View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3705_high_13 (Length: 253)
Name: NF3705_high_13
Description: NF3705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3705_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 9 - 237
Target Start/End: Original strand, 2384781 - 2385009
Alignment:
| Q |
9 |
gaagaatataaacctcttcatgtaccacattgttgagaaggggaaggattttctaccttctatttgagaaaggcattataactggtttgaaaatctcatt |
108 |
Q |
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| T |
2384781 |
gaagcatataaacctcttcatgtaccacattgttgagaagtggaaggattttctacgttctatttgagaaaggcattataactggtttgaaaatctcatt |
2384880 |
T |
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| Q |
109 |
aaaatctgagtcaacttaatgattgtagccattagccactagtcaggaattttacttgttattgatccatcggggttttcttctattttgaaaactcact |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2384881 |
aaaatctgagtcaacttaatgattgtagccattagccactagtcaggaattttacttgttattgatccatcggggttttcttctattttgaaaactcact |
2384980 |
T |
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| Q |
209 |
tgcaacctattgctaaggtatttgtactg |
237 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
2384981 |
tgcaacctattgctaaggtatttgtactg |
2385009 |
T |
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