View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3707_high_19 (Length: 253)
Name: NF3707_high_19
Description: NF3707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3707_high_19 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 29485748 - 29485992
Alignment:
| Q |
1 |
ttttagtttaggtatagaaaataccatgttactgatcattgtaccaataaaatatgctggaaaaagaaaaagaatgaagattaacagtgtaactgaatcc |
100 |
Q |
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| T |
29485748 |
ttttagtttaggtatagaaaataccatgttattgatcattgtaccaataaaatatgctggaaaaagaagaagaatgaagattaacagtgtaactgaatcc |
29485847 |
T |
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| Q |
101 |
aaatatgaatccaagccagacaaataatcttctactattagacaaaatttatttattaatcttcaccaactcccaaaacaaaaaattaatacaagctcaa |
200 |
Q |
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| T |
29485848 |
aaatatgaatccaagccagacaaataatcttctactattagacaaaatttatttattaatcttcaccaactcccaaaacaaaaaattaatacaagctcaa |
29485947 |
T |
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| Q |
201 |
agcttaatggaccgaaattgaagctcccatgctgaatgatgatgt |
245 |
Q |
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| T |
29485948 |
agcttaatggaccgaaattgaagctcccatgctgactgatgatgt |
29485992 |
T |
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