View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3705_low_20 (Length: 242)

Name: NF3705_low_20
Description: NF3705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3705_low_20
NF3705_low_20
[»] chr3 (82 HSPs)
chr3 (125-237)||(39417048-39417160)
chr3 (125-237)||(48087652-48087764)
chr3 (125-240)||(25576691-25576806)
chr3 (125-240)||(46414434-46414549)
chr3 (125-232)||(41577918-41578025)
chr3 (125-240)||(47065691-47065806)
chr3 (125-240)||(51013378-51013493)
chr3 (125-239)||(13895970-13896084)
chr3 (125-239)||(44835587-44835701)
chr3 (125-238)||(44927469-44927582)
chr3 (134-238)||(8633468-8633572)
chr3 (130-238)||(34647372-34647480)
chr3 (125-237)||(45100565-45100677)
chr3 (141-240)||(30192542-30192641)
chr3 (125-240)||(41803906-41804021)
chr3 (125-240)||(42382275-42382390)
chr3 (125-240)||(42383055-42383170)
chr3 (125-240)||(53826796-53826911)
chr3 (130-239)||(49273404-49273513)
chr3 (125-237)||(34472176-34472288)
chr3 (125-237)||(51015284-51015396)
chr3 (125-240)||(42950120-42950235)
chr3 (125-240)||(43569914-43570029)
chr3 (125-239)||(10053371-10053485)
chr3 (125-237)||(2268594-2268706)
chr3 (47-123)||(2283998-2284074)
chr3 (47-123)||(32426871-32426947)
chr3 (136-240)||(47760002-47760106)
chr3 (125-240)||(2428491-2428606)
chr3 (125-240)||(2646976-2647091)
chr3 (125-240)||(3495129-3495244)
chr3 (125-240)||(4004187-4004302)
chr3 (125-240)||(14631449-14631564)
chr3 (125-240)||(43477061-43477176)
chr3 (125-240)||(49610493-49610608)
chr3 (125-239)||(36135013-36135126)
chr3 (125-238)||(6754210-6754323)
chr3 (47-123)||(4119736-4119812)
chr3 (141-237)||(33449255-33449351)
chr3 (125-237)||(37281459-37281571)
chr3 (50-122)||(40467153-40467225)
chr3 (47-123)||(51547475-51547551)
chr3 (125-240)||(55206984-55207099)
chr3 (130-240)||(19453334-19453444)
chr3 (135-237)||(24702382-24702483)
chr3 (125-214)||(7246124-7246213)
chr3 (125-238)||(34693390-34693503)
chr3 (136-236)||(6464456-6464556)
chr3 (125-204)||(42323489-42323568)
chr3 (125-240)||(46403007-46403122)
chr3 (125-240)||(49140154-49140269)
chr3 (125-240)||(51695706-51695821)
chr3 (125-240)||(52569509-52569623)
chr3 (125-240)||(54390446-54390561)
chr3 (131-237)||(36721495-36721601)
chr3 (125-239)||(49218836-49218950)
chr3 (47-123)||(33940884-33940960)
chr3 (125-240)||(27186952-27187067)
chr3 (125-240)||(34049731-34049846)
chr3 (125-238)||(7954209-7954323)
chr3 (47-107)||(10286209-10286269)
chr3 (150-237)||(15637031-15637118)
chr3 (47-122)||(9555706-9555781)
chr3 (145-240)||(14265412-14265507)
chr3 (49-123)||(4511168-4511242)
chr3 (1-47)||(15926664-15926710)
chr3 (145-233)||(20376002-20376090)
chr3 (125-240)||(50458791-50458906)
chr3 (141-238)||(774454-774551)
chr3 (125-179)||(50997453-50997507)
chr3 (1-38)||(16082811-16082848)
chr3 (182-239)||(46346737-46346794)
chr3 (1-37)||(94496-94532)
chr3 (1-37)||(103358-103394)
chr3 (190-238)||(11378909-11378957)
chr3 (3-38)||(8854068-8854103)
chr3 (1-47)||(12206640-12206687)
chr3 (3-38)||(26900550-26900585)
chr3 (5-38)||(8856915-8856948)
chr3 (1-38)||(16091987-16092024)
chr3 (1-45)||(54110957-54111002)
chr3 (1-33)||(15417868-15417900)
[»] chr5 (39 HSPs)
chr5 (125-239)||(40009518-40009632)
chr5 (125-240)||(18308249-18308364)
chr5 (125-240)||(8537943-8538058)
chr5 (125-240)||(19400352-19400467)
chr5 (130-240)||(36350413-36350523)
chr5 (125-238)||(1400405-1400518)
chr5 (124-240)||(3601330-3601446)
chr5 (125-240)||(7332-7447)
chr5 (125-240)||(541738-541853)
chr5 (125-238)||(1971356-1971469)
chr5 (133-237)||(3458828-3458932)
chr5 (125-240)||(4724177-4724292)
chr5 (125-240)||(11346698-11346813)
chr5 (124-240)||(3169593-3169708)
chr5 (125-240)||(8576244-8576359)
chr5 (125-238)||(33370645-33370758)
chr5 (50-119)||(42344534-42344603)
chr5 (141-237)||(11027769-11027865)
chr5 (125-240)||(35565261-35565375)
chr5 (50-123)||(11820259-11820332)
chr5 (47-123)||(6553832-6553908)
chr5 (125-233)||(30709594-30709702)
chr5 (141-237)||(38854150-38854246)
chr5 (125-240)||(19036777-19036892)
chr5 (125-240)||(28880980-28881095)
chr5 (142-237)||(17366856-17366950)
chr5 (125-240)||(27661480-27661595)
chr5 (125-240)||(6793489-6793604)
chr5 (125-215)||(35927540-35927630)
chr5 (155-228)||(1693382-1693455)
chr5 (145-238)||(12805524-12805617)
chr5 (160-238)||(2599210-2599288)
chr5 (140-238)||(12742706-12742804)
chr5 (190-240)||(7082281-7082331)
chr5 (1-48)||(27073828-27073876)
chr5 (1-47)||(8460307-8460354)
chr5 (1-47)||(20675357-20675404)
chr5 (1-47)||(20675687-20675734)
chr5 (1-48)||(20671133-20671181)
[»] chr1 (71 HSPs)
chr1 (125-237)||(48568505-48568617)
chr1 (125-240)||(18170015-18170130)
chr1 (122-240)||(24270461-24270579)
chr1 (125-237)||(41874985-41875097)
chr1 (125-240)||(14173859-14173974)
chr1 (125-240)||(42571877-42571992)
chr1 (125-232)||(47488138-47488245)
chr1 (131-240)||(6435762-6435871)
chr1 (125-238)||(35576331-35576444)
chr1 (125-237)||(48215191-48215303)
chr1 (125-240)||(12791374-12791489)
chr1 (125-240)||(29435963-29436078)
chr1 (125-240)||(38046535-38046650)
chr1 (133-240)||(27035427-27035534)
chr1 (125-240)||(35587030-35587145)
chr1 (125-239)||(29762322-29762436)
chr1 (125-238)||(18842431-18842544)
chr1 (125-237)||(21484744-21484856)
chr1 (47-123)||(27284083-27284159)
chr1 (125-240)||(13972914-13973029)
chr1 (125-240)||(39224298-39224413)
chr1 (125-239)||(36909552-36909666)
chr1 (125-238)||(13283697-13283810)
chr1 (125-237)||(23342634-23342746)
chr1 (125-237)||(30309927-30310039)
chr1 (125-237)||(35184963-35185075)
chr1 (125-240)||(17686462-17686577)
chr1 (141-240)||(44597691-44597790)
chr1 (125-238)||(39857007-39857120)
chr1 (143-240)||(49598993-49599090)
chr1 (141-237)||(13635414-13635510)
chr1 (47-123)||(36359462-36359538)
chr1 (125-208)||(46180381-46180465)
chr1 (125-240)||(17697036-17697151)
chr1 (125-240)||(41780683-41780798)
chr1 (125-240)||(44337420-44337535)
chr1 (125-240)||(51269792-51269907)
chr1 (125-215)||(49427402-49427492)
chr1 (125-238)||(49263089-49263202)
chr1 (47-123)||(7404663-7404739)
chr1 (125-240)||(27486791-27486906)
chr1 (125-240)||(50068360-50068475)
chr1 (134-228)||(3658475-3658569)
chr1 (134-240)||(19160307-19160413)
chr1 (125-238)||(5765198-5765311)
chr1 (141-238)||(35526294-35526391)
chr1 (125-206)||(37778103-37778184)
chr1 (125-237)||(45689114-45689224)
chr1 (47-123)||(28863933-28864009)
chr1 (125-237)||(49396697-49396809)
chr1 (127-238)||(16532193-16532304)
chr1 (125-240)||(49926481-49926595)
chr1 (141-227)||(24363917-24364003)
chr1 (66-123)||(20240718-20240775)
chr1 (170-238)||(16098078-16098146)
chr1 (125-215)||(16081300-16081390)
chr1 (142-240)||(17372717-17372815)
chr1 (141-184)||(13148365-13148408)
chr1 (1-38)||(15142606-15142643)
chr1 (1-37)||(12020180-12020216)
chr1 (1-37)||(18433328-18433364)
chr1 (1-37)||(20442649-20442685)
chr1 (1-37)||(20514510-20514546)
chr1 (3-38)||(15158032-15158067)
chr1 (3-38)||(19749659-19749694)
chr1 (3-38)||(19751885-19751920)
chr1 (3-38)||(20435197-20435232)
chr1 (3-38)||(36910431-36910466)
chr1 (180-238)||(15471510-15471568)
chr1 (3-37)||(24276784-24276818)
chr1 (3-37)||(24280897-24280931)
[»] chr7 (45 HSPs)
chr7 (142-237)||(41217609-41217704)
chr7 (125-240)||(43351199-43351314)
chr7 (125-240)||(18237556-18237671)
chr7 (130-232)||(48220847-48220949)
chr7 (125-240)||(26603305-26603420)
chr7 (125-240)||(47268891-47269005)
chr7 (122-240)||(28114490-28114608)
chr7 (125-240)||(17839315-17839430)
chr7 (125-240)||(20378803-20378918)
chr7 (125-240)||(39477340-39477455)
chr7 (125-239)||(2356282-2356396)
chr7 (125-237)||(30360512-30360624)
chr7 (135-239)||(34140858-34140962)
chr7 (132-240)||(46862301-46862409)
chr7 (125-240)||(48270640-48270755)
chr7 (125-239)||(40588542-40588656)
chr7 (47-123)||(25569597-25569673)
chr7 (125-237)||(36393924-36394036)
chr7 (47-123)||(40442470-40442546)
chr7 (47-123)||(43378250-43378326)
chr7 (125-240)||(21187399-21187514)
chr7 (125-240)||(42735255-42735369)
chr7 (125-239)||(10523061-10523175)
chr7 (125-239)||(41048776-41048890)
chr7 (125-237)||(28979122-28979234)
chr7 (47-123)||(46792368-46792444)
chr7 (125-215)||(30354915-30355005)
chr7 (50-123)||(1298029-1298102)
chr7 (125-238)||(21614860-21614973)
chr7 (130-238)||(21650518-21650626)
chr7 (125-240)||(15338005-15338120)
chr7 (125-240)||(20564751-20564866)
chr7 (125-240)||(48315280-48315395)
chr7 (125-239)||(17183205-17183319)
chr7 (136-240)||(42682948-42683052)
chr7 (47-123)||(45168199-45168275)
chr7 (125-240)||(45363343-45363458)
chr7 (142-240)||(13916825-13916923)
chr7 (125-238)||(1642687-1642800)
chr7 (1-38)||(44357144-44357181)
chr7 (1-38)||(44360266-44360303)
chr7 (1-37)||(11544872-11544908)
chr7 (198-237)||(8726391-8726430)
chr7 (3-37)||(23532465-23532499)
chr7 (2-39)||(37278672-37278709)
[»] chr2 (44 HSPs)
chr2 (125-240)||(12968399-12968514)
chr2 (125-240)||(22493265-22493380)
chr2 (125-240)||(2919462-2919577)
chr2 (125-240)||(10364734-10364849)
chr2 (125-240)||(19471731-19471846)
chr2 (125-240)||(35491629-35491744)
chr2 (125-232)||(42120014-42120121)
chr2 (125-235)||(18392032-18392146)
chr2 (125-237)||(29111155-29111267)
chr2 (136-232)||(29906584-29906680)
chr2 (125-240)||(3941731-3941846)
chr2 (125-240)||(32734641-32734756)
chr2 (125-240)||(34521781-34521896)
chr2 (125-240)||(41499191-41499306)
chr2 (125-240)||(42241196-42241311)
chr2 (125-235)||(10360296-10360406)
chr2 (125-238)||(5420465-5420578)
chr2 (125-238)||(27130606-27130719)
chr2 (125-238)||(37312592-37312705)
chr2 (122-238)||(20148114-20148230)
chr2 (125-240)||(16581816-16581931)
chr2 (125-240)||(6976832-6976945)
chr2 (125-237)||(33404012-33404124)
chr2 (125-240)||(39393885-39394000)
chr2 (125-238)||(6901962-6902075)
chr2 (125-238)||(17796201-17796314)
chr2 (141-237)||(39799955-39800051)
chr2 (125-240)||(3937161-3937276)
chr2 (125-240)||(22001828-22001943)
chr2 (125-240)||(34638960-34639074)
chr2 (125-240)||(43982850-43982965)
chr2 (125-239)||(17424784-17424898)
chr2 (125-237)||(29067726-29067838)
chr2 (50-123)||(28422418-28422491)
chr2 (47-99)||(9638766-9638818)
chr2 (145-236)||(16253474-16253565)
chr2 (170-237)||(31770360-31770427)
chr2 (176-240)||(40678763-40678827)
chr2 (130-180)||(40677477-40677527)
chr2 (3-38)||(5771999-5772034)
chr2 (3-38)||(26126037-26126072)
chr2 (10-38)||(7310838-7310866)
chr2 (1-37)||(23692874-23692910)
chr2 (1-37)||(23696661-23696697)
[»] chr8 (43 HSPs)
chr8 (125-232)||(33799650-33799757)
chr8 (125-240)||(40415257-40415372)
chr8 (125-237)||(26484580-26484692)
chr8 (125-240)||(28706241-28706356)
chr8 (125-232)||(43638776-43638883)
chr8 (122-240)||(18440391-18440509)
chr8 (125-240)||(41857073-41857188)
chr8 (125-239)||(19242261-19242375)
chr8 (125-239)||(19315445-19315559)
chr8 (125-240)||(15032423-15032538)
chr8 (125-240)||(26452325-26452440)
chr8 (125-240)||(40414610-40414725)
chr8 (125-240)||(43693137-43693252)
chr8 (125-240)||(44943180-44943295)
chr8 (125-238)||(34614955-34615068)
chr8 (125-238)||(41363658-41363771)
chr8 (125-237)||(38034024-38034136)
chr8 (47-123)||(43611245-43611321)
chr8 (47-123)||(44321881-44321957)
chr8 (125-240)||(41275394-41275509)
chr8 (125-240)||(42603454-42603569)
chr8 (125-239)||(24861344-24861458)
chr8 (125-238)||(42169059-42169172)
chr8 (125-240)||(22548263-22548378)
chr8 (50-123)||(45117972-45118045)
chr8 (141-237)||(16575695-16575791)
chr8 (125-240)||(485357-485472)
chr8 (125-240)||(2416915-2417030)
chr8 (125-240)||(40702360-40702475)
chr8 (136-238)||(31171926-31172028)
chr8 (47-123)||(23222539-23222615)
chr8 (145-238)||(3589385-3589478)
chr8 (1-38)||(20131765-20131802)
chr8 (1-38)||(20134890-20134927)
chr8 (1-37)||(21945932-21945968)
chr8 (3-38)||(3303299-3303334)
chr8 (3-38)||(14676712-14676747)
chr8 (3-38)||(21408502-21408537)
chr8 (3-38)||(21802994-21803029)
chr8 (3-38)||(21834965-21835000)
chr8 (4-47)||(17007930-17007974)
chr8 (4-47)||(17540976-17541020)
chr8 (1-37)||(31709045-31709081)
[»] chr4 (66 HSPs)
chr4 (125-240)||(28082228-28082343)
chr4 (125-232)||(31824731-31824838)
chr4 (125-240)||(22436901-22437016)
chr4 (125-240)||(34153388-34153503)
chr4 (125-240)||(43889601-43889716)
chr4 (125-240)||(242518-242633)
chr4 (125-240)||(33163646-33163761)
chr4 (125-240)||(47657457-47657572)
chr4 (125-240)||(51027869-51027984)
chr4 (125-240)||(51428294-51428409)
chr4 (125-239)||(14330796-14330910)
chr4 (125-238)||(25762590-25762703)
chr4 (122-238)||(957554-957670)
chr4 (125-240)||(21017279-21017394)
chr4 (125-240)||(26591787-26591902)
chr4 (125-240)||(37866396-37866511)
chr4 (125-240)||(40353875-40353990)
chr4 (125-240)||(46816625-46816740)
chr4 (125-240)||(49063969-49064084)
chr4 (125-240)||(49792038-49792153)
chr4 (47-123)||(17917229-17917305)
chr4 (125-240)||(44560282-44560397)
chr4 (125-239)||(2773000-2773114)
chr4 (125-235)||(20778971-20779081)
chr4 (125-211)||(21711549-21711635)
chr4 (125-235)||(55796738-55796848)
chr4 (50-123)||(17497566-17497639)
chr4 (130-238)||(42886255-42886366)
chr4 (125-237)||(11288288-11288400)
chr4 (125-237)||(20901770-20901882)
chr4 (125-240)||(1226150-1226264)
chr4 (125-240)||(21169441-21169556)
chr4 (130-237)||(32938009-32938116)
chr4 (130-237)||(36776626-36776733)
chr4 (47-122)||(46516376-46516451)
chr4 (130-237)||(49423865-49423972)
chr4 (125-239)||(49817746-49817860)
chr4 (125-238)||(3393296-3393409)
chr4 (125-238)||(9489671-9489784)
chr4 (125-238)||(10312264-10312377)
chr4 (50-123)||(32717336-32717409)
chr4 (125-237)||(6282425-6282537)
chr4 (125-240)||(6177417-6177532)
chr4 (125-240)||(34529898-34530013)
chr4 (125-240)||(41794664-41794779)
chr4 (125-240)||(56138900-56139015)
chr4 (47-123)||(1591876-1591952)
chr4 (125-237)||(39588922-39589034)
chr4 (125-237)||(45939518-45939630)
chr4 (125-240)||(49094735-49094850)
chr4 (125-183)||(27759374-27759432)
chr4 (125-210)||(1042769-1042854)
chr4 (125-238)||(17211258-17211371)
chr4 (125-238)||(18412587-18412700)
chr4 (130-238)||(24606744-24606852)
chr4 (47-127)||(4618595-4618674)
chr4 (141-240)||(4785540-4785639)
chr4 (1-47)||(22751861-22751907)
chr4 (1-47)||(22763139-22763185)
chr4 (145-238)||(21412647-21412740)
chr4 (165-240)||(13850739-13850814)
chr4 (145-240)||(13866253-13866348)
chr4 (1-47)||(27789191-27789238)
chr4 (1-47)||(30953307-30953354)
chr4 (3-39)||(10755107-10755143)
chr4 (3-39)||(10968876-10968912)
[»] scaffold0589 (1 HSPs)
scaffold0589 (125-238)||(2261-2374)
[»] chr6 (26 HSPs)
chr6 (130-240)||(34803001-34803111)
chr6 (130-238)||(14115033-14115141)
chr6 (125-215)||(35058835-35058925)
chr6 (125-240)||(801160-801274)
chr6 (125-240)||(12396770-12396885)
chr6 (125-240)||(13402527-13402642)
chr6 (125-240)||(29066547-29066662)
chr6 (125-240)||(29075560-29075675)
chr6 (125-240)||(32027728-32027843)
chr6 (125-240)||(32037787-32037902)
chr6 (141-237)||(22305793-22305889)
chr6 (125-240)||(27640174-27640289)
chr6 (125-240)||(29110531-29110647)
chr6 (125-240)||(6205478-6205593)
chr6 (125-240)||(29108134-29108249)
chr6 (125-239)||(11692446-11692560)
chr6 (59-127)||(22865087-22865155)
chr6 (125-175)||(30257679-30257729)
chr6 (1-38)||(19573615-19573652)
chr6 (1-37)||(19011614-19011650)
chr6 (3-38)||(8668221-8668256)
chr6 (3-38)||(16688698-16688733)
chr6 (1-39)||(20090425-20090463)
chr6 (1-38)||(19577235-19577272)
chr6 (1-38)||(23606970-23607007)
chr6 (47-123)||(26683967-26684044)
[»] scaffold0325 (1 HSPs)
scaffold0325 (47-123)||(4879-4955)
[»] scaffold0176 (1 HSPs)
scaffold0176 (135-239)||(1783-1887)
[»] scaffold0192 (1 HSPs)
scaffold0192 (125-232)||(18017-18123)
[»] scaffold0181 (1 HSPs)
scaffold0181 (125-238)||(24899-25012)
[»] scaffold0004 (1 HSPs)
scaffold0004 (125-240)||(63968-64082)
[»] scaffold0297 (1 HSPs)
scaffold0297 (47-123)||(1964-2041)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-49)||(10396-10445)
[»] scaffold0878 (1 HSPs)
scaffold0878 (1-37)||(4385-4421)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-37)||(7694-7730)
[»] scaffold0202 (2 HSPs)
scaffold0202 (3-39)||(13812-13848)
scaffold0202 (3-38)||(10326-10361)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-48)||(25703-25751)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-37)||(194737-194773)
[»] scaffold0716 (1 HSPs)
scaffold0716 (1-47)||(2269-2316)
[»] scaffold0130 (1 HSPs)
scaffold0130 (3-38)||(14935-14970)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-47)||(37013-37060)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-39)||(12959-12997)
[»] scaffold0208 (1 HSPs)
scaffold0208 (3-37)||(1466-1500)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-38)||(78818-78855)
[»] scaffold0071 (1 HSPs)
scaffold0071 (1-33)||(44338-44370)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-37)||(146820-146856)
scaffold0023 (1-37)||(150027-150063)
[»] scaffold0013 (2 HSPs)
scaffold0013 (1-48)||(133404-133452)
scaffold0013 (1-48)||(137933-137981)


Alignment Details
Target: chr3 (Bit Score: 93; Significance: 2e-45; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 39417048 - 39417160
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  39417048 aaaacatgctcatcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaactaattccac 39417147  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  39417148 cctccttgtgtct 39417160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 48087652 - 48087764
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  48087652 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaggtgaatgatactctcccctcgtcgagcgttggacgtttataccgaactaattccac 48087751  T
Q  225 cctccttgtgtct 237  Q
    | |||||||||||    
T  48087752 catccttgtgtct 48087764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 25576691 - 25576806
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  |||||||    
T  25576691 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgataatctcccctcgtcgagcgttggatgtttataccgaacgtattccac 25576790  T
Q  225 cctccttgtgtctctg 240  Q
    |||||||| |||||||    
T  25576791 cctccttgcgtctctg 25576806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 46414434 - 46414549
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||   ||||||    
T  46414434 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctccactcgtcgagcgttggatgtttataccgaacgtgttccac 46414533  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  46414534 cctccttgtgtctctg 46414549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 41578025 - 41577918
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  |||||||    
T  41578025 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtattccac 41577926  T
Q  225 cctccttg 232  Q
    ||||||||    
T  41577925 cctccttg 41577918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 47065806 - 47065691
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||| ||||  |||||||    
T  47065806 aaaacatgctcgtcacattttcctcgttctttaactccacccaagtgaatgatactctcccctcgtcaagcgttggacgtttatactgaacgtattccac 47065707  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  47065706 cctccttgtgtctctg 47065691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 51013378 - 51013493
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||| |||||||||||||   ||||||    
T  51013378 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgttgagcgttggacgtttataccgaacgtgttccac 51013477  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  51013478 cctccttgtgtctctg 51013493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 13895970 - 13896084
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||| || |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  13895970 aaaacatgctcgtcacgttttcgtcgctcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 13896069  T
Q  225 cctccttgtgtctct 239  Q
    |||||||||||||||    
T  13896070 cctccttgtgtctct 13896084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 44835587 - 44835701
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||||| |||||  |||||||    
T  44835587 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaaatgaatgatactctcccctcgtcgaacgttgaatgtttatatcgaacgtattccac 44835686  T
Q  225 cctccttgtgtctct 239  Q
    |||||||| ||||||    
T  44835687 cctccttgcgtctct 44835701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 44927582 - 44927469
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||   ||||||    
T  44927582 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 44927483  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  44927482 cctccttgtgtctc 44927469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 8633468 - 8633572
Alignment:
Q  134 tcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgt 233  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||  ||||||||||||||||    
T  8633468 tcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagcgttggatgtttataccaaacgtattccaccctccttgt 8633567  T
Q  234 gtctc 238  Q
    |||||    
T  8633568 gtctc 8633572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 34647372 - 34647480
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcc 229  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||   |||||||||||    
T  34647372 atgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttatactgaacgtgttccaccctcc 34647471  T
Q  230 ttgtgtctc 238  Q
    |||||||||    
T  34647472 ttgtgtctc 34647480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 45100565 - 45100677
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||   ||||||    
T  45100565 aaaacatgctcgtcacatttttgtcgttctttaactccacccaagtgaatgatactctcccttcgtcgagcgttggacgtttataccgaacgtgttccac 45100664  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  45100665 cctccttgtgtct 45100677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 30192641 - 30192542
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctctg 240  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||||||||||||||||||    
T  30192641 gttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctg 30192542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 41804021 - 41803906
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||   ||||||    
T  41804021 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttgaacgtttataccgaacgtgttccac 41803922  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||| ||||||||    
T  41803921 cctccttttgtctctg 41803906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 42382390 - 42382275
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||||  | |||||    
T  42382390 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagtgttggacgtttatactgaacgtagtccac 42382291  T
Q  225 cctccttgtgtctctg 240  Q
    |||||||  |||||||    
T  42382290 cctccttacgtctctg 42382275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 42383170 - 42383055
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||||  | |||||    
T  42383170 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagtgttggaagtttatactgaacgtagtccac 42383071  T
Q  225 cctccttgtgtctctg 240  Q
    |||||||  |||||||    
T  42383070 cctccttacgtctctg 42383055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 53826796 - 53826911
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| |||  |||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||| |||||||||||||  |||||||    
T  53826796 aaaacatgctcatcacattttcgtcgttctttaactctacccaagtgaatgatactctcccctcgtcgagcattggacgtttataccgaacgtattccac 53826895  T
Q  225 cctccttgtgtctctg 240  Q
    |||||||| |||||||    
T  53826896 cctccttgcgtctctg 53826911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 49273513 - 49273404
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcc 229  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||    |||||||||||    
T  49273513 atgctcgtcacgttttcgtcgttcattaattccacccaagtgaatgatactctgccctcgtcgagcgttggacgtttataccgaatgtgttccaccctcc 49273414  T
Q  230 ttgtgtctct 239  Q
    ||||||||||    
T  49273413 ttgtgtctct 49273404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 34472176 - 34472288
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||    ||||||    
T  34472176 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtagagcgttggacgtttataccgaatgtgttccac 34472275  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  34472276 cctccttgtgtct 34472288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 51015396 - 51015284
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||||| |||||||||||||   ||||||    
T  51015396 aaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatacactcccctcgtcgagcgttggacgtttataccgaacgtgttccac 51015297  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  51015296 cctccttgtgtct 51015284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 42950120 - 42950235
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||||||||||  ||||||||||||  |||||||    
T  42950120 aaaacatgctcgtcacgttttcgtcattctttaactccatccaagtgaatgatactcttccctcgtcgagcgttggacatttataccgaacgtattccac 42950219  T
Q  225 cctccttgtgtctctg 240  Q
    ||| |||| |||||||    
T  42950220 ccttcttgcgtctctg 42950235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 43570029 - 43569914
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||  ||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  43570029 aaaacatgctcgtcacgttttcgtcgttcgttagttccacccaagtaaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 43569930  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||| ||||||||    
T  43569929 cctccttctgtctctg 43569914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 10053371 - 10053485
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||   |||||||    
T  10053371 aaaacatgctcatcacgttttcgtcgttcgttaattccacccaattgaatgatactctcccctcgtcgagcgttggacatttataccgaatgtattccac 10053470  T
Q  225 cctccttgtgtctct 239  Q
    |||||||||||||||    
T  10053471 cctccttgtgtctct 10053485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 2268594 - 2268706
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||| ||||| ||||||||||||| |||| |||| |||||||||||||||||||||||| |||||||||||| ||||||||| ||||  ||||||    
T  2268594 aaaacatgcccgtcacgttttcgtcgttcgttaattccatccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacttgttccac 2268693  T
Q  225 cctccttgtgtct 237  Q
    | |||||||||||    
T  2268694 catccttgtgtct 2268706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 2283998 - 2284074
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  2283998 acgctcctaccaaacgatgattgtatctccccaaattggtttgccaacatctcatctattttatgccaacaagtacc 2284074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 32426947 - 32426871
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  32426947 acgctcctaccaaacgatgattgtatctccccaaattggtttgccaacatctcatctattttatgccaacaagtacc 32426871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 136 - 240
Target Start/End: Original strand, 47760002 - 47760106
Alignment:
Q  136 gtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgt 235  Q
    |||| ||||||||||||| |||| |||||||| |||||||||||||||||||| |||||||||||| |||||||| ||||   |||||||||||||||||    
T  47760002 gtcacgttttcgtcgttcgttaattccacccaggtgaatgatactctcccctcgtcgagcgttggacgtttatacggaacgtgttccaccctccttgtgt 47760101  T
Q  236 ctctg 240  Q
    |||||    
T  47760102 ctctg 47760106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 2428606 - 2428491
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||||||||||| | ||||||| |||||||||||| |||||||||||||   ||||||    
T  2428606 aaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattatcccctcgtcgagcgttggacgtttataccgaacgtgttccac 2428507  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||| ||||||||    
T  2428506 cctccttctgtctctg 2428491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 2646976 - 2647091
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| || |||||||||||| ||||||||| |||   ||||||    
T  2646976 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccatcgtcgagcgttggacgtttataccaaacgtgttccac 2647075  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  2647076 catccttgtgtctctg 2647091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 3495129 - 3495244
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| | |||   ||||||    
T  3495129 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttatatcaaacgtgttccac 3495228  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  3495229 catccttgtgtctctg 3495244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 4004187 - 4004302
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||| ||||||| |||| |||||||| |||||||||||||||||||| |||||||||| ||||||||||| |||   ||||||    
T  4004187 aaaacatgctcgtcacgtttttgtcgttcgttaattccacccacgtgaatgatactctcccctcgtcgagcgttgaatgtttataccaaacgtgttccac 4004286  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  4004287 catccttgtgtctctg 4004302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 14631564 - 14631449
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||| |||| |||| |||||||||||||||||||||||   ||| |||||||||||| |||||||||||||   ||||||    
T  14631564 aaaacatgctcgtcacgttttcgttgttcgttaattccacccaagtgaatgatactctttactcgtcgagcgttggacgtttataccgaacgtgttccac 14631465  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  14631464 cctccttgtgtctctg 14631449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 43477176 - 43477061
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||    ||||||    
T  43477176 aaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttataccaaaggtgttccac 43477077  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  43477076 cctccttgtgtctctg 43477061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 49610608 - 49610493
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||  |||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    ||||||    
T  49610608 aaaacatgctcgtcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttatatcgaaggtgttccac 49610509  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  49610508 cctccttgtgtctctg 49610493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 36135126 - 36135013
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||| |||||||||||| ||||||||| |||   ||||||    
T  36135126 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatact-tcccctcgtcgagcgttggacgtttataccaaacgtgttccac 36135028  T
Q  225 cctccttgtgtctct 239  Q
    | |||||||||||||    
T  36135027 catccttgtgtctct 36135013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 6754323 - 6754210
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| | ||||||| ||||||||| |||||||||||| |||||||||||||  |||||||    
T  6754323 aaaacatgatcgtcacgttttcgtcgttcgttaattccacccaacttaatgatattctcccctcgtcgagcgttggacgtttataccgaacgtattccac 6754224  T
Q  225 cctccttgtgtctc 238  Q
    |||| |||||||||    
T  6754223 cctctttgtgtctc 6754210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 4119736 - 4119812
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  4119736 acgctcctaccaaacgatgattatatctccccaaattggtttgccaacatctcatctattttatgccaacaagtacc 4119812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 33449255 - 33449351
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtct 237  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| || ||||||| |||||  ||| ||||||||||||||||    
T  33449255 gttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgtttgacgtttatatcgaacgtatttcaccctccttgtgtct 33449351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 37281571 - 37281459
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||| |||||||||||||||||||| || ||||| ||||| |||||| |||||||||||||   |||||     
T  37281571 aaaacatgctcgtcacgttttcgtcgttctttaattccacccaagtgaatgataccctaccctcgtcgagtgttggacgtttataccgaacgtgttccat 37281472  T
Q  225 cctccttgtgtct 237  Q
    | |||||||||||    
T  37281471 catccttgtgtct 37281459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 40467153 - 40467225
Alignment:
Q  50 ctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtac 122  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  40467153 ctcctaccaaacgatgattgtatcttcccaaattggtttgccaacatctcatctattttttgccaacaagtac 40467225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 51547475 - 51547551
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||    
T  51547475 acgctcctaccaaacgatgattgtatctccccgaattggtttgccaacatctcatctattttatgccaacaagtacc 51547551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 55206984 - 55207099
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||||||||||| |||| |||||||||||||||||||||||| |||| |||||| ||||| |||||||||||||   || |||    
T  55206984 aaaacatgctcgtcacattttcgtcgttcgttaattccacccaagtgaatgatactctcacctcgtcgagcattggacgtttataccgaacgtgtttcac 55207083  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||| ||||||||    
T  55207084 cctccttctgtctctg 55207099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 19453334 - 19453444
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcc 229  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||  |||||| ||||| ||||||| |||||   |||||||||||    
T  19453334 atgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctccccttgtcgagcattggacgtttatatcgaacgtgttccaccctcc 19453433  T
Q  230 ttgtgtctctg 240  Q
    || | ||||||    
T  19453434 ttctatctctg 19453444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 24702382 - 24702483
Alignment:
Q  135 cgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtg 234  Q
    ||||| ||||||||||||| | || ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||   ||||||||||||||||    
T  24702382 cgtcacgttttcgtcgttcgt-aattccacccaagtgaatgatattctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtg 24702480  T
Q  235 tct 237  Q
    |||    
T  24702481 tct 24702483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 7246213 - 7246124
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaa 214  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||||    
T  7246213 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtcaatgatattctcccctcgtcgagcgttggacgtttataccgaa 7246124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 34693390 - 34693503
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||  |||| ||||||||||||||||||||||  ||||| |||||||||||| |||||||| |||    ||||||    
T  34693390 aaaacatgctcgtcacgttttcgtcgtttgttaattccacccaagtgaatgatactcaaccctcgtcgagcgttggacgtttatactgaaggtgttccac 34693489  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  34693490 cctccttgtgtctc 34693503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 136 - 236
Target Start/End: Original strand, 6464456 - 6464556
Alignment:
Q  136 gtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgt 235  Q
    |||| ||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||||||||| ||||||||| |||  ||||||||||| ||||||    
T  6464456 gtcacgttttcgtcgttcattaattccacccaactgaatgatattctcccctcgtcgagcgttggacgtttataccaaacgtattccaccctctttgtgt 6464555  T
Q  236 c 236  Q
    |    
T  6464556 c 6464556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 42323489 - 42323568
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgt 204  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| || ||||||||||||    
T  42323489 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcaagcgttggatgt 42323568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 46403122 - 46403007
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  46403122 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 46403023  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  46403022 catccttgtgtctctg 46403007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 49140154 - 49140269
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  49140154 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 49140253  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  49140254 catccttgtgtctctg 49140269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 51695706 - 51695821
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| || |||||||||  |||| ||||||||||||||||| ||| | ||||| |||||||||||| ||||||||||||    ||||||    
T  51695706 aaaacatgctcgtcacgtattcgtcgtttgttaattccacccaagtgaatgaaacttttccctcgtcgagcgttggacgtttataccgaaggtgttccac 51695805  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  51695806 cctccttgtgtctctg 51695821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 52569509 - 52569623
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||||||||||| |||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||||    ||||||    
T  52569509 aaaacatgctcgtcac-ttttcgtcgttcgttaattccacccaagcgaatgatactctcccctcgtcgagcgttggacgtttataccgaatgtgttccac 52569607  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||| ||||||||    
T  52569608 catccttttgtctctg 52569623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 54390561 - 54390446
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  54390561 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 54390462  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  54390461 catccttgtgtctctg 54390446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 36721495 - 36721601
Alignment:
Q  131 tgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcct 230  Q
    ||||||||| ||||||||||||| || | ||||  ||||||||||||||||||| ||| ||||||||||||  ||||||||||||   ||||||||||||    
T  36721495 tgctcgtcacgttttcgtcgttcgtttattccaatcaagtgaatgatactctcctctcgtcgagcgttggacatttataccgaacgtgttccaccctcct 36721594  T
Q  231 tgtgtct 237  Q
    |||||||    
T  36721595 tgtgtct 36721601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 49218836 - 49218950
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||| ||||  |||| ||||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||    ||||||    
T  49218836 aaaacatgttcgtcacgttttcgccgtttgttaattccacccaagtgaatgatattctcccctcgtcgagcgttggacgtttataccaaaggtgttccac 49218935  T
Q  225 cctccttgtgtctct 239  Q
    |||||||||||||||    
T  49218936 cctccttgtgtctct 49218950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 33940960 - 33940884
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    |||||||||||||| ||||||||||| ||| |||||||||||| ||||||||| |||||||| ||||||||||||||    
T  33940960 acgctcctaccaaatgatgattgtatttccacaaattggtttgccaacatctcatctattttatgccaacaagtacc 33940884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 27187067 - 27186952
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||||||||||||||||| |||| ||||||||| | ||||||| |||||||||  ||||| |||||  |||||||  |||  |||||||    
T  27187067 aaaacatgttcgtcatgttttcgtcgttcgttaattccacccaactaaatgatattctcccctctacgagcattggacatttatactaaacgtattccac 27186968  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  27186967 cctccttgtgtctctg 27186952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 34049846 - 34049731
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||| | ||||||||| ||    ||||||    
T  34049846 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttgaacgtttataccaaatgtgttccac 34049747  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  34049746 catccttgtgtctctg 34049731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 7954323 - 7954209
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccc-tcatcgagcgttggatgtttataccgaactaattcca 223  Q
    |||| ||||||||||  |||||||||||  |||| ||||||||| | |||||||| |||||| |||||||| |||||| |||||| ||||||  ||||||    
T  7954323 aaaacatgctcgtcacattttcgtcgtttgttaattccacccaactaaatgataccctccccctcatcgagtgttggacgtttatgccgaacgtattcca 7954224  T
Q  224 ccctccttgtgtctc 238  Q
    |||||||||||||||    
T  7954223 ccctccttgtgtctc 7954209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 10286209 - 10286269
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  10286209 acgctcctaccaaacgatgattgtatctccccaaattggtttgccaacatgtcatctattt 10286269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 15637118 - 15637031
Alignment:
Q  150 gttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtct 237  Q
    |||| |||| ||||||||| ||||||||| |||||| || ||||| |||||| |||||||||||||  ||||||||||||||||||||    
T  15637118 gttcattaattccacccaactgaatgatattctcccatcgtcgagtgttggacgtttataccgaacgtattccaccctccttgtgtct 15637031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 9555706 - 9555781
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtac 122  Q
    ||||||||||| |||||||| |||||||||||||| ||| ||| ||||||||| |||||||||| |||| ||||||    
T  9555706 acgctcctacctaacgatgactgtatctccccaaactggattgccaacatctcatctattttttcccaataagtac 9555781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 14265507 - 14265412
Alignment:
Q  145 tcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctctg 240  Q
    ||||||||| |||| | || |||| ||||||||| || ||| || |||| |||||||||||||||||||||  |||||||| ||||||||||||||    
T  14265507 tcgtcgttccttaatttcatccaactgaatgatattcacccatcgtcgaacgttggatgtttataccgaacgtattccaccttccttgtgtctctg 14265412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 4511242 - 4511168
Alignment:
Q  49 gctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    |||||||||||||||||||||||||| |||||  ||| ||  ||||||||| |||||||||| ||||||||||||    
T  4511242 gctcctaccaaacgatgattgtatcttcccaagctggattaccaacatctcatctattttttcccaacaagtacc 4511168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15926710 - 15926664
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttttcaagtaca 47  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  15926710 atacgattcttaaccctagaatccttattgtacttttttcaagtaca 15926664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 20376002 - 20376090
Alignment:
Q  145 tcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgt 233  Q
    |||||||||||||| ||||||||| ||||||||| |||||| || |||||| || || |||||||||||||  |||||| | |||||||    
T  20376002 tcgtcgttctttaattccacccaactgaatgatattctcccatcgtcgagcattagacgtttataccgaacatattccatcttccttgt 20376090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 50458791 - 50458906
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |  | ||||||||| | || |||||||||||||| ||||||||||||   ||||| ||| |   | ||||    
T  50458791 aaaacatgctcgtcaagttttcgtcgttcgtagattccacccaattaaacgatactctcccctcgtcgagcgttggacacttatatcgaccgtgtcccac 50458890  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  50458891 cctccttgtgtctctg 50458906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 774454 - 774551
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctc 238  Q
    |||||| |||||| |||| |||| |||| ||||||||| |||||| || |||||||||||| ||||||| | |||  ||||||| ||||| |||||||    
T  774454 gttttcatcgttcgttaattccatccaactgaatgatattctcccgtcgtcgagcgttggacgtttatagcaaacacattccactctcctcgtgtctc 774551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 50997507 - 50997453
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatac 179  Q
    |||| |||||||||| ||||||||||||| |||| ||||| ||||||||||||||    
T  50997507 aaaacatgctcgtcacgttttcgtcgttcgttaattccactcaagtgaatgatac 50997453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 16082811 - 16082848
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||||| |||||||||||||||||||||||||||||    
T  16082811 atacgattcttaaccctagaatccttattgtacttttt 16082848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 46346737 - 46346794
Alignment:
Q  182 tcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctct 239  Q
    |||| ||||||||||||||| |||||||| ||||   |||||||||||||||||||||    
T  46346737 tcccttcatcgagcgttggacgtttatacggaacgtgttccaccctccttgtgtctct 46346794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 94532 - 94496
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  94532 atacgattcttaaccctagaatccttattgtactttt 94496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 103394 - 103358
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  103394 atacgattcttaaccctagaatccttattgtactttt 103358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 11378909 - 11378957
Alignment:
Q  190 tcgagcgttggatgtttataccgaactaattccaccctccttgtgtctc 238  Q
    |||||||||||| |||||||||||||   ||||||||||||||||||||    
T  11378909 tcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctc 11378957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 8854103 - 8854068
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  8854103 acgattcttaaccctagaatccttattgtacttttt 8854068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12206687 - 12206640
Alignment:
Q  1 atacgatttttaaccctagaatcc-ttattgtacttttttcaagtaca 47  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  12206687 atacgattcttaaccctagaatcccttattgtactttttgcaagtaca 12206640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 26900585 - 26900550
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  26900585 acgattcttaaccctagaatccttattgtacttttt 26900550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 8856948 - 8856915
Alignment:
Q  5 gatttttaaccctagaatccttattgtacttttt 38  Q
    |||| |||||||||||||||||||||||||||||    
T  8856948 gattcttaaccctagaatccttattgtacttttt 8856915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 16091987 - 16092024
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  16091987 atacgattcttaaccctagaattcttattgtacttttt 16092024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54110957 - 54111002
Alignment:
Q  1 atacgatttttaaccctagaat-ccttattgtacttttttcaagta 45  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||||    
T  54110957 atacgattcttaaccctagaatcccttattgtactttttgcaagta 54111002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 15417868 - 15417900
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtac 33  Q
    |||||||| ||||||||||||||||||||||||    
T  15417868 atacgattcttaaccctagaatccttattgtac 15417900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 40009632 - 40009518
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  |||||||    
T  40009632 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtattccac 40009533  T
Q  225 cctccttgtgtctct 239  Q
    |||||||| ||||||    
T  40009532 cctccttgcgtctct 40009518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 18308364 - 18308249
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  18308364 aaaacatgctcgtcatgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 18308265  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  18308264 cctccttgtgtctctg 18308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 8538058 - 8537943
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||   ||||||    
T  8538058 aaaacatgctcgtcatgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttgaacgtttataccgaacgtgttccac 8537959  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  8537958 catccttgtgtctctg 8537943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 19400467 - 19400352
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||  |||||||    
T  19400467 aaaacatgctcgtcacattttcgtcgttcgttaattccacccaagtgaatgacactctcccctcatcgagcgttggacgtttataccgaacgtattccac 19400368  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  19400367 catccttgtgtctctg 19400352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 36350413 - 36350523
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcc 229  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||   |||||||||||    
T  36350413 atgctcgtcacgttttcgtcgttcattaattccacccaagtgaatgatactctcccctcgtcgagcgttgaacgtttataccgaacgtgttccaccctcc 36350512  T
Q  230 ttgtgtctctg 240  Q
    |||||||||||    
T  36350513 ttgtgtctctg 36350523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 1400405 - 1400518
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  1400405 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 1400504  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  1400505 cctccttgtgtctc 1400518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 3601446 - 3601330
Alignment:
Q  124 taaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattcca 223  Q
    ||||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    ||| |    
T  3601446 taaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaatatgttcta 3601347  T
Q  224 ccctccttgtgtctctg 240  Q
    |||||||||||||||||    
T  3601346 ccctccttgtgtctctg 3601330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 7332 - 7447
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||    
T  7332 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccac 7431  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  7432 catccttgtgtctctg 7447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 541738 - 541853
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||  ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    ||||||    
T  541738 aaaacatgctcgtcccgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaaggtgttccac 541837  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  541838 cctccttgtgtctctg 541853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 1971469 - 1971356
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||    
T  1971469 aaaacatgctcgtcacgttttcgtcgttcgttaattccaccgaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccac 1971370  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  1971369 cctccttgtgtctc 1971356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 3458932 - 3458828
Alignment:
Q  133 ctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttg 232  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||  ||||||||||||  |||||||||||||||    
T  3458932 ctcgtcacgttttcgtcgttctttaactcaacccaagtgaatgatactctcccctcgtcaagcgttggacatttataccgaacgtattccaccctccttg 3458833  T
Q  233 tgtct 237  Q
     ||||    
T  3458832 cgtct 3458828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 4724177 - 4724292
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    ||||||    
T  4724177 aaaacatgctcgtcacgtttttgtcgttcgttaattccacccaagtgaatgatactctcccctcatcgagcgttggacgtttataccgaatgtgttccac 4724276  T
Q  225 cctccttgtgtctctg 240  Q
      ||||||||||||||    
T  4724277 tttccttgtgtctctg 4724292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 11346813 - 11346698
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| | ||||||||||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||    
T  11346813 aaaacatgctcgtcacgttttcgtcgttcattaatttcacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccac 11346714  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  11346713 catccttgtgtctctg 11346698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 3169708 - 3169593
Alignment:
Q  124 taaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattcca 223  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||| || |||||||||||||   |||||    
T  3169708 taaaatatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactct-ccctcgtcgagcgttagacgtttataccgaacgtgttcca 3169610  T
Q  224 ccctccttgtgtctctg 240  Q
    ||||| || ||||||||    
T  3169609 ccctctttatgtctctg 3169593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 8576244 - 8576359
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| |||||| |||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||    
T  8576244 aaaacatggtcgtcacgttttcttcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccac 8576343  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  8576344 catccttgtgtctctg 8576359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 33370758 - 33370645
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||| | ||||||| ||||||||| |||||||||| | ||||||| |||||  |||||||    
T  33370758 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaactaaatgatattctcccctcgtcgagcgttgaacgtttatatcgaacgtattccac 33370659  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  33370658 cctccttgtgtctc 33370645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 42344603 - 42344534
Alignment:
Q  50 ctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaag 119  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  42344603 ctcctaccaaacgatgattgtatctccccaaattggtttgccaacatctcatctattttttgccaacaag 42344534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 11027865 - 11027769
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtct 237  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||| |||||||||||    
T  11027865 gttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtct 11027769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 35565375 - 35565261
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||| | |||||| |||| ||||||||||||||||||||||||||||| ||||||||| || |||||||||||||   ||||||    
T  35565375 aaaacatgctcgtcacgttt-catcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttagacgtttataccgaacgtgttccac 35565277  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||| ||||||||    
T  35565276 cctccttatgtctctg 35565261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 11820332 - 11820259
Alignment:
Q  50 ctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| |||||    
T  11820332 ctcctaccaaacgatgattgtatctccccaaattggtttgccaacatctcatatattttttgccaacatgtacc 11820259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 6553908 - 6553832
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||| || ||||||||||||||    
T  6553908 acgctcctaccaaacgatgattgtatctccccaaattggtttgccaacatctcatttatgttatgccaacaagtacc 6553832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 30709702 - 30709594
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||    
T  30709702 aaaacatggtcgtcacgttttcgtcattcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccac 30709603  T
Q  225 cctccttgt 233  Q
    | |||||||    
T  30709602 catccttgt 30709594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 38854246 - 38854150
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtct 237  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||| |||||||||||    
T  38854246 gttttcgtcgttcgttaattccacccaattgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtct 38854150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 19036777 - 19036892
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  19036777 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 19036876  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  19036877 catccttgtgtctctg 19036892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 28881095 - 28880980
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||||||| |||| |||| ||    ||||||    
T  28881095 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagcgttggacgtttgtaccaaatgttttccac 28880996  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  28880995 catccttgtgtctctg 28880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 17366856 - 17366950
Alignment:
Q  142 ttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtct 237  Q
    |||||||||||| |||| ||||||||| | ||||||| ||| ||||||||||| |||||| ||||||| |||||| ||||||||||||||||||||    
T  17366856 ttttcgtcgttcgttaattccacccaactaaatgatattcttccctcatcgagggttggacgtttatatcgaact-attccaccctccttgtgtct 17366950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 27661480 - 27661595
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||| ||||||||||||||||| ||||||  |||| ||||||||  |||   ||||||    
T  27661480 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaagtaaatgatactctcccctcgtcgagcaatggaagtttatactaaacgtgttccac 27661579  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  27661580 catccttgtgtctctg 27661595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 6793489 - 6793604
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||||||||||| |||| ||||| |||||||||||||||| | |||| ||||||||| |  ||||||||||||    |||||     
T  6793489 aaaacatgctcgtcacattttcgtcgttcgttaattccactcaagtgaatgatactcactcctcgtcgagcgttaggcgtttataccgaatgtgttccat 6793588  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  6793589 cctccttgtgtctctg 6793604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 215
Target Start/End: Original strand, 35927540 - 35927630
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaac 215  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| | ||||||||||| ||||| |||||| ||||| ||||||| |||||    
T  35927540 aaaacatgttcgtcacgttttcgtcgttcgttaattccacccaactaaatgatactcttccctcgtcgagcattggacgtttataacgaac 35927630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 1693455 - 1693382
Alignment:
Q  155 ttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctc 228  Q
    |||| ||||||||||||| ||||||||||| ||| |||||||||||| |||||||||||||   ||||||||||    
T  1693455 ttaattccacccaagtgagtgatactctcctctcgtcgagcgttggacgtttataccgaacgtgttccaccctc 1693382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 12805617 - 12805524
Alignment:
Q  145 tcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctc 238  Q
    ||||||||| |||| |||||| || ||||||||| | || | |||| |||||||||| |||||||||||||  |||||||||| ||||||||||    
T  12805617 tcgtcgttcgttaattccacctaactgaatgatattatctcatcattgagcgttggacgtttataccgaacgtattccacccttcttgtgtctc 12805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 2599288 - 2599210
Alignment:
Q  160 tccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctc 238  Q
    ||||||||| ||||||||| |||| | || ||||  |||||| |||||||||||||  |||||||||||||||||||||    
T  2599288 tccacccaactgaatgatattctctcatcgtcgaatgttggacgtttataccgaacgtattccaccctccttgtgtctc 2599210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 12742804 - 12742706
Alignment:
Q  140 tgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctc 238  Q
    |||| ||||||||| |||| |||||| || ||||||||| | || | || | |||||||||| |||||||||||||  |||||||||| ||||||||||    
T  12742804 tgttatcgtcgttcgttaattccacctaactgaatgatattatctcatcgttgagcgttggacgtttataccgaacgtattccacccttcttgtgtctc 12742706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 7082331 - 7082281
Alignment:
Q  190 tcgagcgttggatgtttataccgaactaattccaccctccttgtgtctctg 240  Q
    |||||||||||| |||||||||||||   ||||||||||||||||||||||    
T  7082331 tcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctg 7082281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27073828 - 27073876
Alignment:
Q  1 atacgatttttaaccctagaatcc-ttattgtacttttttcaagtacac 48  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  27073828 atacgatttttaaccttagaatcccttattgtactttttgcaagtacac 27073876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8460307 - 8460354
Alignment:
Q  1 atacgatttttaaccctagaat-ccttattgtacttttttcaagtaca 47  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  8460307 atacgattcttaaccctagaataccttattgtactttttgcaagtaca 8460354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20675404 - 20675357
Alignment:
Q  1 atacgatttttaaccctagaatcc-ttattgtacttttttcaagtaca 47  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  20675404 atacgattcttaaccctagaatcccttattgtactttttgcaagtaca 20675357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20675734 - 20675687
Alignment:
Q  1 atacgatttttaaccctagaatcc-ttattgtacttttttcaagtaca 47  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  20675734 atacgattcttaaccctagaatcccttattgtactttttgcaagtaca 20675687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20671181 - 20671133
Alignment:
Q  1 atacgatttttaaccctagaatcc-ttattgtacttttttcaagtacac 48  Q
    |||||||| |||||| |||||||| |||||||||||||| |||||||||    
T  20671181 atacgattcttaaccttagaatccattattgtactttttgcaagtacac 20671133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 48568505 - 48568617
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||| || |||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  48568505 aaaacatgctcgtcacgttttcatcattctttaactccacccaagtgaatgatattctcccctcgtcgagcgttggacgtttataccgaactaattccac 48568604  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  48568605 cctccttgtgtct 48568617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 18170130 - 18170015
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||   ||||||    
T  18170130 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttgaacgtttataccgaacgtgttccac 18170031  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  18170030 cctccttgtgtctctg 18170015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 24270461 - 24270579
Alignment:
Q  122 cctaaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattc 221  Q
    ||||||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||   |||    
T  24270461 cctaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcatcgagtgttggacgtttataccgaacgtgttc 24270560  T
Q  222 caccctccttgtgtctctg 240  Q
    |||||||||||||||||||    
T  24270561 caccctccttgtgtctctg 24270579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 41874985 - 41875097
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| ||||||||||||||||||    
T  41874985 aaaacatgctcgtcacattttcgtcgttatttaactccacccaagtgaatgatactctcccctcttcgagcattggacgttgataccgaactaattccac 41875084  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  41875085 cctccttgtgtct 41875097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 14173859 - 14173974
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||   ||||||    
T  14173859 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattctcccctcatcgagcgttggacgtttataccgaacgtgttccac 14173958  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  14173959 cctccttgtgtctctg 14173974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 42571877 - 42571992
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||   ||||||    
T  42571877 aaaacatgctcttcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcattggacgtttataccgaacgtgttccac 42571976  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  42571977 cctccttgtgtctctg 42571992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 47488138 - 47488245
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||  |||||||    
T  47488138 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatattctcccctcgtcgagcgttggacgtttataccgaacgtattccac 47488237  T
Q  225 cctccttg 232  Q
    ||||||||    
T  47488238 cctccttg 47488245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 6435871 - 6435762
Alignment:
Q  131 tgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcct 230  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||||||||    
T  6435871 tgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgttttccaccctcct 6435772  T
Q  231 tgtgtctctg 240  Q
    ||||||||||    
T  6435771 tgtgtctctg 6435762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 35576444 - 35576331
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||   ||||||    
T  35576444 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattctcccctcatcgagcgttggacgtttataccgaacgtgttccac 35576345  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  35576344 cctccttgtgtctc 35576331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 48215303 - 48215191
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    ||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  48215303 aaaatatgctcgtcatgttttcgtcgttcgttaattccactcaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 48215204  T
Q  225 cctccttgtgtct 237  Q
    | |||||||||||    
T  48215203 catccttgtgtct 48215191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 12791374 - 12791489
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  12791374 aaaaaatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 12791473  T
Q  225 cctccttgtgtctctg 240  Q
    ||| ||||||||||||    
T  12791474 cctacttgtgtctctg 12791489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 29436078 - 29435963
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| |||||||||||||||||||||||||| || |||||||||||| |||||||||||||   ||||||    
T  29436078 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccatcgtcgagcgttggacgtttataccgaacgtgttccac 29435979  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  29435978 cctccttgtgtctctg 29435963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 38046535 - 38046650
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  38046535 aaaacatgcttgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 38046634  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  38046635 cctccttgtgtctctg 38046650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 133 - 240
Target Start/End: Original strand, 27035427 - 27035534
Alignment:
Q  133 ctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttg 232  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||| || ||||| |||||||||||| |||||||||| ||  |||||||||||||||    
T  27035427 ctcgtcacgttttcgtcattctttaactccacccaagtgaatgatacccttccctcgtcgagcgttggacgtttataccggacgtattccaccctccttg 27035526  T
Q  233 tgtctctg 240  Q
    ||||||||    
T  27035527 tgtctctg 27035534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 35587030 - 35587145
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||  |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  35587030 aaaacatgttcgtcacgttttcgtcgtttgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 35587129  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  35587130 cctccttgtgtctctg 35587145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 29762322 - 29762436
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||    ||||||    
T  29762322 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccac 29762421  T
Q  225 cctccttgtgtctct 239  Q
    |||||||||||||||    
T  29762422 cctccttgtgtctct 29762436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 18842544 - 18842431
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||| | ||||||| ||| |||||||||||||||||| |||||||||||||  |||||||    
T  18842544 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaactaaatgatattcttccctcatcgagcgttggacgtttataccgaacgtattccac 18842445  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  18842444 cctccttgtgtctc 18842431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 21484744 - 21484856
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| | || |||    
T  21484744 aaaacatgctcgtcacattttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagcgttggacgtttataccgaacaagtttcac 21484843  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  21484844 cctccttgtgtct 21484856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 27284159 - 27284083
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  27284159 acgctcctaccaaacgatgattgtatctccccaaattggtttgccaacatctcatctattttttgccaacaagtacc 27284083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 13973029 - 13972914
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||  ||||| |||||| |||||||| ||||  |||||||    
T  13973029 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctagtcgagtgttggacgtttatactgaacgtattccac 13972930  T
Q  225 cctccttgtgtctctg 240  Q
    |||||||| |||||||    
T  13972929 cctccttgcgtctctg 13972914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 39224298 - 39224413
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||| |||||||| |||||||||||||||||||| |||||||| | ||||||| || |||||||||||||   ||||||    
T  39224298 aaaacatgctcgtcacgttttcgtcattctttaattccacccaagtgaatgataccctcccctcgttgagcgttagacgtttataccgaacgtgttccac 39224397  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  39224398 cctccttgtgtctctg 39224413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 36909666 - 36909552
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| |||||||||||||||||| |||| ||||| |||||||||||| ||||| |||||||  |||||||    
T  36909666 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatgctcttccctcgtcgagcgttggacgtttacaccgaacgtattccac 36909567  T
Q  225 cctccttgtgtctct 239  Q
    ||||||| |||||||    
T  36909566 cctccttatgtctct 36909552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 13283810 - 13283697
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||||||||| |||||| |||| | ||||||| | ||||||||||||||||| |||||||||||| |||||||||||||  |||||||    
T  13283810 aaaacatgctcgtcatgttttcatcgttcgttaatttcacccaactaaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtattccac 13283711  T
Q  225 cctccttgtgtctc 238  Q
    |||||| |||||||    
T  13283710 cctcctcgtgtctc 13283697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 23342746 - 23342634
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| || |||||||||||||||||||||||||| |||||||||||| |||||||||||||   || |||    
T  23342746 aaaacatgctcgtcacgttttcgtcgttcgttaattcaacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgtttcac 23342647  T
Q  225 cctccttgtgtct 237  Q
    | |||||||||||    
T  23342646 cttccttgtgtct 23342634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 30309927 - 30310039
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| | ||||| |||||| |||||||||||||   ||||||    
T  30309927 aaaacatgctcgtcacgttttcgtcgttctttaattccacccaagtgaatgataccctccccccgtcgagtgttggacgtttataccgaacgtgttccac 30310026  T
Q  225 cctccttgtgtct 237  Q
    ||||||| |||||    
T  30310027 cctccttatgtct 30310039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 35185075 - 35184963
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| |||| | |||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  35185075 aaaacatgttcgtcacgttttcgtcgttcgttaattccatcaaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 35184976  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  35184975 cctccttgtgtct 35184963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 17686462 - 17686577
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| ||||||||| ||| |||| || |||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||| ||    
T  17686462 aaaacatgctcttcacgttttcgtcattcgttaattcaacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttctac 17686561  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  17686562 cctccttgtgtctctg 17686577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 44597790 - 44597691
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctctg 240  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||    ||||||||||||||||||||||    
T  44597790 gttttcgtcgttcgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccaccctccttgtgtctctg 44597691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 39857007 - 39857120
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||   ||||||    
T  39857007 aaaacatgatcgtcacgttttcgtcgttcgttaattccacccaagtggatgatactctcccctcgtcgagcattggacgtttataccgaacatgttccac 39857106  T
Q  225 cctccttgtgtctc 238  Q
    ||| ||||||||||    
T  39857107 ccttcttgtgtctc 39857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 49598993 - 49599090
Alignment:
Q  143 tttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctctg 240  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||| | |||||||||||||  ||||||||||||||| |||||||    
T  49598993 tttcgtcattctttaactccactcaagtgaatgatactctcccctcgtcgagtgttgaacgtttataccgaacgtattccaccctccttgcgtctctg 49599090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 13635414 - 13635510
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtct 237  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||| |||||||||||    
T  13635414 gttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtct 13635510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 36359462 - 36359538
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    |||||||||||||| ||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  36359462 acgctcctaccaaatgatgattgtatctccccaaattgatttgccaacatctcatctattttttgccaacaagtacc 36359538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 46180381 - 46180465
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccaccca-agtgaatgatactctcccctcatcgagcgttggatgtttat 208  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||    
T  46180381 aaaacatgctcgtcacgttttcgtcgttctttaactccacccagagtgaatgatactctcccctcgtcgagcgttggacgtttat 46180465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 17697151 - 17697036
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||| ||||||||||||||||||||||||||| || ||||  |||||| ||||| ||||||||| |||   ||||||    
T  17697151 aaaacatgctcgtcacgttttcgtcgtactttaactccacccaagtgaatgataccctacccttgtcgagcattggacgtttataccaaacgtgttccac 17697052  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||| ||||||||    
T  17697051 cctccttatgtctctg 17697036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 41780798 - 41780683
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||||||  |||||| ||||||||||||| |||| ||||||||||||||||||| | ||| ||| |||||||||||| |||||||||||||   ||||||    
T  41780798 aaaatatattcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattatcctctcgtcgagcgttggacgtttataccgaacgtgttccac 41780699  T
Q  225 cctccttgtgtctctg 240  Q
    ||| ||||||||||||    
T  41780698 ccttcttgtgtctctg 41780683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 44337420 - 44337535
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||  | || ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||    ||||||    
T  44337420 aaaacatgctcgtcacgttttcgtcgtttgtgaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccac 44337519  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  44337520 catccttgtgtctctg 44337535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 51269907 - 51269792
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||  |||| ||||||||| ||||||| ||||||||||| |||||||||||| |||||||| |||    ||||||    
T  51269907 aaaacatgctcgtcacgttttcgtcgtttgttaattccacccaactgaatgaaactctcccctcgtcgagcgttggacgtttatacagaaggtgttccac 51269808  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  51269807 cctccttgtgtctctg 51269792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 49427492 - 49427402
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaac 215  Q
    |||| |||||||||| ||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  49427492 aaaacatgctcgtcacgttttcgtcgttcgttaattccgcccaagtgaatgatactctcccctcgtcgagcgttggacatttataccgaac 49427402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 49263089 - 49263202
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||| ||  |||| ||||| ||||||||||||||||||||||| | |||||||||| |||||||||||||   ||||||    
T  49263089 aaaacatgctcgtcacgttttcgtcttttgttaattccactcaagtgaatgatactctcccctcgttgagcgttggacgtttataccgaacgtgttccac 49263188  T
Q  225 cctccttgtgtctc 238  Q
    ||| ||||||||||    
T  49263189 cctacttgtgtctc 49263202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 7404739 - 7404663
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    |||||||||||||| ||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||||||||||    
T  7404739 acgctcctaccaaatgatgattgtatctccccaaattgatttgccaacatctcatctattttatgccaacaagtacc 7404663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 27486791 - 27486906
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||  |||| ||||||||||||||| | ||||||||||| |||||||||||| ||||||||||||     || ||    
T  27486791 aaaacatgctcgtcacgttttcgtcgtttgttaattccacccaagtgaattaaactctcccctcgtcgagcgttggacgtttataccgaaggtgatctac 27486890  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  27486891 cctccttgtgtctctg 27486906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 50068360 - 50068475
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| ||||||  |||| |||||||||||| ||||||||||||||||||||||||| ||| ||||| ||||||  || |||||||||  |||||||    
T  50068360 aaaacatgttcgtcacatttttgtcgttctttaaatccacccaagtgaatgatactctccactcgtcgagtgttggaccttcataccgaacatattccac 50068459  T
Q  225 cctccttgtgtctctg 240  Q
    |||||||| |||||||    
T  50068460 cctccttgcgtctctg 50068475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 3658569 - 3658475
Alignment:
Q  134 tcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctc 228  Q
    |||||| ||||| ||||||| |||| |||||||||||||||||||||||| |||| |||||||||||| |||||||||||||   ||||||||||    
T  3658569 tcgtcacgtttttgtcgttcgttaattccacccaagtgaatgatactctctcctcgtcgagcgttggacgtttataccgaacgtgttccaccctc 3658475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 240
Target Start/End: Complemental strand, 19160413 - 19160307
Alignment:
Q  134 tcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgt 233  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||  || ||||||||| ||||||||| |||   ||||||| |||| ||    
T  19160413 tcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctccccttgtcaagcgttggacgtttataccaaacgtgttccaccatcctcgt 19160314  T
Q  234 gtctctg 240  Q
    |||||||    
T  19160313 gtctctg 19160307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 5765311 - 5765198
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| ||||| ||||||| |||| ||||||||| ||||||||| ||| || || |||||||||||| |||||||||||||  |||||||    
T  5765311 aaaacatgctcatcaagtttttgtcgttcgttaattccacccaactgaatgatattcttccatcgtcgagcgttggacgtttataccgaacgtattccac 5765212  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||| ||||    
T  5765211 cctccttgtatctc 5765198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 35526294 - 35526391
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctc 238  Q
    ||||||| ||||| |||| |||||||| ||||||||||||||| |||| |||||||||||| |||||||||||||   ||||||||||| ||||||||    
T  35526294 gttttcgacgttcgttaattccacccaggtgaatgatactctctcctcgtcgagcgttggacgtttataccgaacgcgttccaccctccctgtgtctc 35526391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 37778184 - 37778103
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgttt 206  Q
    |||| |||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||| || |||||||| |||||    
T  37778184 aaaacatgctcgtcacgttttcgtcgtcctttaattccacccaagtgaatgatactctcccctcgtcaagcgttggttgttt 37778103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 45689224 - 45689114
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||| | |||||||||||| |||   ||| |||  |||||||    
T  45689224 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattctccccccgtcgagcgttggacgtt--aaccaaacatattccac 45689127  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  45689126 cctccttgtgtct 45689114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 28864009 - 28863933
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||| ||| |||||||| || |||||||||||    
T  28864009 acgctcctaccaaacgatgattgtatctccccaaattggttttccaacaactcatctattttatgtcaacaagtacc 28863933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 49396809 - 49396697
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||| |||| |||| ||||| ||||||||||||||||||||||| |  | ||||||| |||||||||||||   ||||||    
T  49396809 aaaacatgctcgtcacgttttcgttgttcgttaattccactcaagtgaatgatactctcccctcgtaaatcgttggacgtttataccgaacgtgttccac 49396710  T
Q  225 cctccttgtgtct 237  Q
    ||||||| |||||    
T  49396709 cctccttatgtct 49396697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 16532193 - 16532304
Alignment:
Q  127 aatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccc 226  Q
    ||||||||| |||  |||||||||||| |||| ||||||||| | ||||||| |||| ||||||||||||||| | ||||||| |||||  |||||| ||    
T  16532193 aatatgctcatcacattttcgtcgttcgttaattccacccaacttaatgatattctctcctcatcgagcgttgtacgtttatatcgaacgtattccatcc 16532292  T
Q  227 tccttgtgtctc 238  Q
    ||||||||||||    
T  16532293 tccttgtgtctc 16532304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 49926481 - 49926595
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| ||||||||||||| |||| ||| | ||||||||||| ||||||||||| |||||||||||| |||||||||||||   ||||||    
T  49926481 aaaacatgctcctcacgttttcgtcgttcgttaattccgcacaagtgaatgacactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 49926580  T
Q  225 cctccttgtgtctctg 240  Q
    || |||| ||||||||    
T  49926581 cc-ccttctgtctctg 49926595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 24363917 - 24364003
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccct 227  Q
    ||||||||||||| |||| || |||||||||| ||||| ||||||||| |||||||||||| |||||||||||||  ||||||||||    
T  24363917 gttttcgtcgttcattaattctacccaagtgattgatattctcccctcgtcgagcgttggacgtttataccgaacgtattccaccct 24364003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 20240775 - 20240718
Alignment:
Q  66 attgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  20240775 attgtatctccccaaattggtttgccaacatctcatctattttttcccaacaagtacc 20240718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 16098078 - 16098146
Alignment:
Q  170 tgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctc 238  Q
    ||||||||| |||||| || |||||||||||| |||||||||||||  |||||||||||||||||||||    
T  16098078 tgaatgatattctcccatcgtcgagcgttggacgtttataccgaacgtattccaccctccttgtgtctc 16098146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 16081390 - 16081300
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaac 215  Q
    |||| |||||| ||||||| ||||||||| |||| |||||| || |||||||||  |||||||| |||||||||| | |||||||||||||    
T  16081390 aaaacatgctcctcatgttatcgtcgttcgttaattccacctaactgaatgatatcctcccctcgtcgagcgttgaacgtttataccgaac 16081300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 17372815 - 17372717
Alignment:
Q  142 ttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctctg 240  Q
    ||||||||||||  ||| |||||| ||||| || ||| ||||||||| |||||||||||| |||||||||||||  ||| ||||||| ||| |||||||    
T  17372815 ttttcgtcgttcgctaattccacctaagtggattatattctcccctcgtcgagcgttggacgtttataccgaacatatttcaccctctttgcgtctctg 17372717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 13148408 - 13148365
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcc 184  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  13148408 gttttcgtcgttcgttaattccacccaagtgaatgatactctcc 13148365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15142643 - 15142606
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||||| |||||||||||||||||||||||||||||    
T  15142643 atacgattcttaaccctagaatccttattgtacttttt 15142606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12020216 - 12020180
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  12020216 atacgattcttaaccctagaatccttattgtactttt 12020180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 18433328 - 18433364
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  18433328 atacgattcttaaccctagaatccttattgtactttt 18433364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 20442649 - 20442685
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  20442649 atacgattcttaaccctagaatccttattgtactttt 20442685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 20514510 - 20514546
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  20514510 atacgattcttaaccctagaatccttattgtactttt 20514546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 15158067 - 15158032
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  15158067 acgattcttaaccctagaatccttattgtacttttt 15158032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 19749659 - 19749694
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  19749659 acgattcttaaccctagaatccttattgtacttttt 19749694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 19751885 - 19751920
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  19751885 acgattcttaaccctagaatccttattgtacttttt 19751920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 20435232 - 20435197
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  20435232 acgattcttaaccctagaatccttattgtacttttt 20435197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 36910466 - 36910431
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  36910466 acgattcttaaccctagaatccttattgtacttttt 36910431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 15471568 - 15471510
Alignment:
Q  180 tctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctc 238  Q
    ||||||||| |||| ||||||||||| ||||| |||  ||||||| |||||||||||||    
T  15471568 tctcccctcgtcgaacgttggatgttcataccaaacgtattccacactccttgtgtctc 15471510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 24276818 - 24276784
Alignment:
Q  3 acgatttttaaccctagaatccttattgtactttt 37  Q
    |||||| ||||||||||||||||||||||||||||    
T  24276818 acgattcttaaccctagaatccttattgtactttt 24276784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 24280931 - 24280897
Alignment:
Q  3 acgatttttaaccctagaatccttattgtactttt 37  Q
    |||||| ||||||||||||||||||||||||||||    
T  24280931 acgattcttaaccctagaatccttattgtactttt 24280897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 41217704 - 41217609
Alignment:
Q  142 ttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtct 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  41217704 ttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttgaatttttataccgaactaattccaccctccttgtgtct 41217609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 43351199 - 43351314
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||   ||||||    
T  43351199 aaaacatgctcgtcatgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcatcgagcgttggacgtttatactgaacgtgttccac 43351298  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  43351299 cctccttgtgtctctg 43351314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 18237671 - 18237556
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| || |||||||||||||  |||||||    
T  18237671 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatcctctccccttgtcgagcgttagacgtttataccgaacgtattccac 18237572  T
Q  225 cctccttgtgtctctg 240  Q
    | |||||| |||||||    
T  18237571 catccttgcgtctctg 18237556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 48220847 - 48220949
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcc 229  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||  ||||||||||||    
T  48220847 atgctcgtcacgttttcgtcgttctttaactccaccaaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctcc 48220946  T
Q  230 ttg 232  Q
    |||    
T  48220947 ttg 48220949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 26603305 - 26603420
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||| || |||||||||||| |||||||||||||  |||||||    
T  26603305 aaaacatgctcgtcacgttttcgtcgctctttaattccacccaagtgaatgataccctcccttcgtcgagcgttggacgtttataccgaacgtattccac 26603404  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  26603405 cctccttgtgtctctg 26603420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 47269005 - 47268891
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||| |||||  |||||||    
T  47269005 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgctggacgtttata-cgaacgtattccac 47268907  T
Q  225 cctccttgtgtctctg 240  Q
    |||||||| |||||||    
T  47268906 cctccttgcgtctctg 47268891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 28114490 - 28114608
Alignment:
Q  122 cctaaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattc 221  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| ||| |||||||| |||||||||||||   |||    
T  28114490 cctaaaacatgctcgtcatgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgggcgttggacgtttataccgaacgtgttc 28114589  T
Q  222 caccctccttgtgtctctg 240  Q
    |||||||||||| ||||||    
T  28114590 caccctccttgtttctctg 28114608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 17839430 - 17839315
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||| || |||   ||||||    
T  17839430 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcatcgagcgttggacgtttattccaaacgtcttccac 17839331  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  17839330 catccttgtgtctctg 17839315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 20378803 - 20378918
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | | || ||||| |||||||||||||  |||||||    
T  20378803 aaaacatgttcgtcacgttttcgtcgttctttaactccacccaagtgaatgataccctcccctcgttgtgcattggacgtttataccgaacgtattccac 20378902  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  20378903 cctccttgtgtctctg 20378918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 39477340 - 39477455
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||| |||||||||||| |||||||| ||||   ||||||    
T  39477340 aaaacatgctcgtcatgttttcgtcgttctttaattccacccaagtgaatgatatcctcccctcgtcgagcgttggacgtttatactgaacgtgttccac 39477439  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||| ||||    
T  39477440 cctccttgtgtatctg 39477455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 2356396 - 2356282
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||| ||||||| |||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||    
T  2356396 aaaacatgctcgtcacatttttgtcgttcgttaattccatccaagtgaatgatactctcccctcttcgagcgttggatgtttataccgaacgtgttccac 2356297  T
Q  225 cctccttgtgtctct 239  Q
    |||||||||||||||    
T  2356296 cctccttgtgtctct 2356282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 30360624 - 30360512
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||| | |||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| |  ||||||||||||  |||||||    
T  30360624 aaaacatgctcgttacgttttcgtcgttttttaattccacccaagtgaatgatactctcccctcgtcgagcgttgtacatttataccgaacgtattccac 30360525  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  30360524 cctccttgtgtct 30360512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 34140962 - 34140858
Alignment:
Q  135 cgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtg 234  Q
    ||||| ||||||||||||  |||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||    
T  34140962 cgtcacgttttcgtcgtttgttaattccacccaaatgaatgatactctcccctcgtcgagcgttggatgtttataccgaaattgttccaccctccttgtg 34140863  T
Q  235 tctct 239  Q
    |||||    
T  34140862 tctct 34140858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 46862301 - 46862409
Alignment:
Q  132 gctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcctt 231  Q
    |||||||| ||||||||||||| |||| |||| |||||||||||||||||||||||| |||||||||||| |||||||||||||   |||||||||||||    
T  46862301 gctcgtcacgttttcgtcgttcgttaattccatccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctcctt 46862400  T
Q  232 gtgtctctg 240  Q
     ||||||||    
T  46862401 ctgtctctg 46862409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 48270755 - 48270640
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||| || ||||||||||   ||||||    
T  48270755 aaaacatgctcgtcacgttttcgtcgttcgttaattccactcaagtgaatgatactctcccctcgtcgagcgttggacgtctataccgaacgtgttccac 48270656  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||| ||||||||    
T  48270655 cctccttttgtctctg 48270640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 40588656 - 40588542
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||||||||||||||||| |||| |||||||||| |||||| ||||||||||| |||||||||||| ||||||||||||    ||||||    
T  40588656 aaaacatgctcatcatgttttcgtcgttcgttaattccacccaagcgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccac 40588557  T
Q  225 cctccttgtgtctct 239  Q
    |||||||||||||||    
T  40588556 cctccttgtgtctct 40588542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 25569597 - 25569673
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  25569597 acgctcctaccaaacgatgattgtatctccccaaattggtttgccaacatctcatctattttatgccaacaagtacc 25569673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 36393924 - 36394036
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||| ||||||||||||| ||||||||| ||||| |||||| |||||||||||||   ||||||    
T  36393924 aaaacatgctcgtcacgttttcgtcgttcgttaattccacacaagtgaatgatattctcccctcgtcgagtgttggacgtttataccgaacgtgttccac 36394023  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  36394024 cctccttgtgtct 36394036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 40442470 - 40442546
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  40442470 acgctcctaccaaacgatgattgtatctccccaaattggtttgccaacatctcatctattttgtgccaacaagtacc 40442546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 43378250 - 43378326
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  43378250 acgctcctaccaaacgatgattgtatctccccaaattggtttgccaacatctcatctattttttcccaacaagtacc 43378326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 21187399 - 21187514
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||  || |||| || |||||||||||||||||||||||||| |||||||||||| |||||||||||||   || |||    
T  21187399 aaaacatgctcgtcacgttttcgtcaatcgttaattctacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgtttcac 21187498  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  21187499 cctccttgtgtctctg 21187514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 42735369 - 42735255
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||| ||| |||||||||||||| |||||||||||||   ||||||    
T  42735369 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgataatcttccc-catcgagcgttggacgtttataccgaacgtgttccac 42735271  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||| ||||||||    
T  42735270 cctccttctgtctctg 42735255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 10523175 - 10523061
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| |||| | |||||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||    
T  10523175 aaaacatgctcgtcacgttttcgtcgttcgttaattccaacaaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccac 10523076  T
Q  225 cctccttgtgtctct 239  Q
    | |||||||||||||    
T  10523075 catccttgtgtctct 10523061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 41048890 - 41048776
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||  ||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||||| |||||||||||||   |||||     
T  41048890 aaaacatgctcgtcgcgttttcgtcgttcgttaattccacccaagtgaatgatactctcacctcgtcgagcgttggacgtttataccgaacgtgttccat 41048791  T
Q  225 cctccttgtgtctct 239  Q
    ||||||| |||||||    
T  41048790 cctccttctgtctct 41048776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 28979122 - 28979234
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||| |||| || |||| | ||||||||||||||||||||||| ||| |||||||||||| |||||||||||||   ||||||    
T  28979122 aaaacatgctcgtcacgtttttgtcgctcgttaatttcacccaagtgaatgatactctcctctcgtcgagcgttggacgtttataccgaacgtgttccac 28979221  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  28979222 cctccttgtgtct 28979234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 46792444 - 46792368
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||    
T  46792444 acgctcctaccaaacgatgattgtatctccccaaattggtttgccaacatctcatctattttacgccaacaagtacc 46792368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 125 - 215
Target Start/End: Original strand, 30354915 - 30355005
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaac 215  Q
    |||| |||||||||| ||||||||||||| |||| |||||||||||||||||||| |||||||| |||| ||||||| |||||||||||||    
T  30354915 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatacgctcccctcgtcgaacgttggacgtttataccgaac 30355005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 1298102 - 1298029
Alignment:
Q  50 ctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    |||||||||||||||||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||||||    
T  1298102 ctcctaccaaacgatgattgtatctctccaaattgctttgccaacatctcatctattttttgccaacaagtacc 1298029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 21614860 - 21614973
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||  ||||||||||||| |||| ||||||||| ||||||||||||| ||||| |||||||||| | ||||||| |||||   ||||||    
T  21614860 aaaacatgctcgtcgcgttttcgtcgttcgttaattccacccaaatgaatgatactcttccctcgtcgagcgttgaacgtttatatcgaacgtgttccac 21614959  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  21614960 cctccttgtgtctc 21614973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 21650626 - 21650518
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcc 229  Q
    ||||||||||  |||||||||||| |||| ||| ||||| ||||||||||||||||||| |||||||||||| |||||||  ||||   |||||||||||    
T  21650626 atgctcgtcacattttcgtcgttcgttaattcctcccaactgaatgatactctcccctcgtcgagcgttggacgtttataatgaacgtgttccaccctcc 21650527  T
Q  230 ttgtgtctc 238  Q
    |||||||||    
T  21650526 ttgtgtctc 21650518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 15338005 - 15338120
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| ||||||||||||  |||| ||||||||| ||||||||||||||||||| | |||||||| |  ||||||||||||   ||||||    
T  15338005 aaaacatgctcatcacgttttcgtcgtttgttaattccacccaactgaatgatactctcccctcgttgagcgttgaacatttataccgaacgtgttccac 15338104  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  15338105 cctccttgtgtctctg 15338120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 20564866 - 20564751
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  20564866 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 20564767  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  20564766 catccttgtgtctctg 20564751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 48315280 - 48315395
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| |||||||||||||||||| |||||| ||| | |||||||||| ||||||||| |||   ||||||    
T  48315280 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatgctctcctctcgttgagcgttggacgtttataccaaacgtgttccac 48315379  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||| | ||||||    
T  48315380 cctccttctatctctg 48315395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 17183319 - 17183205
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||||||||||| ||| ||||| ||||| |||||| ||||||||| |||   || |||    
T  17183319 aaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattcttccctcgtcgagtgttggacgtttataccaaacgtgttacac 17183220  T
Q  225 cctccttgtgtctct 239  Q
    |||||||||||||||    
T  17183219 cctccttgtgtctct 17183205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 240
Target Start/End: Complemental strand, 42683052 - 42682948
Alignment:
Q  136 gtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgt 235  Q
    |||| |||||||| |||| |||| |||||| |||||||||||| ||||||||| |||  ||||||| |||||||||||||   |||||||||||||||||    
T  42683052 gtcacgttttcgttgttcgttaattccaccaaagtgaatgatattctcccctcgtcgttcgttggacgtttataccgaacgtgttccaccctccttgtgt 42682953  T
Q  236 ctctg 240  Q
    |||||    
T  42682952 ctctg 42682948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 45168199 - 45168275
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||| |||||||    
T  45168199 acgctcctaccaaacgatgattgtatctcccaaaattgatttgccaacatctcatctattttatgccaataagtacc 45168275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 45363343 - 45363458
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||| ||  |||| ||||||||||||||||| ||||||  ||| |||||||||||| |||||||| |||    ||||||    
T  45363343 aaaacatgctcgtcacgttttcgtcatttgttaattccacccaagtgaatgaaactctctgctcgtcgagcgttggacgtttatactgaaggtgttccac 45363442  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  45363443 cctccttgtgtctctg 45363458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 13916923 - 13916825
Alignment:
Q  142 ttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctctg 240  Q
    |||| ||| ||| |||| || |||||||||||||||||||||||||| |||||||||||| ||||||||| ||    ||||||| ||||||||||||||    
T  13916923 tttttgtcattcgttaattcaacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaatgtgttccaccatccttgtgtctctg 13916825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 1642687 - 1642800
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| |||||| |||||| |||| ||||||||| | ||||||| ||||||||| ||||| |||| | ||||||| | |||  |||||||    
T  1642687 aaaacatgctcctcacgttttcatcgttcgttaattccacccaactaaatgatattctcccctcgtcgagtgttgaacgtttatatcaaacgtattccac 1642786  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  1642787 cctccttgtgtctc 1642800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 44357144 - 44357181
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||||| |||||||||||||||||||||||||||||    
T  44357144 atacgattcttaaccctagaatccttattgtacttttt 44357181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 44360266 - 44360303
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||||| |||||||||||||||||||||||||||||    
T  44360266 atacgattcttaaccctagaatccttattgtacttttt 44360303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 11544872 - 11544908
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  11544872 atacgattcttaaccctagaatccttattgtactttt 11544908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 8726391 - 8726430
Alignment:
Q  198 tggatgtttataccgaactaattccaccctccttgtgtct 237  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  8726391 tggacgtttataccgaacttattccaccctccttgtgtct 8726430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 23532499 - 23532465
Alignment:
Q  3 acgatttttaaccctagaatccttattgtactttt 37  Q
    |||||| ||||||||||||||||||||||||||||    
T  23532499 acgattcttaaccctagaatccttattgtactttt 23532465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 37278709 - 37278672
Alignment:
Q  2 tacgatttttaaccctagaatccttattgtactttttt 39  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  37278709 tacgattcttaaccctagaatccttatcgtactttttt 37278672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 5e-40; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 12968399 - 12968514
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||  |||||||    
T  12968399 aaaacatgctcgtaacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcattggacgtttataccgaacgtattccac 12968498  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  12968499 cctccttgtgtctctg 12968514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 22493380 - 22493265
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  |||||||    
T  22493380 aaaacatgctcgtcacgttttcgccgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtattccac 22493281  T
Q  225 cctccttgtgtctctg 240  Q
    |||||||| |||||||    
T  22493280 cctccttgcgtctctg 22493265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 2919462 - 2919577
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||   ||||||    
T  2919462 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcatcgagcgttggacgtttatacagaacgtgttccac 2919561  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  2919562 cctccttgtgtctctg 2919577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 10364734 - 10364849
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  10364734 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 10364833  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  10364834 cctccttgtgtctctg 10364849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 19471731 - 19471846
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  19471731 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 19471830  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  19471831 cctccttgtgtctctg 19471846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 35491744 - 35491629
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  35491744 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 35491645  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  35491644 cctccttgtgtctctg 35491629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 42120121 - 42120014
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||  ||||||||||||  |||||||    
T  42120121 aaaacatgctcgtcacattttcgtcgttctttaactccgcccaagtgaatgatactctcccctcgtcgagcgttggacatttataccgaacgtattccac 42120022  T
Q  225 cctccttg 232  Q
    ||||||||    
T  42120021 cctccttg 42120014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 18392146 - 18392032
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaacta----att 220  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||| ||||||||||||| |    |||    
T  18392146 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtaaatgatactctcccctcgtcaagcgttggacgtttataccgaacgaacgtatt 18392047  T
Q  221 ccaccctccttgtgt 235  Q
    |||||||||||||||    
T  18392046 ccaccctccttgtgt 18392032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 29111267 - 29111155
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||||||| |||||||| ||||   ||||||    
T  29111267 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagcgttggacgtttatactgaacgtgttccac 29111168  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  29111167 cctccttgtgtct 29111155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 29906680 - 29906584
Alignment:
Q  136 gtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttg 232  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||||  |||||||||||||||    
T  29906680 gtcacgttttcgtcgttctttaacttcacccaagtgaatgatactctccccacgtcgagcgttggacgtttataccgaacgtattccaccctccttg 29906584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 3941846 - 3941731
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||| |||||||| |||    ||||||    
T  3941846 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttatactgaaggtgttccac 3941747  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  3941746 cctccttgtgtctctg 3941731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 32734756 - 32734641
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||| ||||  ||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||||||| |||  |||||||    
T  32734756 aaaacatgcttgtcacattttcgtagttctttaactccacccaagtgaatgataccctcccctcgtcgagcgttgaacgtttataccaaacgtattccac 32734657  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  32734656 cctccttgtgtctctg 32734641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 34521781 - 34521896
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| | ||||||| || |||||||||||||   || |||    
T  34521781 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgttgagcgtttgacgtttataccgaacgtgtttcac 34521880  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  34521881 cctccttgtgtctctg 34521896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 41499191 - 41499306
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| |||||||| || ||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  41499191 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaggttaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 41499290  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||| ||||||||    
T  41499291 cctccttctgtctctg 41499306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 42241196 - 42241311
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||||| ||||||||||||    || |||    
T  42241196 aaaacatgctcgtcacgttttcgttgttctttaattccacccaagtgaatgataccctcccctcgtcgagcgttggacgtttataccgaatgtgtttcac 42241295  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  42241296 cctccttgtgtctctg 42241311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 10360296 - 10360406
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||| |||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||   ||||||    
T  10360296 aaaacatgctcgtcacgttttcatcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttatacagaacgtgttccac 10360395  T
Q  225 cctccttgtgt 235  Q
    |||||||||||    
T  10360396 cctccttgtgt 10360406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 5420578 - 5420465
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||   ||||||    
T  5420578 aaaacatgttcgtcacgttttcgtcgttcgttaattccactcaagtgaatgatactctcccctcgtcgagcgttggacgtttatatcgaacgtgttccac 5420479  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  5420478 cctccttgtgtctc 5420465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 27130606 - 27130719
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||||| | |||||||||| ||||||||||||    ||||||    
T  27130606 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattctcccctcgttgagcgttggacgtttataccgaatgtgttccac 27130705  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  27130706 cctccttgtgtctc 27130719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 37312592 - 37312705
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||||||||| |||||||||||||   |||||     
T  37312592 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaactgaatgataatctcccctcgtcgagcgttggacgtttataccgaacgtgttccat 37312691  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  37312692 cctccttgtgtctc 37312705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 238
Target Start/End: Complemental strand, 20148230 - 20148114
Alignment:
Q  122 cctaaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattc 221  Q
    ||||||| ||||| ||||||||||||||||||||||| ||| ||||| | ||||||| ||||||||| | |||||||||| |||||||||||||  |||     
T  20148230 cctaaaacatgctagtcatgttttcgtcgttctttaattccccccaactaaatgatattctcccctcgttgagcgttggacgtttataccgaacatattt 20148131  T
Q  222 caccctccttgtgtctc 238  Q
    |||||||||||||||||    
T  20148130 caccctccttgtgtctc 20148114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 16581931 - 16581816
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||| ||  ||||||||| || |||| ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||   ||||||    
T  16581931 aaaacatgctcgacacattttcgtcgctcgttaattccacccaagtgaatgatactctcccctcgtcgagcattggacgtttataccgaacgtgttccac 16581832  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  16581831 cctccttgtgtctctg 16581816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 6976945 - 6976832
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| | |||||||||||||||||| ||||  || |||||||||||| |||||||||||||   ||||||    
T  6976945 aaaacatgctcgtcacgttttcgtcgttcgttaatttcacccaagtgaatgatacactcc--tcgtcgagcgttggacgtttataccgaacatgttccac 6976848  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  6976847 cctccttgtgtctctg 6976832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 33404124 - 33404012
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||| ||| ||||||||||| | ||||| |||||||||||| |||||||||||||  |||||||    
T  33404124 aaaacatgctcgtcacgttttcgtcgttcgttaattccacacaactgaatgatactattccctcgtcgagcgttggacgtttataccgaacgtattccac 33404025  T
Q  225 cctccttgtgtct 237  Q
    |||| ||||||||    
T  33404024 cctctttgtgtct 33404012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 39394000 - 39393885
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||  || | ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||    || |||    
T  39394000 aaaacatgctcgtcacgttttcgtcgtttgttgattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttacac 39393901  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  39393900 cctccttgtgtctctg 39393885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 6902075 - 6901962
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||||||||| |||||| |||||    ||| ||    
T  6902075 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaactgaatgatattctcccctcgtcgagcgttggacgtttatgccgaatgtgttcaac 6901976  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  6901975 cctccttgtgtctc 6901962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 17796201 - 17796314
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| ||||||||||||| |||| ||||||||| ||||||||||||||| ||| |||||||||||||||||||||  |||   ||||||    
T  17796201 aaaacatgctcttcacgttttcgtcgttcgttaattccacccaactgaatgatactctccactcgtcgagcgttggatgtttatacttaacgtgttccac 17796300  T
Q  225 cctccttgtgtctc 238  Q
    ||||| ||||||||    
T  17796301 cctccctgtgtctc 17796314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 39799955 - 39800051
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtct 237  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||  |||||||||||| ||||||||| |||   ||||||| |||||||||||    
T  39799955 gttttcgtcgttcgttaattccacccaagtgaatgatactctccccttgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtct 39800051  T

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Target: chr2; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 3937161 - 3937276
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  3937161 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 3937260  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  3937261 catccttgtgtctctg 3937276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 22001943 - 22001828
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||| ||||||||||||||| ||||||||| |||||||||||| ||||||||| |||   ||| ||    
T  22001943 aaaacatggtcgtcacgttttcgtcgttcgttaattcctcccaagtgaatgatattctcccctcgtcgagcgttggacgtttataccaaacgtgttctac 22001844  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  22001843 catccttgtgtctctg 22001828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 34639074 - 34638960
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||  |||| ||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||    |||||     
T  34639074 aaaacatgctcgtcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgttgagcgttggacgtttataccgaaggtgttcca- 34638976  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  34638975 cctccttgtgtctctg 34638960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 43982965 - 43982850
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  43982965 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 43982866  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  43982865 catccttgtgtctctg 43982850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 17424898 - 17424784
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  17424898 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 17424799  T
Q  225 cctccttgtgtctct 239  Q
    | |||||||||||||    
T  17424798 catccttgtgtctct 17424784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 29067838 - 29067726
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| ||||||  |||||||| ||| |||| | ||||||||||||||||| ||||||||| |||||||||||| ||||||||| |||   ||||||    
T  29067838 aaaacatggtcgtcacattttcgtcattcgttaattgcacccaagtgaatgatattctcccctcgtcgagcgttggacgtttataccaaacgtgttccac 29067739  T
Q  225 cctccttgtgtct 237  Q
    | |||||||||||    
T  29067738 catccttgtgtct 29067726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 28422418 - 28422491
Alignment:
Q  50 ctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||| |||||||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||| ||||    
T  28422418 ctcctaccaaatgatgattgtatctctccaaattggattgccaacatctcatctattttttcccaacaaatacc 28422491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 9638766 - 9638818
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  9638766 acgctcctaccaaacgatgattgtatctccccaaattggttttccaacatctc 9638818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 16253565 - 16253474
Alignment:
Q  145 tcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtc 236  Q
    |||||||||||||| ||||||||| | ||||||| |||||| || |  || |||||  |||||||||||||  |||||||||||||||||||    
T  16253565 tcgtcgttctttaattccacccaacttaatgatattctcccatcgttaagtgttgggcgtttataccgaacgtattccaccctccttgtgtc 16253474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 31770427 - 31770360
Alignment:
Q  170 tgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtct 237  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||  ||| || |||||||||||||    
T  31770427 tgaatgatactctcccctcgtcgaacgttggacgtttataccgaacatattacatcctccttgtgtct 31770360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 40678763 - 40678827
Alignment:
Q  176 atactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctctg 240  Q
    |||||||||| || ||||| |||||| |||||||||||||   ||||||||||||||||||||||    
T  40678763 atactctcccttcgtcgagtgttggacgtttataccgaacgcgttccaccctccttgtgtctctg 40678827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 40677477 - 40677527
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatact 180  Q
    |||||||||| ||||||||||||| |||| |||||||||||| ||||||||    
T  40677477 atgctcgtcacgttttcgtcgttcgttaattccacccaagtggatgatact 40677527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 5771999 - 5772034
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  5771999 acgattcttaaccctagaatccttattgtacttttt 5772034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 26126072 - 26126037
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  26126072 acgattcttaaccctagaatccttattgtacttttt 26126037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 7310866 - 7310838
Alignment:
Q  10 ttaaccctagaatccttattgtacttttt 38  Q
    |||||||||||||||||||||||||||||    
T  7310866 ttaaccctagaatccttattgtacttttt 7310838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23692874 - 23692910
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  23692874 atacgattcttaaccctagaatccttgttgtactttt 23692910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23696661 - 23696697
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  23696661 atacgattcttaaccctagaatccttgttgtactttt 23696697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 33799650 - 33799757
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||  |||||||    
T  33799650 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataacgaacatattccac 33799749  T
Q  225 cctccttg 232  Q
    ||||||||    
T  33799750 cctccttg 33799757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 40415372 - 40415257
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||| |||||||||||||   ||||||    
T  40415372 aaaacatgctcgtcacgttttcgtcgttctttaattccacccaagtgaatgataccctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 40415273  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  40415272 cctccttgtgtctctg 40415257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 26484692 - 26484580
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  26484692 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 26484593  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  26484592 cctccttgtgtct 26484580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 28706241 - 28706356
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||||| |||||||||||| |||||||||||||  |||||||    
T  28706241 aaaacatgctcgtcacgttttcgttgttctttaactccactcaagtgaatgatattctcccctcgtcgagcgttggacgtttataccgaacgtattccac 28706340  T
Q  225 cctccttgtgtctctg 240  Q
    |||||||| |||||||    
T  28706341 cctccttgcgtctctg 28706356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 43638776 - 43638883
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||  |||||||    
T  43638776 aaaacatgctcgtcacattttcgtcgttctttaactccacccaagtgaaggatactctcccctcgtcgagcgttggacgtttataccgaacgtattccac 43638875  T
Q  225 cctccttg 232  Q
    ||||||||    
T  43638876 cctccttg 43638883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 18440391 - 18440509
Alignment:
Q  122 cctaaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattc 221  Q
    ||||||| |||||||||| |||||| |||||| |||| || |||||||||||||||||||||||||| |||||||||||| |||||||||||||   |||    
T  18440391 cctaaaacatgctcgtcacgttttcatcgttcgttaattctacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttc 18440490  T
Q  222 caccctccttgtgtctctg 240  Q
    |||||||||||||||||||    
T  18440491 caccctccttgtgtctctg 18440509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 41857073 - 41857188
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||||||||||||||  |||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  41857073 aaaatatgctcgtcacattttcgtcgttcgttaattccacccaagttaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 41857172  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||| ||||||||    
T  41857173 cctccttctgtctctg 41857188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 19242261 - 19242375
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||| ||||||| |||| | ||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  19242261 aaaacatgctcgtcacgtttttgtcgttccttaattacacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 19242360  T
Q  225 cctccttgtgtctct 239  Q
    |||||||||||||||    
T  19242361 cctccttgtgtctct 19242375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 19315445 - 19315559
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||| ||||||| |||| | ||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  19315445 aaaacatgctcgtcacgtttttgtcgttccttaattacacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 19315544  T
Q  225 cctccttgtgtctct 239  Q
    |||||||||||||||    
T  19315545 cctccttgtgtctct 19315559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 15032423 - 15032538
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||    
T  15032423 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccac 15032522  T
Q  225 cctccttgtgtctctg 240  Q
    | | ||||||||||||    
T  15032523 catacttgtgtctctg 15032538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 26452440 - 26452325
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||  |||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||    ||||||    
T  26452440 aaaacatgctcgtcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccac 26452341  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  26452340 cctccttgtgtctctg 26452325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 40414725 - 40414610
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||| || |||||||||||||   ||||||    
T  40414725 aaaacatgctcgtcacgttttcgtcgttctttaattccacccaagtgaatgataccctcccctcgtcgagtgttagacgtttataccgaacgtgttccac 40414626  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  40414625 cttccttgtgtctctg 40414610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 43693252 - 43693137
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||| ||||||||| |||||||||  ||||||||  ||||||||||| |||||||||||||   ||||||    
T  43693252 aaaacatgctcgtcacgttttcgtcgttctttaattccacccaaatgaatgatatcctcccctcgccgagcgttggacgtttataccgaacgtgttccac 43693153  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  43693152 cctccttgtgtctctg 43693137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 44943180 - 44943295
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||   || |||    
T  44943180 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttatatcgaacgtgttacac 44943279  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  44943280 catccttgtgtctctg 44943295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 34615068 - 34614955
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| | ||||||||||||||||||| ||||||| |||||||||||| |||||||||||||   ||||||    
T  34615068 aaaacatgttcgtcacgttttcgtcgttcgttaatttcacccaagtgaatgatactttcccctcgtcgagcgttggacgtttataccgaacgtgttccac 34614969  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  34614968 cctccttgtgtctc 34614955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 41363771 - 41363658
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| || || ||||||||||   ||||||    
T  41363771 aaaacatgctcgtcacattttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttagacgtgtataccgaacgtgttccac 41363672  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  41363671 cctccttgtgtctc 41363658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 38034024 - 38034136
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||| | |||||||| | |||||||||||||   ||||||    
T  38034024 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaggtgaatgatactctcccctcgtagagcgttgaacgtttataccgaacgtgttccac 38034123  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  38034124 cctccttgtgtct 38034136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 43611245 - 43611321
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  43611245 acgctcctatcaaacgatgattgtatctccccaaattggtttgtcaacatctcatctattttatgccaacaagtacc 43611321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 44321957 - 44321881
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  44321957 acgctcctaccaaacgatgattgtatctccccaaattggtttgccaacatctcatctattttatgccaacaagtacc 44321881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 41275509 - 41275394
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||  |||| ||||||||||||||||| ||||||||||| ||||||||| || ||||||||||||    ||||||    
T  41275509 aaaacatgctcgtcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgtttgacgtttataccgaaggtgttccac 41275410  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  41275409 cctccttgtgtctctg 41275394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 42603569 - 42603454
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| |||||||||||||||||||| |||||||| |||||| ||||| |||||||||||||   |||| |    
T  42603569 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgataccctcccctcgtcgagcattggacgtttataccgaacgtgttccgc 42603470  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||| ||||||||    
T  42603469 cctccttctgtctctg 42603454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 24861458 - 24861344
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||||||||||  |||| ||||||||||||||||||||||||||| | |||||||||||| ||||||||||||    ||||||    
T  24861458 aaaacatgctcgtcacattttcgtcgtttgttaattccacccaagtgaatgatactctccccccgtcgagcgttggacgtttataccgaaggtgttccac 24861359  T
Q  225 cctccttgtgtctct 239  Q
    |||||||||||||||    
T  24861358 cctccttgtgtctct 24861344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 42169059 - 42169172
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||| |||| |||| |||||||||| |||||||||| ||||||| |||||||||||| |||||||||||||   ||||||    
T  42169059 aaaacatgctcgtcacgttttcgttgttcgttaattccacccaagggaatgatactttcccctcgtcgagcgttggacgtttataccgaacgcgttccac 42169158  T
Q  225 cctccttgtgtctc 238  Q
    |||||| |||||||    
T  42169159 cctcctcgtgtctc 42169172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 22548378 - 22548263
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||| ||  |||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    ||||||    
T  22548378 aaaacatgctcgtcacgttttcgtcatttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttatatcgaatgtgttccac 22548279  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  22548278 cctccttgtgtctctg 22548263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 45118045 - 45117972
Alignment:
Q  50 ctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  45118045 ctcctaccaaacaatgattgtatctctccaaattggtttgccaacatctcatctattttttgccaacaagtacc 45117972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 16575791 - 16575695
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtct 237  Q
    |||||||| |||| |||| ||||||||| ||||||| ||||||| ||| |||||||||||| |||||||||||||  ||||||||||||||||||||    
T  16575791 gttttcgttgttcgttaattccacccaactgaatgaaactctcctctcgtcgagcgttggacgtttataccgaacgtattccaccctccttgtgtct 16575695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 485357 - 485472
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  485357 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 485456  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  485457 catccttgtgtctctg 485472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 2417030 - 2416915
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||  ||||  |||||| ||||||||||||    ||||||    
T  2417030 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgaaactctccccttgtcgaatgttggacgtttataccgaaggtgttccac 2416931  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||| ||||    
T  2416930 cctccttgtgtttctg 2416915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 40702475 - 40702360
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||| || |||| ||||||| |||||||| ||||   ||||||    
T  40702475 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattctcccttcgtcgaacgttggacgtttatactgaacgtgttccac 40702376  T
Q  225 cctccttgtgtctctg 240  Q
     |||||| ||||||||    
T  40702375 tctccttctgtctctg 40702360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 31171926 - 31172028
Alignment:
Q  136 gtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgt 235  Q
    |||||||  ||||||||| |||| ||||||||| ||||||||| |||||| || |||| ||||||| |||||||||||||  ||||||||||||||||||    
T  31171926 gtcatgtcgtcgtcgttcattaattccacccaactgaatgatattctcccatcgtcgaacgttggacgtttataccgaacgtattccaccctccttgtgt 31172025  T
Q  236 ctc 238  Q
    |||    
T  31172026 ctc 31172028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 23222615 - 23222539
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||| |||||||| ||||||||||||||||||||  |||||||| |||||||||| ||||||||||||    
T  23222615 acgctcctaccaaccgatgattatatctccccaaattggtttgctaacatctcatctattttttcccaacaagtacc 23222539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 3589385 - 3589478
Alignment:
Q  145 tcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctc 238  Q
    ||||||||| |||| ||||||||| ||||||||| |||||| |   | | |||| || |||||||||||||  |||||||||||||||||||||    
T  3589385 tcgtcgttcattaattccacccaactgaatgatattctcccatagacaatcgtttgacgtttataccgaacgtattccaccctccttgtgtctc 3589478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20131802 - 20131765
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||||| |||||||||||||||||||||||||||||    
T  20131802 atacgattcttaaccctagaatccttattgtacttttt 20131765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20134927 - 20134890
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||||| |||||||||||||||||||||||||||||    
T  20134927 atacgattcttaaccctagaatccttattgtacttttt 20134890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21945932 - 21945968
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  21945932 atacgattcttaaccctagaatccttattgtactttt 21945968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 3303299 - 3303334
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  3303299 acgattcttaaccctagaatccttattgtacttttt 3303334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 14676712 - 14676747
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  14676712 acgattcttaaccctagaatccttattgtacttttt 14676747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 21408502 - 21408537
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  21408502 acgattcttaaccctagaatccttattgtacttttt 21408537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 21802994 - 21803029
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  21802994 acgattcttaaccctagaatccttattgtacttttt 21803029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 21834965 - 21835000
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  21834965 acgattcttaaccctagaatccttattgtacttttt 21835000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 17007930 - 17007974
Alignment:
Q  4 cgatttttaaccctagaatcc-ttattgtacttttttcaagtaca 47  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||    
T  17007930 cgattcttaaccctagaatcccttattgtactttttgcaagtaca 17007974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 17541020 - 17540976
Alignment:
Q  4 cgatttttaaccctagaatcc-ttattgtacttttttcaagtaca 47  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||    
T  17541020 cgattcttaaccctagaatcccttattgtactttttgcaagtaca 17540976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31709045 - 31709081
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| |||||||||||||| |||||||||||||    
T  31709045 atacgattcttaaccctagaatctttattgtactttt 31709081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 28082343 - 28082228
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||   ||||||    
T  28082343 aaaacatgctcgtcatgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcatcgagcgttggacgtttataccaaacgtgttccac 28082244  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  28082243 catccttgtgtctctg 28082228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 31824731 - 31824838
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||  |||||||    
T  31824731 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatattctcccctcgtcgagcgttggacgtttataccgaacgtattccac 31824830  T
Q  225 cctccttg 232  Q
    ||||||||    
T  31824831 cctccttg 31824838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 22437016 - 22436901
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||| |||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  22437016 aaaacatgctcgtcacgttttcatcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 22436917  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  22436916 cctccttgtgtctctg 22436901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 34153388 - 34153503
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  34153388 aaaacatgatcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 34153487  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  34153488 cctccttgtgtctctg 34153503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 43889601 - 43889716
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||   ||||||    
T  43889601 aaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 43889700  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  43889701 cctccttgtgtctctg 43889716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 242518 - 242633
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||| ||||| |||||| |||||||||||||   ||||||    
T  242518 aaaacatgctcgtcacgttttcatcgttctttaactccacctaagtgaatgatgctctcccctcgtcgagtgttggacgtttataccgaacgtgttccac 242617  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  242618 cctccttgtgtctctg 242633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 33163646 - 33163761
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| |||||||||||||  |||||||    
T  33163646 aaaacatgctcgtcacattttcgtcgttctttaactccacccaagtgaatgttactctcccctcgttgagcgttggacgtttataccgaacgtattccac 33163745  T
Q  225 cctccttgtgtctctg 240  Q
    |||| ||| |||||||    
T  33163746 cctcattgcgtctctg 33163761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 47657457 - 47657572
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    ||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||||||||| || ||||||||||||||||||||||||||   ||||||    
T  47657457 aaaatatgctcgtcacgttttggtcgttcgttaattccatccaagtgaatgatactctcccatcgtcgagcgttggatgtttataccgaacgtgttccac 47657556  T
Q  225 cctccttgtgtctctg 240  Q
    || |||||||||||||    
T  47657557 ccaccttgtgtctctg 47657572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 51027869 - 51027984
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||   ||||||    
T  51027869 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctccccttgtcgagcgttggacgtttataccgaacgtgttccac 51027968  T
Q  225 cctccttgtgtctctg 240  Q
     |||||||||||||||    
T  51027969 tctccttgtgtctctg 51027984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 51428294 - 51428409
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| | |||||||| | |||||||||||||   ||||||    
T  51428294 aaaacatgctcgtcacgttttcgtcgttcgttaactccacacaagtgaatgatactctcccctcgttgagcgttgaacgtttataccgaacgtgttccac 51428393  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  51428394 cctccttgtgtctctg 51428409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 14330796 - 14330910
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| ||||| |||||| ||||||||||||    ||||||    
T  14330796 aaaacatgctcgtcacgttttcgtcgttctttaattccacccaagtgaatgataccctcccctcgtcgagtgttggacgtttataccgaaagtgttccac 14330895  T
Q  225 cctccttgtgtctct 239  Q
    |||||||||||||||    
T  14330896 cctccttgtgtctct 14330910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 25762703 - 25762590
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    ||||||    
T  25762703 aaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaatgtgttccac 25762604  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  25762603 cctccttgtgtctc 25762590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 957554 - 957670
Alignment:
Q  122 cctaaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattc 221  Q
    ||||||| |||||||||| ||||||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||  ||||||| ||||  ||||    
T  957554 cctaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatacgctcccctcgtcgagcgttggacatttatacagaacatattc 957653  T
Q  222 caccctccttgtgtctc 238  Q
    |||||||||| ||||||    
T  957654 caccctccttatgtctc 957670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 21017279 - 21017394
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||    
T  21017279 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccac 21017378  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  21017379 catccttgtgtctctg 21017394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 26591787 - 26591902
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||||||| |||||| ||||| ||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||| |||||   ||||||    
T  26591787 aaaatatgttcgtcacgtttttgtcgttcgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttatatcgaacgtgttccac 26591886  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  26591887 cctccttgtgtctctg 26591902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 37866511 - 37866396
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| |||||||||| || |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    ||||||    
T  37866511 aaaacatgctcatcacgttttcgtcgctcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttataccgaatgtgttccac 37866412  T
Q  225 cctccttgtgtctctg 240  Q
    ||| ||||||||||||    
T  37866411 ccttcttgtgtctctg 37866396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 40353875 - 40353990
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||    
T  40353875 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccac 40353974  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  40353975 catccttgtgtctctg 40353990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 46816625 - 46816740
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||| || ||||| ||||  |||||||    
T  46816625 aaaacatgctcgtcacgtttttgtcgttctttaactccacccaagtgaatgataccctcccctcgtcgagcattggacgtgtatactgaacgtattccac 46816724  T
Q  225 cctccttgtgtctctg 240  Q
    |||||||| |||||||    
T  46816725 cctccttgcgtctctg 46816740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 49064084 - 49063969
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||||||||| || |||||||| ||||| |||||| |||||||||||||   ||||||    
T  49064084 aaaacatgctcgtcacgttttcgtcgttctttaattccacccaagtgaatgacaccctcccctcgtcgagtgttggacgtttataccgaacgtgttccac 49063985  T
Q  225 cctccttgtgtctctg 240  Q
     |||||||||||||||    
T  49063984 tctccttgtgtctctg 49063969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 49792038 - 49792153
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||| ||| |||| ||||||||||||||| |||||||||| || |||||||||||| |||||||||||||   ||||||    
T  49792038 aaaacatgctcgtcacgttttcgtcattcgttaattccacccaagtgaataatactctcccatcgtcgagcgttggacgtttataccgaacgtgttccac 49792137  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  49792138 cctccttgtgtctctg 49792153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 17917305 - 17917229
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  17917305 acgctcctaccaaacgttgattgtatctccccaaattggtttgccaacatctcatctattttttgccaacaagtacc 17917229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 44560282 - 44560397
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||| |||| ||||||||||||| |||| |||| |||||||||||||| ||||||||| |||||||||||| |||||||| ||||   ||||||    
T  44560282 aaaacatgcttgtcacgttttcgtcgttcgttaattccatccaagtgaatgatattctcccctcgtcgagcgttggacgtttatactgaacgtgttccac 44560381  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  44560382 cctccttgtgtctctg 44560397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 2773114 - 2773000
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||| ||||||| |||||   ||||||    
T  2773114 aaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtagagcgttggacgtttataacgaacgtgttccac 2773015  T
Q  225 cctccttgtgtctct 239  Q
    | |||||||||||||    
T  2773014 catccttgtgtctct 2773000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 20778971 - 20779081
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| | |||||||||| |||||||||||||   ||||||    
T  20778971 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaaatgaatgatactctcccctcgtagagcgttggacgtttataccgaacgtgttccac 20779070  T
Q  225 cctccttgtgt 235  Q
    ||| |||||||    
T  20779071 ccttcttgtgt 20779081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 21711635 - 21711549
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttatacc 211  Q
    |||| |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  21711635 aaaacatgctcgtcacgttttcgtcgttctttaattccacccaagtgaatgataccctcccctcgtcgagcgttagatgtttatacc 21711549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 55796848 - 55796738
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||    
T  55796848 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccac 55796749  T
Q  225 cctccttgtgt 235  Q
    | |||||||||    
T  55796748 catccttgtgt 55796738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 17497639 - 17497566
Alignment:
Q  50 ctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  17497639 ctcctaccaaacgatgattgtatctccccaaattggtttgccaacatctcatctattttttcccaacaagtacc 17497566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 42886366 - 42886255
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgata---ctctcccctcatcgagcgttggatgtttataccgaactaattccaccc 226  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||   |||||||||| |||||||||||| ||||||| |||||   ||||||||    
T  42886366 atgctcgtcatgttttcgtcgttggttaattccacccaagtgaatgatagtactctcccctcgtcgagcgttggaagtttataacgaacgtgttccaccc 42886267  T
Q  227 tccttgtgtctc 238  Q
    ||||||||||||    
T  42886266 tccttgtgtctc 42886255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 11288400 - 11288288
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||| | ||||||| ||||||||| |||| ||||||| |||||||| ||||  |||||||    
T  11288400 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaactaaatgatattctcccctcgtcgaccgttggacgtttatacggaacgtattccac 11288301  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  11288300 cctccttgtgtct 11288288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 20901770 - 20901882
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||| ||| |||| ||||||| |||||||||||||   ||| ||    
T  20901770 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattctccactcgtcgaacgttggacgtttataccgaacgtgttctac 20901869  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  20901870 cctccttgtgtct 20901882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 1226264 - 1226150
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  ||||||||||||||||| ||||| |||||||||||||| |||||||| |||||||||||| ||||||| | |||  |||||||    
T  1226264 aaaacatgctcgtcacattttcgtcgttctttaattccacacaagtgaatgataccctcccctcgtcgagcgttggacgtttatagcaaacgtattccac 1226165  T
Q  225 cctccttgtgtctctg 240  Q
    ||||| ||||||||||    
T  1226164 cctcc-tgtgtctctg 1226150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 21169556 - 21169441
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||  || ||| |||| | |||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||||   ||||||    
T  21169556 aaaacatgctcgtcgcgtattcatcgtccgttaattcgacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatatcgaacgtgttccac 21169457  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  21169456 cctccttgtgtctctg 21169441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 32938009 - 32938116
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcc 229  Q
    |||||||||| ||||||||||||| |||| ||||||||| ||||||||| |||||| || ||||| |||||| |||||||||||||   |||||||||||    
T  32938009 atgctcgtcacgttttcgtcgttcgttaattccacccaactgaatgatattctcccttcgtcgagtgttggacgtttataccgaacgtgttccaccctcc 32938108  T
Q  230 ttgtgtct 237  Q
    ||||||||    
T  32938109 ttgtgtct 32938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 36776626 - 36776733
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcc 229  Q
    |||||||||| ||||||||||||| |||| || |||||||||||| ||||||||||||| ||||||||||||  |||||||| |||   |||||||||||    
T  36776626 atgctcgtcacgttttcgtcgttcgttaattctacccaagtgaataatactctcccctcgtcgagcgttggacatttatacctaacgtgttccaccctcc 36776725  T
Q  230 ttgtgtct 237  Q
    ||||||||    
T  36776726 ttgtgtct 36776733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 46516376 - 46516451
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtac 122  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||||||    
T  46516376 acgctcctaccaaacgatgattgtatctccccgaattggtttgccaatatctcatctattttttgccaacaagtac 46516451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 49423865 - 49423972
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcc 229  Q
    |||||||||| ||||||||||||| |||| |||| |||||||||||||| ||||||||| ||||||| ||||  ||||||||||||   |||||||||||    
T  49423865 atgctcgtcacgttttcgtcgttcgttaattccatccaagtgaatgataatctcccctcgtcgagcgctggacatttataccgaacatgttccaccctcc 49423964  T
Q  230 ttgtgtct 237  Q
    ||||||||    
T  49423965 ttgtgtct 49423972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 49817746 - 49817860
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||| | ||||||||||||| |||| ||||||||| |||||| |||||||||||| | |||||||||| |||||||| ||||   ||||||    
T  49817746 aaaacatgctcgtaacgttttcgtcgttcgttaattccacccaactgaatgttactctcccctcgtagagcgttggacgtttatactgaacgtgttccac 49817845  T
Q  225 cctccttgtgtctct 239  Q
    |||||||||||||||    
T  49817846 cctccttgtgtctct 49817860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 3393409 - 3393296
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| ||||||||||||| |||| ||||||||| | ||||||| |||||| || |||||||||||| ||||||| |||||  |||||||    
T  3393409 aaaacatgctcctcacgttttcgtcgttcgttaattccacccaactaaatgataatctcccatcctcgagcgttggacgtttatatcgaacgtattccac 3393310  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  3393309 cctccttgtgtctc 3393296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 9489784 - 9489671
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||||||||||  |||| ||||||||||||||||| ||||||||||| |||||||||||| |||||||| |||    ||||||    
T  9489784 aaaacatgctcgtcacattttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttatactgaaggtgttccac 9489685  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  9489684 cctccttgtgtctc 9489671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 10312377 - 10312264
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||| | ||||||| |||||| || ||||| |||| |||||||||||||||  |||||||    
T  10312377 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaactaaatgatattctcccatcgtcgagtgttgtatgtttataccgaacatattccac 10312278  T
Q  225 cctccttgtgtctc 238  Q
     |||||||||||||    
T  10312277 actccttgtgtctc 10312264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 32717409 - 32717336
Alignment:
Q  50 ctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  32717409 ctcctgccaaacgatgattgtatctccccaaattggtttgccaacatctcatctattttttgcgaacaagtacc 32717336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 6282425 - 6282537
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||| ||| |||| |||||||||||||||||||||||| |||  ||||| |||||| |||||||||||||   ||||||    
T  6282425 aaaacatgctcgtcacgttttcgtcattcgttaattccacccaagtgaatgatactctctccttgtcgagtgttggacgtttataccgaacgtgttccac 6282524  T
Q  225 cctccttgtgtct 237  Q
    ||||||| |||||    
T  6282525 cctccttctgtct 6282537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 6177417 - 6177532
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  6177417 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 6177516  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  6177517 catccttgtgtctctg 6177532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 34529898 - 34530013
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||||||||||  |||| ||||||||||||||||| ||||||||||  |||||||||||| ||||||||||||    ||||||    
T  34529898 aaaaaatgctcgtcacattttcgtcgtttgttaattccacccaagtgaatgaaactctccccttgtcgagcgttggacgtttataccgaaggtgttccac 34529997  T
Q  225 cctccttgtgtctctg 240  Q
    ||| ||||||||||||    
T  34529998 ccttcttgtgtctctg 34530013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 41794664 - 41794779
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  41794664 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 41794763  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  41794764 catccttgtgtctctg 41794779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 56139015 - 56138900
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  56139015 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 56138916  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  56138915 catccttgtgtctctg 56138900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 1591952 - 1591876
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||| ||||||||||||    
T  1591952 acgctcctaccaaacgatgattgtatctccctaaattagtttgccaacaactcatctattttttaccaacaagtacc 1591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 39589034 - 39588922
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  |||||||||||  |||| ||||||||||||||||| ||||||||| | |||||||||||| |||||||| |||    ||||||    
T  39589034 aaaacatgctcgtcacattttcgtcgtttgttaattccacccaagtgaatgaaactctccccccgtcgagcgttggacgtttatactgaaggtgttccac 39588935  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  39588934 cctccttgtgtct 39588922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 45939630 - 45939518
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  || ||||||||| |||| ||||||||||||||||||| ||||| ||| |||||||||| | ||||||| |||||   ||||||    
T  45939630 aaaacatgctcgtcacattatcgtcgttcgttaattccacccaagtgaatgataatctcctctcgtcgagcgttgaacgtttatatcgaacgtgttccac 45939531  T
Q  225 cctccttgtgtct 237  Q
    |||||||||||||    
T  45939530 cctccttgtgtct 45939518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 49094850 - 49094735
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||| ||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  49094850 aaaacatggtcgtcacgtttttgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 49094751  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  49094750 catccttgtgtctctg 49094735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 27759432 - 27759374
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctc 183  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27759432 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctc 27759374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 1042854 - 1042769
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttatac 210  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||| || ||||||||| ||||||||    
T  1042854 aaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgaaactctcccctcgtctagcgttggacgtttatac 1042769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 17211371 - 17211258
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| |||||  |||||| |||| || || ||| ||||||||| ||| ||||| |||| ||||||| |||||||||||||  |||||||    
T  17211371 aaaacatgctcgtcacgtttttatcgttcgttaattcgactcaaatgaatgatattcttccctcgtcgaacgttggacgtttataccgaacgtattccac 17211272  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  17211271 cctccttgtgtctc 17211258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 18412700 - 18412587
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| ||| ||||||||| |||| |||||| || ||||||||| ||| || || |||||||||||| |||||||||||||  |||||||    
T  18412700 aaaacatgctcctcacgttatcgtcgttcattaattccaccgaactgaatgatattcttccatcgtcgagcgttggacgtttataccgaacgtattccac 18412601  T
Q  225 cctccttgtgtctc 238  Q
    ||| ||||||||||    
T  18412600 ccttcttgtgtctc 18412587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 24606852 - 24606744
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcc 229  Q
    |||||||||| ||||||||||||| |||| || |||||| ||||| ||||||||| ||  ||||||||||||  |||||| |||||   |||||||||||    
T  24606852 atgctcgtcacgttttcgtcgttcgttaattctacccaactgaataatactctccgcttgtcgagcgttggacatttatatcgaacgtgttccaccctcc 24606753  T
Q  230 ttgtgtctc 238  Q
    |||||||||    
T  24606752 ttgtgtctc 24606744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 4618674 - 4618595
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacctaaa 127  Q
    |||||||||||||||||||||| |||||||||||||||||    ||||||||| |||||||| ||| ||||||||||||||    
T  4618674 acgctcctaccaaacgatgattctatctccccaaattggtacc-caacatctcatctattttatgctaacaagtacctaaa 4618595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 4785540 - 4785639
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctctg 240  Q
    ||||| ||||||| |||| |||||| ||||||||||| |||||||||| || || ||| || ||||||||||||    ||||||||||||||||||||||    
T  4785540 gtttttgtcgttcgttaattccaccaaagtgaatgatgctctcccctcgtcaagggtttgacgtttataccgaatgtgttccaccctccttgtgtctctg 4785639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22751861 - 22751907
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttttcaagtaca 47  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  22751861 atacgattcttaaccctagaatccttattgtacttttttcaagtaca 22751907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22763139 - 22763185
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttttcaagtaca 47  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  22763139 atacgattcttaaccctagaatccttattgtacttttttcaagtaca 22763185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 21412647 - 21412740
Alignment:
Q  145 tcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctc 238  Q
    ||||||||| |||| |||| |||| | ||||||| ||||||||| | || | ||||| |||||||||| ||  |||||||||||||||||||||    
T  21412647 tcgtcgttcgttaattccatccaactaaatgatattctcccctcgttgaacattggacgtttataccggacgtattccaccctccttgtgtctc 21412740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 13850814 - 13850739
Alignment:
Q  165 ccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctctg 240  Q
    |||| ||||||||| |||||| || || | ||||||| ||||||||| |||  |||||||||||||||||||||||    
T  13850814 ccaactgaatgatattctcccatcgtcaaacgttggacgtttataccaaacgtattccaccctccttgtgtctctg 13850739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 13866348 - 13866253
Alignment:
Q  145 tcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtctctg 240  Q
    ||||||||  |||| |||| |||| ||||||||| |||||| || || |  |||||| ||||||||| |||  |||||||||||||||||||||||    
T  13866348 tcgtcgtttgttaattccatccaactgaatgatattctcccatcgtcaaatgttggacgtttataccaaacgcattccaccctccttgtgtctctg 13866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27789191 - 27789238
Alignment:
Q  1 atacgatttttaaccctagaatcc-ttattgtacttttttcaagtaca 47  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  27789191 atacgattcttaaccctagaatcccttattgtactttttgcaagtaca 27789238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30953307 - 30953354
Alignment:
Q  1 atacgatttttaaccctagaatcc-ttattgtacttttttcaagtaca 47  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  30953307 atacgattcttaaccctagaatcccttattgtactttttgcaagtaca 30953354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 10755107 - 10755143
Alignment:
Q  3 acgatttttaaccctagaatccttattgtactttttt 39  Q
    |||||| |||||||||||||| |||||||||||||||    
T  10755107 acgattcttaaccctagaatctttattgtactttttt 10755143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 10968876 - 10968912
Alignment:
Q  3 acgatttttaaccctagaatccttattgtactttttt 39  Q
    |||||| |||||||||||||| |||||||||||||||    
T  10968876 acgattcttaaccctagaatctttattgtactttttt 10968912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 2374 - 2261
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||| |||||||||||||   ||||||    
T  2374 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgttgagcgttggacgtttataccgaacgtgttccac 2275  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  2274 cctccttgtgtctc 2261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 34803001 - 34803111
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcc 229  Q
    |||||| ||| ||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||   |||||||||||    
T  34803001 atgctcatcacgttttcgtcgttcgttaattccacccaagtcaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctcc 34803100  T
Q  230 ttgtgtctctg 240  Q
    |||||||||||    
T  34803101 ttgtgtctctg 34803111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 14115141 - 14115033
Alignment:
Q  130 atgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctcc 229  Q
    |||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||   || ||||||||    
T  14115141 atgctcgtcacgttttcgtcgttctttacttccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttatactgaacgttttgcaccctcc 14115042  T
Q  230 ttgtgtctc 238  Q
    |||||||||    
T  14115041 ttgtgtctc 14115033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 125 - 215
Target Start/End: Original strand, 35058835 - 35058925
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaac 215  Q
    |||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  35058835 aaaacatgctcgtaacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataacgaac 35058925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 801274 - 801160
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||||||||||| |||||||||||||| || |||||||| |||||| ||||| ||||||||| |||  |||||||    
T  801274 aaaacatggtcgtcacgttttcgtcgttctttaactctacccaagtgaatgacac-ctcccctcgtcgagctttggacgtttataccaaacgtattccac 801176  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  801175 cctccttgtgtctctg 801160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 12396885 - 12396770
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| ||| || |||||||||||||    |||||    
T  12396885 aaaacatgctcgtcatgttttcgtcgttcgttaattccacccaattgaatgatactctcccctcgtcgagtgttagacgtttataccgaacgtgctccac 12396786  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||| ||||||||    
T  12396785 cctccttatgtctctg 12396770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 13402642 - 13402527
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| |||| ||||| ||||||||||| ||||||||||| ||||||||||||  ||||||| ||||   ||||||    
T  13402642 aaaacatgctcgtcacgttttcgtcgttcgttaattccactcaagtgaatgaaactctcccctcgtcgagcgttggacatttatacagaacgtgttccac 13402543  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  13402542 cctccttgtgtctctg 13402527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 29066662 - 29066547
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| ||||||||||||  |||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||    ||||||    
T  29066662 aaaacatgctcttcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccac 29066563  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  29066562 cctccttgtgtctctg 29066547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 29075675 - 29075560
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| ||||||||||||  |||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||    ||||||    
T  29075675 aaaacatgctcttcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccac 29075576  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  29075575 cctccttgtgtctctg 29075560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 32027728 - 32027843
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||| ||||  |||||| |||||||||||||   ||| ||    
T  32027728 aaaacatgctcgtcacgttttcgtcattcgttaattccacccaagtgaatgatactctcccctcgtcgaatgttggacgtttataccgaacgtgttcaac 32027827  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  32027828 cctccttgtgtctctg 32027843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 32037787 - 32037902
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||| ||||  |||||| |||||||||||||   ||| ||    
T  32037787 aaaacatgctcgtcacgttttcgtcattcgttaattccacccaagtgaatgatactctcccctcgtcgaatgttggacgtttataccgaacgtgttcaac 32037886  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  32037887 cctccttgtgtctctg 32037902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 22305889 - 22305793
Alignment:
Q  141 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtgtct 237  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||   ||||||| |||||||||||    
T  22305889 gttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtct 22305793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 27640289 - 27640174
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||||||| ||||||||| ||    ||||||    
T  27640289 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagcgttggacgtttataccaaatgtgttccac 27640190  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  27640189 catccttgtgtctctg 27640174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 29110647 - 29110531
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| ||||||||||||  |||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||    ||||||    
T  29110647 aaaacatgctcttcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccac 29110548  T
Q  225 cc-tccttgtgtctctg 240  Q
    || ||||||||||||||    
T  29110547 ccatccttgtgtctctg 29110531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 6205593 - 6205478
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||||||| ||    ||||||    
T  6205593 aaaacatggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccac 6205494  T
Q  225 cctccttgtgtctctg 240  Q
    | ||||||||||||||    
T  6205493 catccttgtgtctctg 6205478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 29108249 - 29108134
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| ||||||||||||  |||| ||||||||||||||||| ||||||||||| |||||||||||| |||||||||  |    ||||||    
T  29108249 aaaacatgctcttcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttataccacaggtgttccac 29108150  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  29108149 cctccttgtgtctctg 29108134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 11692560 - 11692446
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||  ||||| |||||| ||||||||| ||    ||||||    
T  11692560 aaaacatgttcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctccccttgtcgagtgttggacgtttataccaaatgtgttccac 11692461  T
Q  225 cctccttgtgtctct 239  Q
    | |||||||||||||    
T  11692460 catccttgtgtctct 11692446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 22865155 - 22865087
Alignment:
Q  59 aacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacctaaa 127  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||| ||| | ||||||||||||||||    
T  22865155 aacgatgattgtatctccccaacttggtttgccaacatctcatctagtttattccaacaagtacctaaa 22865087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 30257679 - 30257729
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatg 175  Q
    |||| |||||||||| |||||||||||||||||| ||||||||| ||||||    
T  30257679 aaaacatgctcgtcacgttttcgtcgttctttaattccacccaactgaatg 30257729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19573652 - 19573615
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||||| |||||||||||||||||||||||||||||    
T  19573652 atacgattcttaaccctagaatccttattgtacttttt 19573615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19011650 - 19011614
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  19011650 atacgattcttaaccctagaatccttattgtactttt 19011614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 8668221 - 8668256
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  8668221 acgattcttaaccctagaatccttattgtacttttt 8668256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 16688698 - 16688733
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  16688698 acgattcttaaccctagaatccttattgtacttttt 16688733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20090463 - 20090425
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttttt 39  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  20090463 atacgattctcaaccctagaatccttattgtactttttt 20090425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19577272 - 19577235
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  19577272 atacgattcttaaccctagaatctttattgtacttttt 19577235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23607007 - 23606970
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  23607007 atacgattcttaaccctagaatccttactgtacttttt 23606970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 26683967 - 26684044
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtcta-ttttttgccaacaagtacc 123  Q
    |||||||||||||| |||||||||||||| ||||| | | ||  ||| ||||| |||| |||||| ||||||||||||    
T  26683967 acgctcctaccaaatgatgattgtatctctccaaactcgattaccaatatctcatctattttttttccaacaagtacc 26684044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 4955 - 4879
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtctattttttgccaacaagtacc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  4955 acgctcctaccaaacgatgattgtatctccccaaattggtttgccaacatctcatctattttttgccaacaagtacc 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 1887 - 1783
Alignment:
Q  135 cgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccaccctccttgtg 234  Q
    ||||| ||||||||||||  |||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||    
T  1887 cgtcacgttttcgtcgtttgttaattccacccaaatgaatgatactctcccctcgtcgagcgttggatgtttataccgaaattgttccaccctccttgtg 1788  T
Q  235 tctct 239  Q
    |||||    
T  1787 tctct 1783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 18017 - 18123
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||||||||||   ||||||    
T  18017 aaaacatgctcatcacgttttcgtcgttctttaactccacccaagtgaatgatactct-ccctcgtcgagtgttggacgtttataccgaacgtgttccac 18115  T
Q  225 cctccttg 232  Q
    ||||||||    
T  18116 cctccttg 18123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 25012 - 24899
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| ||||||||||  ||||||| |||| |||| ||||||||| |||||| |||||||||||| |||||||||| | || ||||||||||  |||||||    
T  25012 aaaacatgctcgtcacattttcgttgttcgttaattccacccaactgaatgctactctcccctcctcgagcgttgtacgtctataccgaacgtattccac 24913  T
Q  225 cctccttgtgtctc 238  Q
    ||||||||||||||    
T  24912 cctccttgtgtctc 24899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 64082 - 63968
Alignment:
Q  125 aaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcatcgagcgttggatgtttataccgaactaattccac 224  Q
    |||| |||||||||| ||||||||||||| || | ||||| ||| ||||||||||||| ||||  ||||||||||||  ||||||||||||    |||||    
T  64082 aaaacatgctcgtcacgttttcgtcgttcattgattccactcaactgaatgatactct-cccttgtcgagcgttggacatttataccgaacgtgctccac 63984  T
Q  225 cctccttgtgtctctg 240  Q
    ||||||||||||||||    
T  63983 cctccttgtgtctctg 63968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 1964 - 2041
Alignment:
Q  47 acgctcctaccaaacgatgattgtatctccccaaattggtttgtcaacatctcgtcta-ttttttgccaacaagtacc 123  Q
    |||||||||||||| ||||| |||||||||||||||||| ||  ||||||||| |||| |||||| ||||||||||||    
T  1964 acgctcctaccaaatgatgactgtatctccccaaattggcttaccaacatctcatctattttttttccaacaagtacc 2041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10445 - 10396
Alignment:
Q  1 atacgatttttaaccctagaatcc-ttattgtacttttttcaagtacacg 49  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  10445 atacgattcttaaccctagaatcccttattgtactttttgcaagtacacg 10396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4385 - 4421
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  4385 atacgattcttaaccctagaatccttattgtactttt 4421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7694 - 7730
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  7694 atacgattcttaaccctagaatccttattgtactttt 7730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 13848 - 13812
Alignment:
Q  3 acgatttttaaccctagaatccttattgtactttttt 39  Q
    |||||| ||||||||||||||||||||||||||||||    
T  13848 acgattcttaaccctagaatccttattgtactttttt 13812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 10361 - 10326
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  10361 acgattcttaaccctagaatccttattgtacttttt 10326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25751 - 25703
Alignment:
Q  1 atacgatttttaaccctagaatc-cttattgtacttttttcaagtacac 48  Q
    |||||||| |||||||||||||| ||||||||||||||| |||||||||    
T  25751 atacgattcttaaccctagaatcacttattgtactttttgcaagtacac 25703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 194737 - 194773
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| ||||||||||||||||||||||||||||    
T  194737 atacgattcttaaccctagaatccttattgtactttt 194773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2269 - 2316
Alignment:
Q  1 atacgatttttaaccctagaatcc-ttattgtacttttttcaagtaca 47  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  2269 atacgattcttaaccctagaatcccttattgtactttttgcaagtaca 2316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 14970 - 14935
Alignment:
Q  3 acgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  14970 acgattcttaaccctagaatccttattgtacttttt 14935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37013 - 37060
Alignment:
Q  1 atacgatttttaaccctagaatcc-ttattgtacttttttcaagtaca 47  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  37013 atacgattcttaaccctagaatcccttattgtactttttgcaagtaca 37060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12997 - 12959
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttttt 39  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  12997 atacgattctcaaccctagaatccttattgtactttttt 12959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 1500 - 1466
Alignment:
Q  3 acgatttttaaccctagaatccttattgtactttt 37  Q
    |||||| ||||||||||||||||||||||||||||    
T  1500 acgattcttaaccctagaatccttattgtactttt 1466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 78818 - 78855
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtacttttt 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  78818 atacgattcttaaccctagaatccttactgtacttttt 78855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 44370 - 44338
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtac 33  Q
    |||||||| ||||||||||||||||||||||||    
T  44370 atacgattcttaaccctagaatccttattgtac 44338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 146820 - 146856
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  146820 atacgatatttatccctagaatccttattgtactttt 146856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 150027 - 150063
Alignment:
Q  1 atacgatttttaaccctagaatccttattgtactttt 37  Q
    |||||||| |||||| |||||||||||||||||||||    
T  150027 atacgattcttaaccatagaatccttattgtactttt 150063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 133452 - 133404
Alignment:
Q  1 atacgatttttaaccctagaatc-cttattgtacttttttcaagtacac 48  Q
    |||||||| |||||||||||||| | ||||||||||||| |||||||||    
T  133452 atacgattcttaaccctagaatcacctattgtactttttgcaagtacac 133404  T

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Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 137981 - 137933
Alignment:
Q  1 atacgatttttaaccctagaatc-cttattgtacttttttcaagtacac 48  Q
    |||||||| |||||||||||||| | ||||||||||||| |||||||||    
T  137981 atacgattcttaaccctagaatcacctattgtactttttgcaagtacac 137933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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