View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3706_low_11 (Length: 382)

Name: NF3706_low_11
Description: NF3706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3706_low_11
NF3706_low_11
[»] chr6 (42 HSPs)
chr6 (6-366)||(11192422-11192782)
chr6 (11-366)||(13021092-13021453)
chr6 (11-329)||(12988002-12988324)
chr6 (11-307)||(9839294-9839593)
chr6 (11-227)||(2846227-2846448)
chr6 (11-200)||(28848766-28848960)
chr6 (11-246)||(2379155-2379393)
chr6 (11-246)||(3596742-3596980)
chr6 (11-210)||(5738081-5738283)
chr6 (11-206)||(11402182-11402380)
chr6 (11-285)||(23007986-23008265)
chr6 (11-285)||(23780099-23780378)
chr6 (11-131)||(1125814-1125934)
chr6 (11-131)||(30655369-30655489)
chr6 (11-246)||(11247687-11247924)
chr6 (11-246)||(13005114-13005352)
chr6 (11-210)||(20185670-20185871)
chr6 (11-210)||(22150120-22150321)
chr6 (11-246)||(22561124-22561362)
chr6 (11-100)||(24371200-24371289)
chr6 (11-131)||(17106689-17106808)
chr6 (22-131)||(6513192-6513301)
chr6 (11-227)||(14281500-14281719)
chr6 (22-246)||(23384713-23384939)
chr6 (11-210)||(26942432-26942633)
chr6 (11-244)||(9953889-9954124)
chr6 (11-87)||(5259862-5259938)
chr6 (176-313)||(24371311-24371449)
chr6 (11-131)||(28111845-28111964)
chr6 (11-114)||(10289898-10290000)
chr6 (274-315)||(13095610-13095651)
chr6 (11-97)||(7128225-7128310)
chr6 (275-315)||(14966418-14966458)
chr6 (264-315)||(34502530-34502580)
chr6 (281-315)||(3826710-3826744)
chr6 (11-97)||(28230520-28230605)
chr6 (12-97)||(19475929-19476013)
chr6 (182-246)||(4512575-4512639)
chr6 (11-87)||(11125819-11125894)
chr6 (279-315)||(14969902-14969938)
chr6 (182-246)||(18855986-18856050)
chr6 (182-246)||(26896220-26896284)
[»] chr5 (49 HSPs)
chr5 (11-366)||(21915045-21915406)
chr5 (19-319)||(31575347-31575654)
chr5 (11-244)||(41876727-41876963)
chr5 (11-227)||(18239475-18239695)
chr5 (11-243)||(22936901-22937136)
chr5 (11-243)||(42062845-42063080)
chr5 (11-210)||(26752698-26752900)
chr5 (11-244)||(34831688-34831923)
chr5 (11-319)||(7625026-7625340)
chr5 (36-246)||(31863663-31863876)
chr5 (11-246)||(26895565-26895802)
chr5 (11-240)||(4099484-4099715)
chr5 (13-246)||(18952619-18952854)
chr5 (19-246)||(21332641-21332870)
chr5 (19-227)||(21335678-21335888)
chr5 (19-131)||(2837235-2837347)
chr5 (19-227)||(41306507-41306717)
chr5 (11-130)||(14375888-14376006)
chr5 (11-244)||(40583173-40583408)
chr5 (19-210)||(22131161-22131355)
chr5 (11-115)||(43491679-43491783)
chr5 (264-315)||(2453470-2453521)
chr5 (11-114)||(20055698-20055800)
chr5 (11-94)||(30066266-30066348)
chr5 (11-77)||(32837941-32838007)
chr5 (264-315)||(19686357-19686409)
chr5 (264-315)||(19689740-19689792)
chr5 (33-96)||(18765756-18765819)
chr5 (11-97)||(12058605-12058690)
chr5 (11-97)||(12087882-12087967)
chr5 (11-97)||(17664476-17664561)
chr5 (138-200)||(18765647-18765709)
chr5 (11-97)||(34133096-34133181)
chr5 (11-97)||(34143327-34143412)
chr5 (274-308)||(40799815-40799849)
chr5 (278-315)||(3195283-3195320)
chr5 (11-131)||(33552046-33552164)
chr5 (11-131)||(39192252-39192371)
chr5 (11-97)||(563372-563458)
chr5 (11-97)||(26292715-26292800)
chr5 (281-315)||(30764430-30764464)
chr5 (274-315)||(26548278-26548319)
chr5 (274-315)||(26551837-26551878)
chr5 (274-315)||(28562252-28562293)
chr5 (274-315)||(28565820-28565861)
chr5 (11-60)||(28787471-28787520)
chr5 (182-246)||(12088055-12088119)
chr5 (11-131)||(14016217-14016337)
chr5 (182-246)||(26907416-26907480)
[»] chr1 (40 HSPs)
chr1 (11-366)||(7635570-7635930)
chr1 (33-366)||(16056640-16056980)
chr1 (11-246)||(27355648-27355887)
chr1 (33-226)||(13430938-13431136)
chr1 (33-245)||(16060929-16061146)
chr1 (72-366)||(16062051-16062353)
chr1 (11-243)||(21434438-21434675)
chr1 (17-235)||(27331748-27331962)
chr1 (33-245)||(16055528-16055745)
chr1 (11-227)||(34732340-34732559)
chr1 (54-315)||(34065048-34065318)
chr1 (11-246)||(49498458-49498695)
chr1 (11-244)||(45941341-45941577)
chr1 (13-246)||(28110983-28111219)
chr1 (11-242)||(1950420-1950653)
chr1 (11-242)||(23021888-23022122)
chr1 (11-244)||(21107254-21107489)
chr1 (11-131)||(6071032-6071152)
chr1 (11-131)||(21018546-21018665)
chr1 (11-210)||(20398778-20398980)
chr1 (11-129)||(49853159-49853276)
chr1 (264-322)||(29643102-29643160)
chr1 (182-319)||(27536416-27536556)
chr1 (11-319)||(37183749-37184062)
chr1 (11-319)||(45960630-45960943)
chr1 (58-227)||(11666981-11667153)
chr1 (11-115)||(2794153-2794256)
chr1 (182-322)||(3796708-3796851)
chr1 (11-131)||(41058381-41058500)
chr1 (138-322)||(30938444-30938629)
chr1 (246-322)||(27355186-27355262)
chr1 (283-366)||(13430163-13430246)
chr1 (11-131)||(31204763-31204883)
chr1 (182-246)||(42022739-42022803)
chr1 (11-62)||(11668173-11668224)
chr1 (297-366)||(16060513-16060581)
chr1 (13-97)||(3796939-3797022)
chr1 (264-308)||(50196844-50196888)
chr1 (294-322)||(27331641-27331669)
chr1 (11-95)||(29643336-29643419)
[»] chr3 (81 HSPs)
chr3 (13-366)||(22993525-22993882)
chr3 (11-357)||(18542559-18542912)
chr3 (11-245)||(17545864-17546102)
chr3 (11-209)||(3292943-3293146)
chr3 (11-246)||(7486579-7486817)
chr3 (11-244)||(2775490-2775726)
chr3 (11-244)||(2778733-2778969)
chr3 (11-244)||(45896389-45896625)
chr3 (11-243)||(18644719-18644954)
chr3 (11-246)||(32287271-32287509)
chr3 (14-244)||(25584688-25584921)
chr3 (11-242)||(10884866-10885099)
chr3 (36-243)||(18641723-18641933)
chr3 (11-315)||(282071-282377)
chr3 (36-131)||(54461048-54461143)
chr3 (11-244)||(16243882-16244117)
chr3 (11-244)||(29343824-29344060)
chr3 (11-243)||(52199922-52200156)
chr3 (19-243)||(35412526-35412753)
chr3 (19-131)||(538843-538955)
chr3 (11-131)||(43809588-43809708)
chr3 (37-319)||(47051530-47051818)
chr3 (13-131)||(49742985-49743103)
chr3 (11-128)||(10881489-10881605)
chr3 (11-243)||(19301456-19301690)
chr3 (11-227)||(43926844-43927062)
chr3 (19-246)||(2873581-2873810)
chr3 (11-210)||(16184671-16184873)
chr3 (11-246)||(24125508-24125745)
chr3 (11-246)||(24128785-24129022)
chr3 (11-246)||(53815837-53816074)
chr3 (37-243)||(19304640-19304848)
chr3 (11-246)||(28008019-28008255)
chr3 (11-115)||(3840525-3840629)
chr3 (11-131)||(23298681-23298801)
chr3 (5-137)||(28265880-28266011)
chr3 (5-243)||(55034807-55035052)
chr3 (11-253)||(8461428-8461672)
chr3 (11-244)||(20728597-20728832)
chr3 (7-285)||(22783604-22783889)
chr3 (7-285)||(22787968-22788253)
chr3 (19-227)||(30219972-30220186)
chr3 (19-220)||(31549188-31549392)
chr3 (11-246)||(6434726-6434963)
chr3 (11-131)||(9392743-9392862)
chr3 (11-115)||(17040104-17040207)
chr3 (11-131)||(30690745-30690864)
chr3 (11-131)||(35751449-35751569)
chr3 (11-115)||(54723750-54723854)
chr3 (11-205)||(10106588-10106784)
chr3 (11-319)||(50461421-50461734)
chr3 (14-243)||(55031947-55032183)
chr3 (11-97)||(32367229-32367314)
chr3 (5-115)||(41977018-41977127)
chr3 (274-315)||(2279507-2279548)
chr3 (274-315)||(10963594-10963635)
chr3 (274-315)||(10967103-10967144)
chr3 (11-115)||(27091903-27092007)
chr3 (263-319)||(47055192-47055248)
chr3 (264-310)||(54736095-54736142)
chr3 (11-97)||(12561334-12561419)
chr3 (11-97)||(22416934-22417019)
chr3 (274-315)||(10960087-10960128)
chr3 (11-96)||(52988414-52988498)
chr3 (11-95)||(15195404-15195487)
chr3 (21-65)||(27308154-27308198)
chr3 (11-62)||(27308720-27308771)
chr3 (274-308)||(25888366-25888400)
chr3 (278-308)||(30157926-30157956)
chr3 (19-97)||(46884958-46885035)
chr3 (37-131)||(47054960-47055054)
chr3 (11-97)||(54719980-54720065)
chr3 (274-315)||(2784306-2784347)
chr3 (36-97)||(11190560-11190621)
chr3 (181-246)||(28266098-28266163)
chr3 (282-315)||(44508934-44508967)
chr3 (264-315)||(4250575-4250627)
chr3 (182-246)||(6922702-6922766)
chr3 (264-315)||(18883401-18883453)
chr3 (182-246)||(23298563-23298627)
chr3 (182-246)||(37408863-37408927)
[»] chr4 (66 HSPs)
chr4 (19-366)||(37739600-37739953)
chr4 (19-322)||(22172255-22172565)
chr4 (11-225)||(53094430-53094648)
chr4 (11-245)||(8877462-8877700)
chr4 (11-319)||(34319802-34320116)
chr4 (33-227)||(33408297-33408494)
chr4 (11-319)||(44808840-44809154)
chr4 (11-130)||(40794925-40795044)
chr4 (33-200)||(5677416-5677586)
chr4 (14-246)||(24150598-24150833)
chr4 (13-246)||(48014027-48014249)
chr4 (11-246)||(40616769-40617007)
chr4 (11-319)||(15812021-15812336)
chr4 (11-244)||(27014186-27014422)
chr4 (19-319)||(15404967-15405272)
chr4 (11-319)||(56195450-56195763)
chr4 (11-131)||(5670500-5670620)
chr4 (11-131)||(5672818-5672938)
chr4 (11-246)||(39501571-39501809)
chr4 (11-210)||(40903080-40903282)
chr4 (5-319)||(33926889-33927209)
chr4 (11-244)||(52006494-52006729)
chr4 (11-243)||(18911422-18911656)
chr4 (11-115)||(34017876-34017980)
chr4 (11-253)||(3797762-3798006)
chr4 (284-362)||(48013232-48013311)
chr4 (11-319)||(56198776-56199090)
chr4 (11-131)||(46955557-46955677)
chr4 (11-246)||(52530896-52531134)
chr4 (11-114)||(33493791-33493894)
chr4 (11-244)||(19820651-19820886)
chr4 (11-243)||(12238188-12238423)
chr4 (11-131)||(38283568-38283687)
chr4 (11-131)||(44164706-44164825)
chr4 (11-119)||(48415620-48415728)
chr4 (11-131)||(19859601-19859720)
chr4 (11-131)||(24044220-24044339)
chr4 (11-131)||(27677134-27677253)
chr4 (11-242)||(37103181-37103414)
chr4 (11-193)||(8874774-8874960)
chr4 (13-131)||(5681353-5681470)
chr4 (11-244)||(15432002-15432237)
chr4 (11-131)||(48637428-48637548)
chr4 (11-131)||(3719047-3719166)
chr4 (11-131)||(15429935-15430054)
chr4 (19-131)||(15446815-15446926)
chr4 (11-97)||(27679338-27679423)
chr4 (264-308)||(10386121-10386165)
chr4 (19-131)||(12782836-12782947)
chr4 (19-131)||(15164124-15164236)
chr4 (11-131)||(19864592-19864711)
chr4 (264-315)||(19929070-19929121)
chr4 (11-97)||(18673195-18673280)
chr4 (22-130)||(49270617-49270722)
chr4 (274-315)||(17670499-17670540)
chr4 (274-315)||(18859965-18860006)
chr4 (11-112)||(29324748-29324849)
chr4 (11-131)||(15436549-15436668)
chr4 (11-87)||(19827413-19827488)
chr4 (264-308)||(10248002-10248047)
chr4 (182-246)||(39498406-39498470)
chr4 (11-97)||(35509888-35509973)
chr4 (11-96)||(21419712-21419796)
chr4 (36-97)||(30392517-30392577)
chr4 (171-307)||(33493577-33493712)
chr4 (182-246)||(34017742-34017806)
[»] chr2 (46 HSPs)
chr2 (33-322)||(34682628-34682920)
chr2 (11-319)||(31427427-31427741)
chr2 (19-319)||(45457075-45457381)
chr2 (11-210)||(24235001-24235203)
chr2 (13-285)||(5105634-5105911)
chr2 (11-308)||(36808339-36808641)
chr2 (11-244)||(25959652-25959888)
chr2 (11-244)||(31585904-31586140)
chr2 (11-227)||(30274749-30274968)
chr2 (11-246)||(9185386-9185624)
chr2 (11-131)||(11347975-11348095)
chr2 (11-131)||(24238273-24238393)
chr2 (11-246)||(8888542-8888779)
chr2 (11-246)||(9188614-9188852)
chr2 (11-246)||(22020973-22021211)
chr2 (11-131)||(25139011-25139131)
chr2 (11-246)||(37279638-37279876)
chr2 (11-133)||(6826678-6826799)
chr2 (19-200)||(35521367-35521553)
chr2 (11-244)||(42368675-42368910)
chr2 (11-115)||(43207985-43208089)
chr2 (11-206)||(45493158-45493355)
chr2 (11-206)||(45500900-45501097)
chr2 (13-243)||(26365841-26366074)
chr2 (19-130)||(27266702-27266813)
chr2 (11-285)||(25820767-25821045)
chr2 (11-125)||(43723606-43723719)
chr2 (11-319)||(45453779-45454093)
chr2 (11-244)||(40781378-40781613)
chr2 (11-227)||(13971875-13972093)
chr2 (18-88)||(30926449-30926519)
chr2 (11-319)||(33310572-33310885)
chr2 (11-131)||(25870690-25870809)
chr2 (11-115)||(29440401-29440504)
chr2 (11-97)||(5666424-5666509)
chr2 (11-97)||(25874081-25874166)
chr2 (264-315)||(4578017-4578069)
chr2 (11-131)||(38015424-38015544)
chr2 (11-97)||(16179033-16179118)
chr2 (278-315)||(11056531-11056568)
chr2 (182-213)||(17874582-17874613)
chr2 (19-97)||(1386536-1386613)
chr2 (278-308)||(13518493-13518523)
chr2 (182-246)||(12219875-12219939)
chr2 (182-246)||(16790719-16790783)
chr2 (13-93)||(37937337-37937416)
[»] scaffold0233 (1 HSPs)
scaffold0233 (33-334)||(9883-10191)
[»] chr7 (48 HSPs)
chr7 (22-307)||(5796473-5796764)
chr7 (11-253)||(18562490-18562737)
chr7 (11-319)||(16165659-16165973)
chr7 (11-285)||(48645385-48645663)
chr7 (11-253)||(13809476-13809721)
chr7 (11-246)||(23224871-23225109)
chr7 (33-246)||(5242116-5242334)
chr7 (11-131)||(2441362-2441482)
chr7 (11-131)||(8276896-8277016)
chr7 (19-244)||(20594182-20594409)
chr7 (11-131)||(13449860-13449980)
chr7 (19-227)||(7227446-7227657)
chr7 (11-227)||(17730725-17730943)
chr7 (11-131)||(4546780-4546899)
chr7 (11-246)||(45287035-45287272)
chr7 (36-246)||(45290446-45290658)
chr7 (13-115)||(26557412-26557513)
chr7 (11-131)||(4596093-4596212)
chr7 (11-131)||(13842551-13842670)
chr7 (19-97)||(11398143-11398221)
chr7 (182-317)||(11397941-11398079)
chr7 (11-131)||(6603369-6603489)
chr7 (12-115)||(9271565-9271667)
chr7 (11-246)||(37415389-37415628)
chr7 (11-97)||(26136246-26136331)
chr7 (274-315)||(5826599-5826640)
chr7 (274-315)||(11825246-11825287)
chr7 (37-115)||(4542734-4542811)
chr7 (11-97)||(9132878-9132963)
chr7 (11-97)||(26144626-26144711)
chr7 (11-97)||(37166265-37166350)
chr7 (264-308)||(26153340-26153385)
chr7 (11-131)||(9864810-9864930)
chr7 (182-246)||(10469228-10469292)
chr7 (11-87)||(37423085-37423160)
chr7 (19-118)||(24918113-24918212)
chr7 (146-200)||(2090656-2090710)
chr7 (11-97)||(3068095-3068180)
chr7 (11-97)||(10469055-10469140)
chr7 (316-366)||(18560054-18560104)
chr7 (34-95)||(2090539-2090600)
chr7 (11-60)||(4695435-4695484)
chr7 (278-315)||(8398021-8398058)
chr7 (201-254)||(18560169-18560222)
chr7 (264-315)||(8258074-8258126)
chr7 (182-246)||(10345279-10345343)
chr7 (11-103)||(20080830-20080921)
chr7 (182-246)||(26144474-26144538)
[»] scaffold1208 (1 HSPs)
scaffold1208 (11-230)||(108-330)
[»] chr8 (37 HSPs)
chr8 (6-253)||(4868168-4868419)
chr8 (11-242)||(18721246-18721480)
chr8 (11-210)||(25591476-25591678)
chr8 (11-322)||(45155150-45155468)
chr8 (11-319)||(36710522-36710835)
chr8 (11-131)||(22174002-22174122)
chr8 (11-209)||(25594655-25594856)
chr8 (182-319)||(14589506-14589646)
chr8 (11-210)||(21279766-21279967)
chr8 (11-131)||(43681949-43682069)
chr8 (11-114)||(38248495-38248597)
chr8 (19-131)||(14421673-14421785)
chr8 (13-227)||(25231003-25231220)
chr8 (7-285)||(5613638-5613923)
chr8 (11-129)||(23643740-23643858)
chr8 (34-227)||(30784862-30785059)
chr8 (19-131)||(5980392-5980503)
chr8 (11-131)||(12516532-12516652)
chr8 (11-131)||(12582929-12583048)
chr8 (11-131)||(18824473-18824593)
chr8 (11-246)||(16953697-16953935)
chr8 (11-131)||(18825966-18826086)
chr8 (182-244)||(8911743-8911805)
chr8 (13-131)||(17930904-17931021)
chr8 (264-315)||(30645661-30645713)
chr8 (264-315)||(31981536-31981588)
chr8 (264-319)||(33883234-33883289)
chr8 (274-315)||(5964443-5964484)
chr8 (274-307)||(20262742-20262775)
chr8 (274-307)||(21049372-21049405)
chr8 (19-246)||(10498175-10498404)
chr8 (11-131)||(13196778-13196897)
chr8 (277-315)||(14188361-14188399)
chr8 (11-97)||(23619477-23619562)
chr8 (11-97)||(31284595-31284680)
chr8 (264-308)||(31986463-31986508)
chr8 (182-246)||(23619325-23619389)
[»] scaffold0034 (1 HSPs)
scaffold0034 (12-308)||(48302-48601)
[»] scaffold1063 (1 HSPs)
scaffold1063 (11-131)||(2418-2538)
[»] scaffold0250 (1 HSPs)
scaffold0250 (11-313)||(19319-19627)
[»] scaffold0381 (1 HSPs)
scaffold0381 (11-244)||(5361-5597)
[»] scaffold0045 (1 HSPs)
scaffold0045 (11-319)||(89693-90007)
[»] scaffold0412 (1 HSPs)
scaffold0412 (11-227)||(54-273)
[»] scaffold0427 (1 HSPs)
scaffold0427 (11-246)||(3749-3987)
[»] scaffold0015 (1 HSPs)
scaffold0015 (11-244)||(198071-198306)
[»] scaffold0520 (2 HSPs)
scaffold0520 (11-131)||(8298-8417)
scaffold0520 (11-131)||(1627-1746)
[»] scaffold0334 (1 HSPs)
scaffold0334 (11-131)||(19272-19392)
[»] scaffold0035 (2 HSPs)
scaffold0035 (11-227)||(62441-62659)
scaffold0035 (11-103)||(63783-63874)
[»] scaffold0757 (1 HSPs)
scaffold0757 (11-131)||(5276-5395)
[»] scaffold0962 (1 HSPs)
scaffold0962 (12-115)||(3377-3480)
[»] scaffold0080 (1 HSPs)
scaffold0080 (11-244)||(27033-27268)
[»] scaffold0005 (1 HSPs)
scaffold0005 (13-227)||(292949-293165)
[»] scaffold0002 (1 HSPs)
scaffold0002 (11-319)||(118333-118644)
[»] scaffold0270 (1 HSPs)
scaffold0270 (11-131)||(142-262)
[»] scaffold0690 (1 HSPs)
scaffold0690 (264-319)||(7596-7651)
[»] scaffold1755 (1 HSPs)
scaffold1755 (11-131)||(45-164)
[»] scaffold0009 (1 HSPs)
scaffold0009 (36-230)||(241449-241645)
[»] scaffold0066 (1 HSPs)
scaffold0066 (19-87)||(57712-57780)
[»] scaffold0014 (2 HSPs)
scaffold0014 (264-315)||(223895-223947)
scaffold0014 (264-308)||(228821-228866)
[»] scaffold0007 (1 HSPs)
scaffold0007 (11-131)||(248442-248561)
[»] scaffold1809 (1 HSPs)
scaffold1809 (22-131)||(1-109)
[»] scaffold0214 (3 HSPs)
scaffold0214 (264-308)||(13793-13838)
scaffold0214 (264-308)||(20243-20288)
scaffold0214 (264-308)||(27809-27854)
[»] scaffold0450 (1 HSPs)
scaffold0450 (11-97)||(14163-14248)
[»] scaffold0038 (1 HSPs)
scaffold0038 (11-97)||(31018-31103)
[»] scaffold1785 (1 HSPs)
scaffold1785 (11-103)||(1173-1264)
[»] scaffold0807 (1 HSPs)
scaffold0807 (11-87)||(2196-2271)
[»] scaffold0321 (1 HSPs)
scaffold0321 (182-246)||(2966-3030)


Alignment Details
Target: chr6 (Bit Score: 285; Significance: 1e-160; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 6 - 366
Target Start/End: Complemental strand, 11192782 - 11192422
Alignment:
Q  6 attattctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagt 105  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  11192782 attagtctaggattggataatcgtttatttgtgatattaggttaacgttcttaaaaccttcaaagaatattagatcacctaaggaattagggactgtagt 11192683  T
Q  106 atgagaagagagtcttaagtcaagggttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11192682 ctgagaagagagtcttaagtcaagggttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcattgtaccaattagg 11192583  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaacaaccttattttatgttatttactttttatgcacacaaacctactgc 305  Q
    ||| ||||||||||| |||||| ||| ||  ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||    
T  11192582 ggacctcagaggattcgaaagacctaatcatatctctctctatcttttctaaacaactttattttatgttatttactttttatgcacacatacctattgc 11192483  T
Q  306 ctcgggcactaaaataaactttactcatcttatttcataacgcaattgtttacttgagatt 366  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11192482 ctcgggcactaaaataaactttactcatcttatttcataatgcaattgtttacttgagatt 11192422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 366
Target Start/End: Complemental strand, 13021453 - 13021092
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  |||||||||||||||||| |||||| |||  ||| |||||||||||||||| ||| || |||||||||||| | ||||    
T  13021453 tctaggaatggataatcgtttatttgtgatattaggttaatgttcttcaaatcttctaagaatattagatcacttaaggagttagggactataatctgag 13021354  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13021353 aagagggtcctaagtcaagggattgattagggctattttagttaatcatcgtaaaactagagaaatattcatgagaaataggtgcagtgtaccaattagg 13021254  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaacaaccttattttatgttatttactttttatgc-acacaaacctactg 304  Q
    |||||| ||||||||  ||||| ||| ||| |||||||||||| ||||||||||||| ||||||| || ||||||||| |||||| | |||||||||||     
T  13021253 ggaacttagaggattcaaaagacctactctcatctctctctatattttataaacaactttattttctgctatttacttgttatgcaaaacaaacctacta 13021154  T
Q  305 cctcgggcactaaaataaactttactcatcttatttcataacgcaattgtttacttgagatt 366  Q
    |||||||||||||||||||| |||  |||| ||||||||||||| |||||||||||||||||    
T  13021153 cctcgggcactaaaataaacattaaacatcctatttcataacgctattgtttacttgagatt 13021092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 11 - 329
Target Start/End: Complemental strand, 12988324 - 12988002
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  ||||||||||||||||| ||||||| |||  ||| |||||||||||||||||||| |||||||||||| || |||| |    
T  12988324 tctaggaatggataatcgtttatttgtgatattaggttagcgttcttcaaatcttctaagaatattagatcacctaaggaattagggactgtaatatgcg 12988225  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     |||| ||||| |  ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |    
T  12988224 aagagggtcctaagtcaagggattgattagagctatgtatgttaatcatcgtaaaactagagaaatattcatgaggaataggtgcagtgtaccaattacg 12988125  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaacaaccttattttatgttatttactttttatgc-acacaaacctactg 304  Q
    |||||| ||||||||  ||||| ||||||  |  ||||||||| ||||||||||||| ||||||| |  |||||||||||||||| | ||||||||||||    
T  12988124 ggaacttagaggattcaaaagacctagtc--acatctctctatattttataaacaactttattttctactatttactttttatgcaaaacaaacctactg 12988027  T
Q  305 cctcgggcactaaaataaactttac 329  Q
    |||||| ||||||||||||| ||||    
T  12988026 cctcggccactaaaataaacattac 12988002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 307
Target Start/End: Complemental strand, 9839593 - 9839294
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  |||||||||||| |||||||||| |||||||||| |||| ||||||| ||||||| |||||||||||| |||| ||||    
T  9839593 tctaggaatggataatcgtttatttgtgatattaagttaacgttcgtaaaactttcgaagattattagaccacctaaggaattagggactgtagtttgag 9839494  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||||||||| ||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| |||||||||||    
T  9839493 aagagggtcctaagtcaagggattgattagggctacttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtataccaattagg 9839396  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaac-aaccttattttatgttatttactttttatgcacacaaacctactg 304  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||| || |||| ||||| ||| ||||||| | ||||||| |||||||||||||||| ||| ||    
T  9839395 ggaacatagatgattcgaaagacctgatctcatctctctc-atattttctaaacaaactttattttcttttatttaatttttatgcacacaaatctattg 9839297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 2846227 - 2846448
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttctt-aaaactttcaaagaatattagatcacctaatgaattagggactatagtatga 109  Q
    ||||||| ||||||||| ||  |||||||||||| |||||||||||| ||||| |||||||||||||||| ||||||| ||||||||| || |||| |||    
T  2846227 tctaggaatggataatcttttatttgtgatattaagttaacgttctttaaaaccttcaaagaatattagaccacctaaggaattaggggctgtagtttga 2846326  T
Q  110 gaagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattag 204  Q
    |||||| ||| || ||||||||     ||| ||||||||| ||||| |||||| |||||| ||||  |||| | ||||||||||||||| ||||||||||    
T  2846327 gaagagggtcctatgtcaagggattgattatggctatttt-gttaaccatcgtgaaactagagaatcattcgtaagaaataggtgcagtataccaattag 2846425  T
Q  205 gggaactcagaggatttgaaaga 227  Q
    ||| ||| |||||||| ||||||    
T  2846426 ggggacttagaggattcgaaaga 2846448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 28848766 - 28848960
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| | ||||||||||  ||||||||| |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||| || | ||||    
T  28848766 tctaggaatagataatcgtttatttgtgataataggttaacgttctcaaaaccttcaaagaatatcagatcacctaaggaattagggactgtaatttgag 28848865  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaa 200  Q
    ||||| | | |||||||||||     | ||| ||||||||||||| ||||||||||||| |||| ||| |||||| |||| ||  ||||||||||    
T  28848866 aagagggccctaagtcaagggatttatcaggactattttagttaaccatcgtaaaactagagaagtatccatgaggaataagtttagtgtaccaa 28848960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 2379155 - 2379393
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||  | || |||| ||||    
T  2379155 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattacaggctgtagtttgag 2379254  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  2379255 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 2379352  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| ||||||||||| ||  ||| ||||||||||    
T  2379353 ggaacatagatgatttgaaagacctgatctcatctctctct 2379393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 3596980 - 3596742
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  3596980 tctaggaatggataatcgtttgttagtgatattaggttaatgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 3596881  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  3596880 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 3596783  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  | | |||| |||||| ||| ||| ||||||||||    
T  3596782 ggaacataaatgattcgaaagacctaatctcatctctctct 3596742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 5738283 - 5738081
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  5738283 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 5738184  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  5738183 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 5738086  T
Q  206 ggaac 210  Q
    |||||    
T  5738085 ggaac 5738081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 11402182 - 11402380
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||||||  |||||||| ||    
T  11402182 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaacacctaaggaattaggggatatagtataag 11402281  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||| |||||| || |||||||||||| |||||||||||    
T  11402282 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaaacattcataag-aataggtgcagtataccaattagg 11402379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 23007986 - 23008265
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  |||||||||| ||||||||||||||||||| || ||||||||||||| ||||||| ||||||| | || || | |||     
T  23007986 tctaggaatggataatcgtttatttgtgatatcaggttaacgttcttaaaacctttaaagaatattagaccacctaaggaattagaggctgtaatctgat 23008085  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||||||||||||| |||||  ||||| |||||| ||||  |||||  || ||||||||  ||| |||||||| |    
T  23008086 aagagggtcctaagtcaagggattgattagggctatttt-gttaactatcgtgaaactaaagaatcattcacaag-aataggtgttgtggaccaattatg 23008183  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaacaa--ccttattttatgttatttactttt 285  Q
    | ||||||||||||| ||||||  |  ||| ||||||||   | ||||  ||||||  | ||||||||||||||||||||||    
T  23008184 gaaactcagaggattcgaaagacttgatctcatctctcttcttattttccaaacaaatctttattttatgttatttactttt 23008265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 23780378 - 23780099
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  |||||||||| ||||||||||||||||||| || ||||||||||||| ||||||| ||||||| | || || | |||     
T  23780378 tctaggaatggataatcgtttatttgtgatatcaggttaacgttcttaaaacctttaaagaatattagaccacctaaggaattagaggctgtaatctgat 23780279  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||||||||||||| |||||  ||||| |||||| ||||  |||||  || ||||||||  ||| |||||||| |    
T  23780278 aagagggtcctaagtcaagggattgattagggctatttt-gttaactatcgtgaaactaaagaatcattcacaag-aataggtgttgtggaccaattatg 23780181  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaacaa--ccttattttatgttatttactttt 285  Q
    | ||||||||||||| ||||||  |  ||| ||||||||   | ||||  ||||||  | ||||||||||||||||||||||    
T  23780180 gaaactcagaggattcgaaagacttgatctcatctctcttcttattttccaaacaaatctttattttatgttatttactttt 23780099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 1125934 - 1125814
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  1125934 tctaggaatggataatcctttattagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 1125835  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||||||| |||||||    
T  1125834 aagagggtcttaactcaaggg 1125814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 30655369 - 30655489
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  30655369 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 30655468  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  30655469 aagagggtcctaattcaaggg 30655489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 11247687 - 11247924
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  |||||||||||| ||||||||||||||||| |||||||||||||||| ||||||| ||||||||| || || | |||     
T  11247687 tctaggaatgaataatcgtttatttgtgatattaagttaacgttcttaaaaccttcaaagaatattagaccacctaaggaattaggg-ctgtaatctgat 11247785  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||||||  |||||||||||     ||| || |||||| ||||| |||| | |||||| ||||  |||| | ||||||| ||| ||| ||| |||||||    
T  11247786 aagagagttctaagtcaagggattgattaaggatatttt-gttaaccatcatgaaactagagaatcattcgtaagaaataagtgtagtatacaaattagg 11247884  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    ||||| ||||||||| |||| | ||  ||| ||||||||||    
T  11247885 ggaac-cagaggattcgaaaaaactgatctcatctctctct 11247924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 13005114 - 13005352
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| | ||||||||||  || |||||||||||||||||| |||||||  |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  13005114 tctaggaatagataatcgtttattagtgatattaggttaacgtacttaaaaaattcaaagattattagaccacctaaggaattaggggttgtagtttgag 13005213  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| ||||  |||||| || |||||||| ||| |||||||||||    
T  13005214 aagagggtcataactcaagggattgattaggactatttt-gttaactatcgtggaactagagaatcattcataag-aataggtgaagtataccaattagg 13005311  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| ||||||||||| ||  ||| ||||||||||    
T  13005312 ggaacatagatgatttgaaagacctgatctcatctctctct 13005352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 20185670 - 20185871
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||| |||||||| ||| |||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  20185670 tctaggaatggataatcgtttattagtgatattaggttaacattcttaaacctt-caaagattattagaccacctaaggaattaggggctgtagtttgag 20185768  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||| | ||||||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| |||||||||||    
T  20185769 aagagggtcctaagtcaagggattgattatgactatttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtataccaattagg 20185866  T
Q  206 ggaac 210  Q
    |||||    
T  20185867 ggaac 20185871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 22150321 - 22150120
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||| |||||||| ||| |||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  22150321 tctaggaatggataatcgtttattagtgatattaggttaacattcttaaacctt-caaagattattagaccacctaaggaattaggggctgtagtttgag 22150223  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||| | ||||||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| |||||||||||    
T  22150222 aagagggtcctaagtcaagggattgattatgactatttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtataccaattagg 22150125  T
Q  206 ggaac 210  Q
    |||||    
T  22150124 ggaac 22150120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 22561362 - 22561124
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  ||| |||||||| |||||||||| |||||| |||||||| ||| ||||||||||| ||||||||| || |||| ||||    
T  22561362 tctaggaatggataatcgtttatttctgatattaagttaacgttcgtaaaaccttcaaagattatgagatcacctaaggaattaggggctgtagtttgag 22561263  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||| | ||||||| ||| |  ||||| |||| | | ||  |||||| || |||||||||||| |||||||||||    
T  22561262 aagagggtcctaactcaagggattgattaagactatttt-gttgactatcgtgaaaccagaaaatcattcataag-aataggtgcagtataccaattagg 22561165  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| ||||||||||| ||  ||| ||||||||||    
T  22561164 ggaacgtagatgatttgaaagacctgatctcatctctctct 22561124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 24371200 - 24371289
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggact 100  Q
    ||||||| ||||||||||||  ||||||||| |||||||| ||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  24371200 tctaggaatggataatcgtttatttgtgataataggttaatgttcttaaaaccttcaaataatattagatcacctaaggaattagggact 24371289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 17106808 - 17106689
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| |||||||||||| ||| |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  17106808 tctaggaatggataatcgttttttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggttgtagtttgag 17106710  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| |||||||||||    
T  17106709 aagagggtcctaagtcaaggg 17106689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 6513192 - 6513301
Alignment:
Q  22 ataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtctt 121  Q
    |||||||||  || |||||||||||||||||| |||||||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||||||||||| |    
T  6513192 ataatcgtttattagtgatattaggttaacgtacttaaaaccttcaaagattattagaccacctaaggaattaggggatgtagtttgagaagagagtcct 6513291  T
Q  122 aagtcaaggg 131  Q
    || |||||||    
T  6513292 aactcaaggg 6513301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 14281719 - 14281500
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| | ||||||||||  || |||||||||||||||||| |||||||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  14281719 tctaggaattgataatcgtttattagtgatattaggttaacgtacttaaaaccttcaaagattattagaccacctaaggaattaggggttgtagtttgag 14281620  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| | |||||     ||||| ||||||| |||||  ||||| |||| | ||||  |||||| || |||||||||||| | |||||||||    
T  14281619 aagagggtcctaacttaagggattgattaggactatttt-gttaactatcgtgaaacaagagaatcattcataag-aataggtgcagtatcccaattagg 14281522  T
Q  206 ggaactcagaggatttgaaaga 227  Q
    |||||  ||| |||| ||||||    
T  14281521 ggaacatagatgattcgaaaga 14281500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 246
Target Start/End: Complemental strand, 23384939 - 23384713
Alignment:
Q  22 ataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtctt 121  Q
    |||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| || |||| ||||||||| || |||| ||||||||| ||| |    
T  23384939 ataatcgtttattagtgatattaggttaacgtgctt-aaaccttcaaagattattagaacaactaaggaattaggggctgtagtttgagaagagggtcct 23384841  T
Q  122 aagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagag 216  Q
    || |||||||     ||||| ||||||| |||||  |||||  ||||| | ||| |||||| || |||||||||||| ||||||||||||||||  |||     
T  23384840 aaatcaagggattgattaggactatttt-gttaactatcgtggaactagaaaaacattcataag-aataggtgcagtataccaattaggggaacatagat 23384743  T
Q  217 gatttgaaagatctagtctaatctctctct 246  Q
    || | |||||| ||| ||| ||||||||||    
T  23384742 gaatcgaaagacctaatctcatctctctct 23384713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 26942633 - 26942432
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| ||||||||| || || | ||||    
T  26942633 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagtttattagaccacctaaggaattaggggctgtaatttgag 26942535  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  26942534 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcat-aggaataggtgcagtataccaattagg 26942437  T
Q  206 ggaac 210  Q
    |||||    
T  26942436 ggaac 26942432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 9953889 - 9954124
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  9953889 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggttgtagtttgag 9953987  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||| | ||||||| |||||  |||||  || || | || ||||||| || |||||||||||| |||||||||||    
T  9953988 aagagggtcctaactcaagggattgattaagactatttt-gttaactatcgtggaattagaaaattattcataag-aataggtgcagtataccaattagg 9954085  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  9954086 ggaacatagatgattcgaaagagctgatctcatctctct 9954124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 5259862 - 5259938
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaa 87  Q
    ||||||| ||| ||||||||  |||||||||||| ||||||||||||||||| |||||||| ||||||| |||||||    
T  5259862 tctaggaatgggtaatcgtttatttgtgatattaagttaacgttcttaaaaccttcaaagagtattagaccacctaa 5259938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 313
Target Start/End: Original strand, 24371311 - 24371449
Alignment:
Q  176 atgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaacaa--ccttattttatg 273  Q
    |||||||||||||||||||| || |  |||| ||||||||||||| |||| | ||||||| |||||||  ||| ||||  ||||||  | ||||||| ||    
T  24371311 atgagaaataggtgcagtgtgccgaacagggaaactcagaggattcgaaatacctagtctcatctctccatatattttccaaacaaatctttattttctg 24371410  T
Q  274 ttatttactttttatgcacacaaacctactgcctcgggca 313  Q
    |||||||| |||||||||  |||| ||||||||| |||||    
T  24371411 ttatttac-ttttatgcaatcaaatctactgcctagggca 24371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 28111964 - 28111845
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || | |||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  28111964 tctaggaatgaagaatcgtttattagtgatattaggttaacgtactt-aaaccttcaaagattattagaccacctaaggaattaggggatgtagtttgag 28111866  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  28111865 aagagggtcctaactcaaggg 28111845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 10289898 - 10290000
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||| || ||| |||| |||||||| ||||||| ||||||| ||||||||| || || | ||||    
T  10289898 tctaggaatggataatcgtttgttagtgatattaggttaatgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtaatttgag 10289996  T
Q  111 aaga 114  Q
    ||||    
T  10289997 aaga 10290000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 13095651 - 13095610
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  13095651 ttatttactttttatgcacacaaacctactgcctcaggcact 13095610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 7128225 - 7128310
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| ||||||   ||||||| ||||||| |||||||||    
T  7128225 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaatgttattagaccacctaaggaattaggg 7128310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 14966418 - 14966458
Alignment:
Q  275 tatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  14966418 tatttactttttatgcacacaaatctactgcctcaggcact 14966458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 34502530 - 34502580
Alignment:
Q  264 ttattttatgttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||| ||||||||||||| | ||||||||||||||||||||| ||||||    
T  34502530 ttattttctgttatttactttat-tgcacacaaacctactgcctcaggcact 34502580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Complemental strand, 3826744 - 3826710
Alignment:
Q  281 ctttttatgcacacaaacctactgcctcgggcact 315  Q
    |||||||||||||||||||||||||||| ||||||    
T  3826744 ctttttatgcacacaaacctactgcctcaggcact 3826710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 28230520 - 28230605
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| || |||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  28230520 tctaggaatgaataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 28230605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 19475929 - 19476013
Alignment:
Q  12 ctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    |||||| ||||||||| ||  || |||||| |||||||||| | ||||||| |||||||  ||||||| ||||||| |||||||||    
T  19475929 ctaggaatggataatcctttattagtgatagtaggttaacg-tgttaaaaccttcaaaggttattagaccacctaaggaattaggg 19476013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 4512575 - 4512639
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| |||  || ||||||||||    
T  4512575 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 4512639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 11125894 - 11125819
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaa 87  Q
    ||||||| ||||||||||||  ||  ||||||| ||||||||| ||| |||| |||||||| ||||||| |||||||    
T  11125894 tctaggaatggataatcgtttgttactgatatttggttaacgtgctt-aaaccttcaaagattattagaccacctaa 11125819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 14969902 - 14969938
Alignment:
Q  279 tactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  14969902 tactttttatgcacacaaatctactgcctcaggcact 14969938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 18856050 - 18855986
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| |||  || ||||||||||    
T  18856050 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 18855986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 26896284 - 26896220
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| |||  || ||||||||||    
T  26896284 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 26896220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 366
Target Start/End: Original strand, 21915045 - 21915406
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| || | ||||    
T  21915045 tctaggaatgaataatcgtttatttgtgatattaggttaacgttcttcaaaccttcaaagaatattagatcacctaaggaattagggactgtaatctgag 21915144  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||||||||||||||||||| |||||| ||| || |||||||||||| ||||||||||| |||||||||||||||    
T  21915145 aagagggtcataagtcaagggattgattagggctattttagttaaccatcgtgaaattagagaaatattcataagaaataggtgtagtgtaccaattagg 21915244  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaacaaccttattttatgttatttactttttatgcac-acaaacctactg 304  Q
    |||||||| |||||| |||||| ||||||  |||||||||||||||||  || ||| |||||||| | ||||||||||||||||||| ||||||||||||    
T  21915245 ggaactcaaaggattcgaaagacctagtcacatctctctctatcttttccaatcaatcttattttctattatttactttttatgcacaacaaacctactg 21915344  T
Q  305 cctcgggcactaaaataaactttactcatcttatttcataacgcaattgtttacttgagatt 366  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||  |||| ||||||||||||    
T  21915345 cctcgggcactgaaataaactttacacatcctatttcataacgttattgcttacttgagatt 21915406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 19 - 319
Target Start/End: Original strand, 31575347 - 31575654
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    |||||| |||||  ||||||||||||||||||| |||||   |||| ||||||||||||||| |||||  ||||||| |||| || | ||||||||||||    
T  31575347 tggatattcgtttatttgtgatattaggttaactttctttttactt-caaagaatattagattacctagggaattagagactgtaatttgagaagagagt 31575445  T
Q  119 cttaagtcaaggg------ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactc 212  Q
    |  ||||||| ||      |||| |||||||||||||| |||||| |||||| ||||||||||||  ||||||| ||||||||||||| |||||||| ||    
T  31575446 cccaagtcaaagggattgattagagctattttagttaaccatcgtgaaactagagaaatattcatatgaaatagctgcagtgtaccaaataggggaagtc 31575545  T
Q  213 agaggatttgaaagatctagtctaatctctctctatcttttataaac-aaccttattttatg-ttatttactttttatgcacacaaacctactgcctcgg 310  Q
    | |||||| |||||| ||||||| |||||||  ||||||||  |||| ||| ||||||| || |||||| |||||   |||||||||| |||||||||||    
T  31575546 ataggattcgaaagacctagtctcatctctccatatcttttccaaacaaactttattttttgtttattttcttttctggcacacaaacttactgcctcgg 31575645  T
Q  311 gcactaaaa 319  Q
    |||||||||    
T  31575646 gcactaaaa 31575654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 41876963 - 41876727
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  41876963 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 41876864  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | || ||||||| || |||||||||||| |||||||||||    
T  41876863 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaattattcataag-aataggtgcagtataccaattagg 41876766  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  41876765 ggaacatagatgattcgaaagacctgatctcatctctct 41876727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 18239695 - 18239475
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  | ||| |||||| ||||||||||||||||| |||||||| ||||||| |||||||  ||||||||  | || | |||     
T  18239695 tctaggaatggataatcgtttatatgtaatattaagttaacgttcttaaaaccttcaaagagtattagaccacctaagaaattaggggttttactctgac 18239596  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||| | ||| |||||||||||     ||||||||||||| |||||| ||||| |||||| ||||  ||||   |||||||||||||||  ||||||||||    
T  18239595 aagggggtcctaagtcaagggattgattagggctatttt-gttaattatcgtgaaactagagaatcattcgaaagaaataggtgcagtacaccaattagg 18239497  T
Q  206 ggaactcagaggatttgaaaga 227  Q
    ||||||||||||||| ||||||    
T  18239496 ggaactcagaggattcgaaaga 18239475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 22937136 - 22936901
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||| || | ||||    
T  22937136 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcttaaaaccttcaaagaatattagctcacctaaggaattagggactgtaatctgag 22937037  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| | |||||     ||||| ||||||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| |||||||||||    
T  22937036 aagagggtcctaactaaagggattgattaggactatttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtataccaattagg 22936939  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctc 243  Q
    |||||   || || | |||||| ||||||| |||||||    
T  22936938 ggaacattgatgactcgaaagacctagtctcatctctc 22936901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 42062845 - 42063080
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||| || ||||||    
T  42062845 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcttaaaaccttcaaagaatattagttcacctaaggaattagggactgtaatatgag 42062944  T
Q  111 aagagagtcttaagtcaag-----ggttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||     | ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  42062945 aagagggtcctaactcaagagattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 42063042  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctc 243  Q
    | |||  ||| ||||  ||||| ||||||| |||||||    
T  42063043 gaaacatagatgattcaaaagacctagtctcatctctc 42063080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 26752900 - 26752698
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  26752900 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 26752801  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| ||||| ||||||||| |||||||||||    
T  26752800 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataagaaa-aggtgcagtataccaattagg 26752703  T
Q  206 ggaac 210  Q
    |||||    
T  26752702 ggaac 26752698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 34831688 - 34831923
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  34831688 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggttgtagtttgag 34831786  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | || ||||||| || |||||||||| | |||||||||||    
T  34831787 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaattattcataag-aataggtgcattataccaattagg 34831884  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||||||| |||| |||||| ||| ||| ||||||||    
T  34831885 ggaactcagaagattcgaaagacctaatctcatctctct 34831923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 319
Target Start/End: Original strand, 7625026 - 7625340
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  || |||||||||||||||||| ||| |||| ||| |  | ||||||| ||||||| ||||||| | || |||| ||||    
T  7625026 tctaggaatgaataatcgtttgttagtgatattaggttaacgtgctttaaaccttcgagaattattagaccacctaaggaattagaggctgtagtttgag 7625125  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||||||| ||| |||||||     ||||||||||||| |||||  |||||  ||||| | ||  ||| || | ||||||||| ||| |||||||||||    
T  7625126 aagagagtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaaaatcattaat-acaaataggtgtagtataccaattagg 7625223  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatctttt-ataaacaaccttattttatgttatttactttttatgcacacaaacctac 302  Q
    |||||   || ||||||||||| ||  ||| |||||||||  | ||||||   |||| | |||||||| ||||||||||||||||||||  |||| ||||    
T  7625224 ggaacatcgatgatttgaaagacctgatctcatctctctccttgtcttttccaaaactatcttattttctgttatttactttttatgcaatcaaaactac 7625323  T
Q  303 tgcctcgggcactaaaa 319  Q
    |||||||||||||||||    
T  7625324 tgcctcgggcactaaaa 7625340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 36 - 246
Target Start/End: Original strand, 31863663 - 31863876
Alignment:
Q  36 gtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg---- 131  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| ||||||| |||||||||  || ||| |||||||        
T  31863663 gtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctatagtttgagaagaggatcctaactcaagggattg 31863762  T
Q  132 -ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaagatct 230  Q
     ||| | ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| || |||||||||||||  ||| |||| |||||| ||    
T  31863763 attatgactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtatatcaattaggggaacatagatgattcgaaagacct 31863860  T
Q  231 agtctaatctctctct 246  Q
    ||||| ||||||||||    
T  31863861 agtctcatctctctct 31863876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 26895802 - 26895565
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||||| ||| |||||| ||||||| ||||||| ||||||| | || |||| ||||    
T  26895802 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcttaaacctt-caaagattattagaccacctaaggaattagaggctgtagtttgag 26895704  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||||||||||| |||||||     ||||| ||||||| |||||| |||||  ||||| | ||  |||||| || ||||||||||   |||||||||||    
T  26895703 aagagagtcttaactcaagggattgattaggactatttt-gttaattatcgttgaactaaaaaatcattcataag-aataggtgcaacataccaattagg 26895606  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||||    
T  26895605 ggaacatagatgattcgaaagacctgatctcatctctctct 26895565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 240
Target Start/End: Complemental strand, 4099715 - 4099484
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||||| ||| |||| | ||||||| ||||||| ||||||||| || |||| ||||    
T  4099715 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcttaaatctt-caaatattattagaccacctaaagaattaggggctgtagtttgag 4099617  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| |||||||||||||||     ||| | ||||||| | |||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  4099616 aagagggtcttaagtcaagggattgattatgactatttt-gctaactatcgtgcaactagaaaatcattcataag-aataggtgcagtataccaattagg 4099519  T
Q  206 ggaactcagaggatttgaaagatctagtctaatct 240  Q
    |||||  ||| |||| |||||| ||||||| ||||    
T  4099518 ggaacatagatgattcgaaagacctagtctcatct 4099484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 18952619 - 18952854
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaa 112  Q
    ||||| |||||||| |||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||||    
T  18952619 taggaatggataattgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgagaa 18952717  T
Q  113 gagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagggg 207  Q
    ||| ||| ||| |||||||     ||| | ||||||| |||||  |||||  ||||| ||||  |||||| || |||| ||||||| |||||||||||||    
T  18952718 gagggtcctaactcaagggattgattatgactatttt-gttaactatcgtggaactagagaatcattcataag-aatatgtgcagtataccaattagggg 18952815  T
Q  208 aactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||  ||| |||||||||||| |  ||| ||||||||||    
T  18952816 aacatagatgatttgaaagatttgatctcatctctctct 18952854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 21332870 - 21332641
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || |||||||||||||||||| ||| |||| |||||||| |||||||||| |||| ||||||||| || |||| ||||||||| ||    
T  21332870 tggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagatcatctaaggaattaggggctgtagtttgagaagagggt 21332772  T
Q  119 cttaagtcaa-----gggttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactca 213  Q
      ||||||||      | ||||| |||||||| ||||  |||||  ||||| ||||  |||||| || |||||||||||| ||||||||||||||||  |    
T  21332771 tctaagtcaatgaattgattaggactatttta-ttaactatcgtggaactagagaatcattcataag-aataggtgcagtataccaattaggggaacata 21332674  T
Q  214 gaggatttgaaagatctagtctaatctctctct 246  Q
    || |||| |||||| ||  ||| ||||||||||    
T  21332673 gatgattcgaaagacctgatctcatctctctct 21332641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 21335888 - 21335678
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || |||||||||||||||||| |||||| ||| |||||| ||||||||||||||| ||||||||| || |||| ||||||||  ||    
T  21335888 tggataatcgtttgttagtgatattaggttaacgtgcttaaacctt-caaagattattagatcacctaaggaattaggggctgtagtttgagaagacggt 21335790  T
Q  119 cttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactca 213  Q
      |||||||| ||     ||||| ||||||| |||||  |||||  ||||| ||||  |||||| || |||||||||||| ||| ||||||||||||  |    
T  21335789 tctaagtcaaaggattgattaggactatttt-gttaactatcgtggaactagagaatcattcataag-aataggtgcagtatacaaattaggggaacata 21335692  T
Q  214 gaggatttgaaaga 227  Q
    || |||| ||||||    
T  21335691 gatgattcgaaaga 21335678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 2837235 - 2837347
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || |||||| ||||||||||||| |||||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||||||| ||    
T  2837235 tggataatcgtttattagtgataataggttaacgttcataaaaccttcaaagattattagaccacctaaggaattaggggttgtagtttgagaagagggt 2837334  T
Q  119 cttaagtcaaggg 131  Q
    | ||| |||||||    
T  2837335 cctaaatcaaggg 2837347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 41306717 - 41306507
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || |||||||||||||||| | ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||| ||||| ||    
T  41306717 tggataatcgtttgttagtgatattaggttaacatgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgaaaagagggt 41306619  T
Q  119 cttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactca 213  Q
    | ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| | ||||||||||||| ||||||||||||||||  |    
T  41306618 cctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcat-aaaaataggtgcagtataccaattaggggaacata 41306521  T
Q  214 gaggatttgaaaga 227  Q
    || |||| ||||||    
T  41306520 gatgattcgaaaga 41306507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 14376006 - 14375888
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||   | |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  14376006 tctaggaatggataatcgtttgctagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattagggtctgtagtttgag 14375908  T
Q  111 aagagagtcttaagtcaagg 130  Q
     |||| ||| ||| ||||||    
T  14375907 tagagggtcctaactcaagg 14375888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 40583173 - 40583408
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| | ||||||||||  || |||||||||||||||||| ||| |||| ||| |||| ||||||| ||||||| |||||||||  | |||| | ||    
T  40583173 tctaggaatagataatcgtttcttagtgatattaggttaacgtgctt-aaaccttcgaagattattagaccacctaaggaattaggggttgtagtttaag 40583271  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  || |||||||  |||||| || |||||||||||| |||||||||||    
T  40583272 aagagggtcataactcaagggattgattaggactatttt-gttaactatcgtggaattatagaatcattcataag-aataggtgcagtataccaattagg 40583369  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
     ||||   ||||||| |||||| |||  || ||||||||    
T  40583370 agaacatcgaggattcgaaagacctaaactcatctctct 40583408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 22131161 - 22131355
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || |||||||||||||||||| |||||||| ||||| || ||||| | ||||||| ||||||||   | |||| ||||||||| ||    
T  22131161 tggataatcgtttattagtgatattaggttaacgtgcttaaaaccttcaaggattattaaaccacctaaggaattaggtgttgtagtttgagaagagggt 22131260  T
Q  119 cttaagtcaag-----ggttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaac 210  Q
    | ||| |||||     | |||||  |||||| |||||  |||||| ||||| ||||  |||||| |  |||||||||||| ||||||||||||||||    
T  22131261 cctaactcaagagattgattaggaatatttt-gttaactatcgtagaactagagaatcattcat-acgaataggtgcagtataccaattaggggaac 22131355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 43491679 - 43491783
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| | |||||  |||||||| ||||| | ||||||| |||||||||  | |||| ||||    
T  43491679 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcataaaatcttcaaagattattaaaccacctaaggaattagggggtctagtttgag 43491778  T
Q  111 aagag 115  Q
    |||||    
T  43491779 aagag 43491783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 2453470 - 2453521
Alignment:
Q  264 ttattttatgttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| ||||||    
T  2453470 ttattttctgttatttactttttatgcacataaacctactgcctcaggcact 2453521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 20055698 - 20055800
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||  ||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  20055698 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-taaccttcaaagattattagaccacctaaggaattaggggttgtagtttgag 20055796  T
Q  111 aaga 114  Q
    ||||    
T  20055797 aaga 20055800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 30066266 - 30066348
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaatta 94  Q
    ||||||| ||||||||||||  || | |||||||||||||||||||| |||| |||||||| ||||||| ||||||| ||||||    
T  30066266 tctaggagtggataatcgtttgttagagatattaggttaacgttctt-aaaccttcaaagattattagaccacctaaggaatta 30066348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 32837941 - 32838007
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatatta 77  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||||||| |||||||| |||||    
T  32837941 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcttaaaaccttcaaagattatta 32838007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 19686357 - 19686409
Alignment:
Q  264 ttattttatgttatttactttttat-gcacacaaacctactgcctcgggcact 315  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||    
T  19686357 ttattttctgttatttactttttattgcacacaaacctactgcctcaggcact 19686409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 19689740 - 19689792
Alignment:
Q  264 ttattttatgttatttactttttat-gcacacaaacctactgcctcgggcact 315  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||    
T  19689740 ttattttctgttatttactttttattgcacacaaacctactgcctcaggcact 19689792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 18765819 - 18765756
Alignment:
Q  33 tttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagg 96  Q
    |||||||||||||||||||| ||||||||| ||| |||||| ||||| ||| ||| ||||||||    
T  18765819 tttgtgatattaggttaacgctcttaaaaccttcgaagaatgttagaccacttaaggaattagg 18765756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 12058690 - 12058605
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  12058690 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 12058605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 12087882 - 12087967
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  12087882 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 12087967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 17664476 - 17664561
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| | ||||||| ||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||    
T  17664476 tctaggaatcgataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggg 17664561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 18765709 - 18765647
Alignment:
Q  138 ctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaa 200  Q
    ||||||||||||| ||||||||||||| |||| ||| |||  |||||||||||||| ||||||    
T  18765709 ctattttagttaaccatcgtaaaactagagaagtatgcataggaaataggtgcagtttaccaa 18765647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 34133181 - 34133096
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  34133181 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 34133096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 34143412 - 34143327
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  34143412 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 34143327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 308
Target Start/End: Complemental strand, 40799849 - 40799815
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctc 308  Q
    |||||||||||||||||||||||||||||||||||    
T  40799849 ttatttactttttatgcacacaaacctactgcctc 40799815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 3195283 - 3195320
Alignment:
Q  278 ttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  3195283 ttactttttatgcacacaaacctactgcctcaggcact 3195320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 33552046 - 33552164
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||| || ||| |||| |||||||| || |||| ||| ||| |||||||||  | |||| ||||    
T  33552046 tctaggaatggataatcgtttgttagtgatattaggttaatgtgctt-aaaccttcaaagatta-tagaccacttaaggaattaggggttgtagtttgag 33552143  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  33552144 aagagggtcctaactcaaggg 33552164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 39192252 - 39192371
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| | ||||||||||  || ||||||||||||||| || ||| |||| || ||||| ||||| | ||||||| |||||||||  | |||| | ||    
T  39192252 tctaggaatagataatcgtttgttagtgatattaggttaatgtgctt-aaaccttgaaagattattataccacctaaggaattaggggttgtagtttaag 39192350  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||||||| |||||||    
T  39192351 aagagggtcttaactcaaggg 39192371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 563458 - 563372
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| || |||||||||   ||||||||||| ||||| | | | ||||| ||  |||||||||||||||||||| |||||||||    
T  563458 tctaggaatgaataatcgtttaattgtgatattatgttaatgctttgaaaacctttgaagaatattagatcacctaaagaattaggg 563372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 26292715 - 26292800
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| || |||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  26292715 tctaggaatgtataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 26292800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Original strand, 30764430 - 30764464
Alignment:
Q  281 ctttttatgcacacaaacctactgcctcgggcact 315  Q
    |||||||||||||||||||||||||||| ||||||    
T  30764430 ctttttatgcacacaaacctactgcctcaggcact 30764464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 26548278 - 26548319
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    |||| |||||||||| ||||||||||||||||||| ||||||    
T  26548278 ttatatactttttatacacacaaacctactgcctcaggcact 26548319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 26551837 - 26551878
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    |||| |||||||||| ||||||||||||||||||| ||||||    
T  26551837 ttatatactttttatacacacaaacctactgcctcaggcact 26551878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 28562293 - 28562252
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    |||| |||||||||| ||||||||||||||||||| ||||||    
T  28562293 ttatatactttttatacacacaaacctactgcctcaggcact 28562252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 28565861 - 28565820
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    |||| |||||||||| ||||||||||||||||||| ||||||    
T  28565861 ttatatactttttatacacacaaacctactgcctcaggcact 28565820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 28787520 - 28787471
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaa 60  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||||||    
T  28787520 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcttaaa 28787471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 12088055 - 12088119
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| |||  || ||||||||||    
T  12088055 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 12088119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 14016337 - 14016217
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||| || ||| |||| ||| |  | ||||| | |||||||  ||||||||  | |||| ||||    
T  14016337 tctaggaatggataatcgtttgttagtgatattaggttaaagtgctttaaaccttcgagaattattaaaccacctaagaaattaggggttgtagtttgag 14016238  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  14016237 aagagggtcctaactcaaggg 14016217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 26907480 - 26907416
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| |||  || ||||||||||    
T  26907480 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 26907416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 166; Significance: 9e-89; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 11 - 366
Target Start/End: Original strand, 7635570 - 7635930
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| | ||||||||||  ||||| |||  ||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||| || | ||||    
T  7635570 tctaggaatagataatcgtttatttgtaataagaggttaacgttcttaaaaccttcaaagaatattagatcacctaaggaattatggactgtaatctgag 7635669  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||||||||||      |||||| ||||||||||||||||||| |||||| ||||||||||||  ||| |||||||||||||||||||| |    
T  7635670 aagagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtgtaccaattatg 7635769  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaacaaccttattttatgttatttactttttatgcac-acaaacctactg 304  Q
    |||| | |||| ||| |||||| ||||||||||||||||||||||||| |||||||| ||||||| || |||||||||||||||||| ||||||||||      
T  7635770 ggaatttagagaattcgaaagacctagtctaatctctctctatcttttctaaacaactttattttctgatatttactttttatgcacaacaaacctacca 7635869  T
Q  305 cctcgggcactaaaataaactttactcatcttatttcataacgcaattgtttacttgagatt 366  Q
    ||||||| ||||||||||| ||||| |||| ||||||||||| | |||||||| ||||||||    
T  7635870 cctcgggtactaaaataaa-tttacacatcctatttcataacactattgtttaattgagatt 7635930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 33 - 366
Target Start/End: Complemental strand, 16056980 - 16056640
Alignment:
Q  33 tttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg- 131  Q
    |||||||||||||||||||||| || |||| || |||| |||||||||||||||| ||||||||||   || | ||||||||| ||| |||||||||||     
T  16056980 tttgtgatattaggttaacgttattcaaacctttaaagtatattagatcacctaaggaattagggatcgtaatctgagaagagggtcctaagtcaaggga 16056881  T
Q  132 ----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaaga 227  Q
        |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||| ||| || ||| ||||||    
T  16056880 ttgattagagctattttagttaatcatcgtaaaactagagaaatattcatgagaaataggtgtagtgtatcaattaggggaaatcaaagtattcgaaaga 16056781  T
Q  228 tctagtctaatctctctc--tatcttttataaacaa-ccttattttatgttatttactttttatgcac-acaaacctactgcctcgggcactaaaataaa 323  Q
     ||||||| |||||||||  || |||||  |||||| | ||||||| ||||||||| ||||||||||| ||||| |||||| ||| |||||||||   ||    
T  16056780 cctagtctcatctctctccataacttttccaaacaatctttattttctgttatttaatttttatgcacaacaaatctactgtctcaggcactaaa--taa 16056683  T
Q  324 ctttactcatcttatttcataacgcaattgtttacttgagatt 366  Q
    |||||| |||| |||||||||| || || ||||||||||||||    
T  16056682 ctttacacatcctatttcataatgctatcgtttacttgagatt 16056640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 27355887 - 27355648
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| || ||||||    
T  27355887 tctaggaatggataatcgtttatttgtgatattaggttaacgttcttaaaaccttcaaaaaatattagatcacctaatgaattagggactgtaatatgag 27355788  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||||| ||||||||||||| |||||| |||||| ||||||||||||  ||||||||||||||||||||||||||    
T  27355787 aagagggtcctaagtcaagggattgattaggcctattttagttaaccatcgtgaaactagagaaatattcataggaaataggtgcagtgtaccaattagg 27355688  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    | ||||||||  ||| |||||| ||||| | ||||||||||    
T  27355687 gaaactcaga-tattcgaaagacctagtttcatctctctct 27355648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 33 - 226
Target Start/End: Complemental strand, 13431136 - 13430938
Alignment:
Q  33 tttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg- 131  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||| |||||||| ||||||| |||| || ||||||||||||||| |||||||||||     
T  13431136 tttgtgatattaagttaacgttcgtaaaaccttcaaagaatattagctcacctaaggaattagagactgtaatatgagaagagagtcctaagtcaaggga 13431037  T
Q  132 ----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaag 226  Q
        |||||||||||| |||||| ||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||    
T  13431036 ttgattagggctatttaagttaaccatcgtaaaactagagaaatattcatgagaactaagtgcagtgtaccaattaggggaactcagaggattcgaaag 13430938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 33 - 245
Target Start/End: Complemental strand, 16061146 - 16060929
Alignment:
Q  33 tttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg- 131  Q
    |||||||||||||||||| |||||| |||| |  |||| |||||||||||||||| |||||||||| | || |||||||||||| || |||||||| ||     
T  16061146 tttgtgatattaggttaatgttcttcaaacctataaagtatattagatcacctaaggaattagggattgtaatatgagaagagaatcctaagtcaatgga 16061047  T
Q  132 ----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaaga 227  Q
        ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| | |||| ||||||    
T  16061046 ttgattagggctattttagttaatcatcgtaaaactagagaaatattcatgagaaataggtgcagtgtaccaattagggaaaatcaaatgattcgaaaga 16060947  T
Q  228 tctagtctaatctctctc 245  Q
     ||||||| |||||||||    
T  16060946 cctagtctcatctctctc 16060929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 72 - 366
Target Start/End: Complemental strand, 16062353 - 16062051
Alignment:
Q  72 atattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactata 166  Q
    |||||||||||  ||| |||||||||| | || | ||||||||| ||  ||||| |||||     ||| ||||||||||||||||||||||||||||| |    
T  16062353 atattagatcatttaaggaattagggattgtaatctgagaagagggttctaagttaagggattaattatggctattttagttaatcatcgtaaaactaga 16062254  T
Q  167 gaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctc--tatcttttataaacaa-cc 263  Q
    ||||||||||||||||||||||| ||||||||||||| || || ||| | |||| |||||| ||||||| |||||| ||  || |||||  |||||| |     
T  16062253 gaaatattcatgagaaataggtgtagtgtaccaattatggaaaatcaaatgattcgaaagacctagtctcatctctttccataactttttcaaacaatct 16062154  T
Q  264 ttattttatgttatttactttttatgcac-acaaacctactgcctcgggcactaaaataaactttactcatcttatttcataacgcaattgtttacttga 362  Q
    ||||||| | ||||||| ||||||||||| |||||||||||| ||||| ||||||||| |||||||| ||||||||||||||| || |||||||||||||    
T  16062153 ttattttctattatttaatttttatgcacaacaaacctactgtctcggacactaaaat-aactttacacatcttatttcataatgctattgtttacttga 16062055  T
Q  363 gatt 366  Q
    ||||    
T  16062054 gatt 16062051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 21434675 - 21434438
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  ||||| |||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||| || | ||||    
T  21434675 tctaggaatgaataatcgtttatttgttatattaggttaacgttcttaaaaccttcaaataatattagatcacctaaggaattagggactgtaatctgag 21434576  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| |||||||||||| ||     ||| |||||||||||||||   |||| ||| || |||| |||||||  |||||||||| |||||||||||||||    
T  21434575 aagagtgtcttaagtcaatggattgattatggctattttagttaactgtcgtgaaagtagagaagtattcataggaaataggtgtagtgtaccaattagg 21434476  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctc 243  Q
     ||||||| |||||| ||| || ||||||| |||||||    
T  21434475 agaactcataggattcgaatgacctagtctcatctctc 21434438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 17 - 235
Target Start/End: Complemental strand, 27331962 - 27331748
Alignment:
Q  17 attggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagaga 116  Q
    |||| |||||||||  |||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||          |||||||||     
T  27331962 attgaataatcgtttatttgtgatattaggttaacgttgttaaaaccttcaaaaaatattagatcacctaatgaattaggc---------tgagaagagg 27331872  T
Q  117 gtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaact 211  Q
     || |||||||||||     ||||||||||||||||||| |||||| |||||| ||||||||||||  |||||||||||| |||||||||||||| ||||    
T  27331871 ttcctaagtcaagggatttattagggctattttagttaaccatcgtgaaactagagaaatattcataggaaataggtgcattgtaccaattagggaaact 27331772  T
Q  212 cagaggatttgaaagatctagtct 235  Q
    ||||||||| |||||| |||||||    
T  27331771 cagaggattcgaaagacctagtct 27331748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 33 - 245
Target Start/End: Complemental strand, 16055745 - 16055528
Alignment:
Q  33 tttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg- 131  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| || ||||||  | || | ||||||||| ||| |||||||||||     
T  16055745 tttgtgatattaggttaacattcttcaaaccttcaaagaatattagatcacctaaggatttaggggttgtaatctgagaagagggtcctaagtcaaggga 16055646  T
Q  132 ----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaaga 227  Q
        |||||||||||||||||||||||| |||||||| | ||||||||||||||| |||||| ||||||||||||| || || ||| | |||| | ||||    
T  16055645 ttgattagggctattttagttaatcatcataaaactaaaaaaatattcatgagaagtaggtgtagtgtaccaattaaggaaaatcaaatgattcggaaga 16055546  T
Q  228 tctagtctaatctctctc 245  Q
     ||||||| |||||||||    
T  16055545 cctagtctcatctctctc 16055528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 34732559 - 34732340
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  |||||||||||| ||||||||||||||||| |||||||| ||||||| |||||||  ||||||||  | || | ||||    
T  34732559 tctaggaatgaataatcgtttatttgtgatattaagttaacgttcttaaaaccttcaaagagtattagaccacctaacaaattaggggatgtactttgag 34732460  T
Q  111 aagagagtcttaagtcaagg----gttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggg 206  Q
    ||||| ||| ||||||||||    | |||||||||||| ||||| |||||| |||||| ||||  |||| | |||||||  |||||| ||||||||||||    
T  34732459 aagagggtcctaagtcaagggattgatagggctatttt-gttaaccatcgtgaaactagagaatcattcgtaagaaataattgcagtataccaattaggg 34732361  T
Q  207 gaactcagaggatttgaaaga 227  Q
    |||||||||||||| ||||||    
T  34732360 gaactcagaggattcgaaaga 34732340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 54 - 315
Target Start/End: Complemental strand, 34065318 - 34065048
Alignment:
Q  54 tcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg-----ttagggctattttagtt 148  Q
    ||||||||| |||||||| |||||||||||| || | ||||| |||| || ||||||| ||| ||| ||||| ||| |     ||||||||||||  |||    
T  34065318 tcttaaaaccttcaaagattattagatcaccaaaggtattagagactgtaatatgagaggagggtcctaagttaagagattgattagggctatttg-gtt 34065220  T
Q  149 aatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctc--t 246  Q
    || |||||| |||||| | || |||||||  ||||||| |||| |||||||||||||  ||||||||||||| |||||| ||||||| |||||||||  |    
T  34065219 aaccatcgtgaaactagataagtattcataggaaatagatgcattgtaccaattaggaaaactcagaggattcgaaagacctagtctcatctctctccat 34065120  T
Q  247 atcttttataaacaa-ccttattttatgt-tatttactttttatgca-cacaaacctactgcctcgggcact 315  Q
    |||||||  |||||| | ||||||| ||| |||||||| |||||||| |||||||||||||||||| |||||    
T  34065119 atcttttccaaacaatctttattttttgtctatttactgtttatgcagcacaaacctactgcctcgagcact 34065048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 49498695 - 49498458
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  49498695 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 49498597  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||||| ||  |||||| || |||||||||||| |||||||||||    
T  49498596 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactataaaatcattcataag-aataggtgcagtataccaattagg 49498499  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||| ||| |||| |||||| ||| ||| ||||||||||    
T  49498498 ggaacttagatgattcgaaagacctaatctcatctctctct 49498458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 45941341 - 45941577
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  45941341 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 45941440  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    || || ||| ||| |||||||     ||||| ||||||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| |||||||||||    
T  45941441 aaaagggtcctaactcaagggattgattaggactatttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtataccaattagg 45941538  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  45941539 ggaacatagatgattcgaaagacctgatctcatctctct 45941577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 28110983 - 28111219
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaa 112  Q
    ||||| ||||||||||||  || ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||||    
T  28110983 taggaatggataatcgtttgttagtgatattaggttaatgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgagaa 28111082  T
Q  113 gagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagggg 207  Q
    ||| ||| ||| |||||||     ||||| || |||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||||    
T  28111083 gagggtcctaactcaagggattgattaggactgtttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagggg 28111180  T
Q  208 aactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||  ||| |||| |||||||||  ||| ||||||||||    
T  28111181 aacatagatgattcgaaagatctgatctcatctctctct 28111219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 1950653 - 1950420
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| ||| |||| ||||||| ||||||| ||||||||| || |||| ||||    
T  1950653 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcgaagattattagaccacctaaggaattaggggctgtagtttgag 1950555  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||  |||||||||||     ||||| ||||||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| |||||||||||    
T  1950554 aagagggttctaagtcaagggattgattaggactatttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtataccaattagg 1950457  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctct 242  Q
    |||||  ||| |||| |||||| ||||||| ||||||    
T  1950456 ggaacatagatgattcgaaagacctagtctcatctct 1950420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 23022122 - 23021888
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| |||| |||||||||| ||||||||| || | || | ||    
T  23022122 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattatttgatcacctaaggaattaggggctgtggtctaag 23022023  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| |  |  |||||| || |||||||||||| |||||||||||    
T  23022022 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaatatcattcataag-aataggtgcagtataccaattagg 23021925  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctct 242  Q
    |||||| ||| |||| |||||| ||| ||| ||||||    
T  23021924 ggaacttagatgattcgaaagacctaatctcatctct 23021888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 21107489 - 21107254
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||||| ||| |||||| ||||||| || |||| ||||||||| || |||| ||||    
T  21107489 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcttaaacctt-caaagattattagaccatctaaggaattaggggctgtagtttgag 21107391  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||||| ||||||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| |||||||||||    
T  21107390 aagagggtcctaagtcaagggattgattaggactatttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtataccaattagg 21107293  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
     ||||  ||| |||| |||||| ||  ||| ||||||||    
T  21107292 tgaacatagatgattcgaaagacctgatctcatctctct 21107254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 6071152 - 6071032
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| |||||||  ||||||||  | |||| ||||    
T  6071152 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaagaaattaggggatgtagtttgag 6071053  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  6071052 aagagggtcctaactcaaggg 6071032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 21018665 - 21018546
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||||| ||| |||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  21018665 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcttaaacctt-caaagattattagaccacctaaggaattaggggctgtagtttgag 21018567  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| |||||||||||    
T  21018566 aagagggtcataagtcaaggg 21018546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 20398778 - 20398980
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  20398778 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctttaaaccttcaaagattattagaccacctaaggaattaggggttgtagtctgag 20398877  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||  ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  20398878 aagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 20398975  T
Q  206 ggaac 210  Q
    |||||    
T  20398976 ggaac 20398980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 49853276 - 49853159
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  ||  ||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  49853276 tctaggaatggataatcgtttgttattgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 49853178  T
Q  111 aagagagtcttaagtcaag 129  Q
    ||||| ||| |||||||||    
T  49853177 aagagggtcctaagtcaag 49853159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 29643160 - 29643102
Alignment:
Q  264 ttattttatgttatttactttttatgcacacaaacctactgcctcgggcactaaaataa 322  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  29643160 ttattttctgttatttactttttaagcacacaaacctactgcctcggacactaaaataa 29643102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 27536556 - 27536416
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctc--tatcttttataaa-caaccttattttatgttatt 278  Q
    |||||||||||| ||||||||||||||||   || |||| |||||| ||  ||| |||||||||  | ||||||  ||| | | |||||||| |||||||    
T  27536556 aataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatcttattttctgttatt 27536457  T
Q  279 tactttttatgcacacaaacctactgcctcgggcactaaaa 319  Q
    |||||||||||||  |||| |||||||||||||||||||||    
T  27536456 tactttttatgcaatcaaaactactgcctcgggcactaaaa 27536416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 319
Target Start/End: Complemental strand, 37184062 - 37183749
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||| ||||  || |||||||||||||||||| ||| |||| ||| |  | ||||||| ||||||| ||||||||| || |||| ||||    
T  37184062 tctaggaatggataaccgtttgttagtgatattaggttaacgtgctttaaaccttcgagaattattagaccacctaaggaattaggggctgtagtttgag 37183963  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||||||||||| |||||  |||||  ||||| | ||  ||| || |  |||||||||||| |||||||||||    
T  37183962 aagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaaaatcattaat-acgaataggtgcagtataccaattagg 37183865  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatctttt-ataaacaaccttattttatgttatttactttttatgcacacaaacctac 302  Q
    |||||   || |||| |||||| ||  ||| |||||||||  | ||||||   |||| | |||||||| |||||||||   ||||||||  |||| ||||    
T  37183864 ggaacatcgatgattcgaaagacctgatctcatctctctcattgtcttttccaaaactatcttattttctgttattta-aatttatgcaatcaaaactac 37183766  T
Q  303 tgcctcgggcactaaaa 319  Q
    |||||||||||||||||    
T  37183765 tgcctcgggcactaaaa 37183749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 319
Target Start/End: Complemental strand, 45960943 - 45960630
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| ||| |  | ||||||| ||||||| ||||||||| || |||| ||||    
T  45960943 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctttaaaccttcgagaattattagaccacctaaggaattaggggctgtagtttgag 45960844  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     |||| |||||||| |||||  ||||| |||||| | ||  ||| || | ||||||||||| | |||||||||||    
T  45960843 aagagggtcctaactcaagggattgattagagctatttt-gttaactatcgtgaaactagaaaatcattaat-acaaataggtgcattataccaattagg 45960746  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct--ctatctttt-ataaacaaccttattttatgttatttactttttatgcacacaaacctac 302  Q
    |||||   || |||| |||||| ||  ||| ||||||||   | ||||||   |||| | |||||||| |||||||||   ||||||||  |||| ||||    
T  45960745 ggaacatcgatgattcgaaagacctgatctcatctctcttcttgtcttttccaaaactatcttattttctgttattta-aatttatgcaatcaaaactac 45960647  T
Q  303 tgcctcgggcactaaaa 319  Q
    |||||||||||||||||    
T  45960646 tgcctcgggcactaaaa 45960630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 11667153 - 11666981
Alignment:
Q  58 aaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg-----ttagggctattttagttaatc 152  Q
    ||||| |||||| ||||||||| ||||||| ||||||||| || || | |||||||||  || |||||||||||     ||||||||||||| ||||| |    
T  11667153 aaaaccttcaaataatattagaccacctaaggaattaggggctgtaatctgagaagaggatcctaagtcaagggattgattagggctatttt-gttaacc 11667055  T
Q  153 atcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaaga 227  Q
    || || ||| || |||   |||| | ||||||||||||||| ||||||||| ||||| |||||||||| ||||||    
T  11667054 attgtgaaattagagattcattcgtaagaaataggtgcagtataccaatta-gggaaatcagaggattcgaaaga 11666981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 2794153 - 2794256
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||| ||| ||||||||||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  2794153 tctaggaatggataatcctttattagtgatactagcttaacgttctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 2794251  T
Q  111 aagag 115  Q
    |||||    
T  2794252 aagag 2794256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 322
Target Start/End: Complemental strand, 3796851 - 3796708
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctcta--tcttttataaacaaccttattttatgttattt 279  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| |||  || ||||||||||   |||||   |  | | |||||||||||||||||    
T  3796851 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattctttccaactctatcttattttatgttattt 3796752  T
Q  280 actttttatgcaca-caaacctactgcctcgggcactaaaataa 322  Q
    |||||||||||| | |||| ||||||||||  ||||||||||||    
T  3796751 actttttatgcaaaccaaaactactgcctcatgcactaaaataa 3796708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 41058500 - 41058381
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| |||||||| |||  || |||||| ||||||||||| ||| |||| |||||||| |||||||  |||||| ||||||||| || |||| ||||    
T  41058500 tctaggaatggataattgtttgttagtgataataggttaacgtgctt-aaaccttcaaagattattagactacctaaggaattaggggctgtagtttgag 41058402  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  41058401 aagagggtcctaaatcaaggg 41058381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 322
Target Start/End: Complemental strand, 30938629 - 30938444
Alignment:
Q  138 ctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaa 237  Q
    ||||||||||||| |||||| |||||| | ||||||||||   ||||||||| ||| || |||  ||   || |||||||||| ||| |||||  ||| |    
T  30938629 ctattttagttaaccatcgtgaaactagataaatattcatagaaaataggtg-agtatatcaaacagaataaatcagaggattcgaatgatctgatctca 30938531  T
Q  238 tctctctctatcttttataaacaacctt-attttatgtt-atttactttttatgcacacaaacctactgcctcgggcactaaaataa 322  Q
    ||||||  ||| |||| ||||||| ||| || ||  ||| |||||  ||||||||||||||||||||||||||||||| ||||||||    
T  30938530 tctctccatatattttctaaacaagctttatattccgtttatttaacttttatgcacacaaacctactgcctcgggcagtaaaataa 30938444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 27355262 - 27355186
Alignment:
Q  246 tatcttttataaacaaccttattttatgttatttactttttatgcaca-caaacctactgcctcgggcactaaaataa 322  Q
    |||||||| |||||||| ||| ||| | | |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  27355262 tatcttttctaaacaactttaatttctataatttactttt-atgcacaacaaacctactgcctcgggcactaaaataa 27355186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 366
Target Start/End: Complemental strand, 13430246 - 13430163
Alignment:
Q  283 ttttatgcaca-caaacctactgcctcgggcactaaaataaactttactcatcttatttcataacgcaattgtttacttgagatt 366  Q
    ||||||||||| |||||||||| ||| |||||||||||| ||||| || |||| |||||||||| |  |||||||||||||||||    
T  13430246 ttttatgcacaacaaacctactacctggggcactaaaat-aacttgacacatcctatttcataaagttattgtttacttgagatt 13430163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 31204763 - 31204883
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||  || |||| ||| |  | ||||||| ||||||| |||||||||  | |||| ||||    
T  31204763 tctaggaatggataatcgtttgttagtgatattaggttaacgtgttttaaaccttcgagaattattagaccacctaaggaattaggggatgtagtttgag 31204862  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  31204863 aagagggtcctaactcaaggg 31204883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 42022739 - 42022803
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||  |||  ||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  42022739 aataggtgcagcatactgattagaggaactcagaggattcgaaagatctagtctcatctctctct 42022803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 11668224 - 11668173
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaac 62  Q
    ||||||| ||||||||||||  |||||||||||| |||||||||||||||||    
T  11668224 tctaggaatggataatcgtttatttgtgatattaagttaacgttcttaaaac 11668173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 16060581 - 16060513
Alignment:
Q  297 acctactgcctcgggcactaaaataaactttactcatcttatttcataacgcaattgtttacttgagatt 366  Q
    |||| |||||||||||||||| |||| |||||| |||| | |||||||| || |||||||||||||||||    
T  16060581 acctgctgcctcgggcactaatataa-ctttacacatcctgtttcataatgctattgtttacttgagatt 16060513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 3797022 - 3796939
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||| ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  3797022 taggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 3796939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 50196888 - 50196844
Alignment:
Q  264 ttattttatgttatttactttttatgcacacaaacctactgcctc 308  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||    
T  50196888 ttattttctgttatttattttttatgcacacaaacctattgcctc 50196844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 322
Target Start/End: Complemental strand, 27331669 - 27331641
Alignment:
Q  294 caaacctactgcctcgggcactaaaataa 322  Q
    |||||||||||||||||||||||||||||    
T  27331669 caaacctactgcctcgggcactaaaataa 27331641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 29643419 - 29643336
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattag 95  Q
    ||||||| ||||||||| ||  || |||||||||||||||| | ||| |||| ||| |||| ||||||| ||||||| |||||||    
T  29643419 tctaggaatggataatcctttattagtgatattaggttaacatgctt-aaaccttcgaagattattagaccacctaaggaattag 29643336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 1e-81; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 13 - 366
Target Start/End: Complemental strand, 22993882 - 22993525
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaa 112  Q
    ||||| ||||||||||||  ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||| || | ||||||    
T  22993882 taggaatggataatcgtttatttgtgatactaggttaacgttctaaaaaccttcaaagaatattagatcacctaaggaattagggactgtaatttgagaa 22993783  T
Q  113 gagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagggg 207  Q
    ||| ||| |||||||||||     |||||| |||||||||||| ||||||||||||| |||| |||||||   |||||||||||||||||||||||||||    
T  22993782 gagggtcctaagtcaagggattgattagggatattttagttaaccatcgtaaaactagagaagtattcatagtaaataggtgcagtgtaccaattagggg 22993683  T
Q  208 aactcagaggatttgaaagatctagtctaatctctctctatcttttataaacaacctt-attttatgttatttactttttatgca-cacaaacctactgc 305  Q
    |||| |||||||| |||||| ||||||| ||||||||||||||||| |||||||| || ||||| | |||||||| | |||||||  ||||||||  |||    
T  22993682 aacttagaggattcgaaagacctagtctcatctctctctatcttttctaaacaactttaattttctattatttac-tattatgcataacaaacctcttgc 22993584  T
Q  306 ctcgggcactaaaataaactttactcatcttatttcataacgcaattgtttacttgagatt 366  Q
    ||| |||||||||||||  ||||| |||| ||||||||| ||  |||||||| ||||||||    
T  22993583 ctcaggcactaaaataa--tttacacatcctatttcatatcgttattgtttaattgagatt 22993525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 18542559 - 18542912
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||| || | ||||    
T  18542559 tctaggaatggataatcgtttatttgtgatattaggttaacgttcttaaaaccttcaaagaatattagatcacctaagaaattagggactgtaatctgag 18542658  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaata-ggtgcagtgtaccaattag 204  Q
    ||||  |||||||||||||||     ||||| ||||||||||||| |||||| || ||| || | |||||||  |||||| ||||||||| ||||| |||    
T  18542659 aagaaggtcttaagtcaagggattgattaggactattttagttaaccatcgtgaagctagaggagtattcataggaaatagggtgcagtgaaccaaatag 18542758  T
Q  205 gggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaa-caaccttattttatgttatttactttttatgcacacaaacctact 303  Q
    |||||||||||||||| ||||||  |  ||| |||||||| ||| |||| ||||  ||| |||  || ||||||||||||||||||||||||||||||||    
T  18542759 gggaactcagaggattcgaaagacatgatctcatctctctttatattttctaaagaaactttaacttctgttatttactttttatgcacacaaacctact 18542858  T
Q  304 gcctcgggcactaaaataaactttactcatcttatttcataacgcaattgttta 357  Q
    |||||| ||| |||||||||| |||| |||| ||| | ||||||  ||||||||    
T  18542859 gcctcgagcattaaaataaacattacacatcctatataataacgttattgttta 18542912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 17545864 - 17546102
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  ||| ||||| ||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||| | || | ||||    
T  17545864 tctaggaatggataatcgtttatttatgatactaggttaacgtgcttaaaaccttcaaagaatattagctcacctaaggaattagggattgtaatctgag 17545963  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||||||||||||||||||| |||||| |||||| ||||  |||||| ||||||||||||||| |||||||||||    
T  17545964 aagagggtcataagtcaagggattgattagggctattttagttaaccatcgtgaaactagagaatcattcataagaaataggtgcagtataccaattagg 17546063  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc 245  Q
    ||||| |||| |||| |||||||||  ||| |||||||||    
T  17546064 ggaac-cagaagattcgaaagatctgatctcatctctctc 17546102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 3293146 - 3292943
Alignment:
Q  11 tctaggattggataatcgtt-attttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatga 109  Q
    ||||||| || ||||||||| ||||| | |||||| ||||||||||||||||| |||||||||||||||| ||||||| |||||||||  | || |  ||    
T  3293146 tctaggaatgaataatcgtttatttttttatattaagttaacgttcttaaaaccttcaaagaatattagaccacctaaggaattaggggttgtaatcgga 3293047  T
Q  110 gaagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattag 204  Q
    |||| | |||||||||||||||     ||||||||||||| ||||| |||||| |||||||||||  |||||| ||||||||||||| | ||||||||||    
T  3293046 gaagtgggtcttaagtcaagggattgattagggctatttt-gttaaccatcgtgaaactatagaatcattcataagaaataggtgcaatataccaattag 3292948  T
Q  205 gggaa 209  Q
    |||||    
T  3292947 gggaa 3292943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 7486579 - 7486817
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  7486579 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 7486678  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  7486679 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 7486776  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||||    
T  7486777 ggaacatagatgattcgaaagacctgatctcatctctctct 7486817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 2775490 - 2775726
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  2775490 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 2775589  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  2775590 aagagggtcctaattcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 2775687  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  2775688 ggaacatagatgattcgaaagacctgatctcatctctct 2775726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 2778733 - 2778969
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  2778733 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 2778832  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  2778833 aagagggtcctaattcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 2778930  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  2778931 ggaacatagatgattcgaaagacctgatctcatctctct 2778969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 45896389 - 45896625
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  45896389 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 45896488  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  45896489 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 45896586  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  45896587 ggaacatagatgattcgaaagacctgatctcatctctct 45896625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 18644954 - 18644719
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| |||| |||||||  || |||||||||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||| || | ||||    
T  18644954 tctaggaatggacaatcgtttgttagtgatattaggttaacgtgcttaaaaccttcaaagaatattagctcacctaaggaattagggactgtaatctgag 18644855  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  18644854 aagagtgtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 18644757  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctc 243  Q
    |||||   || || | |||||| ||||||| |||||||    
T  18644756 ggaacattgatgactcgaaagacctagtctcatctctc 18644719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 32287509 - 32287271
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||| | |||||||| |||||||| ||||||| ||||||| |||||||||| |||||| ||||    
T  32287509 tctaggaatggataatcgtttattagtgatattaggttaacatacttaaaaccttcaaagattattagaccacctaaggaattagggattatagtttgag 32287410  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| | | ||| |||||||     ||| | ||||||| |||||  |||||  ||||| ||||  |||||| || |||||||||||| |||||||||||    
T  32287409 aagagggccctaactcaagggattgattatgactatttt-gttaactatcgtggaactagagaatcattcataag-aataggtgcagtataccaattagg 32287312  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||||    
T  32287311 ggaacatagatgattcgaaagacctgatctcatctctctct 32287271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 25584688 - 25584921
Alignment:
Q  14 aggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaag 113  Q
    |||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| |||||||  |||||||| || |||| |||||||    
T  25584688 aggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaagaaattaggggctgtagtttgagaag 25584787  T
Q  114 agagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagggga 208  Q
    || ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| ||||||||||||||    
T  25584788 agggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagggga 25584885  T
Q  209 actcagaggatttgaaagatctagtctaatctctct 244  Q
    ||  ||| |||| |||||| ||  ||| ||||||||    
T  25584886 acatagatgattcgaaagacctgatctcatctctct 25584921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 10884866 - 10885099
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||  ||||| ||| | |||| ||||||| ||||||| ||||||||| || |||| ||||    
T  10884866 tctaggaatggataatcgtttgttagtgatattaggttaacgtgtttaaacctt-cgaagattattagaccacctaaggaattaggggctgtagtttgag 10884964  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||  |||||||||||     ||||| ||||||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| |||||||||||    
T  10884965 aagagggttctaagtcaagggattgattaggactatttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtataccaattagg 10885062  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctct 242  Q
    |||||  ||| |||| |||||| ||||||| ||||||    
T  10885063 ggaacatagatgattcgaaagacctagtctcatctct 10885099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 36 - 243
Target Start/End: Complemental strand, 18641933 - 18641723
Alignment:
Q  36 gtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg---- 131  Q
    |||||||||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||| || | ||||||||| ||| ||| |||||||        
T  18641933 gtgatattaggttaacgtgcttaaaaccttcaaagaatattagctcacctaaggaattagggactgtaatctgagaagagtgtcctaactcaagggattg 18641834  T
Q  132 -ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaagatct 230  Q
     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| ||||||||||||||||   || || | |||||| ||    
T  18641833 attaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattaggggaacattgatgactcgaaagacct 18641736  T
Q  231 agtctaatctctc 243  Q
    ||||| |||||||    
T  18641735 agtctcatctctc 18641723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 315
Target Start/End: Complemental strand, 282377 - 282071
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| |||||||| |||  || ||||||||| || |||||||||||||| ||| |||||||||||||||||||| |||||||  | | || | ||||    
T  282377 tctaggaatggataattgtttattggtgatattatgtcaacgttcttaaaaccttcgaagaatattagatcacctaaggaattagtaattgtaatctgag 282278  T
Q  111 aagagagtcttaagtcaa----gggttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggg 206  Q
    ||||| ||  ||||||||     | ||||  |||||||| |||| ||||||||||||| || ||||||||| ||| ||||||||||| ||||||  ||      
T  282277 aagagggttctaagtcaatgattgattagaactattttaattaaccatcgtaaaactagaggaatattcataagacataggtgcagtttaccaaacagta 282178  T
Q  207 gaactcagaggatttgaaagatctagtctaatctctctctatcttttataaacaaccttattttatgttatttactttttatgcacacaaacctactgcc 306  Q
     || ||||||||||  ||||| ||| ||| |||||| | ||| ||||  |||||| ||| | |||  |||| |||| ||||||||  |||||||||||||    
T  282177 taaatcagaggattcaaaagacctaatctcatctct-tttatattttcaaaacaa-cttttattagcttatctactatttatgcaatcaaacctactgcc 282080  T
Q  307 tcgggcact 315  Q
    | |||||||    
T  282079 tagggcact 282071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 54461048 - 54461143
Alignment:
Q  36 gtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg 131  Q
    |||||||||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||| || ||||||||||| ||| ||| |||||||    
T  54461048 gtgatattaggttaacgtgcttaaaaccttcaaagaatattagctcacctaaggaattagggactgtaatatgagaagagggtcctaactcaaggg 54461143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 16243882 - 16244117
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| | ||||||||||  || |||||||||||||||| | |||||| ||| |||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  16243882 tctaggaatagataatcgtttgttagtgatattaggttaacatgcttaaacctt-caaagattattagaacacctaaggaattaggggctgtagtttgag 16243980  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| |||||||||||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  16243981 aagagggtcttaagtcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 16244078  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  16244079 ggaacatagatgattcgaaagacctgatctcatctctct 16244117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 29344060 - 29343824
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||| ||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  29344060 tctaggaatgaataatcttttattagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 29343961  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||| | |||||||||||    
T  29343960 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcaatataccaattagg 29343863  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  29343862 ggaacatagatgattcgaaagacctgatctcatctctct 29343824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 52199922 - 52200156
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||| | ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  52199922 tctaggaatggataatcgtttgttagtgatattaggttaacatgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 52200020  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||| |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  52200021 aagagggtcctaattcaagggattgattaggactatttt-gttaattatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 52200118  T
Q  206 ggaac-tcagaggatttgaaagatctagtctaatctctc 243  Q
    ||||| ||| | |||| |||||| ||||||| |||||||    
T  52200119 ggaacatca-atgattcgaaagacctagtctcatctctc 52200156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 243
Target Start/End: Original strand, 35412526 - 35412753
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || |||||||||||||||||| |||||||| ||||||||||||||| | |||||| |||||||||||| || | ||||||||| ||    
T  35412526 tggataatcgtttgttagtgatattaggttaacgtgcttaaaaccttcaaagaatattagctaacctaaggaattagggactgtaatctgagaagagggt 35412625  T
Q  119 cttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactca 213  Q
    | ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||| |||||       
T  35412626 cctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagaggaacatt 35412723  T
Q  214 gaggatttgaaagatctagtctaatctctc 243  Q
    || || | |||||| ||||||| |||||||    
T  35412724 gatgactcgaaagacctagtctcatctctc 35412753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 538843 - 538955
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    |||||| |||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||||||| ||    
T  538843 tggatattcgtttgttagtgatattaggttaacgttcttaaaacattcaaagattattagaccacctaaggaattaggggctgtagtttgagaagagggt 538942  T
Q  119 cttaagtcaaggg 131  Q
    | ||| |||||||    
T  538943 cctaactcaaggg 538955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 43809588 - 43809708
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||| ||  || ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||  | |||| ||||    
T  43809588 tctaggaatgaataatcctttattagtgatattaggttaacgttcttaaaaccttcaaagaatattagaccacctaaggaattagggggtgtagtttgag 43809687  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  43809688 aagagggtcctaactcaaggg 43809708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 37 - 319
Target Start/End: Original strand, 47051530 - 47051818
Alignment:
Q  37 tgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg----- 131  Q
    ||||||||||||||||| ||| |||| ||| |  | ||||||| ||||||  ||||||||| || |||| ||||||||| ||| ||| |||||||         
T  47051530 tgatattaggttaacgtgctttaaaccttcgagaattattagaccacctatggaattaggggctgtagtttgagaagagggtcctaactcaagggattga 47051629  T
Q  132 ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaagatcta 231  Q
    |||| |||||||| |||||  |||||  ||||| | ||  ||| ||  ||| |||||||||| ||||| ||||||||||  ||| |||| |||||| ||     
T  47051630 ttagagctatttt-gttaactatcgtggaactagaaaatcattaatacgaa-taggtgcagtataccagttaggggaacatagatgattcgaaagacctg 47051727  T
Q  232 gtctaatctctctc--tatcttttataaa-caaccttattttatgttatttactttttatgcacacaaacctactgcctcgggcactaaaa 319  Q
     ||| |||||||||  | ||||||  ||| | | |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47051728 atctcatctctctcattgtcttttccaaaactatcttattttctgttatttactttttatgcacaccaacctactgcctcgggcactaaaa 47051818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 49743103 - 49742985
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaa 112  Q
    ||||| |||||||||||   || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||||    
T  49743103 taggaatggataatcgtctgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggttgtagtttgagaa 49743004  T
Q  113 gagagtcttaagtcaaggg 131  Q
    ||| ||| ||| |||||||    
T  49743003 gagggtcctaactcaaggg 49742985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 10881489 - 10881605
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||||| ||| |||||| ||||||| ||| ||| ||||||||| || |||| ||||    
T  10881489 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcttaaacctt-caaagattattagaccacttaaggaattaggggctgtagtttgag 10881587  T
Q  111 aagagagtcttaagtcaa 128  Q
    ||||| ||||||||||||    
T  10881588 aagagggtcttaagtcaa 10881605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 19301690 - 19301456
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| |||||| ||| |||||| ||||| | |||||||  ||||||||  | |||| ||||    
T  19301690 tctaggaatggataatcttttgttagtgatattaggttaacgtgcttaaacctt-caaagattattaaaccacctaagaaattaggggttgtagtttgag 19301592  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||  ||||||| |||||  |||||| ||||| | ||  |||||| |||| ||||||||||||| ||| || |    
T  19301591 aagagggtcctaactcaagggatttattagaactatttt-gttaactatcgtagaactagaaaatcattcataagaa-taggtgcagtgtagcaaatacg 19301494  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctc 243  Q
    ||||||||||||||| |||||| ||||||| |||||||    
T  19301493 ggaactcagaggattcgaaagacctagtctcatctctc 19301456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 43926844 - 43927062
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  43926844 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 43926942  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  ||| |  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  43926943 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcatggaactagaaaatcattcataag-aataggtgcagtataccaattagg 43927040  T
Q  206 ggaactcagaggatttgaaaga 227  Q
    |||||  ||| |||| ||||||    
T  43927041 ggaacatagatgattcgaaaga 43927062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 2873581 - 2873810
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||||||| ||    
T  2873581 tggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgagaagagggt 2873679  T
Q  119 cttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactca 213  Q
    | ||| |||||||     ||||| ||||||| |||||  |||||  || || | ||  |||||| || |||||||||||| ||||||||||||||||  |    
T  2873680 cctaactcaagggattgattaggactatttt-gttaactatcgtggaattagaaaatcattcataag-aataggtgcagtataccaattaggggaacata 2873777  T
Q  214 gaggatttgaaagatctagtctaatctctctct 246  Q
    || |||| |||||| ||  ||| ||||||||||    
T  2873778 gatgattcgaaagacctgatctcatctctctct 2873810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 16184873 - 16184671
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| | ||    
T  16184873 tctaggaatggataatcttttattagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttaag 16184774  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    || |  ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  16184773 aaaaaggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 16184676  T
Q  206 ggaac 210  Q
    |||||    
T  16184675 ggaac 16184671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 24125508 - 24125745
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||| | ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  24125508 tctaggaatggataatcgtttgttagtgatattaggttaacatgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 24125606  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  24125607 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 24125704  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    | |||  ||| |||| |||||| ||  ||| ||||||||||    
T  24125705 gaaacatagatgattcgaaagacctgatctcatctctctct 24125745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 24128785 - 24129022
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||| | ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  24128785 tctaggaatggataatcgtttgttagtgatattaggttaacatgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 24128883  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  24128884 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 24128981  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    | |||  ||| |||| |||||| ||  ||| ||||||||||    
T  24128982 gaaacatagatgattcgaaagacctgatctcatctctctct 24129022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 53815837 - 53816074
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||| ||||||||||||||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  53815837 tctaggaatggataatcctttattagtgatactaggttaacgttctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 53815935  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||  ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  53815936 aagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 53816033  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||||    
T  53816034 ggaacatagatgattcgaaagacctgatctcatctctctct 53816074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 243
Target Start/End: Complemental strand, 19304848 - 19304640
Alignment:
Q  37 tgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg----- 131  Q
    |||| |||||||||||| |||||| ||| |||||| ||||||| ||||||| |||||||||  | |||| ||||||||| ||| ||| ||| |||         
T  19304848 tgatgttaggttaacgtgcttaaacctt-caaagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcgtaactcaggggattga 19304750  T
Q  132 ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaagatcta 231  Q
    ||| | ||||||| |||||  |||||  ||||| | ||  |||||| |||| |||||||||||||||||  ||||||||||||||||||||||||| |||    
T  19304749 ttatgactatttt-gttaactatcgtggaactagaaaatcattcataagaa-taggtgcagtgtaccaagcaggggaactcagaggatttgaaagaccta 19304652  T
Q  232 gtctaatctctc 243  Q
    |||| |||||||    
T  19304651 gtctcatctctc 19304640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 28008255 - 28008019
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||| ||| |  |||| |||| ||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  28008255 tctaggaatggataatcgtttattagtgataatagat--acgtacttacaacattcaaagattattagaccacctaaggaattaggggctgtagtttgag 28008158  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  ||||| |||||| ||||  |||||| |||| |||||||||| ||| |||| ||    
T  28008157 aagagggtcataactcaagggattgattaggactatttt-gttaactatcgtgaaactagagaataattcataagaa-taggtgcagtatacaaatttgg 28008060  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||| ||| ||||||||||    
T  28008059 ggaacatagatgattcgaaagacctaatctcatctctctct 28008019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 3840525 - 3840629
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || ||||||||||||||||||||||||||| |||||||| ||||||| || |||| |||||||||  | |||| ||||    
T  3840525 tctaggaatggataatcctttattagtgatattaggttaacgttcttaaaaccttcaaagattattagaccatctaaggaattaggggttgtagtttgag 3840624  T
Q  111 aagag 115  Q
    |||||    
T  3840625 aagag 3840629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 23298801 - 23298681
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||| ||||||||||| || ||||| | ||||| |||||||  |||||||| || |||| ||||    
T  23298801 tctaggaatggataatcgtttgttggtgatattaggttaatgttcttaaaaccttgaaagattcttagaccacctaagaaattaggggctgtagtttgag 23298702  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  23298701 aagagggtcctaactcaaggg 23298681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 28265880 - 28266011
Alignment:
Q  5 gattattctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatag 104  Q
    ||||| ||||||| ||||||||| ||  || |||||| |||||||||||||||||| ||| |||||| ||||||| ||||||| ||||||||| || |||    
T  28265880 gattagtctaggaatggataatcttttattagtgatactaggttaacgttcttaaacctt-caaagattattagaccacctaaggaattaggggctgtag 28265978  T
Q  105 tatgagaagagagtcttaagtcaagggttaggg 137  Q
    | ||||||||| ||  ||  |||||||||||||    
T  28265979 tttgagaagagggttctatctcaagggttaggg 28266011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 243
Target Start/End: Complemental strand, 55035052 - 55034807
Alignment:
Q  5 gattattctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatag 104  Q
    ||||| ||||||| ||||||||||||  || |||||||||||||||||| | |||||| |||||||| || || | ||||||| |||||||||  | |||    
T  55035052 gattagtctaggaatggataatcgtttgttagtgatattaggttaacgtgcataaaaccttcaaagattactaaaccacctaaggaattaggggatgtag 55034953  T
Q  105 tatgagaagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgaga---aataggtgcagtgta 196  Q
    | |||||||||  |  ||| |||||||     ||||| ||||||| |||||  |||||  ||||| ||||  |||||| |||   |||||||||||| ||    
T  55034952 tttgagaagaggattctaactcaagggattgattaggactatttt-gttaactatcgtggaactagagaatcattcataagaatgaataggtgcagtata 55034854  T
Q  197 ccaattaggggaactcagaggatttgaaagatctagtctaatctctc 243  Q
    ||||||||||||||   || |||| |||||| ||||||| |||||||    
T  55034853 ccaattaggggaacatcgatgattcgaaagacctagtctcatctctc 55034807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 253
Target Start/End: Complemental strand, 8461672 - 8461428
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||| |||||||||||| || |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  8461672 tctaggaatggataatcctttattagtgatactaggttaacgtt-tttaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 8461574  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    |||||  |  ||| |||||||     ||||| ||||||| |||||  ||| |  ||||||||||  |||||  || |||||||||||| |||||||||||    
T  8461573 aagaggatactaaatcaagggattgattaggactatttt-gttaactatcatggaactatagaatcattcacaag-aataggtgcagtataccaattagg 8461476  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatctttt 253  Q
    | |||  ||| |||| |||||| ||| ||| |||||||| ||||||||    
T  8461475 gaaacatagatgattcgaaagacctaatctcatctctctttatctttt 8461428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 20728832 - 20728597
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || ||||||||||||||| || |||||| ||| |||||| ||||||| ||||||| ||||||| | || |||| ||||    
T  20728832 tctaggaatggataatcttttgttagtgatattaggttaatgtgcttaaacctt-caaagattattagaccacctaaggaattagaggctgtagtttgag 20728734  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||||||||||||| |||||  ||| |  ||||| | ||  |||||| || |||| ||||||| |||||||||||    
T  20728733 aagagggtcctaagtcaagggattgattagggctatttt-gttaaatatcatcgaactagaaaatcattcataag-aatatgtgcagtataccaattagg 20728636  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  20728635 ggaacatagatgattcgaaagacctgatctcatctctct 20728597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 285
Target Start/End: Original strand, 22783604 - 22783889
Alignment:
Q  7 ttattctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttc-aaagaatattagatcacctaatgaattagggac--tata 103  Q
    ||||||||||  || |||||||||  |||||||||||| ||||||||||||||||| ||| ||| ||||||| | ||||||| ||||||||| |  ||||    
T  22783604 ttattctaggtatgcataatcgtttatttgtgatattaagttaacgttcttaaaaccttcaaaaaaatattataccacctaaggaattaggggctatata 22783703  T
Q  104 gtatgagaagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtacc 198  Q
     | ||||||||| ||| |||||||||||     ||||| ||||| | |||||  ||||| |||||| ||||  |||||| || |||| |||  |||| ||    
T  22783704 atctgagaagagggtcctaagtcaagggatttattaggactattat-gttaactatcgtgaaactagagaatcattcataag-aatatgtgatgtgtgcc 22783801  T
Q  199 aattaggggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaac--aaccttattttatgttatttactttt 285  Q
    |||||||||||  ||||||||| |||||| ||  ||| ||||||||| || |||| ||| |  | | ||||||||||||||||| ||||    
T  22783802 aattaggggaa-acagaggattcgaaagacctgatctcatctctctccatattttctaatccaatctttattttatgttatttaatttt 22783889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 285
Target Start/End: Original strand, 22787968 - 22788253
Alignment:
Q  7 ttattctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttc-aaagaatattagatcacctaatgaattagggac--tata 103  Q
    ||||||||||  || |||||||||  |||||||||||| ||||||||||||||||| ||| ||| ||||||| | ||||||| ||||||||| |  ||||    
T  22787968 ttattctaggtatgcataatcgtttatttgtgatattaagttaacgttcttaaaaccttcaaaaaaatattataccacctaaggaattaggggctatata 22788067  T
Q  104 gtatgagaagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtacc 198  Q
     | ||||||||| ||| |||||||||||     ||||| ||||| | |||||  ||||| |||||| ||||  |||||| || |||| |||  |||| ||    
T  22788068 atctgagaagagggtcctaagtcaagggatttattaggactattat-gttaactatcgtgaaactagagaatcattcataag-aatatgtgatgtgtgcc 22788165  T
Q  199 aattaggggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaac--aaccttattttatgttatttactttt 285  Q
    |||||||||||  ||||||||| |||||| ||  ||| ||||||||| || |||| ||| |  | | ||||||||||||||||| ||||    
T  22788166 aattaggggaa-acagaggattcgaaagacctgatctcatctctctccatattttctaatccaatctttattttatgttatttaatttt 22788253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 30220186 - 30219972
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttc---ttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagag 115  Q
    ||||||||||||  |||||||||||| ||||||  ||   ||||||  |||||||||||||||| ||||||| |||||||||  || | | |  ||||||    
T  30220186 tggataatcgtttatttgtgatattaagttaactatcaacttaaaagcttcaaagaatattagaccacctaaggaattaggggttacaatctatgaagag 30220087  T
Q  116 agtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaac 210  Q
     ||| |||||||||||     ||||||||||||| |||||  ||||| |||||| ||||  |||||| |||| ||||||||||  |||||||||||||||    
T  30220086 ggtcctaagtcaagggattgattagggctatttt-gttaactatcgtgaaactagagaatcattcataagaa-taggtgcagttgaccaattaggggaac 30219989  T
Q  211 tcagaggatttgaaaga 227  Q
    | ||| |||| ||||||    
T  30219988 ttagatgattcgaaaga 30219972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 31549188 - 31549392
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || |||||| ||||||||| ||| |||||| |||||||| ||||||| |||||||  |||||||| || |||| | ||||||| ||    
T  31549188 tggataatcgtttattagtgataataggttaacattcataaaaccttcaaagattattagaccacctaagaaattagggtctgtagttttagaagagggt 31549287  T
Q  119 cttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactca 213  Q
    | |||||||||||     ||| | ||||||| |||||  |||||  ||||| | || ||||||| || |||||||||||| |||||||||||| |||| |    
T  31549288 cctaagtcaagggattgattatgactatttt-gttaactatcgtggaactagaaaattattcataag-aataggtgcagtataccaattagggaaactta 31549385  T
Q  214 gaggatt 220  Q
    || ||||    
T  31549386 gatgatt 31549392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 6434963 - 6434726
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||| ||  || |||||| ||||||||||||||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  6434963 tctaggaatgaataatcctttattagtgatactaggttaacgttctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 6434865  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||  ||  |||||||     ||| | ||||||| |||||  |||||  ||||| | ||  |||||| | ||||||||||||| |||||||||||    
T  6434864 aagagggttctatctcaagggattgattatgactatttt-gttaactatcgtggaactagaaaatcattcat-aaaaataggtgcagtataccaattagg 6434767  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||| ||| ||||||||||    
T  6434766 ggaacatagatgattcgaaagacctaatctcatctctctct 6434726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 9392743 - 9392862
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||| ||||||| ||| |||| |||||||| ||||||| ||| ||| ||||||||| ||| ||| ||||    
T  9392743 tctaggaatggataatcgtttgttagtgatattagtttaacgtgctt-aaaccttcaaagattattagaccacttaaggaattaggggctagagtttgag 9392841  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  9392842 aagagggtcctaactcaaggg 9392862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 17040207 - 17040104
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| |||||||| |||  || |||||||||||||||||| ||| |||| |||||||| |||||||||| |||| ||||||||| || |||| ||||    
T  17040207 tctaggaatggataattgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagatcatctaaggaattaggggctgtagtttgag 17040109  T
Q  111 aagag 115  Q
    |||||    
T  17040108 aagag 17040104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 30690745 - 30690864
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||  | || | ||||    
T  30690745 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggttgtaatttgag 30690843  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  30690844 aagagggtcctaactcaaggg 30690864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 35751449 - 35751569
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  ||  ||||||||||||||||| |||||||  |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  35751449 tctaggaatgaataatcgtttgttaatgatattaggttaacgtgcttaaaatcttcaaagattattagaccacctaaggaattaggggttgtagtttgag 35751548  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  35751549 aagagggtcctaactcaaggg 35751569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 54723750 - 54723854
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  ||  ||||||||||||||||| | |||||| |||||||| ||||||| ||||||| ||| ||||| || |||| ||||    
T  54723750 tctaggaatggataatcgtttgttaatgatattaggttaacgtgcataaaaccttcaaagattattagaccacctaaggaaataggggctgtagtttgag 54723849  T
Q  111 aagag 115  Q
    |||||    
T  54723850 aagag 54723854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 10106784 - 10106588
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| |||| | ||| |||| | ||||||| ||||||| ||||||||| || |||| ||||    
T  10106784 tctaggaatggataatcatttgttagtgatattaggttaacgtgcttacacctt-caaatattattagaccacctaaggaattaggggctgtagtttgag 10106686  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||  |||||||||||     ||||| ||||||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| |||||||||||    
T  10106685 aagagggttctaagtcaagggattgattaggactatttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtataccaattagg 10106588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 319
Target Start/End: Complemental strand, 50461734 - 50461421
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  || ||||||||||||||| || ||| |||| ||| |  | ||||||| ||||||| ||||||||| || |||| ||||    
T  50461734 tctaggaatgaataatcgtttgttagtgatattaggttaatgtgctttaaaccttcgagaattattagaccacctaaggaattaggggctgtagtttgag 50461635  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||||||||||| |||||  |||||  ||||| | ||  ||| || |  |||||||||||| |||||||||||    
T  50461634 aagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaaaatcattaat-acgaataggtgcagtataccaattagg 50461537  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatctttt-ataaacaaccttattttatgttatttactttttatgcacacaaacctac 302  Q
    |||||   || |||| |||||| ||  ||| |||||||||  | ||||||   |||| | |||||||| |||||||||   ||||||||  |||| ||||    
T  50461536 ggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatcttattttctgttattta-aatttatgcaatcaaaactac 50461438  T
Q  303 tgcctcgggcactaaaa 319  Q
    |||||||||||||||||    
T  50461437 tgcctcgggcactaaaa 50461421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 243
Target Start/End: Complemental strand, 55032183 - 55031947
Alignment:
Q  14 aggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaag 113  Q
    |||| ||||||||||||  |  |||||||||||||||||| | |||||  |||||||| || |||| ||||||| |||| ||||  | |||| |||||||    
T  55032183 aggaatggataatcgtttgtcagtgatattaggttaacgtgcataaaagcttcaaagattactagaccacctaaggaatcaggggatgtagtttgagaag 55032084  T
Q  114 agagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaa---ataggtgcagtgtaccaattagg 205  Q
    || ||  ||| |||||||     ||||| ||||||| |||||  |||||  ||||| ||||  |||||| ||||   ||||||||||| |||||||||||    
T  55032083 agggttctaactcaagggattgattaggactatttt-gttaactatcgtggaactagagaatcattcataagaatgaataggtgcagtataccaattagg 55031985  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctc 243  Q
    |||||   || |||| |||||| ||||||| |||||||    
T  55031984 ggaacatcgatgattcgaaagacctagtctcatctctc 55031947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 32367314 - 32367229
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  32367314 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 32367229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 41977018 - 41977127
Alignment:
Q  5 gattattctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatag 104  Q
    ||||| |||| || ||||||||||||  || |||||||||||||||| | ||| |||| |||||||| ||||||| ||||||| |||||||||  | |||    
T  41977018 gattagtctatgaatggataatcgtttgttagtgatattaggttaacatgctt-aaaccttcaaagattattagaccacctaaggaattaggggttgtag 41977116  T
Q  105 tatgagaagag 115  Q
    | |||||||||    
T  41977117 tttgagaagag 41977127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 2279548 - 2279507
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  2279548 ttatttactttttatgcacacaaacctactgcctcaggcact 2279507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 10963594 - 10963635
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  10963594 ttatttactttttatgcacacaaacctactgcctcaggcact 10963635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 10967103 - 10967144
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  10967103 ttatttactttttatgcacacaaacctactgcctcaggcact 10967144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 27091903 - 27092007
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||  |||||||||| |||||||| |||||||| ||||||| | |||||  ||||||||  | |||| ||||    
T  27091903 tctaggaatggataatcgtttattagtgataaaaggttaacgtacttaaaaccttcaaagattattagaccgcctaagaaattaggggatgtagtttgag 27092002  T
Q  111 aagag 115  Q
    |||||    
T  27092003 aagag 27092007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 47055192 - 47055248
Alignment:
Q  263 cttattttatgttatttactttttatgcacacaaacctactgcctcgggcactaaaa 319  Q
    |||||||| |||| |||| ||||||||||||| |||||||||||| |||||||||||    
T  47055192 cttattttctgttctttagtttttatgcacaccaacctactgccttgggcactaaaa 47055248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 54736142 - 54736095
Alignment:
Q  264 ttattttatgttatttactttttat-gcacacaaacctactgcctcgg 310  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  54736142 ttattttctgttatttactttttattgcacacaaacctactgcctcgg 54736095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 12561419 - 12561334
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  12561419 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 12561334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 22417019 - 22416934
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  22417019 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 22416934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 10960087 - 10960128
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  10960087 ttatttactttttatgcacacaaacctactacctcaggcact 10960128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 52988414 - 52988498
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagg 96  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||||||||| |  ||||||| ||||||| ||||||||    
T  52988414 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaactttcaacggttattagaccacctaaggaattagg 52988498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 15195487 - 15195404
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattag 95  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| ||| |||| ||||||| ||||||| |||||||    
T  15195487 tctaggaatggataatcttttattagtgatattaggttaacgtgctt-aaaccttcgaagattattagaccacctaaggaattag 15195404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 27308198 - 27308154
Alignment:
Q  21 gataatcgttattttgtgatattaggttaacgttcttaaaacttt 65  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||    
T  27308198 gataatcgtttatttgtgttattaggttaacgttcttaaaacttt 27308154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 27308771 - 27308720
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaac 62  Q
    ||||||| | |||||||| |  ||||||||||||||||||||||||||||||    
T  27308771 tctaggaatagataatcgcttatttgtgatattaggttaacgttcttaaaac 27308720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 308
Target Start/End: Complemental strand, 25888400 - 25888366
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctc 308  Q
    ||||||| |||||||||||||||||||||||||||    
T  25888400 ttatttattttttatgcacacaaacctactgcctc 25888366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 308
Target Start/End: Complemental strand, 30157956 - 30157926
Alignment:
Q  278 ttactttttatgcacacaaacctactgcctc 308  Q
    |||||||||||||||||||||||||||||||    
T  30157956 ttactttttatgcacacaaacctactgcctc 30157926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 46884958 - 46885035
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  46884958 tggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaacacctaaggaattaggg 46885035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 47054960 - 47055054
Alignment:
Q  37 tgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg 131  Q
    ||||||||||||||||| ||| |||| ||| |  | ||||||| ||||||  ||||||||| || |||| ||||||||| ||| ||| |||||||    
T  47054960 tgatattaggttaacgtgctttaaaccttcgagaattattagaccacctatggaattaggggctttagtttgagaagagggtcctaactcaaggg 47055054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 54719980 - 54720065
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| ||||| |  ||||||| ||||||| |||||||||    
T  54719980 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaacggttattagaccacctaaggaattaggg 54720065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 2784306 - 2784347
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    |||| |||||||||| ||||||||||||||||||| ||||||    
T  2784306 ttatatactttttatacacacaaacctactgcctcaggcact 2784347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 11190560 - 11190621
Alignment:
Q  36 gtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    |||||||||||||||||| | |||||| |||||  | ||||||| ||||||| |||||||||    
T  11190560 gtgatattaggttaacgtgcataaaaccttcaagaattattagaccacctaaggaattaggg 11190621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 28266098 - 28266163
Alignment:
Q  181 aaataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    ||||||||||||| ||||||||||||||||  ||| |||| |||||| ||  ||| ||||||||||    
T  28266098 aaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 28266163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 44508934 - 44508967
Alignment:
Q  282 tttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||||||||||| ||||||    
T  44508934 tttttatgcacacaaacctactgcctcaggcact 44508967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 4250575 - 4250627
Alignment:
Q  264 ttattttatgttatttactttttat-gcacacaaacctactgcctcgggcact 315  Q
    ||||||| |||||||||| |||||| ||||||||||||||||| || ||||||    
T  4250575 ttattttctgttatttacattttattgcacacaaacctactgcttcaggcact 4250627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 6922702 - 6922766
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| ||  ||| ||||||||||    
T  6922702 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 6922766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 18883401 - 18883453
Alignment:
Q  264 ttattttatgttatttactttttatg-cacacaaacctactgcctcgggcact 315  Q
    ||||||| |||||||||| ||||||  ||||||||||||||||||| ||||||    
T  18883401 ttattttctgttatttaccttttatttcacacaaacctactgcctcaggcact 18883453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 23298627 - 23298563
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||  ||||||||| ||||||| ||| |||| |||||| ||| ||| ||||||||||    
T  23298627 aataggtgcagcataccaattaagggaacttagatgattcgaaagacctaatctcatctctctct 23298563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 37408863 - 37408927
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| |||  || ||||||||||    
T  37408863 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 37408927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 3e-76; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 19 - 366
Target Start/End: Complemental strand, 37739953 - 37739600
Alignment:
Q  19 tggataatcgttattttgtgatatta---ggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagag 115  Q
    ||||||||||||  ||||||||||||   |||||| |||  |||||| |||||||| ||||||||||||||| |||||||||||  || | ||| |||||    
T  37739953 tggataatcgtttatttgtgatattattaggttaatgtttgtaaaaccttcaaagattattagatcacctaaggaattagggacagtaatctgataagag 37739854  T
Q  116 agtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaac 210  Q
     ||| |||||||||||     ||||||||||||||| ||| |||||| |||||| |||||||||||| ||| |||||||||||||||||||||| |||||    
T  37739853 ggtcctaagtcaagggattgattagggctattttagctaaccatcgtgaaactagagaaatattcataagacataggtgcagtgtaccaattagaggaac 37739754  T
Q  211 tcagaggatttgaaagatctagtctaatctctctctatcttttataaacaaccttattttatgttatttactttttatgcacaca-aacctactgcctcg 309  Q
    || || |||| |||||| ||||||   |||| ||||||||||| |||||||| ||||||| || || ||||||||||||| || | |||||||||||||     
T  37739753 tctgatgattcgaaagacctagtc---tctccctctatcttttctaaacaactttattttctgctacttactttttatgcgcaaagaacctactgcctca 37739657  T
Q  310 ggcactaaaataaactttactcatcttatttcataacgcaattgtttacttgagatt 366  Q
    |||||||||||||||||||| |||| ||||||||| ||| |||||||||||||||||    
T  37739656 ggcactaaaataaactttacacatcctatttcatatcgctattgtttacttgagatt 37739600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 322
Target Start/End: Complemental strand, 22172565 - 22172255
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  |||| ||||||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||| || | ||||||||| ||    
T  22172565 tggataatcgtttatttgcgatattaggttaacgttcttaaaaccttcgaagaatattagttcacctaaggaattagggactgtaatctgagaagagggt 22172466  T
Q  119 cttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactca 213  Q
    | |||||||||||     ||| |||||||||||||||  ||||| ||| || ||||||||| ||  | ||||||| |||||| |||| ||||  ||||||    
T  22172465 cctaagtcaagggattgattatggctattttagttaactatcgttaaattagagaaatatttatagggaataggtacagtgtgccaaataggaaaactca 22172366  T
Q  214 gaggatttgaaagatctagtctaatctctctctatcttttataaacaa-ccttattttatgt-tatttactttttatgcacac-aaacctactgcctcgg 310  Q
    |||||||  ||||| ||||||| |||||||| ||||||||  ||| || | |||||||  || |||||||  ||||||||||| |||| |||||||||||    
T  22172365 gaggattcaaaagacctagtctcatctctctatatcttttccaaaaaatctttattttccgtctatttac-atttatgcacacaaaacatactgcctcgg 22172267  T
Q  311 gcactaaaataa 322  Q
    ||||||||||||    
T  22172266 gcactaaaataa 22172255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 53094430 - 53094648
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  ||| |||||||| |||||||||| |||||| |||||||| ||||||| ||||||| || ||||||  | || ||||||    
T  53094430 tctaggaatggataatcgtttatttctgatattaagttaacgttcataaaacattcaaagagtattagaccacctaaggagttaggggttgtactatgag 53094529  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||||| ||||||| |||||||||||| |||||| ||||  |||| | ||||||||||||||| |||||||||||    
T  53094530 aagagggtcctaagtcaagggattgattaggcctatttt-gttaatcatcgtgaaactagagaatcattcgtaagaaataggtgcagtataccaattagg 53094628  T
Q  206 ggaactcagaggatttgaaa 225  Q
    |||||| |||||||||||||    
T  53094629 ggaacttagaggatttgaaa 53094648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 245
Target Start/End: Complemental strand, 8877700 - 8877462
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  |||||||||||| |||||| |||||||||| |||||||||||||||| |||||||  ||||||||  | |  |  |||    
T  8877700 tctaggaatggataatcgtttatttgtgatattaagttaacattcttaaaaccttcaaagaatattagaccacctaagaaattaggggttgtgatcggag 8877601  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||||||| |||||||||||     ||||||||||||| ||||| |||||| |||||| |||   |||||| ||||||||||||||| ||| || ||||    
T  8877600 aagagagtcctaagtcaagggattgattagggctatttt-gttaaccatcgtgaaactagagagtcattcataagaaataggtgcagtatactaaatagg 8877502  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc 245  Q
    |||||| ||| ||||||||||| ||  ||| |||||||||    
T  8877501 ggaacttagatgatttgaaagacctgatctcatctctctc 8877462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 319
Target Start/End: Complemental strand, 34320116 - 34319802
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  34320116 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaactttcaaagattattagaccacctaaggaattaggggctttagtttgag 34320017  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||||||||||| |||||  |||||  || || | ||  ||| || |  |||||||||||| ||||||||| |    
T  34320016 aagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaattagaaaatcattaat-acgaataggtgcagtataccaattaag 34319919  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatctttt-ataaacaaccttattttatgttatttactttttatgcacacaaacctac 302  Q
    |||||   || |||| |||||| ||  ||| |||||||||  | ||||||   |||| | |||||||| ||||||||||||||||||||  |||| ||||    
T  34319918 ggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatcttattttctgttatttactttttatgcaatcaaaactac 34319819  T
Q  303 tgcctcgggcactaaaa 319  Q
    || ||||||||||||||    
T  34319818 tgtctcgggcactaaaa 34319802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 33 - 227
Target Start/End: Complemental strand, 33408494 - 33408297
Alignment:
Q  33 tttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg- 131  Q
    |||||||||||| |||||||||| |||||| |||||||| ||||||| ||||||| |||||||||  |||||| ||||||||| ||| |||||||||||     
T  33408494 tttgtgatattaagttaacgttcgtaaaaccttcaaagattattagaccacctaaggaattaggggttatagtttgagaagagggtcctaagtcaaggga 33408395  T
Q  132 ----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaaga 227  Q
        |||||||||||||| |||| |||||| |||||| | ||  |||||| || |||||||||||| |||| |||||||||||| |||||||| ||||||    
T  33408394 ttgattagggctatttta-ttaaccatcgtgaaactagaaaatcattcataag-aataggtgcagtataccgattaggggaacttagaggattcgaaaga 33408297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 11 - 319
Target Start/End: Complemental strand, 44809154 - 44808840
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||| ||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  44809154 tctaggaatggatgatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 44809055  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||||||||||| |||||  |||||  ||||| | ||  ||| || |  |||||||||| | |||||||||||    
T  44809054 aagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaaaatcattaat-acgaataggtgcaatataccaattagg 44808957  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatctttt-ataaacaaccttattttatgttatttactttttatgcacacaaacctac 302  Q
     ||||   || |||| |||||||||  ||| |||| ||||  | ||||||   |||| | |||||||| ||||||||||||||||||||  |||| ||||    
T  44808956 agaacatcgatgattcgaaagatctgatctcatctttctccttgtcttttccaaaactatcttattttctgttatttactttttatgcaatcaaaactac 44808857  T
Q  303 tgcctcgggcactaaaa 319  Q
    |||||||||||||||||    
T  44808856 tgcctcgggcactaaaa 44808840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 40794925 - 40795044
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  40794925 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 40795024  T
Q  111 aagagagtcttaagtcaagg 130  Q
    ||||| ||||||||||||||    
T  40795025 aagagggtcttaagtcaagg 40795044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 200
Target Start/End: Complemental strand, 5677586 - 5677416
Alignment:
Q  33 tttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg- 131  Q
    |||||||||  |||||||||| |||||||| |||||||||||||||||||| ||| |||||||||||| || | ||||||||  ||| |||||||||||     
T  5677586 tttgtgatacaaggttaacgtccttaaaaccttcaaagaatattagatcacttaaggaattagggactgtaatctgagaagatggtcctaagtcaaggga 5677487  T
Q  132 ----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaa 200  Q
        ||||| ||||||||||||  |||||| ||||  ||||| |||||||||||||||||| |||||||||||    
T  5677486 ttgattaggactattttagttagccatcgtgaaac--tagaagtattcatgagaaataggtacagtgtaccaa 5677416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 24150598 - 24150833
Alignment:
Q  14 aggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaag 113  Q
    |||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||||||  | |||| |||||||    
T  24150598 aggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggttgtagtttgagaag 24150697  T
Q  114 agagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagggga 208  Q
    || ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| ||||||||||||||    
T  24150698 agggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagggga 24150795  T
Q  209 actcagaggatttgaaagatctagtctaatctctctct 246  Q
    || |||| |||| |||||| ||  ||| ||||||||||    
T  24150796 acacagatgattcgaaagacctgatctcatctctctct 24150833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 48014249 - 48014027
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaa 112  Q
    ||||| ||||||||||||  ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||                |    
T  48014249 taggaatggataatcgtttatttgtgacattaggttaacgttcttaaaaccttcaaataatattagatcacctaaggaattag----------------a 48014166  T
Q  113 gagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagggg 207  Q
     |||||| |||||||| ||     || ||||||||||||||||   ||||||||||| |||||||||||| ||| |||| ||| | ||||||||||||||    
T  48014165 tagagtcctaagtcaaaggatttattggggctattttagttaacattcgtaaaactagagaaatattcataagacatagatgcggagtaccaattagggg 48014066  T
Q  208 aactcagaggatttgaaagatctagtctaatctctctct 246  Q
    ||||||||||||| |||||| | ||||| ||||||||||    
T  48014065 aactcagaggattcgaaagaccaagtctcatctctctct 48014027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 40617007 - 40616769
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||| ||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  40617007 tctaggaatggataatcgtttgttagtgattttaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 40616908  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  40616907 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaagcattcataag-aataggtgcagtataccaattagg 40616810  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||||    
T  40616809 ggaacatagatgattcgaaagacctgatctcatctctctct 40616769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 319
Target Start/End: Complemental strand, 15812336 - 15812021
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| |||||||||||| ||| |||||||||||||||||| |||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  15812336 tctaggaatggataatcgttttttagtgatattaggttaacgtgcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 15812237  T
Q  111 aagagagtcttaagtcaaggg------ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattag 204  Q
    ||||| ||| ||| ||||| |      ||||| ||||||| |||||  || ||| ||||| | ||  ||| || |  |||||||||||| ||||||||||    
T  15812236 aagagggtcctaactcaagagattgatttaggactatttt-gttaactattgtagaactagaaaatcattaat-acgaataggtgcagtataccaattag 15812139  T
Q  205 gggaactcagaggatttgaaagatctagtctaatctctctc--tatctttt-ataaacaaccttattttatgttatttactttttatgcacacaaaccta 301  Q
    ||||||   || |  | |||||| ||  ||| |||||||||  | ||||||   |||| | |||||||| ||||||| ||||||||||||||| ||||||    
T  15812138 gggaacatcgatgtatcgaaagacctgatctcatctctctccttgtcttttccaaaactatcttattttttgttattaactttttatgcacactaaccta 15812039  T
Q  302 ctgcctcgggcactaaaa 319  Q
    ||||||| ||||||||||    
T  15812038 ctgcctcaggcactaaaa 15812021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 27014186 - 27014422
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || ||||||||||| |||||||||||||||||||||||| ||||||| ||||||| |||| |||| || |||| ||||    
T  27014186 tctaggaatggataatcctttattagtgatattaggctaacgttcttaaaactttcaaagattattagaccacctaaggaatcaggggctgtagtttgag 27014285  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||||||| |||| ||     ||||| ||||||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| |||||||||||    
T  27014286 aagagggtcttaactcaaaggattgattaggactatttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtataccaattagg 27014383  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  27014384 ggaacatagatgattcgaaagacctgatctcatctctct 27014422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 319
Target Start/End: Complemental strand, 15405272 - 15404967
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || |||||||||||||||||| ||| |||| ||| |  | ||||||| ||||||| ||||||||| || |||| ||||||||| ||    
T  15405272 tggataatcgtttgttagtgatattaggttaacgtgctttaaaccttcgagaattattagaccacctaaggaattaggggctgtagtttgagaagagggt 15405173  T
Q  119 cttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactca 213  Q
    | ||| |||| ||     ||||||||||||| |||||  |||||  ||||| | ||  ||| || | ||||||||||||| || |||||||||||||| |    
T  15405172 cctaactcaatggattgattagggctatttt-gttaactatcgtggaactagaaaatcattaat-acaaataggtgcagtatatcaattaggggaactta 15405075  T
Q  214 gaggatttgaaagatctagtctaatctctctc--tatcttttataaa-caaccttattttatgttatttactttttatgcacacaaacctactgcctcgg 310  Q
    || |||| |||||| ||  ||| |||||||||  | ||||||  ||| | | |||||||| ||||||||||||||||||||||| ||||||||||||||     
T  15405074 gatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatcttatttt-tgttatttactttttatgcacaccaacctactgcctcgt 15404976  T
Q  311 gcactaaaa 319  Q
    |||||||||    
T  15404975 gcactaaaa 15404967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 319
Target Start/End: Original strand, 56195450 - 56195763
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  56195450 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 56195549  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||||||||||| |||||  |||||  ||||| | ||  ||| || |  |||||||||||| |||||||||||    
T  56195550 aagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaaaatcattaat-acgaataggtgcagtataccaattagg 56195647  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatctttt-ataaacaaccttattttatgttatttactttttatgcacacaaacctac 302  Q
    |||||   || |||| |||||| ||  ||| |||||||||  | ||||||   |||| | |||||||| |||||||||   ||||||||  |||| ||||    
T  56195648 ggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatcttattttctgttattta-aatttatgcaatcaaaactac 56195746  T
Q  303 tgcctcgggcactaaaa 319  Q
    |||||||||||||||||    
T  56195747 tgcctcgggcactaaaa 56195763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 5670500 - 5670620
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  5670500 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 5670599  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  5670600 aagagggtcctaactcaaggg 5670620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 5672818 - 5672938
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  5672818 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 5672917  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  5672918 aagagggtcctaactcaaggg 5672938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 39501571 - 39501809
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| |||     
T  39501571 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgat 39501670  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||| ||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  39501671 aagagggtcctaactcaaaggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 39501768  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||||    
T  39501769 ggaacatagatgattcgaaagacctgatctcatctctctct 39501809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 40903282 - 40903080
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| | ||||||| ||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||| || || |||| ||||    
T  40903282 tctaggaattgataatcctttattagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaagggctgtagtttgag 40903183  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||||||| |||||||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  40903182 aagagagtcctaagtcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 40903085  T
Q  206 ggaac 210  Q
    |||||    
T  40903084 ggaac 40903080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 5 - 319
Target Start/End: Original strand, 33926889 - 33927209
Alignment:
Q  5 gattattctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatag 104  Q
    ||||| ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| ||  |  | ||||||| ||||| | ||||||||| || |||    
T  33926889 gattagtctaggaatggataatcgtttgttagtgatattaggttaacgtgctttaaacctttgagaattattagaccacctgaggaattaggggctgtag 33926988  T
Q  105 tatgagaagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtacca 199  Q
    | | ||||||| ||| ||| |||||||     ||| ||||||||| |||||  |||||  ||||| | ||  ||| ||  ||| |||||||||| |||||    
T  33926989 ttttagaagagggtcctaactcaagggattgattatggctatttt-gttaactatcgtggaactagaaaatcattaatacgaa-taggtgcagtatacca 33927086  T
Q  200 attaggggaactcagaggatttgaaagatctagtctaatctctctc--tatcttttataaa-caaccttattttatgttatttactttttatgcacacaa 296  Q
    |||||||||||   || |||| |||||| ||  ||| |||||||||  | ||||||  ||| | | |||||||||||||||||||||||||||||||| |    
T  33927087 attaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatcttattttatgttatttactttttatgcacacca 33927186  T
Q  297 acctactgcctcgggcactaaaa 319  Q
    |||||||||||||||||||||||    
T  33927187 acctactgcctcgggcactaaaa 33927209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 52006729 - 52006494
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||| |||| |||||| ||| |||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  52006729 tctaggaatggataatcgtttgttagtgatattaggttgacgtgcttaaacctt-caaagattattagaccacctaaggaattaggggctgtagtttgag 52006631  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| |||||||||||||||     ||| | ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  52006630 aagagggtcttaagtcaagggattgattatgactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 52006533  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| || |||| ||||||||    
T  52006532 ggaacatagatgattcgaaagacctggtctcatctctct 52006494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 18911422 - 18911656
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||| ||||||||||| ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  18911422 tctaggaatggataatcgtttgttagtgataataggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 18911520  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| ||||  |||||| || |||||||||||| |||||||||||    
T  18911521 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagagaatcattcataag-aataggtgcagtataccaattagg 18911618  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctc 243  Q
    |||||  ||| ||||  ||||| ||||||| |||||||    
T  18911619 ggaacatagatgattcaaaagacctagtctcatctctc 18911656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 34017980 - 34017876
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  34017980 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 34017881  T
Q  111 aagag 115  Q
    |||||    
T  34017880 aagag 34017876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 253
Target Start/End: Complemental strand, 3798006 - 3797762
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  3798006 tctaggaatgaataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggttgtagtgtgag 3797908  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||||||| |||||||     ||||| ||||||| |||||  |||||  |||||  |||  ||| || || |||||||||||| |||||||||||    
T  3797907 aagagggtcttaactcaagggattgattaggactatttt-gttaactatcgtggaactagtgaatcattaataag-aataggtgcagtataccaattagg 3797810  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatctttt 253  Q
    |||||  ||| |||| |||||| ||  ||| |||||||||||||||||    
T  3797809 ggaacatagatgattcgaaagacctgatctcatctctctctatctttt 3797762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 48013311 - 48013232
Alignment:
Q  284 tttatgcaca-caaacctactgcctcgggcactaaaataaactttactcatcttatttcataacgcaattgtttacttga 362  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  48013311 tttatgcacaacaaacctactgcctcgggcactaaaataaactttacgcatcatatttcataacacaattgtttacttga 48013232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 319
Target Start/End: Original strand, 56198776 - 56199090
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  || |||||||||||||||| | |||||||| |||||||| ||||||| ||||||| |||| ||||  | ||||  |||    
T  56198776 tctaggaatgaataatcgtttgttagtgatattaggttaacatgcttaaaaccttcaaagattattagaccacctaaggaatcaggggttgtagttagag 56198875  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  ||| || ||||| | ||  ||| || | ||||||||||||| |||||||||||    
T  56198876 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcttagaactagaaaatgattaat-acaaataggtgcagtataccaattagg 56198973  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatctttt-ataaacaaccttattttatgttatttactttttatgcacacaaacctac 302  Q
    |||||   || |||| |||||| ||  | | |||||||||  | ||||||   |||| | |||||||| | ||||||||||||||||||||| |||||||    
T  56198974 ggaacatcgatgattcgaaagacctgatttcatctctctccttgtcttttccaaaactatcttattttctattatttactttttatgcacaccaacctac 56199073  T
Q  303 tgcctcgggcactaaaa 319  Q
    || ||||||||||||||    
T  56199074 tgtctcgggcactaaaa 56199090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 46955677 - 46955557
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||| ||||||| |||||||| ||||||  ||||||| ||||||||| || |||| ||||    
T  46955677 tctaggaatggataatcgtttgttagtgatattaggttaacgtttttaaaacattcaaagattattagtccacctaaggaattaggggctgtagtttgag 46955578  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  46955577 aagagggtcctaactcaaggg 46955557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 52531134 - 52530896
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||  ||||||||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  52531134 tctaggaatggataatcgtttgttagtgatattaggttaacactcttaaaaccttcaaagattattagaccacctaaggaattaggggatgtagtttgag 52531035  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  || || | ||  |||||| || |||||||||||| |||||||||||    
T  52531034 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaattagaaaatcattcataag-aataggtgcagtataccaattagg 52530937  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||||    
T  52530936 ggaacatagatgattcgaaagacctgatctcatctctctct 52530896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 33493894 - 33493791
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| | ||||||||||  ||||||||| || |||||||||||| |||| |||||||||||||||||||||||| |||||||||||| || | ||||    
T  33493894 tctaggaatagataatcgtttatttgtgataatatgttaacgttctttaaacattcaaagaatattagatcacctaaggaattagggactgtaatctgag 33493795  T
Q  111 aaga 114  Q
    ||||    
T  33493794 aaga 33493791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 19820651 - 19820886
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||  | |||||| ||| |||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  19820651 tctaggaatggataatcgtttgttagtgatattaggttaagatgcttaaacctt-caaagattattagaccacctaaggaattaggggctgtagtttgag 19820749  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  19820750 aagagggtcctaagtcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 19820847  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  19820848 ggaacaaagatgattcgaaagacctgatctcatctctct 19820886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 12238188 - 12238423
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||  ||||||| ||||||||||||||| |||||||| ||||||| |||| || | ||||    
T  12238188 tctaggaatggataatcgtttgttagtgatattaggttaacgtgtttaaaaccttcaaagaatattagctcacctaaggaattagagactgtaatctgag 12238287  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||  ||| |||||||     ||| | ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  12238288 aagagggttctaactcaagggattgattatgactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 12238385  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctc 243  Q
    |||||   || || | |||||| ||||||| |||||||    
T  12238386 ggaacattgatgactcgaaagacctagtctcatctctc 12238423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 38283687 - 38283568
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| || ||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  38283687 tctaggaatggataatcctttgttagtgatattaggttaacgtgct-aaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 38283589  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||||||| ||| |||||||    
T  38283588 aagagagtcctaactcaaggg 38283568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 44164706 - 44164825
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||| | |||||| ||| |||||| ||||||| ||||||| |||||||||| | |||| ||||    
T  44164706 tctaggaatggataatcgtttgttagtgatattaggttaacctgcttaaacctt-caaagattattagaccacctaaggaattagggattgtagtttgag 44164804  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| |||||||||||    
T  44164805 aagagggtcctaagtcaaggg 44164825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 48415728 - 48415620
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  ||  |||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||  || |||| ||||    
T  48415728 tctaggaatggataatcatttattattgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggagctgtagtttgag 48415629  T
Q  111 aagagagtc 119  Q
    |||||||||    
T  48415628 aagagagtc 48415620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 19859720 - 19859601
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||| | ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  19859720 tctaggaatggataatcgtttgttagtgatattaggttaacatgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 19859622  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  19859621 aagagggtcctaactcaaggg 19859601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 24044339 - 24044220
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||  ||||| |||| ||||| ||||||| |||||||  |||||||| || |||| ||||    
T  24044339 tctaggaatggataatcgtttgttagtgatattaggttaacgtgtttaaaccttt-aaagattattagaccacctaagaaattaggggctgtagtttgag 24044241  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| |||||||||||    
T  24044240 aagagtgtcctaagtcaaggg 24044220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 27677253 - 27677134
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || | |||||||||||||||| |||||| ||| |||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  27677253 tctaggaatggataatcgtttgttagcgatattaggttaacgtgcttaaacctt-caaagattattagaccacctaaggaattaggggctgtagtttgag 27677155  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||  |||||||||||    
T  27677154 aagagggttctaagtcaaggg 27677134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 37103414 - 37103181
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| ||| |||| ||||||| |||| || ||||||||| || |||| ||||    
T  37103414 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcgaagattattagaccaccaaaggaattaggggctgtagtttgag 37103316  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||  |||||||| ||     ||||| ||||||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| |||||||||||    
T  37103315 aagagggttctaagtcaaaggattgattaggactatttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtataccaattagg 37103218  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctct 242  Q
    | |||  ||| |||| ||||||  |||||| ||||||    
T  37103217 gaaacatagatgattcgaaagacttagtctcatctct 37103181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 8874960 - 8874774
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| |||||| |||||  ||||| |||||| ||||| ||||||||||| |||||||||||||||| ||||||| ||||||||| || || |  |||    
T  8874960 tctaggaatggatagtcgtttatttgttatattaagttaatgttcttaaaaccttcaaagaatattagaccacctaaggaattaggggctgtaatcggag 8874861  T
Q  111 aagagagtcttaagtcaa-----gggttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagt 193  Q
    ||||| ||  ||||||||      | ||| ||||||||| ||||| |||| | |||||| ||||  |||||| |||||||||||||||    
T  8874860 aagagggttctaagtcaatcgattgattatggctatttt-gttaaccatcttgaaactagagaatcattcataagaaataggtgcagt 8874774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 5681353 - 5681470
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaa 112  Q
    ||||| ||||||||||||  || |||||| ||||||||||| ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||||    
T  5681353 taggaatggataatcgtttgttagtgatactaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgagaa 5681451  T
Q  113 gagagtcttaagtcaaggg 131  Q
    ||| ||| ||| |||||||    
T  5681452 gagggtcctaactcaaggg 5681470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 15432002 - 15432237
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||| ||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  15432002 tctaggaatggataatcgtttgttagtgatattagattaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggatgtagtttgag 15432100  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||  ||||||| |||||  |||||   |||| ||||  |||||| || |||||||||||| |||||||||||    
T  15432101 aagagggtcctaactcaagggattgattagaactatttt-gttaactatcgtggtactagagaatcattcataag-aataggtgcagtataccaattagg 15432198  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||   || || | |||||| ||||||| ||||||||    
T  15432199 ggaacatcgatgactcgaaagacctagtctcatctctct 15432237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 48637428 - 48637548
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaaga-atattagatcacctaatgaattagggactatagtatga 109  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| ||||||||  ||||||| ||||||| ||||||||| || |||| |||    
T  48637428 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagatttattagaccacctaaggaattaggggctgtagtttga 48637526  T
Q  110 gaagagagtcttaagtcaaggg 131  Q
    |||||| ||| ||| |||||||    
T  48637527 gaagagggtcctaactcaaggg 48637548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 3719047 - 3719166
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||  ||||| | |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  3719047 tctaggaatggataatcgtttgttagtgatattaggttaacgtgtttaaatc-ttcaaagattattagaccacctaaggaattaggggttgtagtttgag 3719145  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| |||| ||||||    
T  3719146 aagagggtcctaagccaaggg 3719166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 15430054 - 15429935
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| |||||||||||| ||| |||||||||||||||||| ||| |||| ||||||||  |||||| ||||||| ||||||||| |  |||| ||||    
T  15430054 tctaggaatggataatcgttttttagtgatattaggttaacgtgctt-aaaccttcaaagataattagaccacctaaggaattaggggcagtagtttgag 15429956  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||| | |||  ||||||||||    
T  15429955 aagtgggtcccaagtcaaggg 15429935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 15446926 - 15446815
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || |||||||||||||||||| |||||| ||| | |||| |||| || ||||||| ||||||||| || |||| ||||||||| ||    
T  15446926 tggataatcgtttgttagtgatattaggttaacgtgcttaaacctt-ctaagattattggaccacctaaggaattaggggctgtagtttgagaagagggt 15446828  T
Q  119 cttaagtcaaggg 131  Q
    | |||||||||||    
T  15446827 cctaagtcaaggg 15446815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 27679423 - 27679338
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||    
T  27679423 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggg 27679338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 10386121 - 10386165
Alignment:
Q  264 ttattttatgttatttactttttatgcacacaaacctactgcctc 308  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  10386121 ttattttctgttatttactttttatgcacacaaacctactgcctc 10386165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 12782836 - 12782947
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || | |||||||||||||||| |||||| ||| |||||| ||||||| ||||||| |||||||||  | |||| |||||| || ||    
T  12782836 tggataatcgtttgttagggatattaggttaacgtgcttaaacctt-caaagattattagaccacctaaggaattaggggttgtagtttgagaaaagggt 12782934  T
Q  119 cttaagtcaaggg 131  Q
    | |||||||||||    
T  12782935 cctaagtcaaggg 12782947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 15164124 - 15164236
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || |||||||||||||||  | |||||||| |||||||| ||||||| ||||||| |||||||||  | |||| | ||||||| ||    
T  15164124 tggataatcgtttgttagtgatattaggttaatctgcttaaaaccttcaaagattattagaccacctaaggaattaggggttgtagtttaagaagagggt 15164223  T
Q  119 cttaagtcaaggg 131  Q
    | ||| |||||||    
T  15164224 cctaactcaaggg 15164236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 19864711 - 19864592
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||| | ||| |||| |||||||| ||||||| || ||||  |||||||| || |||| ||||    
T  19864711 tctaggaatggataatcgtttgttagtgatattaggttaacatgctt-aaaccttcaaagattattagaccatctaagaaattaggggctgtagtttgag 19864613  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  19864612 aagagggtcctaactcaaggg 19864592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 19929070 - 19929121
Alignment:
Q  264 ttattttatgttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  19929070 ttattttctgttatttaatttttatgcacacaaacctactgcctcaggcact 19929121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 18673280 - 18673195
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  18673280 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 18673195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 49270617 - 49270722
Alignment:
Q  22 ataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtctt 121  Q
    |||||||||  || |||||||||||||||| |||||||||| ||||   | ||||||| ||||||  |||||||||||| |||| ||||||||| ||| |    
T  49270617 ataatcgtttgttagtgatattaggttaacattcttaaaaccttca---attattagaccacctagggaattagggactgtagtttgagaagagggtcct 49270713  T
Q  122 aagtcaagg 130  Q
    || ||||||    
T  49270714 aactcaagg 49270722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 17670499 - 17670540
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  17670499 ttatttactttttatgcacacaaacctactgcctcaggcact 17670540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 18859965 - 18860006
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  18859965 ttatttactttttatgcacacaaacctactgcctcaggcact 18860006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 29324748 - 29324849
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| ||| |  | ||||||| ||||||| ||||||||| || |||| ||||    
T  29324748 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctttaaaccttcgagaattattagaccacctaaggaattaggggctgtagtttgag 29324847  T
Q  111 aa 112  Q
    ||    
T  29324848 aa 29324849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 15436668 - 15436549
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || ||||||||| |||  ||||||||||||||||| ||| |||| ||||||||  |||||| ||||||| ||||||||| |  |||| ||||    
T  15436668 tctaggaatgtataatcgttttttattgatattaggttaacgtgctt-aaaccttcaaagataattagaccacctaaggaattaggggcagtagtttgag 15436570  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||| | |||  ||||||||||    
T  15436569 aagtgggtcccaagtcaaggg 15436549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 19827413 - 19827488
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaa 87  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| |||||||    
T  19827413 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaa 19827488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 10248002 - 10248047
Alignment:
Q  264 ttattttatgttatttacttttta-tgcacacaaacctactgcctc 308  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  10248002 ttattttatgttatttactttttattgcacacaaacgtactgcctc 10248047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 39498406 - 39498470
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||| ||| |||| |||||| ||  ||| ||||||||||    
T  39498406 aataggtgcagtataccaattaggggaacttagatgattcgaaagacctgatctcatctctctct 39498470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 35509888 - 35509973
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| |||||| |||| || |  ||||||| ||||||| |||||||||    
T  35509888 tctaggaatggataatcctttattagtgatattaggttaacgtgcttaaaccttt-aatggttattagaccacctaaggaattaggg 35509973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 21419712 - 21419796
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagg 96  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| ||||| |  ||||||| ||||||| ||||||||    
T  21419712 tctaggaatggataatcttttattagtgatattaggttaacgtgctt-aaaccttcaacggttattagaccacctaaggaattagg 21419796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 30392517 - 30392577
Alignment:
Q  36 gtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    |||||||||||||||||| ||| |||| |||||||| ||||||| ||||| | |||||||||    
T  30392517 gtgatattaggttaacgtgctt-aaaccttcaaagattattagaccaccttaggaattaggg 30392577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 307
Target Start/End: Complemental strand, 33493712 - 33493577
Alignment:
Q  171 tattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaacaaccttatttt 270  Q
    ||||||| || ||||||||||||||||||| |||   || |||||||||| ||| || ||  ||| |||||||  ||| ||||  ||||||| ||  | |    
T  33493712 tattcataaggaataggtgcagtgtaccaaatagaataaatcagaggattcgaatgacctgatctcatctctccttatattttcaaaacaacttttatct 33493613  T
Q  271 atgttatttactttttatgcacacaaacctactgcct 307  Q
    || ||||||||||||||||||  |||||| |||||||    
T  33493612 at-ttatttactttttatgcaatcaaaccaactgcct 33493577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 34017806 - 34017742
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| ||  ||| ||||||||||    
T  34017806 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 34017742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 8e-74; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 33 - 322
Target Start/End: Original strand, 34682628 - 34682920
Alignment:
Q  33 tttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg- 131  Q
    |||||||||| |||||||||||||||||||   |||||||||||||||||||| | |||||||||||| || | ||||||||||||| |||||||||||     
T  34682628 tttgtgatatcaggttaacgttcttaaaacc--caaagaatattagatcaccttaggaattagggactgtaatctgagaagagagtcctaagtcaaggga 34682725  T
Q  132 ----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaaga 227  Q
        ||||||||||||| ||||| |||||| |||||| ||||||| ||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||    
T  34682726 ttgattagggctattttggttaaccatcgtgaaactagagaaatactcataggaaatacgtgcagtgtaccaattagggaaactcagaggattcgaaaga 34682825  T
Q  228 tctagtctaatctctctctatcttttataaacaaccttattttatgttatttactttttatgcac-acaaacctactgcctcgggcactaaaataa 322  Q
      |||||| || |||||||||||||| |||||||| ||| |||||||||||||| |||||||||| |||||||||||||||| | |||||||||||    
T  34682826 catagtctcatttctctctatcttttctaaacaactttaatttatgttatttac-ttttatgcacaacaaacctactgcctcagacactaaaataa 34682920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 11 - 319
Target Start/End: Complemental strand, 31427741 - 31427427
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| ||||||||| || |||| ||||    
T  31427741 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacttaaggaattaggggctgtagtttgag 31427642  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||||||||||| |||||  |||||  || || | ||  ||| || |  |||||||||||| |||||||||||    
T  31427641 aagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaattagaaaatcattaat-acgaataggtgcagtataccaattagg 31427544  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatctttt-ataaacaaccttattttatgttatttactttttatgcacacaaacctac 302  Q
    |||||   || |||| |||||| ||  ||| |||||||||  | ||||||   |||| | |||||||| ||||||||||||||||||||  |||| | ||    
T  31427543 ggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatcttattttctgttatttactttttatgcaatcaaaaccac 31427444  T
Q  303 tgcctcgggcactaaaa 319  Q
    |||||||||||||||||    
T  31427443 tgcctcgggcactaaaa 31427427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 319
Target Start/End: Original strand, 45457075 - 45457381
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||| || ||| |||||||||||||||||||||| |||| ||| |  | ||||||| ||||||| ||||||||| || |||| ||||||||| ||    
T  45457075 tggataatctttttttagtgatattaggttaacgttctttaaaccttctattattattagaccacctaaggaattaggggctgtagtttgagaagagggt 45457174  T
Q  119 cttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactca 213  Q
    ||||| |||||||     ||||||||||||| |||||  |||||  ||||| | ||  ||| || |  |||||||||||| || |||||||||||||| |    
T  45457175 cttaactcaagggattgattagggctatttt-gttaactatcgtggaactagaaaatcattaat-acgaataggtgcagtataacaattaggggaactta 45457272  T
Q  214 gaggatttgaaagatctagtctaatctctctc--tatctttt-ataaacaaccttattttatgttatttactttttatgcacacaaacctactgcctcgg 310  Q
    || |||| |||||| ||  ||| |||||||||  | ||||||   |||| | |||||||| ||||||||||||||||||||||| ||||||||| ||| |    
T  45457273 gatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatcttattttctgttatttactttttatgcacaccaacctactgtctcag 45457372  T
Q  311 gcactaaaa 319  Q
    |||||||||    
T  45457373 gcactaaaa 45457381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 24235001 - 24235203
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  24235001 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 24235100  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaat-attcatgagaaataggtgcagtgtaccaattag 204  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  |||||  ||||| |||||| || |||||||||||| ||||||||||    
T  24235101 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaacta-ggaaatcattcataag-aataggtgcagtataccaattag 24235197  T
Q  205 gggaac 210  Q
    ||||||    
T  24235198 gggaac 24235203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 285
Target Start/End: Original strand, 5105634 - 5105911
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaa 112  Q
    ||||| ||||||||| ||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||||    
T  5105634 taggaatggataatcctttattagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgagaa 5105733  T
Q  113 gagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagggg 207  Q
    ||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| |  |||||||||||| |||||||||||||    
T  5105734 gagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcat-atgaataggtgcagtataccaattagggg 5105831  T
Q  208 aactcagaggatttgaaagatctagtctaatctctctctatcttttataaacaa--ccttattttatgttatttactttt 285  Q
    |||  |||  |||||||||| ||  ||| ||||||||  || |||| ||| |||  | ||||||||||||||||| ||||    
T  5105832 aacatagataatttgaaagacctgatctcatctctcttcatattttctaaccaaatctttattttatgttatttaatttt 5105911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 308
Target Start/End: Complemental strand, 36808641 - 36808339
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  || || ||||||||||||||| |||||| |||||||||| ||||||| ||||||| ||||||||| || |||| | ||    
T  36808641 tctaggaatgtataatcgtttattagtaatattaggttaacgtgcttaaa-ctttcaaagattattagaccacctaaagaattagggtctgtagtttaag 36808543  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||||||| |||||||     ||||  ||||||| |||||  || ||  ||||| | ||  |||||| || ||||||||||||||||||||||||    
T  36808542 aagagggtcttaactcaagggattgattagaactatttt-gttaactattgtggaactagaaaatcattcataag-aataggtgcagtgtaccaattagg 36808445  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatctttt-ataaacaaccttattttatg-ttatttactttttatgcacacaaaccta 301  Q
    |||||| | ||||||||||||| ||  ||| |||||||||  ||||||||   |||| |  ||||||| || |||||||  |||||||||||||||||||    
T  36808444 ggaacttaaaggatttgaaagacctgatctcatctctctccttatcttttccaaaactattttattttctgtttattta-attttatgcacacaaaccta 36808346  T
Q  302 ctgcctc 308  Q
    |||||||    
T  36808345 ctgcctc 36808339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 25959888 - 25959652
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| || ||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  25959888 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaacctttaaagattattagaccacctaaggaattaggggttgtagtctgag 25959789  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  25959788 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 25959691  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  25959690 ggaacatagatgattcgaaagacctgatctcatctctct 25959652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 31586140 - 31585904
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  31586140 tctaggaatggataatcctttattagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 31586041  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || ||||| |||||| |||||||||||    
T  31586040 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aatagatgcagtataccaattagg 31585943  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  31585942 ggaacatagatgattcgaaagacctgatctcatctctct 31585904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 30274968 - 30274749
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  |  ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  30274968 tctaggaatggataatcctttatcagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 30274869  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||||||| |||||||     ||| | ||||||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| |||||||||||    
T  30274868 aagagggtcttaactcaagggattgattatgactatttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtataccaattagg 30274771  T
Q  206 ggaactcagaggatttgaaaga 227  Q
     ||||  ||| |||| ||||||    
T  30274770 agaacatagatgattcgaaaga 30274749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 9185624 - 9185386
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||| ||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||| |||| |||| ||||    
T  9185624 tctaggaatgaataatcctttattagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattagagactgtagtttgag 9185525  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||| ||||||| |||||||||||    
T  9185524 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aatatgtgcagtataccaattagg 9185427  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||||    
T  9185426 ggaacatagatgattcgaaagacctgatctcatctctctct 9185386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 11348095 - 11347975
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| |||||||  |||||||| || |||| ||||    
T  11348095 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaagaaattaggggctgtagtttgag 11347996  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  11347995 aagagggtcctaactcaaggg 11347975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 24238273 - 24238393
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||  |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  24238273 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaatcttcaaagattattagaccacctaaggaattaggggctgtagtttgag 24238372  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  24238373 aagagggtcctaactcaaggg 24238393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 8888542 - 8888779
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  || |||||||||||||||| | ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  8888542 tctaggaatgaataatcgtttgttagtgatattaggttaacatgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 8888640  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||  ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  8888641 aagagggtcctaactcaagggattgattagaactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 8888738  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| ||||||||||| ||| ||| ||||||||||    
T  8888739 ggaacatagatgatttgaaagacctaatctcatctctctct 8888779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 9188852 - 9188614
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || ||||||||||||||||||||||||||| |||||||| ||||||| |||||||  ||||||||  | |||| ||||    
T  9188852 tctaggaatggataatcctttattagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaagtaattaggggttgtagtttgag 9188753  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| ||| |  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  9188752 aagagggtcctaactcaagggattgattaggactatttt-gttgactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 9188655  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||||    
T  9188654 ggaacatagatgattcgaaagacctgatctcatctctctct 9188614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 22020973 - 22021211
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||||||| || ||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  22020973 tctaggaatggataatcgtttattagtgatattaggttaacgtacttaaaacctttaaagattattagaccacctaaggaattaggggttgtagtttgag 22021072  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||  ||| |||||||     ||||| ||||||| |||||  |||||  ||||| ||||  |||||| || |||||||||||| |||||||||||    
T  22021073 aagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaactagagaatcattcataag-aataggtgcagtataccaattagg 22021170  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    | |||  ||| |||| |||||| ||  ||| ||||||||||    
T  22021171 gtaacatagatgattcgaaagaccttatctcatctctctct 22021211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 25139131 - 25139011
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  25139131 tctaggaatggataatcctttattagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggttgtagtttgag 25139032  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  25139031 aagagggtcctaactcaaggg 25139011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 37279876 - 37279638
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||| |||||||||| |||||||| ||||||| ||| ||| ||||||||| || |||| ||||    
T  37279876 tctaggaatggataatcgtttgttagtgatattaggttaacattcttaaaaccttcaaagattattagaccacgtaaggaattaggggctgtagtttgag 37279777  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    |||||  || ||| |||||||     ||| | ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  37279776 aagaggatcctaactcaagggattgattatgactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 37279679  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||||    
T  37279678 ggaacatagatgattcgaaagacctgatctcatctctctct 37279638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 6826678 - 6826799
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||||| ||| |||| | ||||||| ||||||| ||||||||| || |||| ||||    
T  6826678 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcttaaacctt-caaaaattattagaccacctaaggaattaggggctgtagtttgag 6826776  T
Q  111 aagagagtcttaagtcaagggtt 133  Q
    |||||| || |||||||||||||    
T  6826777 aagagaatcctaagtcaagggtt 6826799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 35521553 - 35521367
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    |||||||| |||  |||||||||| |||||| || ||||||||| ||||||||||||||||||||||||  ||||||||| | || | ||||||||| ||    
T  35521553 tggataattgtttatttgtgatataaggttagcgctcttaaaaccttcaaagaatattagatcacctaagaaattagggattgtaatctgagaagagggt 35521454  T
Q  119 cttaagtcaa-----gggttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaa 200  Q
    | ||||||||      | ||||  ||||||||||||| ||||| ||||||| ||||||||| |   |||||||||| ||| ||||||    
T  35521453 cctaagtcaatgagttgattagaactattttagttaaccatcgaaaaactagagaaatatttacaggaaataggtgtagtataccaa 35521367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 42368910 - 42368675
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  42368910 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggttgtagtttgag 42368812  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  42368811 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 42368714  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  | | ||||||||||| ||  ||| ||||||||    
T  42368713 ggaacataaatgatttgaaagacctgatcttatctctct 42368675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 43208089 - 43207985
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  || ||||||||||||||||||||||| ||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  43208089 tctaggaatgaataatcgtttgttagtgatattaggttaacgttcttacaaccttcaaagactattagaccacctaaggaattaggggctgtagtttgag 43207990  T
Q  111 aagag 115  Q
    |||||    
T  43207989 aagag 43207985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 45493355 - 45493158
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||| ||||||||||||||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  45493355 tctaggaatggataatcctttattagtgatactaggttaacgttctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 45493257  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||  ||| |||||||     ||||| ||||||| |||||  |||||| ||||| ||||  |||||| || |||||||||||| |||||||||||    
T  45493256 aagagggttctaactcaagggattgattaggactatttt-gttaactatcgtagaactagagaatcattcataag-aataggtgcagtataccaattagg 45493159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 45501097 - 45500900
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||| ||||||||||||||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  45501097 tctaggaatggataatcctttattagtgatactaggttaacgttctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 45500999  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||  ||| |||||||     ||||| ||||||| |||||  |||||| ||||| ||||  |||||| || |||||||||||| |||||||||||    
T  45500998 aagagggttctaactcaagggattgattaggactatttt-gttaactatcgtagaactagagaatcattcataag-aataggtgcagtataccaattagg 45500901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 26365841 - 26366074
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaa 112  Q
    ||||| || |||||||||  || |||||||||||||||||| | |||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||||    
T  26365841 taggaatgaataatcgtttgttagtgatattaggttaacgtgcataaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgagaa 26365940  T
Q  113 gagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagggg 207  Q
    ||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| ||||  |||||| || ||||||| || | |||||||||||||    
T  26365941 gagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagagaatcattcataag-aataggtacactataccaattagggg 26366038  T
Q  208 aactcagaggatttgaaagatctagtctaatctctc 243  Q
    |||  |||  |||  ||||| ||||||| |||||||    
T  26366039 aacatagataattcaaaagacctagtctcatctctc 26366074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 27266702 - 27266813
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || |||||| ||||||||||| ||||||||||||||||| ||||||| ||||||| |||||||||  | |||| ||||||||| ||    
T  27266702 tggataatcgtttattagtgataataggttaacgtacttaaaactttcaaagattattagaccacctaaggaattaggggttgtagtttgagaagagggt 27266801  T
Q  119 cttaagtcaagg 130  Q
    | ||| ||||||    
T  27266802 cctaactcaagg 27266813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 25821045 - 25820767
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||| ||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  25821045 tctaggaatggataatcgtttgttagtgatactaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggttgtagtttgag 25820947  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| || ||||||||    
T  25820946 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtatatcaattagg 25820849  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaac--aaccttattttatgttatttactttt 285  Q
    |||||   || |||| |||||| ||||||| |||||||  ||| ||||  ||||  | | ||||||| ||||||||||||||    
T  25820848 ggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacatatctttattttctgttatttactttt 25820767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 43723606 - 43723719
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||| ||| |||||| ||| |||||| ||||||| ||||||| ||||||||||||||||| ||||    
T  43723606 tctaggaatggataatcgtttgttagtgatattaggttagcgtgcttaaacctt-caaagattattagaccacctaaggaattagggactatagtttgag 43723704  T
Q  111 aagagagtcttaagt 125  Q
    | ||| ||| |||||    
T  43723705 acgagggtcctaagt 43723719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 319
Target Start/End: Original strand, 45453779 - 45454093
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| ||| |  | ||||||| ||||||| |||||||||  | |||| ||||    
T  45453779 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctttaaaccttcgagaattattagaccacctaaggaattaggggttgtagtttgag 45453878  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     |||| |||||||| |||||  ||| |  ||||| | ||  ||| ||  ||| |||||||| | ||||||||||     
T  45453879 aagagggtcctaactcaagggattgattagtgctatttt-gttaactatcatggaactagaaaatcattaatacgaa-taggtgcattataccaattaga 45453976  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatcttttataaa-caaccttattttatgttatttactttttatgcacacaaacctac 302  Q
    | |||| | | |||| |||||| ||  ||| |||||||||  | ||||||  ||| | | |||||||| ||||||||||||||||||||||| |||||||    
T  45453977 gaaacttatatgattcgaaagacctgatctcatctctctccttgtctttttcaaaactatcttattttctgttatttactttttatgcacaccaacctac 45454076  T
Q  303 tgcctcgggcactaaaa 319  Q
    |||||| ||||||||||    
T  45454077 tgcctcaggcactaaaa 45454093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 40781378 - 40781613
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || || ||||||||| ||||| ||| |||| |||||||| ||||||| |||||||  |||||||| || |||| ||||    
T  40781378 tctaggaatggataatcgtttgttagtaatattaggtcaacgtgctt-aaaccttcaaagattattagaccacctaagaaattaggggctgtagtttgag 40781476  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  40781477 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 40781574  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  40781575 ggaacatagatgattcgaaagacctgatctcatctctct 40781613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 13972093 - 13971875
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||  | || | ||||    
T  13972093 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggttttattttgag 13971995  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||||| |||||     ||| | ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  13971994 aagagtgtcctaagttaagggattgattatgactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 13971897  T
Q  206 ggaactcagaggatttgaaaga 227  Q
    |||||  ||| |||| ||||||    
T  13971896 ggaacatagatgattcgaaaga 13971875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 30926449 - 30926519
Alignment:
Q  18 ttggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaat 88  Q
    |||||||||||||  |||||||||||| |||||||||| |||||| |||||||| ||||||| ||||||||    
T  30926449 ttggataatcgtttatttgtgatattaagttaacgttcataaaaccttcaaagagtattagaccacctaat 30926519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 319
Target Start/End: Original strand, 33310572 - 33310885
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||| | ||| |||| ||| |  | ||||||| ||||||| ||||||||| || |||| ||||    
T  33310572 tctaggaatggataatcgtttgttagtgatattaggttaacttgctttaaaccttcgagaattattagaccacctaaggaattaggggctgtagtttgag 33310671  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||||||||||| |||||  | |||  ||||| | || |||| || |  ||||| |||||| |||||||||||    
T  33310672 aagagggtcctaactcaagggattgattagggctatttt-gttaactaccgtggaactagaaaattattaat-atgaatagttgcagtataccaattagg 33310769  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatctttt-ataaacaaccttattttatgttatttactttttatgcacacaaacctac 302  Q
    |||||   || |||| |||||| ||  ||| |||||||||  | ||||||   |||| | |||||||| |||||||||   ||||||||  |||| ||||    
T  33310770 ggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatcttattttctgttattta-aatttatgcaatcaaaactac 33310868  T
Q  303 tgcctcgggcactaaaa 319  Q
    |||||||||||||||||    
T  33310869 tgcctcgggcactaaaa 33310885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 25870690 - 25870809
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| |||||||| |||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  25870690 tctaggaatggataattgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggatgtagtttgag 25870788  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||  ||| ||| |||||||    
T  25870789 aagacggtcctaactcaaggg 25870809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 29440401 - 29440504
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||| ||| ||||||||||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  29440401 tctaggaatggataatcctttattagtgatactagcttaacgttctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 29440499  T
Q  111 aagag 115  Q
    |||||    
T  29440500 aagag 29440504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 5666424 - 5666509
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||    
T  5666424 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggg 5666509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 25874081 - 25874166
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| |||||||| |||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||    
T  25874081 tctaggaatggataattgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggg 25874166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 4578017 - 4578069
Alignment:
Q  264 ttattttatgttatttactttttat-gcacacaaacctactgcctcgggcact 315  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||    
T  4578017 ttattttctgttatttactttttattgcacacaaacctactgcctcaggcact 4578069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 38015424 - 38015544
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || ||||||||||||||| || ||| |||| ||| |  | ||||||| ||||||| ||||||||| || |||| ||||    
T  38015424 tctaggaatggataatcatttgttagtgatattaggttaaggtgctttaaaccttcgagaattattagaccacctaaggaattaggggctgtagtttgag 38015523  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  38015524 aagagggtcctaactcaaggg 38015544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 16179033 - 16179118
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| |||||||||  |  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||    
T  16179033 tctaggaatggataatccattattagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggg 16179118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 11056531 - 11056568
Alignment:
Q  278 ttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  11056531 ttactttttatgcacacaaacctactgcctcaggcact 11056568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 213
Target Start/End: Complemental strand, 17874613 - 17874582
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactca 213  Q
    ||||||||||||||||||||||||||||||||    
T  17874613 aataggtgcagtgtaccaattaggggaactca 17874582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 1386613 - 1386536
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  1386613 tggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 1386536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 308
Target Start/End: Original strand, 13518493 - 13518523
Alignment:
Q  278 ttactttttatgcacacaaacctactgcctc 308  Q
    |||||||||||||||||||||||||||||||    
T  13518493 ttactttttatgcacacaaacctactgcctc 13518523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 12219875 - 12219939
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| |||  || ||||||||||    
T  12219875 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 12219939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 16790783 - 16790719
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| |||  || ||||||||||    
T  16790783 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 16790719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 37937416 - 37937337
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaatt 93  Q
    ||||| ||||||||| ||  || |||||||||||||||||| ||| |||| ||||| || ||||||| ||||||| |||||    
T  37937416 taggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaacgattattagaccacctaaggaatt 37937337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 33 - 334
Target Start/End: Original strand, 9883 - 10191
Alignment:
Q  33 tttgtgatatta-ggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg 131  Q
    |||||||||||| ||||||| |||||||||| |||||| ||||||| | ||| ||| |||||||||||| || | ||||||||| ||| |||||||||||    
T  9883 tttgtgatattaaggttaactttcttaaaaccttcaaataatattataacacataaggaattagggactctaatctgagaagagggtcctaagtcaaggg 9982  T
Q  132 -----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaag 226  Q
         ||||||||||||| ||||| |||||| ||| || ||||||||||    |||||||||||||||||||||||||||||||||||||||||  ||||    
T  9983 attgattagggctattttggttaaccatcgtgaaattagagaaatattcgaaggaaataggtgcagtgtaccaattaggggaactcagaggattcaaaag 10082  T
Q  227 atctagtctaatctctctctatcttttataaacaacctt-attttatgttatttactttttatgcacacaaacctactgcctcgggcactaaaataaact 325  Q
    |  |||||| |||||||  ||||||||  ||||||  || | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  10083 acatagtctcatctctccttatcttttccaaacaatatttaatttatgttatttactttttatgcaaacaaacctactgcctcgagcactaaaataaact 10182  T
Q  326 ttactcatc 334  Q
    |||| ||||    
T  10183 ttacacatc 10191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 6e-59; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 22 - 307
Target Start/End: Original strand, 5796473 - 5796764
Alignment:
Q  22 ataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtctt 121  Q
    |||||||||  |||||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||||||| || | || ||||| ||||| ||| |    
T  5796473 ataatcgtttatttgtgatataatgttaacgttcttaaaaccttcaaagaatattagatcacctaaggaattagagattgtaatatgataagagggtcct 5796572  T
Q  122 aagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagag 216  Q
    ||||||||||     |||| ||||||||||||| ||||| | |||||| |||| ||||| | |||||||||||  ||||||||||||||||||| || ||    
T  5796573 aagtcaagggattgattagagctattttagttagtcatcatgaaactagagaattattcttaagaaataggtgttgtgtaccaattaggggaacccaaag 5796672  T
Q  217 gatttgaaagatctagtctaatctctctctatcttttataaac-aaccttattttatgttatttactttttatgcacacaaacctactgcct 307  Q
    || | ||||||  |||||| |||||||  |||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  5796673 gactcgaaagacttagtctcatctctccatatcttttctaaacaaactttattttctgttatttactttttatgcacacaaacatattgcct 5796764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 11 - 253
Target Start/End: Complemental strand, 18562737 - 18562490
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||||||||| ||| || |||||||| |||||||| |||||||||||| || ||||||    
T  18562737 tctaggaatggataatcgtttatttgtgatattaggttaacgttcttaaaaccttcgaataatattagctcacctaaggaattagggactgtaatatgag 18562638  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||||||| |||||||| ||     | |||||||||||||||||  |||||||||||| |||| ||||||| |||| |||||||| |||| ||||||||    
T  18562637 aagagagtcctaagtcaaaggattaatcagggctattttagttaactatcgtaaaactagagaagtattcataagaagtaggtgcaatgtatcaattagg 18562538  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatctttt 253  Q
    | |||||||||||||| |||||  | |||| |||||||||||| ||||    
T  18562537 gaaactcagaggattttaaagacatggtctcatctctctctatatttt 18562490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 11 - 319
Target Start/End: Original strand, 16165659 - 16165973
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||| ||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || || | ||||    
T  16165659 tctaggaatgggtaatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtaatctgag 16165758  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||||||||||| |||||  |||||  || || ||||  ||| || | ||||||||||||| |||||||||||    
T  16165759 aagagggtcctaactcaagggattgattagggctatttt-gttaactatcgttgaattagagaatcattaat-acaaataggtgcagtataccaattagg 16165856  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatctttt-ataaacaaccttattttatgttatttactttttatgcacacaaacctac 302  Q
    |||||   || |||| |||||| ||  ||| |||||||||  | ||||||   |||| | |||||||| ||||||||||||||||||||||| || ||||    
T  16165857 ggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatcttattttctgttatttactttttatgcacaccaatctac 16165956  T
Q  303 tgcctcgggcactaaaa 319  Q
    |||||||||||||||||    
T  16165957 tgcctcgggcactaaaa 16165973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 48645385 - 48645663
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  ||  |||||||||||||||||||||||| ||| |||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  48645385 tctaggaatggataatcgtttgttactgatattaggttaacgttcttaaacctt-caaagattattagaccacctaaggaattaggggctgtagtttgag 48645483  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||||||||||| ||||| |||||| |||||| | ||  |||||| |||| |||||||||| |||||||||||    
T  48645484 aagagggtcctaactcaagggattgattagggctatttt-gttaaccatcgtgaaactagaaaatcattcataagaa-taggtgcagtataccaattagg 48645581  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaac--aaccttattttatgttatttactttt 285  Q
    |||||   || |||| |||||||||||||| |||||||  ||| ||||  ||||  | | ||||||| ||||||||||||||    
T  48645582 ggaacatcgatgattcgaaagatctagtctcatctctccatatattttccaaacatatctttattttctgttatttactttt 48645663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 253
Target Start/End: Complemental strand, 13809721 - 13809476
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  |||||||||||| ||||||||||||||||| |||||||| ||||||  ||| ||| ||||||| |  | || ||||||    
T  13809721 tctaggaatggataatcgtttatttgtgatattaagttaacgttcttaaaaccttcaaagagtattaggccacataaggaattagaggttgtaatatgag 13809622  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     | ||||||||||| ||||| |||||| |||||| ||||  |||| | | ||||||||||||| ||||||||| |    
T  13809621 aagagggtcctaagtcaagggattgatcagggctatttt-gttaaccatcgtgaaactagagaatcattcgtaataaataggtgcagtataccaattaag 13809523  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatctttt 253  Q
    |||| |||||||||| ||||||  |  ||| |||||||||||| ||||    
T  13809522 ggaa-tcagaggattcgaaagacttgatctcatctctctctatatttt 13809476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 23225109 - 23224871
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  23225109 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 23225010  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||| ||||||| |||||||||||    
T  23225009 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aatatgtgcagtataccaattagg 23224912  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||||    
T  23224911 ggaacatagatgattcgaaagacctgatctcatctctctct 23224871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 33 - 246
Target Start/End: Complemental strand, 5242334 - 5242116
Alignment:
Q  33 tttgtgatattaggttaacgttcttaaaact-ttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg 131  Q
    |||||||||||| |||||||||||| ||| | |||||||||||||||| ||||||| ||||||||| || |||| |||||| || ||| |||||||||||    
T  5242334 tttgtgatattaagttaacgttctttaaaatcttcaaagaatattagaccacctaaggaattaggggctgtagtctgagaatagggtcctaagtcaaggg 5242235  T
Q  132 -----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaag 226  Q
         ||| || |||||| ||||| ||| || |||||| ||||  |||| | ||||||||||||||| ||||||||| ||||||||||| |||| |||||    
T  5242234 attggttatggatatttt-gttaaccatagtgaaactagagaatcattcgtaagaaataggtgcagtataccaattaagggaactcagaagattcgaaag 5242136  T
Q  227 atctagtctaatctctctct 246  Q
    | ||  ||| ||||||||||    
T  5242135 acctgatctcatctctctct 5242116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 2441482 - 2441362
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||| | ||||||| |||||||||||| |||| ||||    
T  2441482 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattaaaccacctaaggaattagggactgtagtttgag 2441383  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  2441382 aagagggtcctaactcaaggg 2441362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 8276896 - 8277016
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| | ||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| ||||||| ||||    
T  8276896 tctaggaattgataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctatagtttgag 8276995  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  8276996 aagagggtcctaactcaaggg 8277016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 244
Target Start/End: Original strand, 20594182 - 20594409
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    |||||||||||| ||| |||||||||||||||||| |||||| ||| |||||| ||||||| ||||||| ||||||||| || |||| ||||||||| ||    
T  20594182 tggataatcgttttttagtgatattaggttaacgtgcttaaacctt-caaagattattagaccacctaaggaattaggggctgtagtttgagaagagggt 20594280  T
Q  119 cttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactca 213  Q
    | |||||||||||     ||||| ||||||| |||||  ||||| |||||| | ||  |||||| || |||| ||||||| ||||||||||||||||  |    
T  20594281 cctaagtcaagggattgattaggactatttt-gttaactatcgtgaaactagaaaatcattcataag-aatacgtgcagtataccaattaggggaacata 20594378  T
Q  214 gaggatttgaaagatctagtctaatctctct 244  Q
    || |||| |||||| ||  ||| ||||||||    
T  20594379 gatgattcgaaagacctgatctcatctctct 20594409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 13449980 - 13449860
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||| || || |||| ||||    
T  13449980 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaagggctttagtttgag 13449881  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  13449880 aagagggtcctaactcaaggg 13449860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 227
Target Start/End: Original strand, 7227446 - 7227657
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  |||| ||||||| |||||||||| |||||| |||||||||||||||||||  ||| ||||||| | || || |  ||||| || ||    
T  7227446 tggataatcgtttatttgagatattaagttaacgttcgtaaaaccttcaaagaatattagatcatataaggaattagaggctgtaattggagaatagggt 7227545  T
Q  119 cttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactca 213  Q
    | |||||||||||     ||| || |||||| ||||| |||||| |||||| ||||  |||| | ||||||||||||||| ||||||| |||||||| ||    
T  7227546 cctaagtcaagggattgattatggttatttt-gttaaccatcgtgaaactagagaatcattcgtaagaaataggtgcagtataccaatcaggggaac-ca 7227643  T
Q  214 gaggatttgaaaga 227  Q
    ||||||| ||||||    
T  7227644 gaggattcgaaaga 7227657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 17730725 - 17730943
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  ||  ||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| ||||||||| ||||||| ||||    
T  17730725 tctaggaatggataatcgtttgttaatgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggctatagtttgag 17730823  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||||| |||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  17730824 aagagggtcctaagttaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 17730921  T
Q  206 ggaactcagaggatttgaaaga 227  Q
    | |||  ||| |||| ||||||    
T  17730922 gaaacatagatgattcgaaaga 17730943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 4546780 - 4546899
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| |||||||| |||  || |||||||||||||||||| |||||| ||| |||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  4546780 tctaggaatggataattgtttgttagtgatattaggttaacgtgcttaaacctt-caaagattattagaccacctaaggaattaggggctgtagtttgag 4546878  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| |||||||||||    
T  4546879 aagagggtcctaagtcaaggg 4546899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 45287272 - 45287035
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||| ||||||||||||||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  45287272 tctaggaatggataatcctttattagtgatactaggttaacgttctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 45287174  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||  ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  45287173 aagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 45287076  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    | |||  ||| |||| |||||| ||| ||| ||||||||||    
T  45287075 gaaacatagatgattcgaaagacctaatctcatctctctct 45287035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 45290658 - 45290446
Alignment:
Q  36 gtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg---- 131  Q
    |||||| ||||||||||||||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||||||| ||  ||| |||||||        
T  45290658 gtgatactaggttaacgttctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctaactcaagggattg 45290560  T
Q  132 -ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaagatct 230  Q
     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| ||||||||||||||||  ||| |||| |||||| ||    
T  45290559 attaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattaggggaacatagatgattcgaaagacct 45290462  T
Q  231 agtctaatctctctct 246  Q
    | ||| ||||||||||    
T  45290461 aatctcatctctctct 45290446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 26557412 - 26557513
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaa 112  Q
    ||||| ||||||||||||  || |||||||||||||||||| |||||| ||| |||||| ||||||| ||||||| |||||||||||| |||| ||||||    
T  26557412 taggaatggataatcgtttgttagtgatattaggttaacgtgcttaaacctt-caaagattattagaccacctaaggaattagggactgtagtttgagaa 26557510  T
Q  113 gag 115  Q
    |||    
T  26557511 gag 26557513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 4596212 - 4596093
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || ||||| |||  || |||||||||||||||||| |||||| ||| |||||| ||||||| || |||| ||||||||| || |||| ||||    
T  4596212 tctaggaatgaataattgtttgttagtgatattaggttaacgtgcttaaacctt-caaagattattagaccaactaaggaattaggggctgtagtttgag 4596114  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| |||||||||||||||    
T  4596113 aagagggtcttaagtcaaggg 4596093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 13842551 - 13842670
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| | ||||||||||  || |||||||||||||||||||||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  13842551 tctaggaatagataatcgtttgttagtgatattaggttaacgttctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 13842649  T
Q  111 aagagagtcttaagtcaaggg 131  Q
     |||| ||| ||| |||||||    
T  13842650 gagagggtcctaattcaaggg 13842670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 11398221 - 11398143
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||||||||  || |||||||||||||||||| |||||||| |||||||| ||||||| ||||||| |||||||||    
T  11398221 tggataatcgtttgttagtgatattaggttaacgtgcttaaaaccttcaaagattattagaccacctaaggaattaggg 11398143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 317
Target Start/End: Complemental strand, 11398079 - 11397941
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctc--tatcttttataaa-caaccttattttatgttatt 278  Q
    ||||||| |||| ||||||||||||||||   || || | |||||| ||| ||| |||||||||  | ||||||  ||| | | |||||||| |||||||    
T  11398079 aataggtacagtataccaattaggggaacatcgatgaatcgaaagacctaatctcatctctctcattgtcttttccaaaactatcttattttctgttatt 11397980  T
Q  279 tactttttatgcacacaaacctactgcctcgggcactaa 317  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  11397979 tactttttatgcacaccatcctactgcctcgggcactaa 11397941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 6603369 - 6603489
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| ||| |  | ||||||| |||||||  |||||||| || |||| ||||    
T  6603369 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctttaaaccttcgagaattattagaccacctaagaaattaggggctgtagtttgag 6603468  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  6603469 aagagggtcctaactcaaggg 6603489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 9271667 - 9271565
Alignment:
Q  12 ctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgaga 111  Q
    |||||| ||||||||||||  || |||||||| ||||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||  | |||| |||||    
T  9271667 ctaggaatggataatcgtttgttagtgatatttggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggttgtagtttgaga 9271569  T
Q  112 agag 115  Q
    ||||    
T  9271568 agag 9271565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 37415628 - 37415389
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaa--tgaattagggactatagtatg 108  Q
    ||||||| ||||||||| ||  || |||||| ||||||||||||||| |||| |||||||| ||||||| |||||||   ||||||||| || |||| ||    
T  37415628 tctaggaatggataatcctttattagtgatactaggttaacgttctt-aaaccttcaaagattattagaccacctaaggggaattaggggctgtagtttg 37415530  T
Q  109 agaagagagtcttaagtcaag-----ggttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaatta 203  Q
    ||||||| ||  ||| |||||     | ||||| ||||||| |||||  ||| |  ||||| ||||  |||||| || |||||||||||| |||||||||    
T  37415529 agaagagggttctaactcaagagattgattaggactatttt-gttaactatcatggaactagagaatcattcataag-aataggtgcagtataccaatta 37415432  T
Q  204 ggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||  ||| |||| |||||| ||  ||| ||||||||||    
T  37415431 ggggaacatagatgattcgaaagacctgatctcatctctctct 37415389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 26136331 - 26136246
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  26136331 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 26136246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 5826640 - 5826599
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  5826640 ttatttactttttatgcacacaaacctactgcctcaggcact 5826599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 11825287 - 11825246
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  11825287 ttatttactttttatgcacacaaacctactgcctcaggcact 11825246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 4542734 - 4542811
Alignment:
Q  37 tgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagag 115  Q
    ||||||||||||||||| ||| |||| |||||||| ||||||| || |||| ||||||||| || |||| |||||||||    
T  4542734 tgatattaggttaacgtgctt-aaaccttcaaagattattagaccaactaaggaattaggggctgtagtttgagaagag 4542811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 9132963 - 9132878
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  9132963 tctaggaatggataatcatttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 9132878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 26144711 - 26144626
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||  || |||| ||||||| |||||||||    
T  26144711 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaaggttactagaccacctaaggaattaggg 26144626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 37166350 - 37166265
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  37166350 tctaggaatggataatcatttattagtgatattaggttaacgtgctt-aaacattcaaaggttattagaccacctaaggaattaggg 37166265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 26153340 - 26153385
Alignment:
Q  264 ttattttatgttatttacttttta-tgcacacaaacctactgcctc 308  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  26153340 ttattttctgttatttactttttattgcacacaaacctactgcctc 26153385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 9864930 - 9864810
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||| |||||||| ||| |||| ||| |  | ||||||| ||||||| |||||| ||  | |||| ||||    
T  9864930 tctaggaatggataatcgtttgttagtgatattaagttaacgtgctttaaaccttcgagaattattagaccacctaaggaattatgggttgtagtttgag 9864831  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  9864830 aagagggtcctaactcaaggg 9864810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 10469228 - 10469292
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||||||| ||||||||||||  ||| |||| ||||||||||  || ||||||||||    
T  10469228 aataggtgcagtgtactaattaggggaacatagatgattcgaaagatctaaactcatctctctct 10469292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 37423160 - 37423085
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaa 87  Q
    ||||||| ||||||||| ||  || |||||| ||||||||||||||| |||| |||||||| ||||||| |||||||    
T  37423160 tctaggaatggataatcctttattagtgatactaggttaacgttctt-aaaccttcaaagattattagaccacctaa 37423085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 24918113 - 24918212
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||   |||| |||||||||||||  | | ||||||||||  |||||||||| ||| ||| |||||||||| | || | ||||||||||||    
T  24918113 tggataatcgtttaattgtaatattaggttaacactttgaaaactttcagggaatattagaccacataaggaattagggagtgtaatctgagaagagagt 24918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 2090656 - 2090710
Alignment:
Q  146 gttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaa 200  Q
    ||||||||||||||||||| ||||||||||||   |||||| |||||| ||||||    
T  2090656 gttaatcatcgtaaaactaaagaaatattcatataaaatagatgcagtttaccaa 2090710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 3068180 - 3068095
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || ||||||||||||||| || ||| |||| ||||| || ||||||| ||||||| |||||||||    
T  3068180 tctaggaatggataatcttttattagtgatattaggttaatgtgctt-aaaccttcaacgattattagaccacctaaggaattaggg 3068095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 10469055 - 10469140
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| | ||||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  10469055 tctaggaatagataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 10469140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 366
Target Start/End: Complemental strand, 18560104 - 18560054
Alignment:
Q  316 aaaataaactttactcatcttatttcataacgcaattgtttacttgagatt 366  Q
    |||||||||||||| |||| ||||| |||| || |||||||||||||||||    
T  18560104 aaaataaactttacacatcctatttaataatgctattgtttacttgagatt 18560054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 2090539 - 2090600
Alignment:
Q  34 ttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattag 95  Q
    |||||||| |||||||||| | | ||||| ||  | ||||||||||||||||||||||||||    
T  2090539 ttgtgatactaggttaacggtttgaaaacctttgaggaatattagatcacctaatgaattag 2090600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 4695435 - 4695484
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaa 60  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||||||    
T  4695435 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcttaaa 4695484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 8398021 - 8398058
Alignment:
Q  278 ttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  8398021 ttactttttatccacacaaacctactgcctcaggcact 8398058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 18560222 - 18560169
Alignment:
Q  201 ttaggggaactcagaggatttgaaagatctagtctaatctctctctatctttta 254  Q
    |||||||||||||||||||| |||||| || |||| |||||||| ||| |||||    
T  18560222 ttaggggaactcagaggattcgaaagacctggtctcatctctctatatttttta 18560169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 8258074 - 8258126
Alignment:
Q  264 ttattttatgttatttacttttta-tgcacacaaacctactgcctcgggcact 315  Q
    ||||||| |||||||||||||||| | |||||||||||||| |||| ||||||    
T  8258074 ttattttctgttatttactttttattacacacaaacctactacctcaggcact 8258126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 10345279 - 10345343
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| |||  || ||||||||||    
T  10345279 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 10345343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 20080921 - 20080830
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactata 103  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| ||||  || ||||||| |||||||  |||||||| |||||    
T  20080921 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcagcgattattagaccacctaagaaattagggtctata 20080830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 26144538 - 26144474
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| |||  || ||||||||||    
T  26144538 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 26144474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 230
Target Start/End: Original strand, 108 - 330
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||| ||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  108 tctaggaatgaataatcctttattagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 207  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||||||||||| |||||||     ||| | ||||||| |||||  |||||||||||| | ||  |||||| || |||||||||||| |||||||||||    
T  208 aagagagtcttaactcaagggattgattaagactatttt-gttaactatcgtaaaactagaaaatcattcataag-aataggtgcagtataccaattagg 305  T
Q  206 ggaactcagaggatttgaaagatct 230  Q
    |||||  ||| |||| |||||||||    
T  306 ggaacatagatgattcgaaagatct 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 253
Target Start/End: Original strand, 4868168 - 4868419
Alignment:
Q  6 attattctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagt 105  Q
    |||| ||||||| ||||||||  ||  ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||| | ||| || |    
T  4868168 attagtctaggaatggataattttttatttgtgatattaggtgaacgttcttaaaaccttcaaagaatattagatcacctaaggaattatgaactgtaat 4868267  T
Q  106 atgagaagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaa 200  Q
      |||||||| ||| |||||||||||     ||||||||| ||||||||| |||||| ||||||||| | |||| ||  |||||||||||||| ||||||    
T  4868268 ccgagaagagggtcctaagtcaagggattgattagggcta-tttagttaaccatcgtgaaactataggagtattaataggaaataggtgcagtataccaa 4868366  T
Q  201 ttaggggaactcagaggatttgaaagatctagtctaatctctctctatctttt 253  Q
      | || |  || ||||||| |||||| ||||||| |||||| | ||||||||    
T  4868367 acatggaacatcggaggattcgaaagacctagtctcatctctatatatctttt 4868419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 18721480 - 18721246
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| || ||||  |||||||| || |||||||||    
T  18721480 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccaactaagaaattaggggctgtagtatgag 18721381  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||||||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  18721380 aagagagtcataactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 18721283  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctct 242  Q
    |||||  ||| |||| |||||| ||||||| ||||||    
T  18721282 ggaacatagatgattcgaaagacctagtctcatctct 18721246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 25591678 - 25591476
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || ||||||||||||||||||||||||||| |||||||| ||||||| || |||| ||||||||| || |||| ||||    
T  25591678 tctaggaatggataatcctttattagtgatattaggttaacgttcttaaaaccttcaaagattattagaccatctaaggaattaggggctgtagtttgag 25591579  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||||||||||| |||||||     ||||| ||||||| |||||  ||||| |||||| | ||  |||||| | ||||||||||||| |||||||||||    
T  25591578 aagagagtcttaactcaagggattgattaggactatttt-gttaactatcgtgaaactagaaaatcattcat-aaaaataggtgcagtataccaattagg 25591481  T
Q  206 ggaac 210  Q
    |||||    
T  25591480 ggaac 25591476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 45155468 - 45155150
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||||||||||||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  45155468 tctaggaatggataatcgtttattagtgatattaggttaacgtacttaaaactttcaaagattattagaccacctaaggaattaggggttttagtttgag 45155369  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||||||| |||||||     ||||| ||||||| |||||  ||||  |||||| ||||  |||||| || |||||||||| | |||||||||||    
T  45155368 aagagggtcttaactcaagggattgattaggactatttt-gttaactatcgcgaaactagagaatcattcataag-aataggtgcaatataccaattagg 45155271  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatctttt--ataaacaaccttattttatg-ttatttactttttatgcacacaaacct 300  Q
    |||||  ||| |||| |||||| ||  ||| | |||||||  ||||||||  | ||  | | ||||||| || |||||||  |||||||||  |||| ||    
T  45155270 ggaacatagatgattcgaaagacctgatctcagctctctccttatcttttccaaaactatctttattttctgtttattta-attttatgcaatcaaaact 45155172  T
Q  301 actgcctcgggcactaaaataa 322  Q
    ||||||||||||||||||||||    
T  45155171 actgcctcgggcactaaaataa 45155150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 319
Target Start/End: Complemental strand, 36710835 - 36710522
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| ||| |  | ||||||| ||||||| |||||||||  | |||| ||||    
T  36710835 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctttaaaccttcgagaattattagaccacctaaggaattaggggttgtagtttgag 36710736  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||||||||||| |||||  |||||  ||||| | ||  ||| ||  ||| |||||||||| |||||||||||    
T  36710735 aagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaaaatcattaatacgaa-taggtgcagtataccaattagg 36710638  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctc--tatcttttataaa-caaccttattttatgttatttactttttatgcacacaaacctac 302  Q
    |||||   || |||| |||||| ||  ||| |||||||||  | ||||||  ||| | | |||||||| ||||||||||||||||||||||| |||||||    
T  36710637 ggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatcttatttt-tgttatttactttttatgcacaccaacctac 36710539  T
Q  303 tgcctcgggcactaaaa 319  Q
    ||||| |||||||||||    
T  36710538 tgccttgggcactaaaa 36710522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 22174122 - 22174002
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  22174122 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaaggaattaggggttgtagtttgag 22174023  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  22174022 aagagggtcctaactcaaggg 22174002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 25594856 - 25594655
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  ||  |||||||||||||||||||||||||| |||||||| ||||||| || |||| |||||| || || |||| ||||    
T  25594856 tctaggaatggataatcctttattactgatattaggttaacgttcttaaaaccttcaaagattattagaccatctaaggaattatgggctgtagtttgag 25594757  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||||||||||| |||||||     ||||| ||||||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| ||| |||||||    
T  25594756 aagagagtcttaactcaagggattgattaggactatttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtatactaattagg 25594659  T
Q  206 ggaa 209  Q
    ||||    
T  25594658 ggaa 25594655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 14589646 - 14589506
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctc--tatcttttataaa-caaccttattttatgttatt 278  Q
    |||||||||||| ||||||||||||||||   || |||| |||| | ||| ||| |||||||||  | ||||||  ||| | | ||||||||||||||||    
T  14589646 aataggtgcagtataccaattaggggaacatcgatgattcgaaatacctaatctcatctctctccttgtcttttccaaaactatcttattttatgttatt 14589547  T
Q  279 tactttttatgcacacaaacctactgcctcgggcactaaaa 319  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  14589546 tactttttatgcacaccaacctactgcctcgggcactaaaa 14589506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 21279967 - 21279766
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||| | |||||| ||| |||||| ||||||| ||||||| ||||||||| || |||| | ||    
T  21279967 tctaggaatggataatcgtttgttagtgatattaggttaacatgcttaaacctt-caaagattattagaccacctaaggaattaggggctgtagtttaag 21279869  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||||||||||| |||||||     ||||| ||||||| |||||  ||| |  ||||| ||||  |||||| || |||||||||||| |||||||||||    
T  21279868 aagagagtcttaactcaagggattgattaggactatttt-gttaactatcatgtaactagagaatcattcataag-aataggtgcagtataccaattagg 21279771  T
Q  206 ggaac 210  Q
    |||||    
T  21279770 ggaac 21279766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 43682069 - 43681949
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||||||||||||| | |||||||| ||||||||||||||| |||||||  |||||||||||| || ||||||    
T  43682069 tctaggaatggataatcctttattagtgatattaggttaacatgcttaaaaccttcaaagaatattagctcacctacggaattagggactgtaatatgag 43681970  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  43681969 aagagggtcctaactcaaggg 43681949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 38248597 - 38248495
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    |||||| |||||||||||||  || |||||||||||||||||| || |||||||||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  38248597 tctaggtttggataatcgtttattagtgatattaggttaacgtact-aaaactttcaaagattattagaccacctaaggaattaggggctgtagtttgag 38248499  T
Q  111 aaga 114  Q
    ||||    
T  38248498 aaga 38248495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 14421673 - 14421785
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||| ||  || |||||| |||||||||||||||||||| |||||||| ||| ||| ||||||| ||||||||| || |||| ||||||||| ||    
T  14421673 tggataatcctttattagtgatactaggttaacgttcttaaaaccttcaaagattatcagaccacctaaggaattaggggctgtagtttgagaagagggt 14421772  T
Q  119 cttaagtcaaggg 131  Q
    | ||| |||||||    
T  14421773 cctaactcaaggg 14421785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 25231003 - 25231220
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaa 112  Q
    ||||| ||||||||||||  || |||||||||||||||| | |||||||| |||||| | ||||||| |||| || ||||||| | || |||| ||||||    
T  25231003 taggaatggataatcgtttattagtgatattaggttaacatacttaaaaccttcaaatattattagaacacccaaggaattagaggctttagtttgagaa 25231102  T
Q  113 gagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagggg 207  Q
    ||| ||| ||| |||||||     ||| | ||||||| |||||  |||||  ||||| ||||  |||||| || |||||||||||| |||||||||||||    
T  25231103 gagggtcctaactcaagggattgattaagactatttt-gttaactatcgtggaactagagaatcattcataag-aataggtgcagtataccaattagggg 25231200  T
Q  208 aactcagaggatttgaaaga 227  Q
    |||  ||| |||| ||||||    
T  25231201 aacatagatgattcgaaaga 25231220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 5613923 - 5613638
Alignment:
Q  7 ttattctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttc-aaagaatattagatcacctaatgaattagggac--tata 103  Q
    ||||||||||  || |||||||||  |||||||||||| ||||||||||||||||| ||| ||| ||||||| | ||||||| ||||||||| |  ||||    
T  5613923 ttattctaggtatgcataatcgtttatttgtgatattaagttaacgttcttaaaaccttcaaaaaaatattataccacctaaggaattaggggctatata 5613824  T
Q  104 gtatgagaagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtacc 198  Q
     | ||||||||| ||| |||||||||||     ||||| ||||| | |||||  ||||| |||||| ||||  |||||| || |||| |||  |||| ||    
T  5613823 atctgagaagagggtcctaagtcaagggatttattaggactattat-gttaactatcgtgaaactagagaatcattcataag-aatatgtgatgtgtgcc 5613726  T
Q  199 aattaggggaactcagaggatttgaaagatctagtctaatctctctctatcttttataaac--aaccttattttatgttatttactttt 285  Q
    |||||||||||  ||||||||| |||||| ||  ||| ||||||||| || |||| ||| |  | | ||||||||||||||||| ||||    
T  5613725 aattaggggaa-acagaggattcgaaagacctgatctcatctctctccatattttctaatccaatctttattttatgttatttaatttt 5613638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 23643740 - 23643858
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||||||| || ||||| ||||||| ||||||| ||||||| | || || | ||||    
T  23643740 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcttaaaacctttaaagattattagaccacctaaggaattagaggctgtaatctgag 23643839  T
Q  111 aagagagtcttaagtcaag 129  Q
    ||||| ||| ||| |||||    
T  23643840 aagagggtcataactcaag 23643858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 227
Target Start/End: Original strand, 30784862 - 30785059
Alignment:
Q  34 ttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg-- 131  Q
    |||||||||||||||||||||| |||||| |||| ||||  ||| ||||||||| ||||||| |||| || |  |||||||| ||| || ||| | ||      
T  30784862 ttgtgatattaggttaacgttcgtaaaaccttcagagaactttaaatcacctaaggaattagagactgtaatccgagaagagggtcctacgtccatggat 30784961  T
Q  132 ---ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaaga 227  Q
       |||||| |||||| |||||  ||||| |||||| ||||  |||| | |||||||||| || | ||||||||||||||||| |||||||| ||||||    
T  30784962 tgattagggttatttt-gttaactatcgtgaaactagagaatcattcgtaagaaataggtacaatataccaattaggggaacttagaggattcgaaaga 30785059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 5980503 - 5980392
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| |||||||  ||||| ||||| |||| ||||||||| ||    
T  5980503 tggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaagaaattacggactgtagtttgagaagagggt 5980405  T
Q  119 cttaagtcaaggg 131  Q
    | ||| |||||||    
T  5980404 cctaactcaaggg 5980392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 12516652 - 12516532
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||| ||||| || | |||||| ||||||||||||||||||| |||| |||||||||| | || | | ||    
T  12516652 tctaggaatggataatcgtttgttagtgatattatgttaaagtgcataaaaccttcaaagaatattagatcaactaaggaattagggattgtaatctaag 12516553  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  12516552 aagagggtcctaactcaaggg 12516532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 12582929 - 12583048
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| | |||||| |||  || ||||||||||||||||||||||||| ||| |||||| ||||| | ||||||| |||||||||  | |||| ||||    
T  12582929 tctaggaatagataattgtttgttagtgatattaggttaacgttcttaaacctt-caaagattattacaccacctaaggaattaggggttgtagtttgag 12583027  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| |||||||||||    
T  12583028 aagagggtcctaagtcaaggg 12583048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 18824593 - 18824473
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| ||| |  | ||||||| ||||||| ||||||||| || |||| ||||    
T  18824593 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctttaaaccttcgagaattattagaccacctaaggaattaggggctgtagtttgag 18824494  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  18824493 aagagggtcctaactcaaggg 18824473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 16953697 - 16953935
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  ||  |||||||||||||| || ||| |||| ||| |  | ||||||| | ||||| ||||||||| || |||| ||||    
T  16953697 tctaggaatggataatcgtttgttaatgatattaggttaatgtgctttaaaccttcgagaattattagaccgcctaaggaattaggggctgtagtttgag 16953796  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  16953797 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 16953894  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||||    
T  16953895 ggaacatagatgattcgaaagacctgatctcatctctctct 16953935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 18826086 - 18825966
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  || |||||||||||||||||| ||| |||| ||| |  | ||||||| ||||||| ||||||||| || |||| ||||    
T  18826086 tctaggaatgaataatcgtttgttagtgatattaggttaacgtgctttaaaccttcgagaattattagaccacctaaggaattaggggctgtagtttgag 18825987  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  18825986 aagagggtcctaactcaaggg 18825966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 8911743 - 8911805
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||||||||| |||||||||||||||||||||||||| |||||| |||  || ||||||||    
T  8911743 aataggtgcagtataccaattaggggaactcagaggattcgaaagacctaaacttatctctct 8911805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 17930904 - 17931021
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaa 112  Q
    ||||| ||||||||||||  || ||||||| || | ||||| ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||||    
T  17930904 taggaatggataatcgtttgttagtgatataagatcaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgagaa 17931002  T
Q  113 gagagtcttaagtcaaggg 131  Q
    ||| ||| ||| |||||||    
T  17931003 gagggtcgtaactcaaggg 17931021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 30645661 - 30645713
Alignment:
Q  264 ttattttatgttatttactttttat-gcacacaaacctactgcctcgggcact 315  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||    
T  30645661 ttattttctgttatttactttttattgcacacaaacctactgcctcaggcact 30645713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 31981536 - 31981588
Alignment:
Q  264 ttattttatgttatttactttttat-gcacacaaacctactgcctcgggcact 315  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||    
T  31981536 ttattttctgttatttactttttattgcacacaaacctactgcctcaggcact 31981588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 33883289 - 33883234
Alignment:
Q  264 ttattttatgttatttactttttatgcacacaaacctactgcctcgggcactaaaa 319  Q
    ||||||| ||||||||||||||||| ||||| |||||||| ||| |||||||||||    
T  33883289 ttattttctgttatttactttttatacacaccaacctactaccttgggcactaaaa 33883234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 5964443 - 5964484
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcctcgggcact 315  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  5964443 ttatttactttttatgcacacaaacctactgtctcaggcact 5964484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 307
Target Start/End: Original strand, 20262742 - 20262775
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcct 307  Q
    ||||||||||||||||||||||||||||||||||    
T  20262742 ttatttactttttatgcacacaaacctactgcct 20262775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 307
Target Start/End: Original strand, 21049372 - 21049405
Alignment:
Q  274 ttatttactttttatgcacacaaacctactgcct 307  Q
    ||||||||||||||||||||||||||||||||||    
T  21049372 ttatttactttttatgcacacaaacctactgcct 21049405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 10498404 - 10498175
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagt 118  Q
    ||||||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| ||||||||| || ||     ||||||| ||    
T  10498404 tggataatcctttattagtgatattaggttaacgtactt-aaaccttcaaaggttattagaccacctaaggaattaggggctgtaaccctagaagagggt 10498306  T
Q  119 cttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactca 213  Q
    | ||| |||||||     ||||| ||||||| |||||  ||||||||||||  ||   |||||  || |||||||||||| ||||||||||||||||  |    
T  10498305 cctaactcaagggattgattaggactatttt-gttaactatcgtaaaactagggactcattcacaag-aataggtgcagtataccaattaggggaacata 10498208  T
Q  214 gaggatttgaaagatctagtctaatctctctct 246  Q
    || |||| |||||| |||  || ||||||||||    
T  10498207 gatgattcgaaagacctaaactcatctctctct 10498175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 13196778 - 13196897
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| | | |||| |||||||| |||||||  ||||||  ||||||||  | ||||  |||    
T  13196778 tctaggaatggataatcgtttgttagtgatattaggttaacgtgc-tcaaaccttcaaagattattagactacctaagaaattaggggttgtagttcgag 13196876  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  13196877 aagagggtcctaactcaaggg 13196897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 14188361 - 14188399
Alignment:
Q  277 tttactttttatgcacacaaacctactgcctcgggcact 315  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  14188361 tttactttttatacacacaaacctactgcctcaggcact 14188399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 23619562 - 23619477
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||| ||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  23619562 tctaggaatggataatcatttattagtgaaattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 23619477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 31284595 - 31284680
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| ||||| |  ||||||| ||||||| |||||||||    
T  31284595 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcaacggttattagaccacctaaggaattaggg 31284680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 31986463 - 31986508
Alignment:
Q  264 ttattttatgttatttacttttta-tgcacacaaacctactgcctc 308  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||||    
T  31986463 ttattttctgttatttactttttattgcacaaaaacctactgcctc 31986508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 23619389 - 23619325
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| |||  || ||||||||||    
T  23619389 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 23619325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 12 - 308
Target Start/End: Complemental strand, 48601 - 48302
Alignment:
Q  12 ctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgaga 111  Q
    |||||| ||||||||||||  |||||||||||| |||||| ||| |||||| ||||||||||||| |||||||||| |||||||||||  || | |||||    
T  48601 ctaggaatggataatcgtttatttgtgatattatgttaacattcataaaaccttcaaagaatattggatcacctaaggaattagggaccgtaatctgaga 48502  T
Q  112 agagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggg 206  Q
    |||| ||| || ||||||||     ||| | ||||||||||| | |||||| |||||| ||||||||| ||  |||||||||||||| ||| ||  |       
T  48501 agagggtcctacgtcaagggattgattatgactattttagttgaccatcgtgaaactagagaaatatttataggaaataggtgcagtatactaaaaa--- 48405  T
Q  207 gaactcagaggatttgaaagatctagtctaatctctctctatcttttataaacaacc-ttattttatg-ttatttactttttatgcacacaaacctactg 304  Q
     || |||||||||||||| || ||||||| |||||||  ||| |||| ||||||||| |||| ||  | |||||||| |||||||||  |||||||||||    
T  48404 taaatcagaggatttgaatgacctagtctcatctctccatatattttctaaacaacctttatattccgtttatttac-ttttatgcaatcaaacctactg 48306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 2418 - 2538
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||    
T  2418 tctaggaatggataatcctttattagtgatattaggttaacgtgcttaaaacgttcaaagaatattagctcacctaaggaattagggactgtagtatgag 2517  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  2518 aagagggtcctaactcaaggg 2538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 313
Target Start/End: Original strand, 19319 - 19627
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||  ||||||| ||||||| ||||||||| || |||| ||||    
T  19319 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagtttattagaccacctaaggaattaggggctgtagtttgag 19418  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||||||  ||| |||||||     ||| | ||||||| |||||  |||||  ||||| ||||  |||||| || |||||||||||| ||||||||||     
T  19419 aagagagttctaactcaagggattgattatgactatttt-gttaactatcgtggaactagagaatcattcataag-aataggtgcagtataccaattaga 19516  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct--atcttttataaacaaccttattttatgttatttactttttatgcaca-caaacctac 302  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||||   |||||   |  | | |||||||| |||||||||||||||||||| | |||| ||||    
T  19517 ggaacatagatgattcgaaagacctgatctcatctctctctcattctttccaactctatcttattttctgttatttactttttatgcaaaccaaaactac 19616  T
Q  303 tgcctcgggca 313  Q
    ||||| |||||    
T  19617 tgcctagggca 19627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 5597 - 5361
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || ||||||||||| |||||||||||||||||||||||| ||||||| ||||||| |||| |||| || |||| ||||    
T  5597 tctaggaatggataatcctttattagtgatattaggctaacgttcttaaaactttcaaagattattagaccacctaaggaatcaggggctgtagtttgag 5498  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||||||| |||| ||     ||||| ||||||| |||||  ||||| |||||| | ||  |||||| || |||||||||||| |||||||||||    
T  5497 aagagggtcttaactcaaaggattgattaggactatttt-gttaactatcgtgaaactagaaaatcattcataag-aataggtgcagtataccaattagg 5400  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  5399 ggaacatagatgattcgaaagacctgatctcatctctct 5361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 319
Target Start/End: Original strand, 89693 - 90007
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||| |||||||| ||| |||| ||| |  | ||||||| ||||||| ||||||||| || |||| ||||    
T  89693 tctaggaatggataatcgtttgttagtgatattaagttaacgtgcttcaaaccttcgagaattattagaccacctaaggaattaggggctgtagtttgag 89792  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||||||| ||| |||||||     ||||||||||||| |||||  |||||  ||||| | ||  ||| || |  |||| ||||||| |||||||||||    
T  89793 aagagagtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaaaatcattaat-acgaatatgtgcagtataccaattagg 89890  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatcttttat---aaacaaccttattttatgttatttactttttatgcacacaaacctac 302  Q
    |||||| ||| |||| |||||| ||  ||| |||||||||  | | || |   |||| | |||||||| |||||||| |||||||||||||| |||||||    
T  89891 ggaacttagatgattcgaaagacctgatctcatctctctccttgtgttttccaaaactatcttattttctgttatttgctttttatgcacaccaacctac 89990  T
Q  303 tgcctcgggcactaaaa 319  Q
    |||||| ||||||||||    
T  89991 tgcctcaggcactaaaa 90007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 54 - 273
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||| |||||||| ||||||| |||||||  |||||||| || |||| ||||    
T  54 tctaggaatggataatcgtttgttagtgatattaggttaacgttcttaaaaccttcaaagattattagaccacctaagaaattaggggctgtagtttgag 153  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  154 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 251  T
Q  206 ggaactcagaggatttgaaaga 227  Q
    |||||  ||| |||| ||||||    
T  252 ggaacatagatgattcgaaaga 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 3987 - 3749
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  3987 tctaggaatggataatcgtttgttagtgatattaggttaatgttcttaaaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 3888  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  3887 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 3790  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    | |||  ||| |||| |||||| ||  ||| ||||||||||    
T  3789 gtaacatagatgattcgaaagacctgatctcatctctctct 3749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 198071 - 198306
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| |||||| ||| |||||| ||||||| ||||||| ||||||| | ||||||| ||||    
T  198071 tctaggaatggataatcatttgttagtgatattaggttaacgtgcttaaacctt-caaagattattagaccacctaaggaattagaggctatagtttgag 198169  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     ||||| ||||||| |||||  |||||  ||||| | || ||||||| || |||||||||||| |||||||||||    
T  198170 aagagggtcctaagtcaagggattgattaggactatttt-gttaactatcgtggaactagaaaattattcataag-aataggtgcagtataccaattagg 198267  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  198268 ggaacatagatgattcgaaagacctgatctcatctctct 198306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 8417 - 8298
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  ||||||||||||||||||||| |||||| ||| |||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  8417 tctaggaatggataatcgtttgtttgtgatattaggttaacgtgcttaaacctt-caaagattattagaccacctaaggaattaggggctgtagtttgag 8319  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| |||||||||||    
T  8318 aagagggtcctaagtcaaggg 8298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 1746 - 1627
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| ||||||| ||||| ||||||| ||||||| |||||||||  | |||| ||||    
T  1746 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaacttttaaagattattagaccacctaaggaattaggggttgtagtttgag 1648  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||  ||| |||||||||||    
T  1647 aagacggtcctaagtcaaggg 1627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 19272 - 19392
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| | |||||| |||||||| ||||||||||||||| ||||||||| || |||| ||||    
T  19272 tctaggaatggataatcgtttgttagtgatattaggttaacgtgcataaaaccttcaaagattattagatcacctaaggaattaggggctgtagtttgag 19371  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  19372 aagagggtcctaactcaaggg 19392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 62441 - 62659
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| ||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  62441 tctaggaatggataatcgtttgttagtgatattaggttaacgtgctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgag 62539  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| ||| |||||||     ||||| ||||||| |||||  |||||  ||||| | ||  |||||| || |||||||||||| |||||||||||    
T  62540 aagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataag-aataggtgcagtataccaattagg 62637  T
Q  206 ggaactcagaggatttgaaaga 227  Q
    |||||  ||| |||| ||||||    
T  62638 ggaacatagatgattcgaaaga 62659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 63783 - 63874
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactata 103  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| ||| |||  ||||| | ||||||| ||||||||| |||||    
T  63783 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcgaaggttattataccacctaaggaattaggggctata 63874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 5276 - 5395
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||| ||||||  || ||||||||||||||||||||||||| ||| |||||| ||||||| ||||||| ||||||||| || |||| ||||    
T  5276 tctaggaatggatgatcgtttgttagtgatattaggttaacgttcttaaacctt-caaagattattagaccacctaaggaattaggggctgtagtttgag 5374  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| |||||||||||    
T  5375 aagagggtcctaagtcaaggg 5395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 3480 - 3377
Alignment:
Q  12 ctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgaga 111  Q
    |||||| ||||||||||||  || |||||||||||| ||| | |||||||| ||||||||||||||| |||||||| |||||||||||| || |||||||    
T  3480 ctaggaatggataatcgtttgttagtgatattaggtaaacatgcttaaaaccttcaaagaatattagctcacctaaggaattagggactgtaatatgaga 3381  T
Q  112 agag 115  Q
    ||||    
T  3380 agag 3377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 27033 - 27268
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || |||||||||||||||||| |||||| ||| |||||| ||||| | ||||||| ||||||||| || |||| ||||    
T  27033 tctaggaatggataatcgtttgttcgtgatattaggttaacgtgcttaaacctt-caaagattattacaccacctaaggaattaggggctgtagtttgag 27131  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| |||||||||||| ||     ||||| ||||||| |||||  ||| |  ||||| ||||  |||||| || ||||| |||||| |||||||||||    
T  27132 aagagggtcttaagtcaatggattgattaggactatttt-gttaactatcatggaactagagaatcattcataag-aatagatgcagtataccaattagg 27229  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctct 244  Q
    |||||  ||| |||| |||||| ||  ||| ||||||||    
T  27230 ggaacatagatgattcgaaagacctgatctcatctctct 27268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 292949 - 293165
Alignment:
Q  13 taggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaa 112  Q
    ||||| ||||||||| ||  || |||||| ||||||||||||||| |||| |||||||| ||||||| ||||||| ||||||||| || |||| ||||||    
T  292949 taggaatggataatcctttattagtgatactaggttaacgttctt-aaaccttcaaagattattagaccacctaaggaattaggggctgtagtttgagaa 293047  T
Q  113 gagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagggg 207  Q
    ||| ||  ||| |||||||     ||||| ||||||| |||||  |||||  ||||| ||||  |||||| || |||||||||||| |||||||||||||    
T  293048 gagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaactagagaatcattcataag-aataggtgcagtataccaattagggg 293145  T
Q  208 aactcagaggatttgaaaga 227  Q
    |||  ||| |||| ||||||    
T  293146 aacatagatgattcgaaaga 293165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 319
Target Start/End: Complemental strand, 118644 - 118333
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  ||||||||||||||||||||    |||||| ||||||||||||||||||| |||| ||||||  |||| ||    | |    
T  118644 tctaggaatggataatcgtttatttgtgatattaggttaacgcatgtaaaaccttcaaagaatattagatcatctaaggaattatagactgtaacccgcg 118545  T
Q  111 aagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattagg 205  Q
    ||||| ||| |||||||||||     |||| |||||||| |||||  ||| | ||||||  |||  |||||| || ||||||||||||| |||||||| |    
T  118544 aagagggtcctaagtcaagggattgattagtgctatttt-gttaactatcctgaaactagcgaatcattcataag-aataggtgcagtggaccaattaag 118447  T
Q  206 ggaactcagaggatttgaaagatctagtctaatctctctctatcttttata-aacaaccttattttatgttatttactttttatgca-cacaaacctact 303  Q
    ||||  ||||||||| |||||| ||  | | |||||||   |||||||  | ||| | |||||||| |||||||||| |||||||||  |||||| ||||    
T  118446 ggaa-acagaggattcgaaagacctgatatcatctctcctcatcttttccagaactatcttattttctgttatttac-ttttatgcataacaaacatact 118349  T
Q  304 gcctcgggcactaaaa 319  Q
    ||||||||||||||||    
T  118348 gcctcgggcactaaaa 118333  T

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Target: scaffold0270 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 262 - 142
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||| ||||| || ||||| ||||||| | |||||  |||||||| || |||| ||||    
T  262 tctaggaatggataatcgtttgttagtgatattaggttaacgttctaaaaaccttgaaagattattagaccgcctaagaaattaggggctgtagtttgag 163  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  162 aagagggtcctaactcaaggg 142  T

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Target: scaffold0690 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 7651 - 7596
Alignment:
Q  264 ttattttatgttatttactttttatgcacacaaacctactgcctcgggcactaaaa 319  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7651 ttattttctgttatttactttttatgcacaccaacctactgcctcgggcactaaaa 7596  T

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Target: scaffold1755 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 45 - 164
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| |||||| ||| |||||| ||||||| |||||||  |||||||||||  ||| ||||    
T  45 tctaggaatggataatcctttgttagtgatattaggttaacgtgcttaaacctt-caaagattattagaccacctaagcaattagggactgaagtttgag 143  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| ||| |||||||    
T  144 aagagggtcctaactcaaggg 164  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 241449 - 241645
Alignment:
Q  36 gtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtcttaagtcaaggg---- 131  Q
    |||||| |||||||| || |||||| ||| |||||| ||||||| ||||||| ||||||||| ||  ||| ||||||||| ||| ||| |||||||        
T  241449 gtgatactaggttaatgtgcttaaacctt-caaagattattagaccacctaaggaattagggcctgcagtttgagaagagggtcctaactcaagggattg 241547  T
Q  132 -ttagggctattttagttaatcatcgtaaaactatagaaatattcatgagaaataggtgcagtgtaccaattaggggaactcagaggatttgaaagatct 230  Q
     ||| | ||||||| |||||  |||||  ||||| ||||  |||||| | ||||||||||||| ||||||||||||||||  ||| |||| |||||||||    
T  241548 attacgactatttt-gttaactatcgtggaactagagaatcattcataa-aaataggtgcagtataccaattaggggaacatagatgattcgaaagatct 241645  T

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Target: scaffold0066 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 57780 - 57712
Alignment:
Q  19 tggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaa 87  Q
    ||||||||||||  || ||||||||| |||||||||| |||||| |||||||| ||||||| |||||||    
T  57780 tggataatcgtttattagtgatattaagttaacgttcgtaaaaccttcaaagagtattagaccacctaa 57712  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 223895 - 223947
Alignment:
Q  264 ttattttatgttatttactttttat-gcacacaaacctactgcctcgggcact 315  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||    
T  223895 ttattttctgttatttactttttattgcacacaaacctactgcctcaggcact 223947  T

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Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 228821 - 228866
Alignment:
Q  264 ttattttatgttatttacttttta-tgcacacaaacctactgcctc 308  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||||    
T  228821 ttattttctgttatttactttttattgcacaaaaacctactgcctc 228866  T

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Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 248442 - 248561
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgag 110  Q
    ||||||| || |||||||||  || |||||||||||||||| |  ||||| ||| |||||| ||||||| ||||||| |||||||||  | |||| || |    
T  248442 tctaggaatgaataatcgtttgttagtgatattaggttaacatgattaaacctt-caaagattattagaccacctaaggaattaggggttgtagtttgtg 248540  T
Q  111 aagagagtcttaagtcaaggg 131  Q
    ||||| ||| |||||||||||    
T  248541 aagagggtcctaagtcaaggg 248561  T

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Target: scaffold1809 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 1 - 109
Alignment:
Q  22 ataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactatagtatgagaagagagtctt 121  Q
    |||||||||  || |||||||||||||||| | |||||| |||||||||| |||| || |||||||  ||||||||  | |||| |||||| || ||| |    
T  1 ataatcgtttgttagtgatattaggttaacatgcttaaa-ctttcaaagattatttgaccacctaagaaattaggggttgtagtttgagaatagggtcct 99  T
Q  122 aagtcaaggg 131  Q
    ||||||||||    
T  100 aagtcaaggg 109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 13793 - 13838
Alignment:
Q  264 ttattttatgttatttacttttta-tgcacacaaacctactgcctc 308  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  13793 ttattttctgttatttactttttattgcacacaaacctactgcctc 13838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 20243 - 20288
Alignment:
Q  264 ttattttatgttatttacttttta-tgcacacaaacctactgcctc 308  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  20243 ttattttctgttatttactttttattgcacacaaacctactgcctc 20288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 27809 - 27854
Alignment:
Q  264 ttattttatgttatttacttttta-tgcacacaaacctactgcctc 308  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  27809 ttattttctgttatttactttttattgcacacaaacctactgcctc 27854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 14163 - 14248
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| |||||| ||| | | |  ||||||||||||||| |||||||||    
T  14163 tctaggaatggataatcctttattagtgatattaggttaacgtgcttaaacctt-cgacggttattagatcacctaaggaattaggg 14248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 31018 - 31103
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattaggg 97  Q
    ||||||| || |||||| ||  || |||||||||||||||||| ||| |||| |||||||  ||||||| ||||||| |||||||||    
T  31018 tctaggaatgtataatcctttattagtgatattaggttaacgtgctt-aaaccttcaaaggttattagaccacctaaggaattaggg 31103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1785 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 1173 - 1264
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaatgaattagggactata 103  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| ||| |||  ||||| | ||||||| ||||||||| |||||    
T  1173 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcgaaggttattataccacctaaggaattaggggctata 1264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 2271 - 2196
Alignment:
Q  11 tctaggattggataatcgttattttgtgatattaggttaacgttcttaaaactttcaaagaatattagatcacctaa 87  Q
    ||||||| ||||||||| ||  || |||||||||||||||||| ||| |||| ||| |||| ||||||| |||||||    
T  2271 tctaggaatggataatcctttattagtgatattaggttaacgtgctt-aaaccttcgaagattattagaccacctaa 2196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 3030 - 2966
Alignment:
Q  182 aataggtgcagtgtaccaattaggggaactcagaggatttgaaagatctagtctaatctctctct 246  Q
    |||||||||||| ||||||||||||||||  ||| |||| |||||| |||  || ||||||||||    
T  3030 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 2966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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