View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3705_high_3 (Length: 406)

Name: NF3705_high_3
Description: NF3705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3705_high_3
NF3705_high_3
[»] chr1 (27 HSPs)
chr1 (19-279)||(8138602-8138859)
chr1 (151-396)||(10136226-10136464)
chr1 (151-322)||(25844722-25844895)
chr1 (153-326)||(16648591-16648764)
chr1 (151-326)||(26926686-26926854)
chr1 (181-326)||(38622151-38622298)
chr1 (195-326)||(51040522-51040655)
chr1 (184-326)||(16036568-16036712)
chr1 (184-326)||(23191829-23191971)
chr1 (184-326)||(40166902-40167046)
chr1 (230-326)||(11807181-11807279)
chr1 (237-326)||(12260938-12261028)
chr1 (184-396)||(19797984-19798191)
chr1 (204-294)||(46697309-46697399)
chr1 (351-396)||(8138533-8138578)
chr1 (286-390)||(10141000-10141095)
chr1 (188-326)||(39586076-39586212)
chr1 (151-240)||(5100132-5100220)
chr1 (232-326)||(39199805-39199905)
chr1 (151-198)||(39199733-39199780)
chr1 (351-396)||(38621612-38621657)
chr1 (351-391)||(33300412-33300452)
chr1 (90-149)||(7670872-7670930)
chr1 (90-149)||(7709094-7709152)
chr1 (90-149)||(7709416-7709474)
chr1 (286-382)||(47450287-47450375)
chr1 (351-396)||(11807119-11807164)
[»] chr5 (31 HSPs)
chr5 (151-396)||(26668179-26668417)
chr5 (151-396)||(26939776-26940014)
chr5 (151-396)||(6154389-6154628)
chr5 (150-326)||(29166929-29167107)
chr5 (145-326)||(37247750-37247933)
chr5 (150-326)||(7452717-7452895)
chr5 (151-396)||(37536894-37537133)
chr5 (151-396)||(37646012-37646252)
chr5 (151-326)||(36424600-36424777)
chr5 (151-396)||(20180112-20180346)
chr5 (151-326)||(36430480-36430655)
chr5 (152-326)||(10759320-10759495)
chr5 (152-396)||(12103954-12104183)
chr5 (151-396)||(39519296-39519524)
chr5 (151-396)||(39523935-39524163)
chr5 (184-326)||(35678888-35679032)
chr5 (234-326)||(40148805-40148897)
chr5 (165-281)||(23757135-23757253)
chr5 (165-281)||(23822591-23822709)
chr5 (230-326)||(17162818-17162917)
chr5 (230-326)||(17159338-17159437)
chr5 (184-325)||(23689034-23689177)
chr5 (184-316)||(4872854-4872988)
chr5 (205-315)||(6511614-6511726)
chr5 (257-326)||(16115294-16115363)
chr5 (151-242)||(40150243-40150334)
chr5 (184-326)||(9725763-9725901)
chr5 (149-202)||(25668154-25668207)
chr5 (353-391)||(16115381-16115419)
chr5 (351-391)||(6511780-6511820)
chr5 (251-315)||(40567661-40567725)
[»] chr4 (36 HSPs)
chr4 (151-390)||(8694620-8694852)
chr4 (150-326)||(31728322-31728499)
chr4 (150-396)||(31274415-31274654)
chr4 (151-326)||(5270380-5270557)
chr4 (151-396)||(37263520-37263758)
chr4 (151-389)||(16421953-16422184)
chr4 (151-326)||(33467960-33468136)
chr4 (163-326)||(55252606-55252772)
chr4 (151-384)||(13064770-13064994)
chr4 (151-396)||(29349164-29349403)
chr4 (150-322)||(37258821-37258993)
chr4 (150-326)||(5925760-5925929)
chr4 (151-396)||(2820693-2820930)
chr4 (151-387)||(12822867-12823097)
chr4 (154-396)||(51698826-51699065)
chr4 (151-308)||(19907269-19907427)
chr4 (151-396)||(13060366-13060606)
chr4 (166-396)||(32081139-32081361)
chr4 (184-326)||(19107540-19107685)
chr4 (150-326)||(23094071-23094247)
chr4 (184-326)||(19102928-19103072)
chr4 (268-396)||(19907148-19907268)
chr4 (151-326)||(33462315-33462488)
chr4 (187-318)||(8029328-8029457)
chr4 (204-326)||(32220574-32220698)
chr4 (253-386)||(6943684-6943819)
chr4 (189-326)||(27183197-27183326)
chr4 (187-326)||(12875366-12875507)
chr4 (188-396)||(40408842-40409046)
chr4 (150-218)||(6943834-6943902)
chr4 (184-326)||(48275829-48275970)
chr4 (150-390)||(31766779-31766999)
chr4 (188-315)||(47245103-47245230)
chr4 (184-315)||(8028148-8028271)
chr4 (230-326)||(12878864-12878961)
chr4 (351-389)||(39216249-39216287)
[»] chr7 (35 HSPs)
chr7 (147-396)||(26342108-26342348)
chr7 (151-389)||(3046481-3046712)
chr7 (151-322)||(4931189-4931362)
chr7 (151-396)||(12256922-12257160)
chr7 (151-384)||(21672117-21672343)
chr7 (151-396)||(3880868-3881110)
chr7 (181-389)||(42625565-42625772)
chr7 (159-296)||(44508261-44508400)
chr7 (155-282)||(2595776-2595905)
chr7 (187-326)||(13313307-13313448)
chr7 (189-326)||(23247554-23247692)
chr7 (151-324)||(10392044-10392221)
chr7 (251-396)||(12181811-12181951)
chr7 (151-276)||(12802295-12802421)
chr7 (184-326)||(26286146-26286292)
chr7 (191-308)||(23151683-23151804)
chr7 (204-326)||(4580427-4580551)
chr7 (253-326)||(10387410-10387484)
chr7 (351-396)||(27239055-27239100)
chr7 (276-389)||(8269207-8269312)
chr7 (273-326)||(12800352-12800405)
chr7 (258-324)||(9814941-9815008)
chr7 (351-390)||(10392241-10392280)
chr7 (258-324)||(10716866-10716933)
chr7 (184-312)||(30259238-30259368)
chr7 (351-396)||(16373248-16373293)
chr7 (351-396)||(23247891-23247936)
chr7 (351-396)||(27246697-27246742)
chr7 (351-390)||(6590164-6590203)
chr7 (362-396)||(10387513-10387547)
chr7 (351-396)||(2595726-2595771)
chr7 (204-248)||(8269350-8269394)
chr7 (351-391)||(9815027-9815067)
chr7 (351-391)||(10716952-10716992)
chr7 (290-326)||(44508427-44508463)
[»] chr3 (25 HSPs)
chr3 (150-396)||(18472907-18473146)
chr3 (151-396)||(20520861-20521100)
chr3 (151-391)||(14437650-14437881)
chr3 (151-326)||(757321-757497)
chr3 (151-390)||(7570172-7570404)
chr3 (151-322)||(23660446-23660619)
chr3 (151-322)||(23665078-23665251)
chr3 (150-396)||(12970764-12971006)
chr3 (151-326)||(18468174-18468351)
chr3 (167-326)||(55326739-55326899)
chr3 (150-396)||(46964913-46965152)
chr3 (151-326)||(27709893-27710067)
chr3 (184-326)||(3656247-3656391)
chr3 (151-313)||(20175368-20175529)
chr3 (257-396)||(39774890-39775020)
chr3 (184-326)||(55432189-55432330)
chr3 (172-326)||(12964860-12965018)
chr3 (156-223)||(32473106-32473173)
chr3 (145-314)||(3426047-3426215)
chr3 (205-384)||(12111605-12111769)
chr3 (231-310)||(7860686-7860767)
chr3 (252-326)||(29351189-29351263)
chr3 (184-266)||(38891139-38891222)
chr3 (351-396)||(3419893-3419938)
chr3 (351-389)||(55432134-55432172)
[»] chr2 (30 HSPs)
chr2 (151-396)||(17974308-17974546)
chr2 (150-389)||(12797836-12798070)
chr2 (150-326)||(18345378-18345556)
chr2 (151-326)||(17967921-17968098)
chr2 (151-396)||(30651815-30652053)
chr2 (151-326)||(25496341-25496518)
chr2 (151-396)||(19891464-19891700)
chr2 (151-326)||(9184374-9184552)
chr2 (150-326)||(9179682-9179861)
chr2 (151-396)||(25477246-25477485)
chr2 (150-391)||(29678583-29678818)
chr2 (153-326)||(19896912-19897085)
chr2 (151-326)||(12361211-12361384)
chr2 (153-311)||(20101609-20101769)
chr2 (151-389)||(24536973-24537212)
chr2 (150-275)||(1933965-1934092)
chr2 (234-324)||(40846622-40846714)
chr2 (184-326)||(28604048-28604191)
chr2 (230-325)||(15446319-15446416)
chr2 (184-326)||(31329024-31329168)
chr2 (184-326)||(31335745-31335889)
chr2 (184-326)||(42925666-42925808)
chr2 (252-326)||(44630508-44630582)
chr2 (151-210)||(40846478-40846537)
chr2 (230-326)||(25637801-25637898)
chr2 (351-389)||(12002056-12002094)
chr2 (269-326)||(34495183-34495240)
chr2 (351-396)||(20103260-20103305)
chr2 (353-390)||(40846735-40846772)
chr2 (352-396)||(12361152-12361196)
[»] scaffold0054 (2 HSPs)
scaffold0054 (154-390)||(30083-30313)
scaffold0054 (184-324)||(26405-26547)
[»] scaffold0352 (1 HSPs)
scaffold0352 (151-326)||(8071-8248)
[»] chr6 (29 HSPs)
chr6 (151-326)||(17963515-17963692)
chr6 (172-396)||(12405338-12405556)
chr6 (151-326)||(16835118-16835296)
chr6 (150-396)||(11533658-11533897)
chr6 (150-396)||(11559168-11559407)
chr6 (153-396)||(20747256-20747493)
chr6 (151-396)||(11569650-11569887)
chr6 (172-326)||(17600342-17600495)
chr6 (172-326)||(6406838-6406994)
chr6 (153-391)||(19994344-19994575)
chr6 (156-326)||(22694347-22694517)
chr6 (146-391)||(2699066-2699306)
chr6 (208-396)||(25313487-25313671)
chr6 (208-396)||(26200981-26201165)
chr6 (156-326)||(33686606-33686777)
chr6 (151-396)||(11612861-11613100)
chr6 (184-315)||(12689942-12690074)
chr6 (153-313)||(11428933-11429094)
chr6 (184-320)||(12797772-12797914)
chr6 (251-396)||(5856885-5857022)
chr6 (233-326)||(22610473-22610568)
chr6 (188-326)||(19674735-19674874)
chr6 (252-390)||(17914498-17914628)
chr6 (351-396)||(11428866-11428911)
chr6 (153-217)||(5857033-5857096)
chr6 (351-396)||(4156486-4156531)
chr6 (286-324)||(14509941-14509979)
chr6 (150-223)||(29891917-29891991)
chr6 (355-396)||(22694518-22694559)
[»] chr8 (27 HSPs)
chr8 (150-322)||(40124850-40125024)
chr8 (172-389)||(38181260-38181471)
chr8 (165-389)||(2966492-2966710)
chr8 (151-326)||(1808413-1808589)
chr8 (154-391)||(15950528-15950766)
chr8 (150-326)||(44924877-44925055)
chr8 (151-326)||(1909904-1910081)
chr8 (151-326)||(28559074-28559250)
chr8 (159-326)||(26780066-26780234)
chr8 (154-326)||(28564258-28564429)
chr8 (166-326)||(18875357-18875519)
chr8 (230-326)||(33417492-33417590)
chr8 (151-310)||(7002623-7002783)
chr8 (197-301)||(17021243-17021348)
chr8 (197-301)||(17551680-17551785)
chr8 (150-198)||(33417603-33417651)
chr8 (151-326)||(23547568-23547738)
chr8 (351-396)||(19168665-19168710)
chr8 (351-396)||(22714149-22714194)
chr8 (150-211)||(17027165-17027226)
chr8 (150-211)||(17557657-17557718)
chr8 (351-389)||(44925072-44925110)
chr8 (230-314)||(17953183-17953267)
chr8 (237-326)||(24672364-24672453)
chr8 (351-391)||(17027046-17027086)
chr8 (351-391)||(17557538-17557578)
chr8 (252-326)||(33100550-33100623)
[»] scaffold0002 (2 HSPs)
scaffold0002 (151-322)||(5030-5203)
scaffold0002 (151-326)||(442897-443073)
[»] scaffold0690 (1 HSPs)
scaffold0690 (151-396)||(6132-6372)
[»] scaffold0240 (1 HSPs)
scaffold0240 (151-390)||(4877-5108)
[»] scaffold0057 (1 HSPs)
scaffold0057 (154-391)||(36027-36257)
[»] scaffold0011 (1 HSPs)
scaffold0011 (184-311)||(64885-65013)


Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-106; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 8138859 - 8138602
Alignment:
Q  19 gaagacatgtgcatcccatccttctttgggtctgctgtatatgcaaaatccctatctttctcggcaacatataaaggaaaactaaaaaccattcaaaaaa 118  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  8138859 gaagacatgtgcatccaatccttctttgggtctgctgtatatgcaaaatccctatctttctcagcaacatataaaggaaatctaaaaaccattca-aaaa 8138761  T
Q  119 cgctacacacatcagaagccataaagcaaacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgat 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||    
T  8138760 cgctacacacatcagaagccataaagcaaacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaa---taagtaattatactttgat 8138664  T
Q  219 ataatattatctgaattgaaaaaatagagtat-gggtcccacataaaatggaacacacacat 279  Q
    |||||||| | ||||||||||||||||||||| ||||| |||||||||| ||||||||||||    
T  8138663 ataatattgtgtgaattgaaaaaatagagtatcgggtcacacataaaatagaacacacacat 8138602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 151 - 396
Target Start/End: Complemental strand, 10136464 - 10136226
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  10136464 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 10136365  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  10136364 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 10136267  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  10136266 a-------ttttattcgagaatatcactttccataaatttagcttatg 10136226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 25844895 - 25844722
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  25844895 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 25844796  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 322  Q
      ||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  25844795 gggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 25844722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 153 - 326
Target Start/End: Original strand, 16648591 - 16648764
Alignment:
Q  153 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-- 250  Q
    ||||||||||  |||||| |||||| | ||||| ||||||||||||     ||||||||||||||| |||| || | | ||||||||||||||||| |      
T  16648591 ttggaacattagtgtgattttggaaaataaattagaagattaaacacg---taattatactttgatctaatgttgtgtaaattgaaaaaatagagtgtag 16648687  T
Q  251 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
     |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  16648688 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 16648764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 26926686 - 26926854
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| |||| || | ||||||||        |||      
T  26926686 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaactaattatactttgatttaatgttgtgtgaattga--------agt-g 26926776  T
Q  251 gggtcccacataaaatggaacacacacattagcaatg-tttaaattgaggtatttaa-ttttaaatacttgataatga 326  Q
    || ||||||||||||| ||||||||||||||| | || ||||||||| ||||||||| ||||||||||||||||||||    
T  26926777 ggatcccacataaaatagaacacacacattagtagtgttttaaattgtggtatttaatttttaaatacttgataatga 26926854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 181 - 326
Target Start/End: Complemental strand, 38622298 - 38622151
Alignment:
Q  181 aaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacaca 278  Q
    |||||||||||||||| ||||| ||||||||||||||| |||| || | ||||||||||||||||||| |||  |||||||||||||| |||| |||| |    
T  38622298 aaattggaagattaaaaatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccacataaaatagaactcacata 38622199  T
Q  279 ttagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||| | |||||||| ||  |||||| ||||| |||||||||||||||    
T  38622198 ttagtagtgtttaaaatgcagtatttgattttgaatacttgataatga 38622151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 51040522 - 51040655
Alignment:
Q  195 aacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaa 292  Q
    |||| ||| ||||||||||||||| |||| || | ||||||||||||||| ||| ||||  |||||||| |||| ||||||||||||||| | |||||||    
T  51040522 aacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaataaagtgtgggagtcccacatgaaatagaacacacacattagtagtgtttaa 51040621  T
Q  293 attgaggtatttaattttaaatacttgataatga 326  Q
    |||| | |||||||||||||||||||||||||||    
T  51040622 attgtgttatttaattttaaatacttgataatga 51040655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 16036712 - 16036568
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 281  Q
    ||||||||||||||| ||| ||| || |||||||| || | || | ||||||||||||||||||| |||  |||||||||||||| ||||||||||||||    
T  16036712 ttggaagattaaacaccaagtaactaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacatta 16036613  T
Q  282 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    | | ||||||||| | ||||||||| ||||||||| |||||||||    
T  16036612 gtagtgtttaaatagtggtatttaaatttaaatacctgataatga 16036568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 23191829 - 23191971
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagc 283  Q
    ||||||||||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| ||||   |||||||||| |||||||||||||||     
T  23191829 ttggaagattaaacaccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtgggggtcacataaaatagaacacacacattagt 23191928  T
Q  284 aatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    | ||||||| | | ||||||||||||||||||| |||||||||    
T  23191929 agtgtttaagtagtggtatttaattttaaatacctgataatga 23191971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 40167046 - 40166902
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtatgggtcccacataaaatggaacacacacatta 281  Q
    ||||||||||||||| ||| | |||| |||||||| || |||| | |||||||||||||||||  ||| |||||||| ||||||| ||| |||||||| |    
T  40167046 ttggaagattaaacaccaagttattaaactttgatctagtattgtgtgaattgaaaaaatagaatgtaggggtcccaaataaaatagaagacacacatca 40166947  T
Q  282 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    | | ||||||||  | ||||||||||||||||||| |||||||||    
T  40166946 gtagtgtttaaacagtggtatttaattttaaatacctgataatga 40166902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 11807279 - 11807181
Alignment:
Q  230 tgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||||||||||||||||||  ||   | ||||||||||| ||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  11807279 tgaattgaaaaaatagagtgcggagattccacataaaatagaacacacacattagcagtgtttaaattgtggtatttaaatttaaatacttgataatga 11807181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 326
Target Start/End: Complemental strand, 12261028 - 12260938
Alignment:
Q  237 aaaaaatagagtatggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||||||||||| |||| ||||||||||||| |||||||| |||||| | ||||||||| | |||||||||||||||||||||||||||||    
T  12261028 aaaaaatagagtgtggggtcccacataaaatagaacacactcattagtagtgtttaaatagtggtatttaattttaaatacttgataatga 12260938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 396
Target Start/End: Original strand, 19797984 - 19798191
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa-tagagtatggg---tcccacataaaatggaacacacacat 279  Q
    |||||| |||||| | ||| |||||||| |||||| |||| || | ||||||||||||| || ||| ||||   ||||||||||||| |||| | || ||    
T  19797984 ttggaaaattaaataccaagtaattata-tttgatctaatgttgtgtgaattgaaaaaaataaagtgtggggggtcccacataaaatagaactcgcatat 19798082  T
Q  280 tagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcc 379  Q
    ||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||       |||||||||||| | |||||||||||||    
T  19798083 tagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat------aattatttttatttgagaatatcacttcc 19798174  T
Q  380 cataaatttagcctatg 396  Q
    |||||||||||| ||||    
T  19798175 cataaatttagcttatg 19798191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 204 - 294
Target Start/End: Complemental strand, 46697399 - 46697309
Alignment:
Q  204 taattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgtttaaat 294  Q
    |||||| |||||||| || | || | |||||||||||||||||||||||||||||||||||||  |||||| ||||||| |||||||||||    
T  46697399 taattagactttgatttagtgttgtgtgaattgaaaaaatagagtatgggtcccacataaaatataacacatacattagtaatgtttaaat 46697309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 8138578 - 8138533
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  8138578 tattatttttattcgtgaatatcacttcccataaatttagcttatg 8138533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 10141095 - 10141000
Alignment:
Q  286 tgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaa 385  Q
    ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||       ||||||||| |||||||||||||||||||    
T  10141095 tgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatta-------ttttattcgagaatatcacttcccataaa 10141005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 326
Target Start/End: Original strand, 39586076 - 39586212
Alignment:
Q  188 aagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatggaacacacacattagcaa 285  Q
    ||||||||| ||||| | |||| ||||||||||| |||| | | ||||||||||||||||| ||  ||||||||||||||| ||  ||| ||||||   |    
T  39586076 aagattaaagatcaagttattaaactttgatatagtattgtgt-aattgaaaaaatagagtgtggaggtcccacataaaataga--acaaacatta-ata 39586171  T
Q  286 tgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||||||| | | ||||||||||||||||| |||||||||    
T  39586172 tgtttaaatagtgatatttaattttaaatacctgataatga 39586212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 5100132 - 5100220
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaa 240  Q
    ||||| ||||||  |||||| |||||| | |||||||||||||||||| ||| |||||||||||| || |||| |||| |||||||||||    
T  5100132 tgttgtaacattagtgtgatgttggaaaataaattggaagattaaaca-caagtaattatactttaatctaatgttatgtgaattgaaaa 5100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 39199805 - 39199905
Alignment:
Q  232 aattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacattagca----atgtttaaattgaggtatttaattttaaatacttgataatg 325  Q
    ||||||||||||||||| |||  |||||||||||||| ||||||||||||||  |     |||||||||||  ||||||| |||||||||||| ||||||    
T  39199805 aattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacattaatagtgtgtgtttaaattgcagtatttacttttaaatacttaataatg 39199904  T
Q  326 a 326  Q
    |    
T  39199905 a 39199905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 39199733 - 39199780
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaaca 198  Q
    ||||||||||||| |||||| | |||||||||||||||||||||||||    
T  39199733 tgttggaacattggtgtgatgtgggaagaaaaattggaagattaaaca 39199780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 38621657 - 38621612
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||    
T  38621657 tattatttttatttgagaatatcacttcccataaatttagcttatg 38621612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 391
Target Start/End: Original strand, 33300412 - 33300452
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagc 391  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  33300412 tattatttttattcgtgaatatcaattctcataaatttagc 33300452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 7670872 - 7670930
Alignment:
Q  90 taaaggaaaactaaaaaccattcaaaaaacgctacacacatcagaagccataaagcaaac 149  Q
    ||||| ||||||||||||||| || ||| | ||||||||||||||||||||| |||||||    
T  7670872 taaagtaaaactaaaaaccatccataaa-cactacacacatcagaagccatagagcaaac 7670930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 7709094 - 7709152
Alignment:
Q  90 taaaggaaaactaaaaaccattcaaaaaacgctacacacatcagaagccataaagcaaac 149  Q
    ||||| ||||||||||||||| || ||| | ||||||||||||||||||||| |||||||    
T  7709094 taaagtaaaactaaaaaccatccataaa-cactacacacatcagaagccatagagcaaac 7709152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 7709474 - 7709416
Alignment:
Q  90 taaaggaaaactaaaaaccattcaaaaaacgctacacacatcagaagccataaagcaaac 149  Q
    ||||| ||||||||||||||| || ||| | ||||||||||||||||||||| |||||||    
T  7709474 taaagtaaaactaaaaaccatccataaa-cactacacacatcagaagccatagagcaaac 7709416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 47450287 - 47450375
Alignment:
Q  286 tgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccat 382  Q
    |||||||| || | |||||||||||||||||||||||||||        ||| | |||| |||| ||||||||||||||| ||||||||||| ||||    
T  47450287 tgtttaaactgcgttatttaattttaaatacttgataatga--------taaaaataataattattattatttttattcgagaatatcactttccat 47450375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 11807164 - 11807119
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||||||  |||||||| |||||||||||||||| ||||    
T  11807164 tattatttttattccggaatatcatttcccataaatttagcttatg 11807119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 4e-60; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 151 - 396
Target Start/End: Complemental strand, 26668417 - 26668179
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  26668417 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 26668318  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  26668317 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 26668220  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  26668219 a-------ttttattcgagaatatcactttccataaatttagcttatg 26668179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 151 - 396
Target Start/End: Complemental strand, 26940014 - 26939776
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  26940014 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 26939915  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  26939914 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 26939817  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  26939816 a-------ttttattcgagaatatcactttccataaatttagcttatg 26939776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 151 - 396
Target Start/End: Original strand, 6154389 - 6154628
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||||| |||||||| |||||| |||| || | ||||||||||||||||||| |    
T  6154389 tgttggaacattgatgtgatgttggatgaaaaattggaaaattaaacatcaagtaattatattttgatctaatgttgtgtgaattgaaaaaatagagtgt 6154488  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||        
T  6154489 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaat---- 6154582  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
      ||||||||||||||| |||||||||||  |||||||||||| ||||    
T  6154583 --tattatttttattcgagaatatcactttacataaatttagcttatg 6154628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 150 - 326
Target Start/End: Original strand, 29166929 - 29167107
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  29166929 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatttaatgttgtgtgaattgaaaaaatagagtg 29167028  T
Q  250 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |  |||||| ||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  29167029 tgagggtcctacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 29167107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 145 - 326
Target Start/End: Original strand, 37247750 - 37247933
Alignment:
Q  145 caaacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaata 244  Q
    |||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||    
T  37247750 caaaactgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaata 37247849  T
Q  245 gagtat--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||| |  ||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  37247850 gagtgtgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 37247933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 150 - 326
Target Start/End: Complemental strand, 7452895 - 7452717
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||  || |||||||||| |||| |||| || | |||||||||||||||||||     
T  7452895 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacacaaagtaattatactctgatctaatgttgtgtgaattgaaaaaatagagtg 7452796  T
Q  250 tggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  7452795 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 7452717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 151 - 396
Target Start/End: Original strand, 37536894 - 37537133
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||||||||||  | || |||||||| |||||||||||||||| |||||||||||||||||||| || | ||||||||||||||||||| |    
T  37536894 tgttggaacattgatgtgatgcttgatgaaaaattagaagattaaacatcaagtaattatactttgatataatgttgtgtgaattgaaaaaatagagtgt 37536993  T
Q  251 -gggtcccacataaaatggaacacacac--attagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 347  Q
     |||||||||||||||| ||||||||||  ||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||    
T  37536994 ggggtcccacataaaatagaacacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattat 37537091  T
Q  348 tactattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||       ||||||||| ||||||||||| ||||||||||||| ||||    
T  37537092 ta-------ttttattcgagaatatcactttccataaatttagcttatg 37537133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 151 - 396
Target Start/End: Original strand, 37646012 - 37646252
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||||||||||  | || ||||||||||||||||||||||||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  37646012 tgttggaacattgatgtgatgcttgatgaaaaattggaagattaaacatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 37646111  T
Q  251 --gggtcccacataaaatggaacacacac--attagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatta 346  Q
      |||||||||||||||| ||||||||||  ||||  | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||    
T  37646112 gggggtcccacataaaatagaacacacacatattattagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaatta 37646209  T
Q  347 ttactattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |||       ||||||||| ||||||||||| ||||||||||||| ||||    
T  37646210 tta-------ttttattcgagaatatcactttccataaatttagcttatg 37646252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 151 - 326
Target Start/End: Complemental strand, 36424777 - 36424600
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||| ||| |||||||||| |||| |||| || | ||||||||||||||||||| |    
T  36424777 tgttggaacattgatgtgatgttggataaaaaattggaagattaaacaccaagtaattatactatgatctaatgttgtgtgaattgaaaaaatagagtgt 36424678  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
      ||||| |||||||||| ||||||||||||||| | || |||||||| |||||||||||||||||||||| ||||||    
T  36424677 gggggtctcacataaaatagaacacacacattagtagtgcttaaattgtggtatttaattttaaatacttggtaatga 36424600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 151 - 396
Target Start/End: Original strand, 20180112 - 20180346
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||| ||||||  ||| |||||||||||||||||||||| ||| |||||||||||| || |||| || | |||||||| |||||||  | |    
T  20180112 tgttggaacattggtgtgatgctggtagaaaaattggaagattaaacaccaagtaattatactttaatctaatgttgtgtgaattgagaaaataggatgt 20180211  T
Q  251 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 350  Q
    ||| |||||||||||| ||||||||||||||| | ||||||||||  ||||||||||||||||   ||||||||||        ||||||||||          
T  20180212 gggacccacataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaa---ttgataatga--taaaaataatagtaat------ 20180300  T
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  20180301 tattatttttattcgagaatatcacttcctataaatttagcttatg 20180346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 151 - 326
Target Start/End: Complemental strand, 36430655 - 36430480
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| |||   |||||||| ||| || |||| || | ||||||||||||||||||| |    
T  36430655 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaatatcg--taattatattttaatctaatgttgtgtgaattgaaaaaatagagtgt 36430558  T
Q  251 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||  ||||||||||||| ||||||||||||||| | ||||||||||  |||||||||||||||||| ||| ||||||    
T  36430557 gggggtcccacataaaatagaacacacacattagtagtgtttaaattatggtatttaattttaaatatttggtaatga 36430480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 152 - 326
Target Start/End: Original strand, 10759320 - 10759495
Alignment:
Q  152 gttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat- 250  Q
    |||||||||||  |||||| |||||| | |||||||||||||||||| ||| |||||||| |||||| |||| || | |||||| |||||||||||| |     
T  10759320 gttggaacattagtgtgatgttggaaaataaattggaagattaaaca-caagtaattatattttgatttaatgttgtgtgaattaaaaaaatagagtgta 10759418  T
Q  251 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
     |||||||||||||||| ||||| ||||||||| | |||||||||||  ||||||||||||||||||||||||||||    
T  10759419 ggggtcccacataaaatagaacagacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatga 10759495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 152 - 396
Target Start/End: Complemental strand, 12104183 - 12103954
Alignment:
Q  152 gttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg 251  Q
    |||||||||||  |||||| |||||||||||||| |||||| ||||| ||| ||||||||||||||| |||| || | | ||| ||       ||||  |    
T  12104183 gttggaacattagtgtgatgttggaagaaaaattagaagatgaaacaccaagtaattatactttgatctaatgttgtgtaaataga-------gagtggg 12104091  T
Q  252 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattact 351  Q
    ||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||| |      |    
T  12104090 ggtcccacataaaatggaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtagt------t 12103999  T
Q  352 attatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||    
T  12103998 attatttttattcgagaatatcacttctcataaatttagcttatg 12103954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 151 - 396
Target Start/End: Complemental strand, 39519524 - 39519296
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||| ||||||||||| |||| || | ||||||||||||||||||| |    
T  39519524 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaaatatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 39519425  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
      ||||||| |||||||| |||||||||||          |||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  39519424 gggggtcccgcataaaatagaacacacaca----------ttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 39519337  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  39519336 a-------ttttattcgagaatatcactttccataaatttagcttatg 39519296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 151 - 396
Target Start/End: Complemental strand, 39524163 - 39523935
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||| ||||||||||| |||| || | ||||||||||||||||||| |    
T  39524163 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaaataaatatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 39524064  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
      ||||||  |||||||| |||||||||||          |||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  39524063 gggggtccagcataaaatagaacacacaca----------ttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 39523976  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  39523975 a-------ttttattcgagaatatcactttccataaatttagcttatg 39523935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 35678888 - 35679032
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacatta 281  Q
    ||||||||||||||||||| |||||| |||||||| || | || | ||||||||||||||||||| |  | |||||||||||||| ||||||||||||||    
T  35678888 ttggaagattaaacatcaagtaattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtaagagtcccacataaaatagaacacacacatta 35678987  T
Q  282 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    | | ||||||||| | ||||||| ||||||||||| |||||||||    
T  35678988 gtagtgtttaaatagtggtattttattttaaatacctgataatga 35679032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 40148897 - 40148805
Alignment:
Q  234 ttgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  40148897 ttgaaaaaatagagtgtgggtcccacataaaatagaacaaacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 40148805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 165 - 281
Target Start/End: Original strand, 23757135 - 23757253
Alignment:
Q  165 tgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacata 262  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||||||||| ||| |||| || | ||||||||||||||||||| |  |||||||||| |    
T  23757135 tgtgatgttggaagaaaaattggaagattaaacaccaagtaattatacttagatttaatgttgtgtgaattgaaaaaatagagtgtgggggtcccacaca 23757234  T
Q  263 aaatggaacacacacatta 281  Q
    |||| ||||||||||||||    
T  23757235 aaatagaacacacacatta 23757253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 165 - 281
Target Start/End: Original strand, 23822591 - 23822709
Alignment:
Q  165 tgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacata 262  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||||||||| ||| |||| || | ||||||||||||||||||| |  |||||||||| |    
T  23822591 tgtgatgttggaagaaaaattggaagattaaacaccaagtaattatacttagatttaatgttgtgtgaattgaaaaaatagagtgtgggggtcccacaca 23822690  T
Q  263 aaatggaacacacacatta 281  Q
    |||| ||||||||||||||    
T  23822691 aaatagaacacacacatta 23822709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 17162917 - 17162818
Alignment:
Q  230 tgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatga 326  Q
    ||||||||||||||||| | ||||  ||||||||||||| |||||||||||||||   ||||||||||||||||||||| |||||||||| |||||||||    
T  17162917 tgaattgaaaaaatagaatgtgggagtcccacataaaatagaacacacacattagtggtgtttaaattgaggtatttaatttttaaatacctgataatga 17162818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 17159437 - 17159338
Alignment:
Q  230 tgaattgaaaaaatagagtatgggt--cccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatga 326  Q
    ||||||||||||||||| | |||||  |||||||||||| ||| ||||||||||| | ||||| ||||||||||||||| |||||||||| |||||||||    
T  17159437 tgaattgaaaaaatagaatgtgggtgtcccacataaaatagaagacacacattagtagtgttttaattgaggtatttaatttttaaatacctgataatga 17159338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 23689177 - 23689034
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacatta 281  Q
    ||||||||||||||| |||  ||||| |||||||| || |  | | || ||||||||||| |||| ||||  ||||||||||||| |||||||||||||     
T  23689177 ttggaagattaaacaccaaacaattagactttgatctagtgatttgtggattgaaaaaattgagtgtggggatcccacataaaatagaacacacacattc 23689078  T
Q  282 gcaatgtttaaattgaggtatttaattttaaatacttgataatg 325  Q
    | | |||| |||||| ||||||||||||||||||| | ||||||    
T  23689077 gtagtgttaaaattgtggtatttaattttaaataccttataatg 23689034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 316
Target Start/End: Complemental strand, 4872988 - 4872854
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacatta 281  Q
    ||||||||||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| ||||  | ||| ||||||| ||||||||||| ||    
T  4872988 ttggaagattaaacaccaaattattaaactttgatttagtgttgtgtgaattgaaaaaatagagtgtgggggttccatataaaatagaacacacacaata 4872889  T
Q  282 gcaatgtttaaattgaggtatttaattttaaatac 316  Q
    | | ||||||||| | | |||||||||||||||||    
T  4872888 gtagtgtttaaatagtgatatttaattttaaatac 4872854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 205 - 315
Target Start/End: Original strand, 6511614 - 6511726
Alignment:
Q  205 aattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtat 302  Q
    ||||||| |||||| |||| || | ||||||||||||||  ||| ||||  ||||||||||||| |||| |||||||||| | |||||||||||  ||||    
T  6511614 aattatattttgatctaatgttgtgtgaattgaaaaaattaagtgtgggagtcccacataaaatagaactcacacattagtagtgtttaaattgcagtat 6511713  T
Q  303 ttaattttaaata 315  Q
    |||||||||||||    
T  6511714 ttaattttaaata 6511726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 16115294 - 16115363
Alignment:
Q  257 cacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||| |||||||||||||||||| ||||||    
T  16115294 cacataaaatgaaacacacacattagtaatgtttaaattacggtgtttaattttaaatacttgctaatga 16115363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 151 - 242
Target Start/End: Complemental strand, 40150334 - 40150243
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa 242  Q
    ||||||||||||  |||||| ||| || | |||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||    
T  40150334 tgttggaacattagtgtgatgttgaaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaa 40150243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 9725763 - 9725901
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattg-aaaaaatagagtatgg--gtcccacataaaatggaacacacacatt 280  Q
    ||||||||||||||| ||| | |||| ||||||||||| | || | ||||||| |||||||||||| |||  |||||||||||||| |||||||||        
T  9725763 ttggaagattaaacaccaagttattaaactttgatatagtgttgtgtgaattgaaaaaaatagagtgtggatgtcccacataaaatagaacacaca---- 9725858  T
Q  281 agcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
       | ||||||||| | |||||||||||||||||||  ||||||||    
T  9725859 ---agtgtttaaatagtggtatttaattttaaataccggataatga 9725901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 25668154 - 25668207
Alignment:
Q  149 cctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaa 202  Q
    ||||||||||||||| |||  | |||||||||||||||||||||||||||||||    
T  25668154 cctgttggaacattggtgttgtgttggaagaaaaattggaagattaaacatcaa 25668207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 391
Target Start/End: Original strand, 16115381 - 16115419
Alignment:
Q  353 ttatttttattcgtgaatatcacttcccataaatttagc 391  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  16115381 ttatttatattcgtggatatcacttcccataaatttagc 16115419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 391
Target Start/End: Original strand, 6511780 - 6511820
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagc 391  Q
    ||||||||||||| | ||||||||||||| |||||||||||    
T  6511780 tattatttttatttgagaatatcacttcctataaatttagc 6511820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 40567661 - 40567725
Alignment:
Q  251 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaata 315  Q
    |||| ||| |||||||  ||||||||| |||| | || |||||||| ||||||||||||||||||    
T  40567661 gggtaccatataaaataaaacacacacgttagtagtgattaaattgtggtatttaattttaaata 40567725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 7e-59; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 151 - 390
Target Start/End: Complemental strand, 8694852 - 8694620
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  8694852 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 8694753  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  8694752 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 8694655  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttag 390  Q
    |       ||||||||| ||||||||||| ||||||||||||    
T  8694654 a-------ttttattcgagaatatcactttccataaatttag 8694620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 150 - 326
Target Start/End: Original strand, 31728322 - 31728499
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||| |||||| |||| || | |||||||||||||||||||     
T  31728322 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattataatttgatctaatgttgtgtgaattgaaaaaatagagtg 31728421  T
Q  250 t-gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    | |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||||    
T  31728422 tggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttcataatga 31728499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 150 - 396
Target Start/End: Complemental strand, 31274654 - 31274415
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  31274654 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 31274555  T
Q  250 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 347  Q
    |  ||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||| | |||        |||||||||||||    
T  31274554 tgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgacagtga--taaaaataatagtaattat 31274457  T
Q  348 tactattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||       ||||||||| ||||||||||| ||||||||||||| ||||    
T  31274456 ta-------ttttattcgagaatatcactttccataaatttagcttatg 31274415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 5270380 - 5270557
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||| | |    
T  5270380 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagaatgt 5270479  T
Q  251 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatac-ttgataatga 326  Q
     |||||||||||||||| ||||||||||||||| | | ||||||||| ||||||||||||||||||| ||||||||||    
T  5270480 ggggtcccacataaaatagaacacacacattagtagtatttaaattgtggtatttaattttaaatactttgataatga 5270557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 151 - 396
Target Start/End: Original strand, 37263520 - 37263758
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| || || ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  37263520 tgttggaacattgatgtgatgtttgatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 37263619  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
      ||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  37263620 gggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 37263717  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  37263718 a-------ttttattcgagaatatcactttccataaatttagcttatg 37263758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 151 - 389
Target Start/End: Complemental strand, 16422184 - 16421953
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||| |||||| |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  16422184 tgttggaacattg-tgtgatgttggaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 16422086  T
Q  251 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
    |||  ||||||||||||| |||||||| |||||| | ||||||||||| ||||||||||||| |||||||||||||||        ||||||||||        
T  16422085 gggggtcccacataaaatagaacacacgcattagtagtgtttaaattgcggtatttaattttcaatacttgataatga--taaaaataatagtaat---- 16421992  T
Q  349 actattatttttattcgtgaatatcacttcccataaattta 389  Q
      ||||||||||||||| ||||||||||| |||||||||||    
T  16421991 --tattatttttattcgagaatatcactttccataaattta 16421953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 33467960 - 33468136
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||  |||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||| |||| || | | ||||||||||||||||| |    
T  33467960 tgttggaacattagtgtgatgttggaagaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtaaattgaaaaaatagagtgt 33468059  T
Q  251 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
     || ||||||||||||| ||||||||||||||| | |||||||||||  ||||||||||||||||||||||||||||    
T  33468060 aggttcccacataaaatagaacacacacattagtagtgtttaaattgtagtatttaattttaaatacttgataatga 33468136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 163 - 326
Target Start/End: Complemental strand, 55252772 - 55252606
Alignment:
Q  163 gatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa-tagagtatgg--gtcccac 259  Q
    |||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||| |||| || | ||||||||||||| |||||| |||  |||||||    
T  55252772 gatgtgatgttggatgaaaaattggaagactaaacatcaagtaattatactttgatttaatgttgtgtgaattgaaaaaaatagagtgtggtggtcccac 55252673  T
Q  260 ataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  55252672 ataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 55252606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 151 - 384
Target Start/End: Original strand, 13064770 - 13064994
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||| |||||| |||||||||||||||||| | |||| | ||| ||||||||||||||| |||| ||   ||||||||||||||||||| |    
T  13064770 tgttggaacattggtgtgatgttggaagaaaaattggaaaaataaataccaagtaattatactttgatctaatgtt---tgaattgaaaaaatagagtgt 13064866  T
Q  251 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
    |||  ||||||||||||| |||||||||||| |  | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||        
T  13064867 gggggtcccacataaaatagaacacacacatcaatagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat---- 13064960  T
Q  349 actattatttttattcgtgaatatcacttcccataa 384  Q
      ||||||||||||||||||||||||||||||||||    
T  13064961 --tattatttttattcgtgaatatcacttcccataa 13064994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 151 - 396
Target Start/End: Original strand, 29349164 - 29349403
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||| |||||| ||||||| |||| ||||||||||||||  || ||||||||||||||| || | ||   ||||||||||||||||||| |    
T  29349164 tgttggaacattggtgtgatgttggaaggaaaactggaagattaaacactaagtaattatactttgat-tagtgttgagtgaattgaaaaaatagagtgt 29349262  T
Q  251 g-ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 349  Q
    | ||||||||||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||        ||||| |||||||||    
T  29349263 gaggtcccacataaaatagaactcacacattagcagtgtttaaattgcggtatttaattttaaatactggataatga-taaaaaataatattaattatta 29349361  T
Q  350 ctattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
          ||||||||||||||||||| |||||||||||||||| ||||    
T  29349362 -----ttttttattcgtgaatatcatttcccataaatttagcttatg 29349403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 150 - 322
Target Start/End: Original strand, 37258821 - 37258993
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||  ||||||| |||| || | |||||||||||||||||||     
T  37258821 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaatta--ctttgatctaatgttgtgtgaattgaaaaaatagagtg 37258918  T
Q  250 tggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 322  Q
    ||||  |||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  37258919 tgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 37258993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 150 - 326
Target Start/End: Original strand, 5925760 - 5925929
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| | ||| |||||||||||||||||||| || | |||||||||||||| |        
T  5925760 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaataccaagtaattatactttgatataatgttgtgtgaattgaaaaaatgg---- 5925855  T
Q  250 tgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
     |||||||||||||||| ||  ||||||||||| | ||||||||||  |||||||||||||||||||||||||||||    
T  5925856 -gggtcccacataaaataga--acacacattagtagtgtttaaattatggtatttaattttaaatacttgataatga 5925929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 151 - 396
Target Start/End: Complemental strand, 2820930 - 2820693
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||| |||||  ||||||| ||||||||||||||||||| ||| |||||||| |||||| || | || | |||||||||||| |||||| |    
T  2820930 tgttggaacattggtgtgaagttggaaggaaaattggaagattaaacaccaagtaattata-tttgatctagtgttgtgtgaattgaaaaattagagtgt 2820832  T
Q  251 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
    |||  ||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||| || ||||||||||        ||||||||||        
T  2820831 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaattatttgataatga--taaaaataatagtaat---- 2820738  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
      ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  2820737 --tattatttttatt-gtgaatatcacttcccataaatttagcttatg 2820693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 151 - 387
Target Start/End: Original strand, 12822867 - 12823097
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||  |||||| |||||| | |||||||||||| ||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  12822867 tgttggaacattagtgtgatgttggaaaataaattggaagatcaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 12822966  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
      |||||||||||||||| |||| |||||||||| | |||||||| || ||||||||||||||||||||| |||||||        ||||||||||        
T  12822967 gggggtcccacataaaatagaactcacacattagtagtgtttaaactgtggtatttaattttaaatactttataatga--taaaaataatagtaat---- 12823060  T
Q  349 actattatttttattcgtgaatatcacttcccataaatt 387  Q
      ||||||||||||||  |||||||||||||||||||||    
T  12823061 --tattatttttattccagaatatcacttcccataaatt 12823097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 396
Target Start/End: Complemental strand, 51699065 - 51698826
Alignment:
Q  154 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg 253  Q
    |||||||||  | |||| |||||| | |||||| ||||||||||| ||| ||||||||||||||  |||| ||   ||||||||||||||||||| ||||    
T  51699065 tggaacattagtttgatgttggaaaataaattgaaagattaaacaccaaataattatactttgaactaatgttgcgtgaattgaaaaaatagagtgtggg 51698966  T
Q  254 --tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattact 351  Q
      ||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||| |||||||||||         ||||||||||||||      
T  51698965 ggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatgcttgataatgataaaaaaaaaatagtaattatta-- 51698868  T
Q  352 attatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
        |||||||||| ||||||||||| ||||||||||||| ||||    
T  51698867 ---ttttttattcgagaatatcactttccataaatttagcttatg 51698826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 151 - 308
Target Start/End: Complemental strand, 19907427 - 19907269
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||||| ||| |||||||| |||||| || | || | ||||||||||||||| ||| |    
T  19907427 tgttggaacattggtgtgatgttggaagaaaaattgaaagattaaacaccaagtaattatattttgatctagtgttgtgtgaattgaaaaaataaagtgt 19907328  T
Q  251 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatt 308  Q
     ||||| |||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  19907327 ggggtctcacataaaatagaacacacacattagcagtgtttaaattgcggtatttaatt 19907269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 151 - 396
Target Start/End: Complemental strand, 13060606 - 13060366
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaa-aaaatagagta 249  Q
    ||||||||||||  |||||| ||| || | |||||||||||||||||  ||| ||||||||||||||| ||||||| | ||||||||| ||||||||||     
T  13060606 tgttggaacattagtgtgatgttgaaaaataaattggaagattaaaccccaagtaattatactttgatctaatattgtgtgaattgaaaaaaatagagtg 13060507  T
Q  250 tg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 347  Q
    ||  |||| |||||||||  |||| |||||||| | | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||       
T  13060506 tggtggtcacacataaaaaagaactcacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatga--taacaataatagtaat--- 13060412  T
Q  348 tactattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
       | ||||||||||| | ||||||||||||||||||||||||| ||||    
T  13060411 ---tcttatttttatttgagaatatcacttcccataaatttagcttatg 13060366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 166 - 396
Target Start/End: Original strand, 32081139 - 32081361
Alignment:
Q  166 gtgatcttggaagaaaaattggaagattaaacatca-actaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacata 262  Q
    ||||| |||||| | ||||||||||||||||||| | | ||||||||||||||| |||| |    ||||||||||||||||||| |||  ||||||| ||    
T  32081139 gtgatgttggaaaataaattggaagattaaacataatagtaattatactttgatctaatgtg---tgaattgaaaaaatagagtgtggaggtcccacgta 32081235  T
Q  263 aaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttat 362  Q
    |||| |||| |||||||||| | ||||||||||| | ||||||||||||||||||||||||| |        ||||||||||      ||||||||||||    
T  32081236 aaatagaactcacacattagtagtgtttaaattgtgatatttaattttaaatacttgataatta--taaaaataatagtaat------tattatttttat 32081327  T
Q  363 tcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||| ||||||||||||||||||||||||| ||||    
T  32081328 tcgagaatatcacttcccataaatttagcttatg 32081361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 19107685 - 19107540
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataa-tattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatt 280  Q
    ||||||||||||||| ||| | |||| |||||||| ||| |||| | ||||||||||| ||||||| |||  |||||||||||||| |||||||||||||    
T  19107685 ttggaagattaaacaccaagttattaaactttgatctaagtattgtgtgaattgaaaatatagagtgtggaggtcccacataaaatagaacacacacatt 19107586  T
Q  281 agcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    || | ||||||||| | ||||||||||||||||||| |||||||||    
T  19107585 agtagtgtttaaatagtggtatttaattttaaatacctgataatga 19107540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 326
Target Start/End: Complemental strand, 23094247 - 23094071
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||||||||||||||  || ||| |||||||| ||||||||||| |||  ||||| | |||||  |||| | || ||||||||||||||||||      
T  23094247 ctgttggaacattgatgtgaagttagaaaaaaaattgaaagattaaacaccaaggaattagaatttgagctaatgtgatatgaattgaaaaaatagagag 23094148  T
Q  250 tgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||  |||||||||||  |||||||||||||| | || |||||||  |  ||||||||||||||||||||||||||    
T  23094147 tggggtccacataaaataaaacacacacattagtagtgattaaattacgagatttaattttaaatacttgataatga 23094071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 19103072 - 19102928
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 281  Q
    ||||||||||||||  ||| | |||| |||||||| || | || | ||||||||||||||||||| |||  |||||||||||||| ||||||||||||||    
T  19103072 ttggaagattaaactccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacatta 19102973  T
Q  282 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
      | ||||||||| | | ||||||||||||||||| |||||||||    
T  19102972 atagtgtttaaatagtgatatttaattttaaatacctgataatga 19102928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 19907268 - 19907148
Alignment:
Q  268 gaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtg 367  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||        |||||| |||      |||||||||||||||||    
T  19907268 gaacacacacattagcagtgtttaaattgcggtatttaattttaaatacttgatgatga--taaaaataatagaaat------tattatttttattcgtg 19907177  T
Q  368 aatatcacttcccataaatttagcctatg 396  Q
    |||||||||||||||||||||||| ||||    
T  19907176 aatatcacttcccataaatttagcttatg 19907148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 33462315 - 33462488
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||  ||| || || |||||||||||| |  |||||||| ||| |||||||| |||||| |||| || | ||||||||||||||||||| |    
T  33462315 tgttggaacattagtgtaatgttcgaagaaaaattgaataattaaacaccaaataattata-tttgatctaatgttgtgtgaattgaaaaaatagagtgt 33462413  T
Q  251 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||  |||||| |||||||  || ||||||||||| | |||||||||||  || |||||||||||||||||||||||||    
T  33462414 ggaggtccca-ataaaat--aagacacacattagtagtgtttaaattgcagtgtttaattttaaatacttgataatga 33462488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 187 - 318
Target Start/End: Original strand, 8029328 - 8029457
Alignment:
Q  187 gaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacattagca 284  Q
    |||||||||||| ||| |||||| |||||||| || |||| | ||||||||||||||||||| |  |||||||||||||||| |||||||||||    ||    
T  8029328 gaagattaaacaccaagtaattaaactttgatctagtattgtgtgaattgaaaaaatagagtgtgggggtcccacataaaatagaacacacaca----ca 8029423  T
Q  285 atgtttaaattgaggtatttaattttaaatactt 318  Q
     |||||| || | |||||||||||||||||||||    
T  8029424 gtgtttacatagtggtatttaattttaaatactt 8029457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 204 - 326
Target Start/End: Original strand, 32220574 - 32220698
Alignment:
Q  204 taattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggta 301  Q
    |||||||| |||||| ||||||| | |||||| |||||||||||| ||||  ||||||||||||| ||||| ||||||||  | ||||||||||  | ||    
T  32220574 taattatattttgatctaatattgtgtgaattaaaaaaatagagtgtgggggtcccacataaaatagaacatacacattattagtgtttaaattccgata 32220673  T
Q  302 tttaattttaaatacttgataatga 326  Q
    |||||||||||||| ||||||||||    
T  32220674 tttaattttaaatatttgataatga 32220698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 386
Target Start/End: Complemental strand, 6943819 - 6943684
Alignment:
Q  253 gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatg--agnnnnnnntaatagtaattattac 350  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||  ||||||||||| |||||||||||||||  |        |||||||| |  | |     
T  6943819 gtcccacataaaatagaacacatacattagtaatgtttaaattgctgtatttaatttcaaatacttgataatgataaaaaaaaataatagtagtagtaat 6943720  T
Q  351 tattatttttattcgtgaatatcacttcccataaat 386  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6943719 tattatttttattggtgaatatcacttcccataaat 6943684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 326
Target Start/End: Complemental strand, 27183326 - 27183197
Alignment:
Q  189 agattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgt 288  Q
    |||||||| | ||| |||||||||||||||||||| || | ||||||||||||      |  |||||||||||||||| |||||||||  |||| | |||    
T  27183326 agattaaataccaagtaattatactttgatataatgttgtgtgaattgaaaaa------tgggggtcccacataaaatagaacacaca--ttagtagtgt 27183235  T
Q  289 ttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||||||  |||||||||||||||||||||||||||||    
T  27183234 ttaaattatggtatttaattttaaatacttgataatga 27183197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 326
Target Start/End: Complemental strand, 12875507 - 12875366
Alignment:
Q  187 gaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacattagca 284  Q
    |||||||||||| ||| |||||| ||||| || || | || | ||||||||||||||||||| |  ||||||  |||||||| |||| |||||||||| |    
T  12875507 gaagattaaacaccaagtaattagactttcatctagtgttgtgtgaattgaaaaaatagagtgtgggggtcctgcataaaatagaacccacacattagta 12875408  T
Q  285 atgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    || ||||||| | ||||||| |||||||||| ||||||||||    
T  12875407 atatttaaatagtggtatttgattttaaatatttgataatga 12875366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 396
Target Start/End: Complemental strand, 40409046 - 40408842
Alignment:
Q  188 aagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatg 287  Q
    |||||||||||  || | ||||||||||||| |||| || | |||||| ||||||||| ||  |||| ||| ||||||| ||||||||| ||||  | ||    
T  40409046 aagattaaacactaaatgattatactttgatctaatgttgtatgaattaaaaaaatagtgtg-gggtaccaaataaaatagaacacacatattattagtg 40408948  T
Q  288 tttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaatt 387  Q
    ||||||||| |||||||||||||||||| ||||||    |       |||||||| |  | | ||||||||||||| ||||||||||||||||||| |||    
T  40408947 tttaaattgcggtatttaattttaaatatttgata---tggtaaaaataatagtagtagtaattattatttttattagtgaatatcacttcccatacatt 40408851  T
Q  388 tagcctatg 396  Q
    |||| ||||    
T  40408850 tagcttatg 40408842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 6943902 - 6943834
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgat 218  Q
    |||||| ||||||  |||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  6943902 ctgttgcaacattagtgtgatgttggaagaaaaattggaagattaaacatcaagtaattatactttgat 6943834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 48275829 - 48275970
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtc-ccacataaaatggaacacacacattag 282  Q
    ||||||||||||||||||| | |||| |||||||| |  | || | ||||||||||||||||||| ||||   ||| |||||||  |||||||||  |||    
T  48275829 ttggaagattaaacatcaagttattaaactttgatcttgtgttgtgtgaattgaaaaaatagagtgtgggggtccatataaaatataacacacac--tag 48275926  T
Q  283 caatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    || ||||||||| | |||||||| |||||||||||| |||||||    
T  48275927 cagtgtttaaatagtggtatttatttttaaatacttaataatga 48275970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 390
Target Start/End: Complemental strand, 31766999 - 31766779
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa-tagagt 248  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||             ||||||||| |||| || | ||||||||||||| |||| |    
T  31766999 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaa-------------tactttgatctaatgtt-tgtgaattgaaaaaaatagatt 31766914  T
Q  249 atggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatgagnnnnnnntaatagtaatt 345  Q
     ||||  ||||||||||||| ||||||||||||||  | || |||||||| ||||||||| ||||||||||||||||||||        |||||||||||    
T  31766913 gtgggggtcccacataaaatagaacacacacattaatagtg-ttaaattgtggtatttaatttttaaatacttgataatga--taaaaataatagtaatt 31766817  T
Q  346 attactattatttttattcgtgaatatcacttcccataaatttag 390  Q
    ||||       ||||||||| ||||||||||| ||||||||||||    
T  31766816 atta-------ttttattcgagaatatcactttccataaatttag 31766779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 315
Target Start/End: Complemental strand, 47245230 - 47245103
Alignment:
Q  188 aagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatg 287  Q
    |||||||||||  || | |||| | |||||| || |||| | |||||||||||||||| ||  || ||| | ||||||| ||||||||||||||  | ||    
T  47245230 aagattaaacactaagttattaaagtttgatctagtattgtgtgaattgaaaaaatagtgtggggatcctaaataaaatagaacacacacattattagtg 47245131  T
Q  288 tttaaattgaggtatttaattttaaata 315  Q
    ||||||| | | ||||||||||||||||    
T  47245130 tttaaatagcgatatttaattttaaata 47245103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 315
Target Start/End: Original strand, 8028148 - 8028271
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagc 283  Q
    |||||||||||||||   | |||||| ||||||||  ||| || | ||||||||||||||||||| |  |     |||||||| |||||||||||||||     
T  8028148 ttggaagattaaaca---agtaattaaactttgatcgaatgttgtgtgaattgaaaaaatagagtgtaag-----cataaaatagaacacacacattagt 8028239  T
Q  284 aatgtttaaattgaggtatttaattttaaata 315  Q
    | ||||||||| |  |||||||||||||||||    
T  8028240 agtgtttaaatagttgtatttaattttaaata 8028271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 12878961 - 12878864
Alignment:
Q  230 tgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||||||||||||||||||| | |  ||||||||||||| ||||| ||||||||  | |||||||||   | ||||| ||| |||||||||||||||||    
T  12878961 tgaattgaaaaaatagagtaagaggatcccacataaaatagaacatacacattaatagtgtttaaataatgatattt-attataaatacttgataatga 12878864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 389
Target Start/End: Original strand, 39216249 - 39216287
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaattta 389  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  39216249 tattatttttattcgtgtatatcacttcgcataaattta 39216287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 3e-58; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 147 - 396
Target Start/End: Complemental strand, 26342348 - 26342108
Alignment:
Q  147 aacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga 246  Q
    |||||||||||||||| ||||||| ||||| |||||||| |||||||||| ||||| |||||||||||| || ||||||||| ||||||||||||||||     
T  26342348 aacctgttggaacattaatgtgatgttggatgaaaaattcgaagattaaatatcaagtaattatactttaatttaatattatgtgaattgaaaaaatagt 26342249  T
Q  247 gtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatta 346  Q
    ||  |||||||||||||||| ||||||||||||||| | ||||||||||| | |||||||||||||||||||||||||||        ||||||||||||    
T  26342248 gtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtgatatttaattttaaatacttgataatga--taaaaataatagtaatta 26342151  T
Q  347 ttactattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |||       ||||||||| ||||||||||| ||||||||||||| ||||    
T  26342150 tta-------ttttattcgagaatatcactttccataaatttagcttatg 26342108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 151 - 389
Target Start/End: Complemental strand, 3046712 - 3046481
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||| ||||||| |||||| ||||||||||||||| ||||||||||| ||| |||||||| ||||||||||  || | ||||||||||||||  ||| |    
T  3046712 tgttgaaacattggtgtgatgttggaagaaaaattgaaagattaaacaccaagtaattataatttgatataaagttgtgtgaattgaaaaaattaagtgt 3046613  T
Q  251 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 349  Q
    ||| ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||| | |||| ||||    
T  3046612 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--------taaaaataataatta 3046521  T
Q  350 ctattatttttattcgtgaatatcacttcccataaattta 389  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  3046520 ctataatttttattcgtgaatatcacttcctataaattta 3046481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 4931362 - 4931189
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| |||||||||||||||||||| || | ||||||||||||||||||| |    
T  4931362 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatataatgttgtgtgaattgaaaaaatagagtgt 4931263  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 322  Q
      ||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  4931262 gggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 4931189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 151 - 396
Target Start/End: Complemental strand, 12257160 - 12256922
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||| |||||| |||||| | || |||||||||||| || ||| ||||||||||||||| |||| || | | ||||||||||||||||| |    
T  12257160 tgttggaacattggtgtgatgttggaatagaatttggaagattaatcaccaaataattatactttgatttaatgttgtgtaaattgaaaaaatagagtgt 12257061  T
Q  251 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 349  Q
    ||| ||||||||||||| |||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||         
T  12257060 ggggtcccacataaaatagaacacacgcattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaat----- 12256968  T
Q  350 ctattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||    
T  12256967 -tattatttttattcgtgaatatcacttcccataaatttagcttatg 12256922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 151 - 384
Target Start/End: Complemental strand, 21672343 - 21672117
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||| ||| ||||||||||||||| |||  || | ||||||||||||||||| | |    
T  21672343 tgttggaacattggtgtgatgttggaagaaaaattggaagaataaacaccaagtaattatactttgatctaacgttgtgtgaattgaaaaaatagaatgt 21672244  T
Q  251 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 349  Q
    ||| ||||||||||||| || |||||||||||| | ||||||||||| |||||||||||||| ||||||||||||||        ||||||||||         
T  21672243 gggatcccacataaaatagagcacacacattagtactgtttaaattgcggtatttaattttatatacttgataatga--taaaaataatagtaat----- 21672151  T
Q  350 ctattatttttattcgtgaatatcacttcccataa 384  Q
     ||||||||||||||||||||||||||||||||||    
T  21672150 -tattatttttattcgtgaatatcacttcccataa 21672117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 396
Target Start/End: Complemental strand, 3881110 - 3880868
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||| | |||| |||| ||||||||||||||||||||||||| | ||| ||||||||||||||| |||||||   ||||||||||||||||||| |    
T  3881110 tgttggaatagtgatctgatgttggaagaaaaattggaagattaaataccaagtaattatactttgatctaatattgcgtgaattgaaaaaatagagtgt 3881011  T
Q  251 --gggtcccacataaaatggaacacaca---cattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatt 345  Q
      ||||| |||||||||| |||||||||   |||||| | || |||||||| | |||||||||||||||||||||||||||        ||||||||||     
T  3881010 gggggtctcacataaaatagaacacacacatcattagtagtgcttaaattgtgatatttaattttaaatacttgataatga--taaaaataatagtaat- 3880914  T
Q  346 attactattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
         ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  3880913 -----tattatttttatttgtgaatatcacttcccataaatttagcttatg 3880868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 181 - 389
Target Start/End: Original strand, 42625565 - 42625772
Alignment:
Q  181 aaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacaca 278  Q
    |||||||||||||||||| ||| ||||||||||||||| |||| |||| ||||||||||||||||||| |  |||||||||||||||| |||| ||||||    
T  42625565 aaattggaagattaaacaccaagtaattatactttgatctaatgttatgtgaattgaaaaaatagagtgtgggggtcccacataaaatagaactcacaca 42625664  T
Q  279 ttagcaatgtttaaattgag-----gtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatc 373  Q
    |||| | ||||||||||| |     ||||||||||||||||||||||||||||        ||||||||||      ||||||||||||||| |||||||    
T  42625665 ttagtagtgtttaaattgcggtgcagtatttaattttaaatacttgataatga--taaaaataatagtaat------tattatttttattcgagaatatc 42625756  T
Q  374 acttcccataaattta 389  Q
    |||| |||||||||||    
T  42625757 actttccataaattta 42625772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 44508261 - 44508400
Alignment:
Q  159 cattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcc 256  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||| | ||||||||||||||||||| ||||  |||    
T  44508261 cattgatgtgatgttggatgaaaaattggaagattaaatatcaagtaattatactttgatctaatattgtgtgaattgaaaaaatagagtgtgggaatcc 44508360  T
Q  257 cacataaaatggaacacacacattagcaatgtttaaattg 296  Q
    || ||||||| ||||||||| ||||| | |||||||||||    
T  44508361 catataaaatagaacacacatattagtagtgtttaaattg 44508400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 155 - 282
Target Start/End: Complemental strand, 2595905 - 2595776
Alignment:
Q  155 ggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg- 253  Q
    ||||||||||||| || ||||||||||||||||||||||||||| ||| |||||| ||||| || |||| || | ||||||||||||||||||| ||||     
T  2595905 ggaacattgatgtaatgttggaagaaaaattggaagattaaacaccaaataattacactttaatctaatgttgtgtgaattgaaaaaatagagtgtgggt 2595806  T
Q  254 -tcccacataaaatggaacacacacattag 282  Q
     ||||||||||||| |||||||||||||||    
T  2595805 atcccacataaaatagaacacacacattag 2595776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 187 - 326
Target Start/End: Original strand, 13313307 - 13313448
Alignment:
Q  187 gaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacattagca 284  Q
    ||||||||||||| || | | || |||||||| || |||| | ||||||||||||||||||| |||  |||||||||||||| ||||||||||||||| |    
T  13313307 gaagattaaacattaagttactaaactttgatttagtattgtgtgaattgaaaaaatagagtgtggatgtcccacataaaatagaacacacacattagta 13313406  T
Q  285 atgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
     ||||||||| | |||||||||||||||||||||||||||||    
T  13313407 gtgtttaaatagtggtatttaattttaaatacttgataatga 13313448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 189 - 326
Target Start/End: Original strand, 23247554 - 23247692
Alignment:
Q  189 agattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg-ggtcccacataaaatggaacacacacattagcaatg 287  Q
    |||||||||| ||| ||||||||||||||| |||| |||| ||||||||||||||||||| |  |||||||| |||||| ||| ||| ||||||| | ||    
T  23247554 agattaaacaccaagtaattatactttgatctaatgttatgtgaattgaaaaaatagagtgtatggtcccacctaaaatagaaaacaaacattagtagtg 23247653  T
Q  288 tttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  23247654 tttaaattacggtatttaattttaaatacttgataatga 23247692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 151 - 324
Target Start/End: Original strand, 10392044 - 10392221
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa--tagagt 248  Q
    ||||||||||||| |||||  |||| || ||||| | ||||||||||| ||| ||||||||||||||| || | || | |||||||||||||  ||||||    
T  10392044 tgttggaacattggtgtgaagttgggaggaaaatcgaaagattaaacaccaagtaattatactttgatctagtgttgtgtgaattgaaaaaaaatagagt 10392143  T
Q  249 atg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataat 324  Q
     ||  || |||||||||||| |||||||||  ||| || ||||||||||| |||||||||||||||||||||||||||    
T  10392144 gtgagggccccacataaaatagaacacacatgttatcagtgtttaaattgcggtatttaattttaaatacttgataat 10392221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 396
Target Start/End: Original strand, 12181811 - 12181951
Alignment:
Q  251 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 350  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||||| ||       
T  12181811 gggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaataat--- 12181905  T
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
     ||| |||||||||||||||||||||||| ||||||||||| ||||    
T  12181906 cattttttttattcgtgaatatcacttccaataaatttagcttatg 12181951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 151 - 276
Target Start/End: Complemental strand, 12802421 - 12802295
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||  |||||| |||||| | |||||||||||||||||| ||| |||||||||||| || |||| || | ||||||||||||||||||| |    
T  12802421 tgttggaacattagtgtgatgttggaaaataaattggaagattaaacaccaagtaattatactttaatctaatgttgtgtgaattgaaaaaatagagtgt 12802322  T
Q  251 -gggtcccacataaaatggaacacaca 276  Q
     |||||||||||||||| |||| ||||    
T  12802321 ggggtcccacataaaatagaactcaca 12802295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 26286146 - 26286292
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa----tagagtatgggtcccacataaaatggaacacacacat 279  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | | |||||||||||    ||| ||  |||||||||||||||| ||||||||||||    
T  26286146 ttggaagattaaacaccaagtaattaaactttgatctagtgttgtataaattgaaaaaaaaaatagtgtgggggtcccacataaaatagaacacacacat 26286245  T
Q  280 tagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||| | ||||||||| | ||||||||||||||||||  |||||||||    
T  26286246 tagtagtgtttaaatagtggtatttaattttaaataactgataatga 26286292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 308
Target Start/End: Original strand, 23151683 - 23151804
Alignment:
Q  191 attaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacac--attagcaat 286  Q
    |||||||||||| ||||||||||||||| |||| || | ||||||||||||||| ||| |||  ||||| |||||||| ||||||||||  ||||| | |    
T  23151683 attaaacatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaataaagtgtgggagtcccgcataaaatagaacacacacatattagtagt 23151782  T
Q  287 gtttaaattgaggtatttaatt 308  Q
    |||||||||||| |||||||||    
T  23151783 gtttaaattgagatatttaatt 23151804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 204 - 326
Target Start/End: Complemental strand, 4580551 - 4580427
Alignment:
Q  204 taattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggta 301  Q
    |||||| |||||||| || | || | |||||| |||||||||||| |  |||||||| ||||||| ||||||||||||||| | |||||| || | ||||    
T  4580551 taattaaactttgatttagtgttgtgtgaattaaaaaaatagagtgtaggggtcccatataaaatagaacacacacattagtagtgtttatatagtggta 4580452  T
Q  302 tttaattttaaatacttgataatga 326  Q
    ||||||| ||||||| |||||||||    
T  4580451 tttaattctaaatacctgataatga 4580427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 326
Target Start/End: Original strand, 10387410 - 10387484
Alignment:
Q  253 gtcccacataaaatggaacacacacattagcaa-tgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||||| ||||||| ||||||||| |||||||  ||||||||||| |||||||||||||||||| ||||||||||    
T  10387410 gtcccatataaaatagaacacacatattagcaggtgtttaaattgtggtatttaattttaaatatttgataatga 10387484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 27239100 - 27239055
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  27239100 tattatttttattcgtgaatatcacttcccataaatttagcttatg 27239055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 389
Target Start/End: Complemental strand, 8269312 - 8269207
Alignment:
Q  276 acattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcac 375  Q
    ||||||| | |||||||| || | |||||||||||||||||||||||||||        |||||||||||||||      ||||||||||||||||||||    
T  8269312 acattagaagtgtttaaactgcgatatttaattttaaatacttgataatga--taaaaataatagtaattatta------tttttattcgtgaatatcac 8269221  T
Q  376 ttcccataaattta 389  Q
    || |||||||||||    
T  8269220 tttccataaattta 8269207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 326
Target Start/End: Complemental strand, 12800405 - 12800352
Alignment:
Q  273 cacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||||||||| | |||||||||||  ||||||||||||||||||||||||||||    
T  12800405 cacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatga 12800352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 9814941 - 9815008
Alignment:
Q  258 acataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataat 324  Q
    ||||||||| ||||||| ||||||| | | ||||||||| ||||||||| ||||||||||||||||||    
T  9814941 acataaaatagaacacatacattagtagtttttaaattgcggtatttaatttttaaatacttgataat 9815008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 390
Target Start/End: Original strand, 10392241 - 10392280
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttag 390  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  10392241 tattatttttattcatgaatatcacttcccataaatttag 10392280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 10716866 - 10716933
Alignment:
Q  258 acataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataat 324  Q
    ||||||||| ||||||| ||||||| | | ||||||||| ||||||||| ||||||||||||||||||    
T  10716866 acataaaatagaacacatacattagtagtttttaaattgcggtatttaatttttaaatacttgataat 10716933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 30259368 - 30259238
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 281  Q
    ||||||||||||| | ||| |||||| |||||||| || | || | | ||||||||||||||||| |||  |  ||||||||||| || |||| ||||||    
T  30259368 ttggaagattaaataccaagtaattaaactttgatctagtgttttgtaaattgaaaaaatagagtgtgggagatccacataaaatagatcacatacatta 30259269  T
Q  282 gcaatgtttaaattgaggtatttaattttaa 312  Q
    | | ||||||||| | | |||||||||||||    
T  30259268 gtagtgtttaaatagtgatatttaattttaa 30259238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 16373293 - 16373248
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  16373293 tattatttttattcgtgtatatcactttccataaatttagcttatg 16373248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 23247891 - 23247936
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||||    
T  23247891 tattatttttattcgtaaatatcacttcccataaattgagcttatg 23247936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 27246697 - 27246742
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||||    
T  27246697 tattatttttattcgtggatatcacttctcataaatttagcttatg 27246742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 351 - 390
Target Start/End: Original strand, 6590164 - 6590203
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttag 390  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  6590164 tattatttttattcgtggatatcatttcccataaatttag 6590203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 396
Target Start/End: Original strand, 10387513 - 10387547
Alignment:
Q  362 ttcgtgaatatcacttcccataaatttagcctatg 396  Q
    |||||||||||||||||||||||||||||| ||||    
T  10387513 ttcgtgaatatcacttcccataaatttagcttatg 10387547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 2595771 - 2595726
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |||| |||||||||| ||||||||||||||||||| ||||| ||||    
T  2595771 tattctttttattcgagaatatcacttcccataaacttagcttatg 2595726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 8269394 - 8269350
Alignment:
Q  204 taattatactttgatataatattatctgaattgaaaaaatagagt 248  Q
    ||||||||||||||| ||||||| | ||||||||| |||||||||    
T  8269394 taattatactttgatctaatattgtgtgaattgaataaatagagt 8269350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 391
Target Start/End: Original strand, 9815027 - 9815067
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagc 391  Q
    |||||||||||||| | ||||||||||| ||||||||||||    
T  9815027 tattatttttattcatcaatatcacttctcataaatttagc 9815067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 391
Target Start/End: Original strand, 10716952 - 10716992
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagc 391  Q
    |||||||||||||| | ||||||||||| ||||||||||||    
T  10716952 tattatttttattcatcaatatcacttctcataaatttagc 10716992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 326
Target Start/End: Original strand, 44508427 - 44508463
Alignment:
Q  290 taaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  44508427 taaattgtggtatttaattttaaatatttgataatga 44508463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 3e-58; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 150 - 396
Target Start/End: Complemental strand, 18473146 - 18472907
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||  || ||||||||||||||| |||| || | |||||||||||||||||||     
T  18473146 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacacaaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 18473047  T
Q  250 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 347  Q
    |  |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||    
T  18473046 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattat 18472949  T
Q  348 tactattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||       ||||||||| ||||||||||| ||||||||||||| ||||    
T  18472948 ta-------ttttattcgagaatatcactttccataaatttagcttatg 18472907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 151 - 396
Target Start/End: Complemental strand, 20521100 - 20520861
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||  |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  20521100 tgttggaacattagtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 20521001  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
      |||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||        ||||||||||        
T  20521000 gggggtcccacataaaatagaatacacacattagtagtgtttaaattgcggtatttaactttaaatacttgataatga--taaaaataatagtaat---- 20520907  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
      ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  20520906 --tattatttttattcgagaatatcacttcccataaatttagcttatg 20520861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 151 - 391
Target Start/End: Original strand, 14437650 - 14437881
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |    || | ||||||||||||||||||| |    
T  14437650 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctg---ttgtgtgaattgaaaaaatagagtgt 14437746  T
Q  251 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
    ||  ||| |||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||| | |||| ||     
T  14437747 ggaggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--------taaaaataataata 14437838  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagc 391  Q
    | ||||||||||||||| ||||||||||| |||||||||||||    
T  14437839 attattatttttattcgagaatatcactttccataaatttagc 14437881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 757321 - 757497
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  757321 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 757420  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
      ||||| |||||||||| ||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  757421 gggggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatga 757497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 151 - 390
Target Start/End: Original strand, 7570172 - 7570404
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||| ||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  7570172 tgttggaacattaatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 7570271  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
      ||||||| |||||||| ||||||||| ||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  7570272 gggggtcccgcataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 7570369  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttag 390  Q
    |       ||||||||| ||||||||||| ||||||||||||    
T  7570370 a-------ttttattcgagaatatcactttccataaatttag 7570404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 23660446 - 23660619
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  23660446 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 23660545  T
Q  251 g--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 322  Q
    |  | |||||||||||||  |||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  23660546 ggagctcccacataaaataaaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 23660619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 23665078 - 23665251
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  23665078 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 23665177  T
Q  251 g--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 322  Q
    |  | ||||| ||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  23665178 ggagctcccatataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 23665251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 396
Target Start/End: Original strand, 12970764 - 12971006
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    |||||||||||||||| |||| ||||| ||||||| ||||||||||||| ||| ||||||||| ||||| |||| || | ||||||||||||||| |||     
T  12970764 ctgttggaacattgatatgatgttggatgaaaaatcggaagattaaacaccaagtaattatacgttgatttaatgttgtgtgaattgaaaaaataaagtg 12970863  T
Q  250 tg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttt-aaatacttgataatgagnnnnnnntaatagtaatta 346  Q
    ||  | ||||||||||||| |||||||||| |||| | ||||||||||| ||||||||||||| ||||||| ||||||||        ||||||||||      
T  12970864 tggtgatcccacataaaatagaacacacactttagtagtgtttaaattgcggtatttaattttaaaatactggataatga-taaaaaataatagtaat-- 12970960  T
Q  347 ttactattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
        ||||||||||||||||||||||||||||||||||||||||| ||||    
T  12970961 ----tattatttttattcgtgaatatcacttcccataaatttagcttatg 12971006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 326
Target Start/End: Complemental strand, 18468351 - 18468174
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaa-aaaatagagta 249  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||| |||||| |||| || | ||||||||| ||||||||||     
T  18468351 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatagtttgatctaatgttgtgtgaattgaaaaaaatagagtg 18468252  T
Q  250 t-gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    | |||  | |||||| || ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  18468251 tgggggtctacataatatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 18468174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 167 - 326
Target Start/End: Complemental strand, 55326899 - 55326739
Alignment:
Q  167 tgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaa 264  Q
    |||| ||||| ||||||||||||||||||||| ||| |||||||| |||||| |||| || | ||||||||||||||| ||| ||||  |||||||||||    
T  55326899 tgatgttggatgaaaaattggaagattaaacaccaagtaattata-tttgatctaatgttgtgtgaattgaaaaaatatagtgtgggggtcccacataaa 55326801  T
Q  265 atggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    || ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  55326800 atagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 55326739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 150 - 396
Target Start/End: Complemental strand, 46965152 - 46964913
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    |||||||||||||  ||| || |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  46965152 ctgttggaacattagtgtaatgttggaaaataaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 46965053  T
Q  250 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 347  Q
    |  ||| |||||||||||| |||| |||||||||  | |||||||| || |||||||||||||||||||||||||||||        ||| | |||| ||    
T  46965052 tgagggccccacataaaatagaactcacacatta-tagtgtttaaactgcggtatttaattttaaatacttgataatga--------taaaaataataat 46964962  T
Q  348 tactattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
     |  |||||||||||||| |||||||||||| |||||||||||| ||||    
T  46964961 aataattatttttattcgagaatatcacttcacataaatttagcttatg 46964913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 151 - 326
Target Start/End: Complemental strand, 27710067 - 27709893
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatat-aatattatctgaattgaaaaaatagagta 249  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||| ||| || |||||||||||| | ||| || | |||||||||||||||||||     
T  27710067 tgttggaacattgatgtgatgttgaatgaaaaattggaagattaaacaccaagta-ttatactttgattttaatgttgtgtgaattgaaaaaatagagtg 27709969  T
Q  250 tggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||| ||||||||||||| ||||| ||   |||| | ||||||||||| |||||||||||||||||||||||||||||    
T  27709968 tggggtcccacataaaatagaacatacg--ttagtagtgtttaaattgtggtatttaattttaaatacttgataatga 27709893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 3656247 - 3656391
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtatgggtcccacataaaatggaacacacacatta 281  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | |||||||||||||||||  ||| |||||||||||||||| ||||||  ||||||    
T  3656247 ttggaagattaaacaccaagtaattaaactttgatttagtgttgtgtgaattgaaaaaatagaatgtaggggtcccacataaaatagaacacggacatta 3656346  T
Q  282 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    | | ||||||||| | ||||||||||||||||||| |||||||||    
T  3656347 gtagtgtttaaatagtggtatttaattttaaatacctgataatga 3656391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 151 - 313
Target Start/End: Complemental strand, 20175529 - 20175368
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||  |||||| |||||| | |||||| ||||||||||| ||| ||||||||||||||| |||| || | | ||||||||||||||||| |    
T  20175529 tgttggaacattagtgtgatgttggaaaataaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgttaattgaaaaaatagagtgt 20175430  T
Q  251 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaa 313  Q
     |||| ||||||||||| ||  ||||||||||| | | |||||||||  |||||||||||||||    
T  20175429 ggggttccacataaaataga--acacacattagtagtatttaaattgcagtatttaattttaaa 20175368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 396
Target Start/End: Original strand, 39774890 - 39775020
Alignment:
Q  257 cacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattat 356  Q
    |||||||||| ||||||||| ||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||           
T  39774890 cacataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatta------- 39774980  T
Q  357 ttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||| ||||||||||| ||||||||||||| ||||    
T  39774981 ttttattcgagaatatcactttccataaatttagcttatg 39775020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 55432330 - 55432189
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacatta 281  Q
    ||||||||||||||| ||| |||||||| |||||| ||||  | | ||||||||||||||| ||| ||||  ||||||| ||||| |||||||||  |||    
T  55432330 ttggaagattaaacaccaagtaattata-tttgatctaatgctgtgtgaattgaaaaaataaagtgtgggggtcccacacaaaatagaacacaca--tta 55432234  T
Q  282 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    | | |||||||||||  ||||||||||||||||| ||||||||||    
T  55432233 gtagtgtttaaattgcagtatttaattttaaatatttgataatga 55432189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 172 - 326
Target Start/End: Original strand, 12964860 - 12965018
Alignment:
Q  172 ttggaagaaaaattggaa-gattaaacatcaactaattatactttgatataatattatctgaattg-aaaaaatagagtatg--ggtcccacataaaatg 267  Q
    ||||| |||||||| ||| ||||||||| ||| ||||||||||||||| |||| ||   ||||||| |||||||||||| ||  |||||||||||||||     
T  12964860 ttggatgaaaaattagaatgattaaacaccaagtaattatactttgatttaatgttgcatgaattgaaaaaaatagagtgtggtggtcccacataaaat- 12964958  T
Q  268 gaacacacacattagcaatgtttaaattgaggtatttaatttt-aaatacttgataatga 326  Q
     |||||| || |||| | ||||||||||| ||||||||||||| ||||| ||||||||||    
T  12964959 aaacacaaactttagtagtgtttaaattgcggtatttaattttaaaatatttgataatga 12965018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 32473106 - 32473173
Alignment:
Q  156 gaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataat 223  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  32473106 gaacattgatgtgatattggatgaaaaattggaagattaaacaccaagtaattatactttgatctaat 32473173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 314
Target Start/End: Complemental strand, 3426215 - 3426047
Alignment:
Q  145 caaacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaata 244  Q
    ||||||||||||||||||  |||||| |||||| | |||||  ||||||||||| ||| |||||||||||| || | || || | ||||||   ||||||    
T  3426215 caaacctgttggaacattagtgtgatgttggaaaataaatttaaagattaaacaccaagtaattatactttaatcttatgttgtgtgaatt---aaaata 3426119  T
Q  245 ga--gtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaat 314  Q
    ||  ||  |||| ||||||||||| |||| |||||||||| | |||||||| || |||||| ||||||||||    
T  3426118 gaatgtgggggtaccacataaaatagaactcacacattagtagtgtttaaactgcggtattcaattttaaat 3426047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 384
Target Start/End: Original strand, 12111605 - 12111769
Alignment:
Q  205 aattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtattt 304  Q
    ||||||||||||||||| |  | | |||||||||||| || ||| |||||| |||||||||| ||||||||      | ||||||||||||  |||||||    
T  12111605 aattatactttgatatagt--tgtgtgaattgaaaaagtaaagtgtgggtctcacataaaatagaacacacc-----gtaatgtttaaatttcggtattt 12111697  T
Q  305 aattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataa 384  Q
    |||||||||| |||||||||||        ||||||||||||||      ||||||||||||||||||||||||||||||    
T  12111698 aattttaaatgcttgataatga--taaaaataatagtaattatt------atttttattcgtgaatatcacttcccataa 12111769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 310
Target Start/End: Complemental strand, 7860767 - 7860686
Alignment:
Q  231 gaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttt 310  Q
    |||||||||||||||||| |||  |||||||||||||| ||||||||||||||  | ||||||||||  |||||||||||||    
T  7860767 gaattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacattaatagtgtttaaattatggtatttaatttt 7860686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 326
Target Start/End: Complemental strand, 29351263 - 29351189
Alignment:
Q  252 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||||||||||||||  |||||||||||||  | ||||||||| | ||||||||||||||||||  |||||||||    
T  29351263 ggtcccacataaaataaaacacacacattattagtgtttaaatagtggtatttaattttaaatatctgataatga 29351189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 38891222 - 38891139
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg-ggtcccacataaaat 266  Q
    ||||||||||||||| | | |||||| |||||||| |||| || | ||||||||||||||| ||| || |||||||||||||||    
T  38891222 ttggaagattaaacaccgagtaattaaactttgatctaatgttttgtgaattgaaaaaatatagtgtgaggtcccacataaaat 38891139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 3419938 - 3419893
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||||    
T  3419938 tattatttttattcgagaatatcacttcgcataaatttagcatatg 3419893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 389
Target Start/End: Complemental strand, 55432172 - 55432134
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaattta 389  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  55432172 tattatttttattcgagaatatcatttcccataaattta 55432134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 3e-58; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 151 - 396
Target Start/End: Original strand, 17974308 - 17974546
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  17974308 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacatcaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 17974407  T
Q  251 gg-gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatac-ttgataatgagnnnnnnntaatagtaattatt 348  Q
    || |||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||||        ||| | ||||| |     
T  17974408 ggtgtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatactttgataatga--------taaaaataattgta 17974499  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    | ||||| ||||||||| ||||||||||| ||||||||||||| ||||    
T  17974500 attatta-ttttattcgagaatatcactttccataaatttagcttatg 17974546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 150 - 389
Target Start/End: Complemental strand, 12798070 - 12797836
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||| |||  |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  12798070 ctgttggaatattagtgtgatgttggaagaaaaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 12797971  T
Q  250 tg---ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatta 346  Q
    ||   ||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||      
T  12797970 tgggaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat-- 12797875  T
Q  347 ttactattatttttattcgtgaatatcacttcccataaattta 389  Q
        ||||||||||||||| ||||||||||||| |||||||||    
T  12797874 ----tattatttttattcgagaatatcacttcctataaattta 12797836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 150 - 326
Target Start/End: Complemental strand, 18345556 - 18345378
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | |||||| ||||||||||||     
T  18345556 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattaaaaaaatagagtg 18345457  T
Q  250 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |  |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||||    
T  18345456 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttaataatga 18345378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 17967921 - 17968098
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| |||| || | |||||| |||||||||||| |    
T  17967921 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacatcaagtaattatactttgatctaatgttgtgtgaattaaaaaaatagagtgt 17968020  T
Q  251 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatac-ttgataatga 326  Q
     |||||||||||||||| ||||||||| ||||| | ||||||||||| ||||||||||||||||||| ||||||||||    
T  17968021 ggggtcccacataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatactttgataatga 17968098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 151 - 396
Target Start/End: Complemental strand, 30652053 - 30651815
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  30652053 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 30651954  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
      ||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  30651953 gggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 30651856  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  30651855 a-------ttttattcgagaatatcactttccataaatttagcttatg 30651815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 25496341 - 25496518
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||| ||||||  |||||| |||||| | |||||||||||||||||| ||| ||||||||||||||| ||||||| | ||||||||||||||||||| |    
T  25496341 tgttgtaacatttgtgtgatgttggaaaataaattggaagattaaacaccaaataattatactttgatctaatattgtgtgaattgaaaaaatagagtgt 25496440  T
Q  251 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||  |||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  25496441 ggaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 25496518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 151 - 396
Target Start/End: Original strand, 19891464 - 19891700
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||  ||||||||||||||| |||| || | ||||||||||||||||| | |    
T  19891464 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccatgtaattatactttgatctaatcttgtgtgaattgaaaaaatagaatgt 19891563  T
Q  251 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
    ||  |||||||||||||| ||  ||||||||||  | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  19891564 gggagtcccacataaaataga--acacacattattagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 19891659  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |       ||||||||| ||||||||||| ||||||||||||| ||||    
T  19891660 a-------ttttattcgagaatatcactttccataaatttagcttatg 19891700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 9184374 - 9184552
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattg--aaaaaatagagt 248  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||| |||||||| |||| || | |||||||  ||||||||||||    
T  9184374 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaaataattaaactttgatctaatgttgtgtgaattgaaaaaaaatagagt 9184473  T
Q  249 at--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
     |  |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  9184474 gtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatga 9184552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 150 - 326
Target Start/End: Original strand, 9179682 - 9179861
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattg--aaaaaatagag 247  Q
    ||||||||| |||||||||||  |||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||  |||||||||||    
T  9179682 ctgttggaatattgatgtgatggtggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaaaatagag 9179781  T
Q  248 tat--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    | |  |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  9179782 tgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatga 9179861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 151 - 396
Target Start/End: Original strand, 25477246 - 25477485
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||  |||||| ||| || | |||||||||||||||||||||| ||||||||||||||| |||| || |  ||||| |||||||||||| |    
T  25477246 tgttggaacattagtgtgatgttgaaaaataaattggaagattaaacatcaaataattatactttgatttaatgttgtgcgaattaaaaaaatagagtgt 25477345  T
Q  251 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
    ||  |||  ||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||        
T  25477346 ggtggtcttacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat---- 25477439  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
      ||||||||||||||| ||||||||||| | ||||||||||| ||||    
T  25477440 --tattatttttattcgagaatatcactttctataaatttagcttatg 25477485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 150 - 391
Target Start/End: Complemental strand, 29678818 - 29678583
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    |||||| ||||||  |||||| ||||||||||||||||||||||||| |  ||  ||||||| |||||| |||| || | |||||||||||||||||||     
T  29678818 ctgttgcaacattagtgtgatgttggaagaaaaattggaagattaaatactaaggaattatattttgatctaatgttgtgtgaattgaaaaaatagagtg 29678719  T
Q  250 tggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 347  Q
    | ||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||        ||||||||||       
T  29678718 tagggatcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatga--taaaaataatagtaat--- 29678624  T
Q  348 tactattatttttattcgtgaatatcacttcccataaatttagc 391  Q
       |||||||||||||||  ||||||||||||||||||||||||    
T  29678623 ---tattatttttattcgaaaatatcacttcccataaatttagc 29678583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 153 - 326
Target Start/End: Complemental strand, 19897085 - 19896912
Alignment:
Q  153 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtat 250  Q
    ||||||||||| | |||| |||||||| ||| |||||||||||| ||||| |||||||| ||||||||||| || | |||||||||||||||||  ||      
T  19897085 ttggaacattggtatgatgttggaagagaaaatggaagattaaatatcaagtaattatattttgatataatgttgtgtgaattgaaaaaatagagcgtgg 19896986  T
Q  251 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||||||||||||||| ||  ||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||    
T  19896985 gggtcccacataaaataga--acacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatga 19896912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 151 - 326
Target Start/End: Complemental strand, 12361384 - 12361211
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||  |||| | |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||| | |    
T  12361384 tgttggaacattagtgtggtgttggaaaataaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagaatgt 12361285  T
Q  251 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||| ||||||||||| ||  | ||||||||| | ||||||||||| |||||||||||||||||| ||||||||||    
T  12361284 gggttccacataaaataga--agacacattagtagtgtttaaattgtggtatttaattttaaataattgataatga 12361211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 153 - 311
Target Start/End: Original strand, 20101609 - 20101769
Alignment:
Q  153 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-- 250  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |      
T  20101609 ttggaaaattggtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtcg 20101708  T
Q  251 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttta 311  Q
    |||| ||||||||||| ||||| ||||||||| | | ||||||||   |||||||||||||    
T  20101709 gggttccacataaaatagaacatacacattagtagtatttaaattactgtatttaatttta 20101769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 151 - 389
Target Start/End: Original strand, 24536973 - 24537212
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatatta-------tctgaattgaaaaaat 243  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||| ||| |||| || ||||||| |||| ||        | ||||||||||||||    
T  24536973 tgttggaacattggtgttatgttggaagaaaaattggaagattaaacaccaattaatcattctttgatctaatgtttaatgttgtgtgaattgaaaaaat 24537072  T
Q  244 agagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagt 341  Q
    ||||| ||||  |||||||||||||  |||||| ||||||| | |||||||| |  |||||||||||||||||||||||||||||        |||||||    
T  24537073 agagtgtgggggtcccacataaaatataacacatacattagtagtgtttaaactacggtatttaattttaaatacttgataatga--taaaaataatagt 24537170  T
Q  342 aattattactattatttttattcgtgaatatcacttcccataaattta 389  Q
    |||      |||||||||||||||||||||||| |||||||| |||||    
T  24537171 aat------tattatttttattcgtgaatatcatttcccatacattta 24537212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 150 - 275
Target Start/End: Original strand, 1933965 - 1934092
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  1933965 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 1934064  T
Q  250 tg--ggtcccacataaaatggaacacac 275  Q
     |  ||||||||||||||| ||||||||    
T  1934065 gggaggtcccacataaaatagaacacac 1934092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 234 - 324
Target Start/End: Original strand, 40846622 - 40846714
Alignment:
Q  234 ttgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataat 324  Q
    ||||||||||||||| ||||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||    
T  40846622 ttgaaaaaatagagtgtggggatcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataat 40846714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 28604191 - 28604048
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg-ggtcccacataaaatggaacacacacattag 282  Q
    ||||||||||||||| ||| |||||| | |||||| || | || | |||||||||||||||||||||| ||||||||||||||| ||  ||||| ||||     
T  28604191 ttggaagattaaacaccaagtaattaaattttgatctagtgttgtgtgaattgaaaaaatagagtatgcggtcccacataaaatagattacacagattat 28604092  T
Q  283 caatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    || ||||||||| | | ||||||||||||||||| |||||||||    
T  28604091 cagtgtttaaatagtgatatttaattttaaatacatgataatga 28604048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 230 - 325
Target Start/End: Original strand, 15446319 - 15446416
Alignment:
Q  230 tgaattgaaaaaatagagtat-gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatg 325  Q
    ||||||||||||||||||| | |||||||||||||||| ||||||| ||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  15446319 tgaattgaaaaaatagagtgttgggtcccacataaaatagaacacatacattagtagtgtttaaattgtggtatttaatttttaaatacttgataatg 15446416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 31329168 - 31329024
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 281  Q
    ||||||||||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| |||  ||||||| |||||| ||||| |||| |||    
T  31329168 ttggaagattaaacaccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacgtaaaatagaacaaacacgtta 31329069  T
Q  282 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    | | ||||||||| | ||||||||||||||||||| |||||||||    
T  31329068 gtagtgtttaaatagtggtatttaattttaaatacatgataatga 31329024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 31335889 - 31335745
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 281  Q
    ||||||||||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| |||  ||||||| |||||| ||||| |||| |||    
T  31335889 ttggaagattaaacaccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacgtaaaatagaacaaacacgtta 31335790  T
Q  282 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    | | ||||||||| | ||||||||||||||||||| |||||||||    
T  31335789 gtagtgtttaaatagtggtatttaattttaaatacatgataatga 31335745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 326
Target Start/End: Original strand, 42925666 - 42925808
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatggaacacacacatta 281  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | ||||||||||||||||||| ||  |||||||| |||||| ||  ||||||||||    
T  42925666 ttggaagattaaacaccaagtaattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacgtaaaataga--acacacatta 42925763  T
Q  282 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    | | ||||||||| | | ||||||||||||||||| |||||||||    
T  42925764 gtagtgtttaaatagtgatatttaattttaaatacctgataatga 42925808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 326
Target Start/End: Original strand, 44630508 - 44630582
Alignment:
Q  252 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||||||||||||| ||||||||||||||| | ||||||||| | ||| ||||||||||||||| |||||||||    
T  44630508 ggtcccacataaaatagaacacacacattagtattgtttaaatagtggtgtttaattttaaatacctgataatga 44630582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 40846478 - 40846537
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattat 210  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| ||| |||||||    
T  40846478 tgttggaacattggtgtgatgttggaagaaaaattggaagattaaacaccaaataattat 40846537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 25637801 - 25637898
Alignment:
Q  230 tgaattgaaaaaatagag--tatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatga 326  Q
    |||||||||||| |||||  | ||||||||||||||||| ||  ||||||||||| | |||||||| || ||||||||| ||||||||||||||||||||    
T  25637801 tgaattgaaaaattagagattgtgggtcccacataaaataga--acacacattagtagtgtttaaactgcggtatttaatttttaaatacttgataatga 25637898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 351 - 389
Target Start/End: Original strand, 12002056 - 12002094
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaattta 389  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  12002056 tattatttttattcgtggatatcacttcccataaattta 12002094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 34495183 - 34495240
Alignment:
Q  269 aacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||||||| ||||  | |||||||||||  ||||||||||||||||||||||||||||    
T  34495183 aacacacatattattagtgtttaaattgcagtatttaattttaaatacttgataatga 34495240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 20103260 - 20103305
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||| | ||||||||||||| ||||||||||||| ||||    
T  20103260 tattatttttagtggtgaatatcactttccataaatttagcttatg 20103305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 390
Target Start/End: Original strand, 40846735 - 40846772
Alignment:
Q  353 ttatttttattcgtgaatatcacttcccataaatttag 390  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  40846735 ttatttttatttgtgaatatcacttcctataaatttag 40846772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 396
Target Start/End: Complemental strand, 12361196 - 12361152
Alignment:
Q  352 attatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |||||||||||||| || |||||||| ||||||||||||| ||||    
T  12361196 attatttttattcgagagtatcactttccataaatttagcttatg 12361152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 154 - 390
Target Start/End: Complemental strand, 30313 - 30083
Alignment:
Q  154 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtatg 251  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||| |||||| |||| || | |||||||||||||||||  ||| |    
T  30313 tggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatattttgatctaatgttgtgtgaattgaaaaaatagagtgtagg 30214  T
Q  252 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattact 351  Q
    | ||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||| ||| |||||||||        ||||||||||      |    
T  30213 gatcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaactacatgataatga--taaaaataatagtaat------t 30122  T
Q  352 attatttttattcgtgaatatcacttcccataaatttag 390  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  30121 attatttttattcgagaatatcacttcccataaatttag 30083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 26547 - 26405
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 281  Q
    ||||||||||||||| ||| |||||| ||||| || ||   || | |||||||||||||||||||  ||  |||||||||||||| ||||||||||||||    
T  26547 ttggaagattaaacaccaaataattaaactttcatctagagttgtgtgaattgaaaaaatagagtgcggaggtcccacataaaatagaacacacacatta 26448  T
Q  282 gcaatgtttaaattgaggtatttaattttaaatacttgataat 324  Q
    | | ||||||||| ||||||||||||||||||||| |||||||    
T  26447 gtagtgtttaaatagaggtatttaattttaaatacctgataat 26405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 151 - 326
Target Start/End: Complemental strand, 8248 - 8071
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||| ||| ||||| || |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  8248 tgttggaacattgatgcgatgttggatgataaattggaagattaaacaccaagtaattatactttgatttaatgttgtgtgaattgaaaaaatagagtgt 8149  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
      ||||||||||||| || ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  8148 gggggtcccacataagatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 8071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 4e-51; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 17963515 - 17963692
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||| ||| ||| ||||||||||| ||||  | | ||||||||||||||||||| |    
T  17963515 tgtttgaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaactatactttgatctaatgatgtgtgaattgaaaaaatagagtgt 17963614  T
Q  251 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  17963615 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 17963692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 172 - 396
Target Start/End: Original strand, 12405338 - 12405556
Alignment:
Q  172 ttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatgga 269  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||| || | | |||| |||||||||||| ||  | || || ||||||| ||    
T  12405338 ttggaagaaaaattggaagattaaacatcaactaattatattttgatctaatgttgtgttaattaaaaaaatagagtgtggagatcacaaataaaataga 12405437  T
Q  270 acacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaa 369  Q
    ||||||||||||| | || ||||||||||||| ||||||||||||||||||||||||        ||||||||||      |||||||||||||||||||    
T  12405438 acacacacattagtagtgattaaattgaggtacttaattttaaatacttgataatga--taaaaataatagtaat------tattatttttattcgtgaa 12405529  T
Q  370 tatcacttcccataaatttagcctatg 396  Q
    |||||||||||||||||||||| ||||    
T  12405530 tatcacttcccataaatttagcttatg 12405556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 16835118 - 16835296
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa-tagagta 249  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||| ||||||||||| |||| || | |||||| |||||| ||||||     
T  16835118 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaaatatactttgatctaatgttgtgtgaattaaaaaaaatagagtg 16835217  T
Q  250 tggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  16835218 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 16835296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 396
Target Start/End: Original strand, 11533658 - 11533897
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    |||||||||||||  |||||| |||||  | ||||| |||||||||||| ||| |||||||| |||||| |||| || | ||||||||||||||| |||     
T  11533658 ctgttggaacattagtgtgatgttggagaataaattagaagattaaacaccaagtaattatagtttgatctaatgttgtgtgaattgaaaaaataaagtg 11533757  T
Q  250 tggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
    |||| ||||||||||||| ||||||||||||| | | ||||||||||| |||||||||||||||||||||||||||||        ||| | ||||| |     
T  11533758 tggggtcccacataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatga--------taaaaataattgta 11533849  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    | ||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  11533850 attattatttttattcgagaatatcactttccataaatttagcttatg 11533897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 396
Target Start/End: Original strand, 11559168 - 11559407
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    |||||||||||||  |||||| |||||  | ||||| |||||||||||| ||| |||||||| |||||| |||| || | ||||||||||||||| |||     
T  11559168 ctgttggaacattagtgtgatgttggagaataaattagaagattaaacaccaagtaattatagtttgatctaatgttgtgtgaattgaaaaaatacagtg 11559267  T
Q  250 tggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 348  Q
    |||| ||||||||||||| ||||||||||||| | | ||||||||||| |||||||||||||||||||||||||||||        ||| | ||||| |     
T  11559268 tggggtcccacataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatga--------taaaaataattgta 11559359  T
Q  349 actattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    | ||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  11559360 attattatttttattcgagaatatcactttccataaatttagcttatg 11559407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 153 - 396
Target Start/End: Original strand, 20747256 - 20747493
Alignment:
Q  153 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-- 250  Q
    ||||||||||| ||| |  || |||| ||||||||||||||||||||||| ||||||||||||||| |||| || | ||||||||||||||||||| |      
T  20747256 ttggaacattggtgttaagtttgaaggaaaattggaagattaaacatcaagtaattatactttgatttaatgttgtgtgaattgaaaaaatagagtgtgg 20747355  T
Q  251 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 350  Q
    |||||| ||||||||| ||||  ||||||||| | ||||||||||| |||||||||||||||||||||||||| ||         |||||||||          
T  20747356 gggtcctacataaaatagaacttacacattagtagtgtttaaattgcggtatttaattttaaatacttgataacga--taaaaacaatagtaat------ 20747447  T
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  20747448 tattatttttattcgtgaatatcacttcccataaatttagcatatg 20747493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 151 - 396
Target Start/End: Original strand, 11569650 - 11569887
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||  |||||| ||| || | ||||| |||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  11569650 tgttggaacattagtgtgatgttgcaa-ataaattagaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 11569748  T
Q  251 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 349  Q
    ||| ||||||||||||| ||||||||||||| | | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||         
T  11569749 ggggtcccacataaaatagaacacacacattggaagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat----- 11569841  T
Q  350 ctattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
     ||||||||||||||| ||||||||||  ||||||||||||| ||||    
T  11569842 -tattatttttattcgagaatatcactgtccataaatttagcttatg 11569887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 172 - 326
Target Start/End: Complemental strand, 17600495 - 17600342
Alignment:
Q  172 ttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatgga 269  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||| |||| || | ||||||||||||||||||| |  |||||||||||||||| ||    
T  17600495 ttggaagaaaaattggaagattaaacaccaagtaatcatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgagggtcccacataaaataga 17600396  T
Q  270 acacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||| |||||||   ||||||||||| |||||||||||||||||| ||||||||||    
T  17600395 acacaaacattag---tgtttaaattgtggtatttaattttaaataattgataatga 17600342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 172 - 326
Target Start/End: Original strand, 6406838 - 6406994
Alignment:
Q  172 ttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatgga 269  Q
    ||||| ||||||||| ||||||||||| ||| ||||||||||||||| || | || | ||||||||||||||||||| ||||  |||  |||||||| ||    
T  6406838 ttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctattgttgtgtgaattgaaaaaatagagtgtgggggtcctgcataaaataga 6406937  T
Q  270 acacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  6406938 acacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 6406994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 153 - 391
Target Start/End: Original strand, 19994344 - 19994575
Alignment:
Q  153 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg 252  Q
    ||||| ||||| |||||| |||||||||||||||||||||||||||  |  |||||||||||| ||  ||| |||| |||||| |||||||||||| |||    
T  19994344 ttggatcattggtgtgatgttggaagaaaaattggaagattaaacactaggtaattatactttaatcgaatgttatgtgaatt-aaaaaatagagtgtgg 19994442  T
Q  253 g--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 350  Q
    |  |||||| |||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||| ||||        ||||||||||          
T  19994443 gggtcccacgtaaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgattatga--taaaaataatagtaat------ 19994534  T
Q  351 tattatttttattcgtgaatatcacttcccataaatttagc 391  Q
    ||||||||||||||||||||||||||| ||| | |||||||    
T  19994535 tattatttttattcgtgaatatcacttgccaaacatttagc 19994575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 156 - 326
Target Start/End: Original strand, 22694347 - 22694517
Alignment:
Q  156 gaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtc 255  Q
    |||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||  |   ||||    
T  22694347 gaacattggtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagtttggaggtc 22694446  T
Q  256 ccacataaaatggaacacacacat-tagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||||||||| |||||||||||| ||| | |||||||||||  |||||||||| |||| ||||||||||||    
T  22694447 ccacataaaatagaacacacacatctag-agtgtttaaattgccgtatttaattataaaaacttgataatga 22694517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 391
Target Start/End: Original strand, 2699066 - 2699306
Alignment:
Q  146 aaacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaa-ata 244  Q
    ||||||||||||||||   | |||| |||||| | |||||||||||||||||||||| |||||||||||| || |||| || | ||||| | |||| |||    
T  2699066 aaacctgttggaacatcagtatgatgttggaaaataaattggaagattaaacatcaagtaattatactttaatctaatgttgtgtgaatggtaaaatata 2699165  T
Q  245 gagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagta 342  Q
    |||| ||||  ||||||||||||| |||  |||||||||| | ||||||||||| |||||||||||||||||||| |||||| |        ||||||||    
T  2699166 gagtgtgggggtcccacataaaatagaattcacacattagtagtgtttaaattgcggtatttaattttaaatactagataataa--taaaaataatagta 2699263  T
Q  343 attattactattatttttattcgtgaatatcacttcccataaatttagc 391  Q
    ||      ||||||||||||||| |||||||||||||||||||||||||    
T  2699264 at------tattatttttattcgagaatatcacttcccataaatttagc 2699306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 208 - 396
Target Start/End: Original strand, 25313487 - 25313671
Alignment:
Q  208 tatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtattta 305  Q
    |||||||||||||||| || | ||||||||||||||||||| ||  |||| |||||||||| ||||||| | ||||| | ||||||||||| ||||||||    
T  25313487 tatactttgatataatgttttatgaattgaaaaaatagagtgtgcgggtcacacataaaatagaacacatatattagtagtgtttaaattgcggtattta 25313586  T
Q  306 attttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |||||||||||||||||||||        ||||||||||      ||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  25313587 attttaaatacttgataatgataaaaaaataatagtaat------tattatttttattcgagaatatcacttcctataaatttagcttatg 25313671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 208 - 396
Target Start/End: Original strand, 26200981 - 26201165
Alignment:
Q  208 tatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtattta 305  Q
    |||||||||||||||| || | ||||||||||||||||||| ||  |||| |||||||||| ||||||| | ||||| | ||||||||||| ||||||||    
T  26200981 tatactttgatataatgttttatgaattgaaaaaatagagtgtgcgggtcacacataaaatagaacacatatattagtagtgtttaaattgcggtattta 26201080  T
Q  306 attttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |||||||||||||||||||||        ||||||||||      ||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  26201081 attttaaatacttgataatgataaaaaaataatagtaat------tattatttttattcgagaatatcacttcctataaatttagcttatg 26201165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 156 - 326
Target Start/End: Original strand, 33686606 - 33686777
Alignment:
Q  156 gaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-gggt 254  Q
    ||||||| ||||||| |||||| | |||||||||||||||||||||| ||||||||||||||| |||| || | ||||||||||||||||||| | ||||    
T  33686606 gaacattaatgtgatgttggaaaataaattggaagattaaacatcaaataattatactttgatctaattttgtgtgaattgaaaaaatagagtgtggggt 33686705  T
Q  255 cccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
     |||||||||||  |||  ||| ||||| | |||||||| || |||||||| ||||||||||||| ||||||    
T  33686706 tccacataaaataaaacttacaaattagtagtgtttaaactgtggtatttagttttaaatacttggtaatga 33686777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 396
Target Start/End: Original strand, 11612861 - 11613100
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatacttt--gatataatattatctgaattgaaaaaatagagt 248  Q
    |||||||||||||  ||||| ||||||| ||||||| || ||||||||| || ||||||||||||  ||| |||| |||| | |||||||||||||||||    
T  11612861 tgttggaacattg--gtgatgttggaaggaaaattgaaaaattaaacat-aagtaattatactttttgatctaatgttatataaattgaaaaaatagagt 11612957  T
Q  249 atgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatta 346  Q
     | |  ||||||||||||||  |||||||||||||| | ||||||||||  |||||||||||||||||||||||||||||        ||||||| ||||    
T  11612958 gttgaggtcccacataaaataaaacacacacattagtagtgtttaaatttcggtatttaattttaaatacttgataatga--taaaaataatagtgatta 11613055  T
Q  347 ttactattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
         |||| |||||||||||||||||| || ||||||||||||| ||||    
T  11613056 -----attaattttattcgtgaatatcattttccataaatttagcttatg 11613100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 315
Target Start/End: Complemental strand, 12690074 - 12689942
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg-gtcccacataaaatggaacacacacattag 282  Q
    |||||| |||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  12690074 ttggaaaattaaacaccaaattattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggagtcccacataaaatagaacacacacattag 12689975  T
Q  283 caatgtttaaattgaggtatttaattttaaata 315  Q
     | ||||||||| | ||||||||||||||||||    
T  12689974 tagtgtttaaatagcggtatttaattttaaata 12689942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 153 - 313
Target Start/End: Complemental strand, 11429094 - 11428933
Alignment:
Q  153 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-- 250  Q
    |||||||||||||||  | ||||| ||||||||||||||||||||| ||  ||||||||||||||| |||| ||   ||||||||||||||||||| |      
T  11429094 ttggaacattgatgtacttttggatgaaaaattggaagattaaacaccagataattatactttgatctaatgttgcgtgaattgaaaaaatagagtgtgg 11428995  T
Q  251 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaa 313  Q
    ||||||||||| |||| || |||||||||| | | | |||||| || ||| ||||||||||||    
T  11428994 gggtcccacattaaatagagcacacacatttgtagtatttaaactgcggt-tttaattttaaa 11428933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 12797772 - 12797914
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtatgggtcccacataaaatgga----acacacac 277  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | |||||||||||||||||  || ||||||||||||||||| ||    ||||||||    
T  12797772 ttggaagattaaacaccaagtaattagactttgatctagtgttgtgtgaattgaaaaaatagagtgtgtgggtcccacataaaatagaaaacacacacac 12797871  T
Q  278 attagcaatgtttaaattgaggtatttaattttaaatacttga 320  Q
    | ||| | ||||||||| | |||||||||||||||||||||||    
T  12797872 actagtagtgtttaaatagtggtatttaattttaaatacttga 12797914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 396
Target Start/End: Complemental strand, 5857022 - 5856885
Alignment:
Q  251 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 350  Q
    |||||||||||||| | ||||| ||||||||| | ||||||||||| |||||||||||||||||| ||||||||||        ||||||||||          
T  5857022 gggtcccacataaactagaacatacacattagtagtgtttaaattgcggtatttaattttaaataattgataatga--taaaaataatagtaat------ 5856931  T
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    | ||||||||||||| ||||||||||||||| ||||||||| ||||    
T  5856930 tgttatttttattcgagaatatcacttcccaaaaatttagcttatg 5856885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 22610568 - 22610473
Alignment:
Q  233 attgaaaaaatagagtatgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||||||||||||| | |||  || |||||||||||  |||||||||||||| | ||||||||||  |||||||||||||||||||||||||||||    
T  22610568 attgaaaaaatagattgtggcagttccacataaaataaaacacacacattagtagtgtttaaattttggtatttaattttaaatacttgataatga 22610473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 19674874 - 19674735
Alignment:
Q  188 aagattaaacatcaactaattatactttgatataatattatctgaattg-aaaaaatagagtatgggtcccacataaaatggaacacacacattagcaat 286  Q
    ||||||||||| ||| |||||| |||||||| || | || | ||||||| ||||||||| ||  |||||| ||||||||| |||||||||||| || | |    
T  19674874 aagattaaacaccaaataattaaactttgatctagtgttgtgtgaattggaaaaaatagtgtgggggtccgacataaaatagaacacacacatcagtagt 19674775  T
Q  287 gtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||||||   | ||||||||||||||||| | |||||||    
T  19674774 gtttaaataatgatatttaattttaaatacctaataatga 19674735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 390
Target Start/End: Complemental strand, 17914628 - 17914498
Alignment:
Q  252 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattact 351  Q
    ||||| ||||||||||||||||||||||||  | ||||| ||||  ||||||||||||||||||| |||| ||||        |||||| |||      |    
T  17914628 ggtcctacataaaatggaacacacacattaatagtgttttaattacggtatttaattttaaatacctgatgatga--taaaaataatagcaat------t 17914537  T
Q  352 attatttttattcgtgaatatcacttcccataaatttag 390  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  17914536 attatttttatttgtgaatatcacttcccataaatttag 17914498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 11428911 - 11428866
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  11428911 tattatttttattcgtgaatatcacttcccataaatttagcttatg 11428866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 5857096 - 5857033
Alignment:
Q  153 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttga 217  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  5857096 ttggaacattagtgtgatgttggaagaaaaattggaagattaaacaccaa-taattatactttga 5857033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 4156486 - 4156531
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  4156486 tattatttttattcgagaatatcacttccgataaatttagcttatg 4156531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 14509979 - 14509941
Alignment:
Q  286 tgtttaaattgaggtatttaattttaaatacttgataat 324  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  14509979 tgtttaaattgtggtatttaattttaaatacttaataat 14509941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 29891917 - 29891991
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaa-attggaagattaaacatcaactaattatactttgatataat 223  Q
    ||||| |||||||| |||||| ||| ||||||| ||||||||||||||||  || ||||| ||||||||| ||||    
T  29891917 ctgttagaacattggtgtgatgttgaaagaaaaaattggaagattaaacacaaagtaattgtactttgatctaat 29891991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 396
Target Start/End: Original strand, 22694518 - 22694559
Alignment:
Q  355 atttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||    
T  22694518 atttttattcgtgaatatcacttaccatatatttagcttatg 22694559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 150 - 322
Target Start/End: Original strand, 40124850 - 40125024
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||| ||||||||||| |||| || | |||||||||||||||||||     
T  40124850 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaaatatactttgatctaatgttgtgtgaattgaaaaaatagagtg 40124949  T
Q  250 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 322  Q
    |  ||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  40124950 tgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 40125024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 172 - 389
Target Start/End: Original strand, 38181260 - 38181471
Alignment:
Q  172 ttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatgga 269  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| |||| || | ||||||||||||||| ||| || |  ||||||||||||| ||    
T  38181260 ttggaagaaaaattggaacattaaacatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaataaagtgtgagagtcccacataaaataga 38181359  T
Q  270 acacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaa 369  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||      ||||||||||||||| |||    
T  38181360 acacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat------tattatttttattcgagaa 38181451  T
Q  370 tatcacttcccataaattta 389  Q
    || |||||||||||||||||    
T  38181452 taccacttcccataaattta 38181471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 165 - 389
Target Start/End: Complemental strand, 2966710 - 2966492
Alignment:
Q  165 tgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacata 262  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| ||| || |||| ||||  |||||||||||||||||| ||  ||||||| |||    
T  2966710 tgtgatgttggaagaaaaattggaagattaaacatcaaataattatatttttatctaatgttatgggaattgaaaaaatagagtgtgagggtcccatata 2966611  T
Q  263 aaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttat 362  Q
    |||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||||        | ||||||||      ||||||||||||    
T  2966610 aaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttaataatga--taaaaattatagtaat------tattatttttat 2966519  T
Q  363 tcgtgaatatcacttcccataaattta 389  Q
    ||||||||||||||||| |||||||||    
T  2966518 tcgtgaatatcacttcctataaattta 2966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 151 - 326
Target Start/End: Complemental strand, 1808589 - 1808413
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||  |||||| |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||| ||| |    
T  1808589 tgttggaacattagtgtgatgttggaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatatagtgt 1808490  T
Q  251 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||| ||||| ||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||    
T  1808489 ggggtcccatataaaatagaacacacacattagaagtgtttaaattgcggtatttaattttaaatatttgataatga 1808413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 154 - 391
Target Start/End: Original strand, 15950528 - 15950766
Alignment:
Q  154 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatc----aactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||| |    || ||||||||||||||| |||| || | |||||||||||||||||||     
T  15950528 tggaacattgatgtgatgttggatgaaaaattggaagactaaacaccaagtaattaattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 15950627  T
Q  250 tg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga-gnnnnnnntaatagtaatta 346  Q
    ||  ||| ||||||||||| ||||||||||||||  | ||||||||||| ||||||||||||||||||||||||||||| |       ||||||||||      
T  15950628 tggaggtgccacataaaatagaacacacacattaatagtgtttaaattgcggtatttaattttaaatacttgataatgatgataaaaataatagtaat-- 15950725  T
Q  347 ttactattatttttattcgtgaatatcacttcccataaatttagc 391  Q
        ||||||||||||||| ||||||||||||||||| |||||||    
T  15950726 ----tattatttttattcgagaatatcacttcccatatatttagc 15950766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 150 - 326
Target Start/End: Original strand, 44924877 - 44925055
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    |||||||||||||  |||||| |||||| | ||||||||||||||||||  ||  |||||||||||||| |||| || | |||||||||||| ||||||     
T  44924877 ctgttggaacattagtgtgatgttggaaaataaattggaagattaaacactaatcaattatactttgatctaatcttgtgtgaattgaaaaattagagtt 44924976  T
Q  250 tgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||  |||||||||||||| ||| ||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  44924977 tggaggtcccacataaaatagaaaacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 44925055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 1909904 - 1910081
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||  | |||| |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  1909904 tgttggaacattagtatgatgttggaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 1910003  T
Q  251 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||  ||||||||| |||| || | |||||||||| | ||||||||  | |||||||||||||||||||||||||||||    
T  1910004 ggatgtcccacatgaaatagagctcacacattagtagtgtttaaacagtggtatttaattttaaatacttgataatga 1910081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 28559074 - 28559250
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||| |||||||| || || |||||||||||||||||||||||| ||| || ||||||||| || |||| || | |  || ||||||||||||| |    
T  28559074 tgttggaaaattgatgtaatgttcgaagaaaaattggaagattaaacaccaaata-ttatactttaatctaatgttgtgtacatggaaaaaatagagtgt 28559172  T
Q  251 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||  |||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||    
T  28559173 ggaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatga 28559250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 326
Target Start/End: Complemental strand, 26780234 - 26780066
Alignment:
Q  159 cattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggt--cc 256  Q
    ||||||||| || ||||||||||||||  |||||||||||  || |||||||||| | || |||| || | |||||||||||  |||||| |||||  ||    
T  26780234 cattgatgtaatgttggaagaaaaattaaaagattaaacactaagtaattatactctaatttaatgttgtgtgaattgaaaac-tagagtgtgggtgtcc 26780136  T
Q  257 cacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  26780135 cacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 26780066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 154 - 326
Target Start/End: Original strand, 28564258 - 28564429
Alignment:
Q  154 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg 253  Q
    ||||||||| || | || ||||||||||||||||||||||||||| ||| || |||||||||||| |||| || | |  ||||||||||||| ||   ||    
T  28564258 tggaacattcatataatgttggaagaaaaattggaagattaaacaccaaata-ttatactttgatctaatgttgtgtacattgaaaaaatagtgtggagg 28564356  T
Q  254 tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    | ||||||||||| ||||||||||||||| | ||||||||||  |||||||||||||||||| ||||||||||    
T  28564357 ttccacataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaatatttgataatga 28564429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 166 - 326
Target Start/End: Original strand, 18875357 - 18875519
Alignment:
Q  166 gtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataa 263  Q
    ||||| ||||||||||||||||||||||||| |   | |||||| | |||||| |||| || | |||||||||||||||| || |  ||||||||||||     
T  18875357 gtgatgttggaagaaaaattggaagattaaatactgagtaattaaattttgatctaatgttgtgtgaattgaaaaaatagtgtgtaggggtcccacatac 18875456  T
Q  264 aatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||| ||||||||| ||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  18875457 aatagaacacacatattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 18875519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 33417590 - 33417492
Alignment:
Q  230 tgaattgaaaaaatagagt--atgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    |||||||||||||||||||  ||||||| |||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  33417590 tgaattgaaaaaatagagtgtatgggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 33417492  T

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Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 151 - 310
Target Start/End: Complemental strand, 7002783 - 7002623
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||| |||||  ||  ||||||| ||| ||||||||||| ||| |||||| |||||||| || |||| | ||||||||||||||||||| |    
T  7002783 tgttggaacattggtgtgaagtttaaagaaaa-ttgaaagattaaacaccaagtaattagactttgatctagtattgtgtgaattgaaaaaatagagtgt 7002685  T
Q  251 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttt 310  Q
    |||  || |||||||||| ||| ||| ||||||| | ||||||||||| |||||||||||||    
T  7002684 ggggatctcacataaaatagaatacatacattagtagtgtttaaattgtggtatttaatttt 7002623  T

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Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 301
Target Start/End: Complemental strand, 17021348 - 17021243
Alignment:
Q  197 catcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg-tcccacataaaatggaacacacacattagcaatgtttaaatt 295  Q
    |||||| ||||||||||||||| |||| || | ||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| | ||||||||||    
T  17021348 catcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtggggtcccacataaaatagaacacacacattagtagtgtttaaatt 17021249  T
Q  296 gaggta 301  Q
    | ||||    
T  17021248 gcggta 17021243  T

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Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 301
Target Start/End: Complemental strand, 17551785 - 17551680
Alignment:
Q  197 catcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg-tcccacataaaatggaacacacacattagcaatgtttaaatt 295  Q
    |||||| ||||||||||||||| |||| || | ||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| | ||||||||||    
T  17551785 catcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtggggtcccacataaaatagaacacacacattagtagtgtttaaatt 17551686  T
Q  296 gaggta 301  Q
    | ||||    
T  17551685 gcggta 17551680  T

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Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 33417651 - 33417603
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaaca 198  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  33417651 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaaca 33417603  T

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Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 23547568 - 23547738
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||||||||| | | || ||| ||||||||||| ||||||||||||  | |||||||| ||| || |||| ||   ||||| ||||||||||| |||    
T  23547568 tgttggaacattggtttaatgttgaaagaaaaattgaaagattaaacattgaataattatattttaatctaatgttgcatgaatcgaaaaaatagaatat 23547667  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
      ||||| |||||||| | ||||||| |  |||      ||||||||| |||||||||||||||||||||||||||||    
T  23547668 cggggtctcacataaattagaacacata--ttaa-----tttaaattgcggtatttaattttaaatacttgataatga 23547738  T

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Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 19168710 - 19168665
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||    
T  19168710 tattatttttattctagaatatcacttcccataaatttagcttatg 19168665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 22714149 - 22714194
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||    
T  22714149 tattatttttattcatggatatcacttcccataaatttagcttatg 22714194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 17027226 - 17027165
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaag-aaaaattggaagattaaacatcaactaattata 211  Q
    ||||||||||||| ||||||| ||||| | |||||||||||||||||||| ||| ||||||||    
T  17027226 ctgttggaacattaatgtgatgttggatgaaaaaattggaagattaaacaccaa-taattata 17027165  T

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Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 17557718 - 17557657
Alignment:
Q  150 ctgttggaacattgatgtgatcttggaag-aaaaattggaagattaaacatcaactaattata 211  Q
    ||||||||||||| ||||||| ||||| | |||||||||||||||||||| ||| ||||||||    
T  17557718 ctgttggaacattaatgtgatgttggatgaaaaaattggaagattaaacaccaa-taattata 17557657  T

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Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 389
Target Start/End: Original strand, 44925072 - 44925110
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaattta 389  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  44925072 tattatttttattcgagaatatcatttcccataaattta 44925110  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 17953183 - 17953267
Alignment:
Q  230 tgaattgaaaaaatagagtat-gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaat 314  Q
    ||||||||||||||||||| | |||| ||||| ||||| |||||||||||| || | ||||| ||| | ||||||| |||||||||    
T  17953183 tgaattgaaaaaatagagtgtggggtaccacaaaaaatagaacacacacatcagtagtgttt-aatagtggtattttattttaaat 17953267  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 326
Target Start/End: Original strand, 24672364 - 24672453
Alignment:
Q  237 aaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
    ||||||||||||  |||||||| ||||||| || ||| || || |  | ||||||||||| | ||||||||| ||||||||| |||||||    
T  24672364 aaaaaatagagtgggggtcccaaataaaatagagcacgcagatcaatagtgtttaaattgtgatatttaattgtaaatacttaataatga 24672453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 391
Target Start/End: Complemental strand, 17027086 - 17027046
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagc 391  Q
    ||||||||||||||| |||||||||||  ||||||||||||    
T  17027086 tattatttttattcgagaatatcacttttcataaatttagc 17027046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 391
Target Start/End: Complemental strand, 17557578 - 17557538
Alignment:
Q  351 tattatttttattcgtgaatatcacttcccataaatttagc 391  Q
    ||||||||||||||| |||||||||||  ||||||||||||    
T  17557578 tattatttttattcgagaatatcacttttcataaatttagc 17557538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 326
Target Start/End: Complemental strand, 33100623 - 33100550
Alignment:
Q  252 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttt-aaatacttgataatga 326  Q
    ||||||||||||||| ||| |||||  |||  ||| |||||||||  |||||||||||| ||||||||||||||||    
T  33100623 ggtcccacataaaatagaatacaca--ttaataatctttaaattgcagtatttaatttttaaatacttgataatga 33100550  T

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Target: scaffold0002 (Bit Score: 91; Significance: 6e-44; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 151 - 322
Target Start/End: Complemental strand, 5203 - 5030
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| | | ||||||||||| |||| || | ||||||||||||||||||| |    
T  5203 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagttaatatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 5104  T
Q  251 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 322  Q
      ||||||| |||||||| |||||| |||||||| | ||||||||||| |||||||||||||||||||||||||    
T  5103 gggggtcccgcataaaatagaacactcacattagtagtgtttaaattgtggtatttaattttaaatacttgata 5030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 442897 - 443073
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    |||||||| |||  |||||| |||||| | ||||||||||||||||||| || ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  442897 tgttggaatattactgtgatgttggaaaataaattggaagattaaacattaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 442996  T
Q  251 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 326  Q
     |||||||||||||||| |||||||||||||||    |||||||||| |||||||||||||||||| ||||||||||    
T  442997 ggggtcccacataaaatagaacacacacattagttgggtttaaattgtggtatttaattttaaatatttgataatga 443073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 396
Target Start/End: Complemental strand, 6372 - 6132
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaa-ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 249  Q
    ||||||||||||| || ||| |||||||||||| ||  || |||||||| ||| ||||||||||| ||| |||| |||| |||||||||||||||||||     
T  6372 tgttggaacattggtgcgatgttggaagaaaaaattataaaattaaacaccaagtaattatacttcgatctaatgttatgtgaattgaaaaaatagagtg 6273  T
Q  250 tgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 347  Q
    | |  ||||||||||| || ||| |||||||||||   ||||||||||| |||||||||||||||||||||||||||||        ||||||||||       
T  6272 ttgaggtcccacataagatagaatacacacattagtggtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaat--- 6178  T
Q  348 tactattatttttattcgtgaatatcacttcccataaatttagcctatg 396  Q
       ||||||||||||||||||||||||||||||||||||||||| ||||    
T  6177 ---tattatttttattcgtgaatatcacttcccataaatttagcttatg 6132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 151 - 390
Target Start/End: Complemental strand, 5108 - 4877
Alignment:
Q  151 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 250  Q
    ||||||| ||||| |||||| ||||||||||||||| ||||||||||| ||  ||||||||||||||| |||| || | ||||||||||||||| ||| |    
T  5108 tgttggatcattggtgtgatgttggaagaaaaattgaaagattaaacaccacgtaattatactttgatctaatgttgtgtgaattgaaaaaatatagtgt 5009  T
Q  251 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 349  Q
     |||| |||||||||||  |  ||||| |||||   ||||||| ||| |||||||||||||||||||||||||||||        ||||||||||         
T  5008 ggggtaccacataaaat--ataacacatattagttgtgtttaagttgcggtatttaattttaaatacttgataatga-taaaaaataatagtaat----- 4917  T
Q  350 ctattatttttattcgtgaatatcacttcccataaatttag 390  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  4916 -tattatttttattcgtgaatatcacttcccataaatttag 4877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 154 - 391
Target Start/End: Complemental strand, 36257 - 36027
Alignment:
Q  154 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg 253  Q
    |||||||||  |||||| ||| || | |||||| ||||||||||| ||| |||||||| |||||| |||| || | ||||||||||||||||||| ||||    
T  36257 tggaacattagtgtgatgttgaaaaataaattgaaagattaaacaccaaataattatattttgatctaatgttgtatgaattgaaaaaatagagtgtggg 36158  T
Q  254 tccc-acataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattacta 352  Q
     ||| ||||||||| |||| ||| |||||| | |||||||| || |||||||||||||||||| ||||||||||        ||||||||||      ||    
T  36157 gccccacataaaatagaactcacgcattagtagtgtttaaactgcggtatttaattttaaatatttgataatga--taaaaataatagtaat------ta 36066  T
Q  353 ttatttttattcgtgaatatcacttcccataaatttagc 391  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  36065 ttatttttatttgtgaatatcacttcccataaatttagc 36027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 311
Target Start/End: Original strand, 64885 - 65013
Alignment:
Q  184 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacatta 281  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | |||||| |||||||||||| |  |||||||||||||||| ||||||||||||||    
T  64885 ttggaagattaaaca-caagtaattaaactttgatctagtgttgtgtgaattaaaaaaatagagtgtaggggtcccacataaaatagaacacacacatta 64983  T
Q  282 gcaatgtttaaattgaggtatttaatttta 311  Q
    | | | ||||||| | ||||||||| ||||    
T  64984 gtagtctttaaatagtggtatttaaattta 65013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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