
23435287 |
aagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaaa |
23435188 |
T |
|
| Q |
123 |
ttgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaa |
206 |
Q |
| |
|
||||||||||||| || |||| |||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||| |
|
|
| T |
23435187 |
ttgacaatgggggcgagattctctctattgctggtttcttaaccatttcgaacacaaccttctgcttaccctctgttttgtcaa |
23435104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 19035178 - 19035373
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
||||||||||| | ||| || ||||||||||| | || |||||||| ||||||||| | |||||||| |||||||| || ||||| | ||||| || || |
|
|
| T |
19035178 |
tattccacaggtaggatcgagaccacattgcatataatatcaagactggggtcagatccagtgaaattcgaagtcatttcttcatcctttttgggattat |
19035277 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaa |
206 |
Q |
| |
|
|||||||| |||||||||||| | ||| |||| ||||||||||||||| ||||| |||||||||| |||||| |||||||||||| |||||||| |
|
|
| T |
19035278 |
ttttcttcaaaattgacaatggagatgagattctctctgttgctggttttttaactatttcgaacatagctttttgcttgccctctcctttgtcaa |
19035373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 29 - 206
Target Start/End: Complemental strand, 43321 - 43144
Alignment:
| Q |
29 |
gaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
128 |
Q |
| |
|
|||||||||||||| |||||||| ||||| ||||||||| |||||||||| ||||||| || ||||| || |||| |||||||||||||| |||||||| |
|
|
| T |
43321 |
gaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcagttcttcatcctccttgggatgatctttcttcaaaattgaca |
43222 |
T |
|
| Q |
129 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaa |
206 |
Q |
| |
|
||||||| || |||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||| |
|
|
| T |
43221 |
atgggggcgagattctctctgttgctggtttcttaaccattttgaacacagctttctgcttaccctctgttttatcaa |
43144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 8 - 206
Target Start/End: Original strand, 13289364 - 13289562
Alignment:
| Q |
8 |
tcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaat |
107 |
Q |
| |
|
|||||||||| ||| | ||| |||||||||||||| |||||||| ||||| ||||||||| | |||||||| |||||||| || ||||| ||||||| || |
|
|
| T |
13289364 |
tcatattccaaaggtaggatagaaaccacattgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctctttgggat |
13289463 |
T |
|
| Q |
108 |
gatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaa |
206 |
Q |
| |
|
|||||||||| | ||||||||||||||| || |||| |||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
13289464 |
gatctttctttaaaattgacaatgggggcgagattctctctgttgctggctttttaaccatttcgaacacagctttctgcttaccctctcctttgtcaa |
13289562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 14772567 - 14772742
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
||||||||||| | ||| || ||||||||||| ||||| || ||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
14772567 |
tattccacaggtaggatcgagaccacattgcatactatatcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat |
14772666 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctg |
186 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| ||||||||||||||| |||||||||||||| |||||| |||| |
|
|
| T |
14772667 |
ctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaatacagctctctg |
14772742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 11668 - 11493
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
||||||||||| | ||| || ||||||||||| || || |||||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
11668 |
tattccacaggtaggattgagaccacattgcatacgatatcaagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat |
11569 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctg |
186 |
Q |
| |
|
||||||| | |||||||||||||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
11568 |
ctttctttataattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaatacagctttctg |
11493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 126760 - 126943
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
||||||||||| | ||| || ||||||||||| || || |||||||| ||||||||| ||||||||||||||||||| || ||||| || |||| ||||| |
|
|
| T |
126760 |
tattccacaggtaggatcgagaccacattgcatacgatatcaagactggggtcagatcccgtgaaatttgaagtcatttcttcatcctcattgggatgat |
126859 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccct |
194 |
Q |
| |
|
||||||| | |||| ||||||||||||| |||| |||||||| |||||| ||||||||||||||||| ||||||||||| |||| |
|
|
| T |
126860 |
ctttctttaaaattcacaatgggggtgagattctctctgttgttggttttttaaccatttcgaacaccgctttctgctttccct |
126943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 21511184 - 21511006
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
||||||||| | ||||| || ||||||||||| | || |||||||| ||||||||| | ||||||||||||||||| || ||||| || |||| ||||| |
|
|
| T |
21511184 |
tattccacaagtaagatcgagaccacattgcatatgatatcaagactggggtcagatccagtgaaatttgaagtcatttcttcatcctccttgggatgat |
21511085 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgctt |
189 |
Q |
| |
|
||||||| | |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
21511084 |
ctttctttaaaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaacaccgctttctgctt |
21511006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 22805838 - 22806016
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
||||||||||| | ||| || ||||||||||| ||||| || ||| | ||||||||| | ||||||||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
22805838 |
tattccacaggtaggattgagaccacattgcatactatatcgagattggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat |
22805937 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgctt |
189 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||||| || |||||| ||||||| |
|
|
| T |
22805938 |
ctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcaaatacagctctctgctt |
22806016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 41380414 - 41380507
Alignment:
| Q |
102 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc |
195 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
41380414 |
tggaatgatctttcttcaaaattgacaatgggggtgaaattcgctctgttgctggcttcttaaccatctcgaacacagctttctgcttgccctc |
41380507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 208
Target Start/End: Complemental strand, 29816 - 29619
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
|||||||| || | ||| |||||||||||||| |||||||| || || ||||||||| | ||||||| ||| ||||| || ||||| ||||||| ||||| |
|
|
| T |
29816 |
tattccactggtaggatagaaaccacattgcatactatgtctaggctggggtcagatccggtgaaatctgaggtcatttcttcatcctctttgggatgat |
29717 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctgttttgtcaata |
208 |
Q |
| |
|
||||||||| ||||||||| |||||||| |||| |||| | |||||||| |||||||||||||||||| |||| |||||||||| | ||||||||||| |
|
|
| T |
29716 |
ctttcttcaaaattgacaacgggggtgagattctctctatggctggttttttaaccatttcgaacacatctttttgcttgccctttcttttgtcaata |
29619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 26405 - 26227
Alignment:
| Q |
8 |
tcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaat |
107 |
Q |
| |
|
|||||||||||||| | |||||| ||||| ||||| |||||||| ||||| ||||||||| | |||||||| ||||||||||| ||||| || ||| | |
|
|
| T |
26405 |
tcatattccacaggtaggatggacaccacgttgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatctcttcatcctccttgagag |
26306 |
T |
|
| Q |
108 |
gatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctg |
186 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||| |||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
26305 |
agtctttcttcaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatttcgaacacagctttctg |
26227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 67163 - 67003
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
||||||||||| | ||| || ||||||||||| ||||| || ||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
67163 |
tattccacaggtaggattgagaccacattgcatactatatcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat |
67064 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttc |
171 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| ||||||||||||||| | ||||||||| |
|
|
| T |
67063 |
ctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaaccatttc |
67003 |
T |
|
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Target: scaffold0282 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 5538 - 5716
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
||||||||||| | || || ||||||||||| ||||| || ||||| ||||||||| | ||||||||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
5538 |
tattccacaggtagaattgagaccacattgcatactatatcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat |
5637 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgctt |
189 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| ||||||||||||||| | ||||||||| || ||| || ||||||| |
|
|
| T |
5638 |
ctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaaccatttcaaatacaactctctgctt |
5716 |
T |
|
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Target: scaffold0064 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 37590 - 37768
Alignment:
| Q |
8 |
tcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaat |
107 |
Q |
| |
|
|||||||||||||| | ||| || ||||| || || |||||||| ||||| ||||||||| | |||||||| |||||||| || ||||| || |||| | |
|
|
| T |
37590 |
tcatattccacaggtaggatagacaccacgttacatactatgtcgagactagggtcagatccagtgaaattcgaagtcatatcttcatcctccttgggaa |
37689 |
T |
|
| Q |
108 |
gatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctg |
186 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| || ||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
37690 |
agtctttcttcaaaattgacaatgggggtgaaattctctatgttgctggctttttaaccatttcgaacacagctttctg |
37768 |
T |
|
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Target: scaffold0026 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 138973 - 139151
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
||||| ||||| | ||| |||||||||||||| |||||||| ||||| |||||||| | |||||||| |||||||| || ||||| ||||||| ||| | |
|
|
| T |
138973 |
tattctacaggtaggattgaaaccacattgcatactatgtcgagactagggtcagacccagtgaaattcgaagtcatttcttcatcctctttgggatggt |
139072 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgctt |
189 |
Q |
| |
|
||||||| | |||||||| || ||||| || | || |||||||||||| |||||||||||||| |||||| ||||||| |
|
|
| T |
139073 |
ctttctttaagattgacaagggaggtgagatcctctttgttgctggttttttaaccatttcgaatacagctctctgctt |
139151 |
T |
|
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Target: scaffold0023 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 65376 - 65268
Alignment:
| Q |
81 |
aagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagc |
180 |
Q |
| |
|
||||||| || ||||| ||||||| |||||||||||| | |||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||| | |
|
|
| T |
65376 |
aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac |
65277 |
T |
|
| Q |
181 |
tttctgctt |
189 |
Q |
| |
|
||||||||| |
|
|
| T |
65276 |
tttctgctt |
65268 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 74554 - 74446
Alignment:
| Q |
81 |
aagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagc |
180 |
Q |
| |
|
||||||| || ||||| ||||||| |||||||||||| | |||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||| | |
|
|
| T |
74554 |
aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac |
74455 |
T |
|
| Q |
181 |
tttctgctt |
189 |
Q |
| |
|
||||||||| |
|
|
| T |
74454 |
tttctgctt |
74446 |
T |
|
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Target: scaffold0656 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 5235 - 5065
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
||||||||||| | || || ||||||||||| |||||||| ||||| |||||||| | |||||||| |||||||| || ||||| || |||| ||| | |
|
|
| T |
5235 |
tattccacaggtagaattgataccacattgcatactatgtcgagactgaggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatggt |
5136 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagct |
181 |
Q |
| |
|
||||||| | |||||||| |||||||| |||| |||||||||||| || |||||||||||||| |||||| |
|
|
| T |
5135 |
ctttctttaagattgacaaggggggtgagattctctctgttgctggctttttaaccatttcgaaaacagct |
5065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 32 - 189
Target Start/End: Original strand, 159086 - 159243
Alignment:
| Q |
32 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatg |
131 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||||||| | |||||||| |||||||| || ||||| || |||| ||| | |||||||| ||||| || | |
|
|
| T |
159086 |
accacattgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatggtttttcttcaagattgataagg |
159185 |
T |
|
| Q |
132 |
ggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgctt |
189 |
Q |
| |
|
| ||||| |||| ||||||||||| || ||||||||||| || || ||||||||||| |
|
|
| T |
159186 |
gcggtgagattctttctgttgctggctttttaaccatttcaaaaacggctttctgctt |
159243 |
T |
|
Back To:
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Target: scaffold0107 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 189
Target Start/End: Complemental strand, 1992 - 1874
Alignment:
| Q |
71 |
gtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccattt |
170 |
Q |
| |
|
|||||||| |||||||| || ||||| | |||| ||| |||||||| | |||||||| |||||||| |||| ||||||||||||||| |||||||||| |
|
|
| T |
1992 |
gtgaaattcgaagtcatttcttcatcctacttgggatggtctttctttaagattgacaaggggggtgagattctctctgttgctggttttttaaccattt |
1893 |
T |
|
| Q |
171 |
cgaacacagctttctgctt |
189 |
Q |
| |
|
|||| |||||| ||||||| |
|
|
| T |
1892 |
cgaaaacagctctctgctt |
1874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 33748 - 33613
Alignment:
| Q |
5 |
acatcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttgg |
104 |
Q |
| |
|
||||| |||||||||||||| | || ||||||||||| |||||||| ||||| ||||||||| | ||||||| |||||||| || ||||| ||||||| |
|
|
| T |
33748 |
acatcgtattccacaggcaaaactgacaccacattgcacactatgtcgagactggggtcagatccaatgaaattcgaagtcatttcttcatcctctttgg |
33649 |
T |
|
| Q |
105 |
aatgatctttcttcagaattgacaatgggggtgaaa |
140 |
Q |
| |
|
||| |||||||||| ||||| || || ||||||| |
|
|
| T |
33648 |
gatggtctttcttcaagattgataagggaggtgaaa |
33613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 45; Significance: 8e-17; HSPs: 4)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 75541 - 75405
Alignment:
| Q |
32 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatg |
131 |
Q |
| |
|
||||||||||| ||||| || ||||||| ||||||||| ||||||||||| ||||| || ||||| ||||| | ||| |||||||||| |||||| || | |
|
|
| T |
75541 |
accacattgcatactatatcgagacttgagtcagattctgtgaaatttgacgtcatttcttcatcctctttaggatggtctttcttcaaaattgataaag |
75442 |
T |
|
| Q |
132 |
ggggtgaaattcgctctgttgctggtttcttaaccat |
168 |
Q |
| |
|
| || || |||| || || |||||||| |||||||| |
|
|
| T |
75441 |
gaggggagattctttccgtggctggttttttaaccat |
75405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 83970 - 83876
Alignment:
| Q |
32 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattga |
126 |
Q |
| |
|
||||||||||| ||||| || ||||||||||||||||| ||||||||||| ||||| | ||||| ||||| | ||| |||||||||| |||||| |
|
|
| T |
83970 |
accacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatcctctttagtatggtctttcttcaaaattga |
83876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 121642 - 121548
Alignment:
| Q |
32 |
accacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattga |
126 |
Q |
| |
|
||||||||||| ||||| || ||||||||||||||||| ||||||||||| ||||| | ||||| ||||| | ||| |||||||||| |||||| |
|
|
| T |
121642 |
accacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatcctctttagtatggtctttcttcaaaattga |
121548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 148924 - 148842
Alignment:
| Q |
5 |
acatcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcat |
87 |
Q |
| |
|
||||||||||| ||| |||| || || ||||||||||| ||||| || |||||||||||||||| ||||||||||| ||||| |
|
|
| T |
148924 |
acatcatattcaacatgcaatattgataccacattgcatactatatcgagacttgggtcagattttgtgaaatttgacgtcat |
148842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0362 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 14634 - 14463
Alignment:
| Q |
11 |
tattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaatgat |
110 |
Q |
| |
|
|||||||||||||| | || || |||||||| | ||| || ||||| |||| |||| | |||||||| |||||||| || ||||| || || | ||||| |
|
|
| T |
14634 |
tattccacaggcaaaactgacacgacattgcatattatatcgagactggggttagatccagtgaaattcgaagtcatttcttcatcctccttaggatgat |
14535 |
T |
|
| Q |
111 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctt |
182 |
Q |
| |
|
|| |||||| |||||| || || || || |||| || || |||||||| |||||||||||||| ||||||| |
|
|
| T |
14534 |
ctctcttcaaaattgataagggaggggagattctttccgtggctggttttttaaccatttcgaaaacagctt |
14463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 42256 - 42379
Alignment:
| Q |
3 |
ggacatcatattccacaggcaagatggaaaccacattgcaaactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcatcttcttt |
102 |
Q |
| |
|
||||||| ||||| |||||||| | | ||||||||||| ||||| || |||||||| |||||||| |||||||| || ||||| || ||||| || || |
|
|
| T |
42256 |
ggacatcgtattcaacaggcaaaactaacaccacattgcacactatatcgagacttggatcagattcagtgaaattcgacgtcatttcttcatcctcctt |
42355 |
T |
|
| Q |
103 |
ggaatgatctttcttcagaattga |
126 |
Q |
| |
|
| ||||| |||||||| |||||| |
|
|
| T |
42356 |
aggatgatttttcttcaaaattga |
42379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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