View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3709_high_7 (Length: 367)

Name: NF3709_high_7
Description: NF3709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3709_high_7
NF3709_high_7
[»] scaffold0716 (1 HSPs)
scaffold0716 (18-255)||(4393-4630)
[»] chr4 (30 HSPs)
chr4 (18-255)||(3514715-3514943)
chr4 (18-156)||(15869100-15869238)
chr4 (99-255)||(14718297-14718459)
chr4 (136-255)||(12033505-12033624)
chr4 (99-255)||(1837840-1837996)
chr4 (99-255)||(18239750-18239912)
chr4 (99-255)||(50222670-50222832)
chr4 (113-255)||(15118697-15118845)
chr4 (18-156)||(32850970-32851113)
chr4 (18-132)||(6190293-6190407)
chr4 (113-255)||(44614957-44615106)
chr4 (18-111)||(21815805-21815898)
chr4 (29-132)||(21815865-21815968)
chr4 (177-255)||(29267332-29267410)
chr4 (41-134)||(361909-362002)
chr4 (41-134)||(19857236-19857329)
chr4 (99-215)||(44773418-44773533)
chr4 (136-220)||(15355671-15355756)
chr4 (41-132)||(13844259-13844350)
chr4 (41-132)||(15099005-15099096)
chr4 (113-207)||(7641527-7641619)
chr4 (133-181)||(15608177-15608226)
chr4 (133-182)||(15098935-15098985)
chr4 (136-181)||(15791426-15791472)
chr4 (133-182)||(19736378-19736428)
chr4 (136-180)||(26045627-26045672)
chr4 (136-180)||(26050808-26050853)
chr4 (133-181)||(32467334-32467383)
chr4 (133-176)||(20411-20455)
chr4 (41-81)||(46642598-46642638)
[»] scaffold0075 (2 HSPs)
scaffold0075 (18-156)||(8686-8824)
scaffold0075 (133-176)||(60110-60154)
[»] scaffold0192 (2 HSPs)
scaffold0192 (30-156)||(9677-9803)
scaffold0192 (29-61)||(9723-9755)
[»] chr7 (37 HSPs)
chr7 (99-255)||(32125168-32125322)
chr7 (99-255)||(41522594-41522748)
chr7 (99-255)||(41525056-41525210)
chr7 (113-255)||(26356303-26356443)
chr7 (113-255)||(26358755-26358895)
chr7 (113-255)||(16409737-16409877)
chr7 (114-255)||(455999-456138)
chr7 (99-255)||(11972165-11972327)
chr7 (99-255)||(21189926-21190088)
chr7 (136-255)||(11393641-11393760)
chr7 (113-255)||(15377058-15377206)
chr7 (113-255)||(20385467-20385615)
chr7 (99-255)||(16232189-16232351)
chr7 (113-255)||(14949466-14949614)
chr7 (113-255)||(24701924-24702056)
chr7 (113-255)||(24704374-24704506)
chr7 (69-156)||(1543467-1543554)
chr7 (41-134)||(9390070-9390163)
chr7 (104-215)||(18639988-18640098)
chr7 (18-102)||(12756891-12756975)
chr7 (41-132)||(6170476-6170567)
chr7 (113-253)||(27216546-27216678)
chr7 (41-134)||(17232283-17232376)
chr7 (113-207)||(18423415-18423507)
chr7 (41-134)||(45847997-45848090)
chr7 (136-215)||(10064144-10064224)
chr7 (41-132)||(37727911-37728002)
chr7 (68-134)||(14270435-14270501)
chr7 (29-62)||(1543476-1543509)
chr7 (133-182)||(9390181-9390231)
chr7 (133-182)||(17071368-17071418)
chr7 (78-111)||(12756902-12756935)
chr7 (136-180)||(38519114-38519159)
chr7 (136-180)||(42461691-42461736)
chr7 (90-134)||(8468147-8468191)
chr7 (133-176)||(17130862-17130906)
chr7 (133-180)||(47094014-47094062)
[»] chr1 (21 HSPs)
chr1 (99-255)||(23594066-23594220)
chr1 (113-255)||(13988579-13988727)
chr1 (113-255)||(21923636-21923784)
chr1 (113-255)||(21475432-21475572)
chr1 (136-255)||(41372783-41372902)
chr1 (41-134)||(41305961-41306054)
chr1 (41-132)||(28194823-28194914)
chr1 (41-134)||(35982053-35982146)
chr1 (41-132)||(20636561-20636652)
chr1 (41-132)||(43542774-43542865)
chr1 (41-134)||(46382929-46383022)
chr1 (41-132)||(43697030-43697121)
chr1 (46-81)||(35088503-35088538)
chr1 (136-181)||(21043615-21043661)
chr1 (133-182)||(35982164-35982214)
chr1 (136-180)||(20316157-20316202)
chr1 (46-79)||(20634605-20634638)
chr1 (136-180)||(22118555-22118600)
chr1 (136-180)||(23967498-23967543)
chr1 (136-180)||(48520035-48520080)
chr1 (133-176)||(45754346-45754390)
[»] chr6 (32 HSPs)
chr6 (113-255)||(1541255-1541395)
chr6 (113-255)||(12741995-12742135)
chr6 (113-255)||(26924984-26925132)
chr6 (99-255)||(2291511-2291673)
chr6 (99-255)||(8054698-8054860)
chr6 (99-255)||(18334923-18335085)
chr6 (99-255)||(19004715-19004877)
chr6 (99-255)||(24422216-24422378)
chr6 (99-255)||(33863947-33864109)
chr6 (113-255)||(22781941-22782089)
chr6 (113-255)||(33861464-33861612)
chr6 (35-132)||(18456536-18456633)
chr6 (35-132)||(18461696-18461793)
chr6 (136-255)||(25591122-25591249)
chr6 (136-255)||(25688245-25688356)
chr6 (29-132)||(18822081-18822184)
chr6 (41-132)||(25956995-25957086)
chr6 (18-108)||(18822021-18822111)
chr6 (136-220)||(19859285-19859370)
chr6 (41-134)||(27850831-27850924)
chr6 (136-199)||(25714168-25714231)
chr6 (136-199)||(25656504-25656567)
chr6 (198-255)||(25656472-25656529)
chr6 (63-134)||(18319549-18319620)
chr6 (198-255)||(25714136-25714193)
chr6 (133-180)||(20136414-20136462)
chr6 (133-180)||(22196407-22196455)
chr6 (133-182)||(22377012-22377062)
chr6 (133-182)||(15895672-15895721)
chr6 (136-180)||(17229987-17230032)
chr6 (136-180)||(17742938-17742983)
chr6 (135-182)||(18260294-18260342)
[»] chr3 (33 HSPs)
chr3 (112-255)||(55500620-55500761)
chr3 (113-255)||(16454625-16454765)
chr3 (18-132)||(53070873-53070987)
chr3 (99-255)||(9707937-9708099)
chr3 (99-255)||(34158995-34159157)
chr3 (113-255)||(17462847-17462995)
chr3 (18-156)||(23413638-23413781)
chr3 (99-255)||(45607238-45607384)
chr3 (18-156)||(45796756-45796899)
chr3 (113-255)||(7781653-7781801)
chr3 (99-252)||(13152122-13152265)
chr3 (99-252)||(13154587-13154730)
chr3 (113-255)||(10248067-10248199)
chr3 (136-255)||(55476191-55476302)
chr3 (46-134)||(20630468-20630556)
chr3 (172-254)||(29173024-29173107)
chr3 (99-208)||(15977236-15977343)
chr3 (136-215)||(21618184-21618264)
chr3 (113-203)||(6469475-6469563)
chr3 (136-203)||(28848976-28849043)
chr3 (113-206)||(45578183-45578275)
chr3 (50-132)||(49390053-49390135)
chr3 (46-134)||(14497129-14497217)
chr3 (136-215)||(36166290-36166370)
chr3 (41-132)||(1465784-1465875)
chr3 (52-132)||(18440232-18440312)
chr3 (52-132)||(19485306-19485386)
chr3 (136-172)||(29172972-29173008)
chr3 (136-189)||(15206669-15206723)
chr3 (133-182)||(46751832-46751882)
chr3 (136-180)||(9577448-9577493)
chr3 (133-176)||(8492600-8492644)
chr3 (41-81)||(12269285-12269325)
[»] chr5 (20 HSPs)
chr5 (113-255)||(10733284-10733424)
chr5 (113-255)||(29348131-29348271)
chr5 (113-255)||(29350604-29350744)
chr5 (113-255)||(42245709-42245849)
chr5 (113-255)||(29345650-29345798)
chr5 (99-252)||(265099-265258)
chr5 (113-255)||(20908681-20908829)
chr5 (136-255)||(39363084-39363195)
chr5 (191-255)||(2155041-2155105)
chr5 (136-255)||(31143957-31144070)
chr5 (41-132)||(5889533-5889624)
chr5 (113-202)||(39244866-39244953)
chr5 (41-132)||(21741915-21742006)
chr5 (136-172)||(2155002-2155038)
chr5 (136-182)||(26733122-26733169)
chr5 (136-172)||(23202863-23202899)
chr5 (133-176)||(25251013-25251057)
chr5 (133-176)||(25314798-25314842)
chr5 (135-182)||(25742732-25742780)
chr5 (88-132)||(29915437-29915481)
[»] chr2 (26 HSPs)
chr2 (113-255)||(571074-571214)
chr2 (136-255)||(34402873-34402992)
chr2 (99-255)||(18808612-18808774)
chr2 (113-255)||(23709877-23710025)
chr2 (113-255)||(24905977-24906125)
chr2 (113-255)||(24908452-24908600)
chr2 (113-255)||(24901023-24901171)
chr2 (113-255)||(24903500-24903648)
chr2 (113-253)||(26507529-26507675)
chr2 (113-250)||(23135265-23135408)
chr2 (99-255)||(32039829-32039983)
chr2 (113-244)||(26505060-26505197)
chr2 (113-255)||(39681983-39682131)
chr2 (95-220)||(45030181-45030305)
chr2 (113-255)||(24898540-24898696)
chr2 (18-132)||(32452105-32452219)
chr2 (177-255)||(23130547-23130625)
chr2 (177-255)||(23133014-23133092)
chr2 (191-255)||(24529958-24530022)
chr2 (99-189)||(28576842-28576930)
chr2 (136-172)||(24529919-24529955)
chr2 (153-189)||(26392158-26392194)
chr2 (136-180)||(18547279-18547324)
chr2 (136-180)||(34136682-34136727)
chr2 (136-180)||(43947661-43947706)
chr2 (46-86)||(7672478-7672518)
[»] scaffold0145 (1 HSPs)
scaffold0145 (99-255)||(9418-9580)
[»] scaffold0254 (1 HSPs)
scaffold0254 (99-255)||(20416-20578)
[»] scaffold0023 (1 HSPs)
scaffold0023 (99-255)||(94080-94242)
[»] chr8 (30 HSPs)
chr8 (99-255)||(1484071-1484233)
chr8 (99-255)||(20402896-20403058)
chr8 (113-255)||(4542717-4542865)
chr8 (113-255)||(5853636-5853784)
chr8 (113-255)||(14823444-14823592)
chr8 (99-252)||(22001426-22001585)
chr8 (18-132)||(19801601-19801715)
chr8 (136-255)||(4482981-4483092)
chr8 (136-220)||(26225637-26225722)
chr8 (177-255)||(18678439-18678517)
chr8 (177-255)||(18717628-18717706)
chr8 (99-215)||(20046482-20046597)
chr8 (136-212)||(26219456-26219533)
chr8 (41-134)||(38550365-38550458)
chr8 (49-132)||(39833641-39833724)
chr8 (41-134)||(27472662-27472755)
chr8 (41-134)||(13428416-13428509)
chr8 (50-134)||(20983008-20983092)
chr8 (46-134)||(1323454-1323544)
chr8 (137-180)||(37515269-37515313)
chr8 (136-182)||(22253497-22253544)
chr8 (46-81)||(24713207-24713242)
chr8 (136-182)||(28397290-28397337)
chr8 (133-182)||(13665582-13665632)
chr8 (133-182)||(13724857-13724907)
chr8 (140-189)||(20533746-20533796)
chr8 (136-180)||(18833178-18833223)
chr8 (133-181)||(19698950-19698999)
chr8 (136-180)||(20502434-20502479)
chr8 (136-180)||(22963745-22963790)
[»] scaffold0230 (3 HSPs)
scaffold0230 (136-255)||(13624-13743)
scaffold0230 (41-134)||(20827-20920)
scaffold0230 (49-134)||(23765-23850)
[»] scaffold0444 (1 HSPs)
scaffold0444 (113-255)||(13061-13209)
[»] scaffold0134 (1 HSPs)
scaffold0134 (113-255)||(37491-37639)
[»] scaffold0044 (1 HSPs)
scaffold0044 (113-255)||(40070-40218)
[»] scaffold0028 (5 HSPs)
scaffold0028 (113-255)||(136350-136498)
scaffold0028 (113-255)||(138819-138967)
scaffold0028 (113-255)||(143757-143905)
scaffold0028 (113-255)||(133881-134029)
scaffold0028 (113-255)||(141288-141436)
[»] scaffold0235 (2 HSPs)
scaffold0235 (18-156)||(13151-13294)
scaffold0235 (18-156)||(24853-24995)
[»] scaffold0098 (1 HSPs)
scaffold0098 (18-156)||(34738-34881)
[»] scaffold0503 (1 HSPs)
scaffold0503 (18-132)||(11794-11908)
[»] scaffold0056 (1 HSPs)
scaffold0056 (18-132)||(79504-79618)
[»] scaffold0034 (1 HSPs)
scaffold0034 (18-132)||(52059-52173)
[»] scaffold0003 (2 HSPs)
scaffold0003 (136-255)||(158797-158924)
scaffold0003 (46-86)||(95312-95352)
[»] scaffold0029 (1 HSPs)
scaffold0029 (18-134)||(74467-74583)
[»] scaffold0116 (1 HSPs)
scaffold0116 (41-134)||(44158-44251)
[»] scaffold0031 (2 HSPs)
scaffold0031 (18-111)||(20598-20691)
scaffold0031 (29-132)||(20658-20761)
[»] scaffold0045 (1 HSPs)
scaffold0045 (41-132)||(47049-47140)
[»] scaffold0035 (1 HSPs)
scaffold0035 (52-134)||(106219-106301)
[»] scaffold1792 (1 HSPs)
scaffold1792 (49-134)||(50-135)
[»] scaffold0022 (1 HSPs)
scaffold0022 (136-215)||(116154-116234)
[»] scaffold0810 (1 HSPs)
scaffold0810 (41-132)||(2701-2792)
[»] scaffold0042 (1 HSPs)
scaffold0042 (133-182)||(28161-28211)
[»] scaffold1351 (1 HSPs)
scaffold1351 (46-81)||(1402-1437)
[»] scaffold0117 (1 HSPs)
scaffold0117 (46-81)||(41220-41255)
[»] scaffold0040 (1 HSPs)
scaffold0040 (136-182)||(10879-10926)
[»] scaffold0001 (2 HSPs)
scaffold0001 (46-81)||(76737-76772)
scaffold0001 (136-180)||(497205-497250)
[»] scaffold0853 (1 HSPs)
scaffold0853 (136-180)||(2997-3042)
[»] scaffold0485 (1 HSPs)
scaffold0485 (136-180)||(9914-9959)
[»] scaffold0396 (1 HSPs)
scaffold0396 (136-180)||(1636-1681)
[»] scaffold0347 (1 HSPs)
scaffold0347 (136-180)||(8632-8677)
[»] scaffold0293 (1 HSPs)
scaffold0293 (136-180)||(17246-17291)
[»] scaffold0011 (1 HSPs)
scaffold0011 (136-180)||(38448-38493)
[»] scaffold0010 (1 HSPs)
scaffold0010 (136-180)||(6757-6802)
[»] scaffold0379 (1 HSPs)
scaffold0379 (133-176)||(14911-14955)


Alignment Details
Target: scaffold0716 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 18 - 255
Target Start/End: Complemental strand, 4630 - 4393
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4630 cattgcatactcataatacgagatgggagagggcttgatgctctgtaatgtatatttatacataatacgagatgggagagggcttaatgctctgagagcc 4531  T
Q  118 tatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgtta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4530 tatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgtta 4431  T
Q  218 agtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||||||| |||||||||||||||||    
T  4430 agtagttaaatcatgaaattttttaaagttgtgattct 4393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 255
Target Start/End: Complemental strand, 3514943 - 3514715
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  3514943 cattgcatactcataatacgagatgggagagggcttgatgatctgtaatgtatatttatacataatacgagatgggagagggcttgatgcactgagagcc 3514844  T
Q  118 tatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgtta 217  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||        |||||||||||||||||||    
T  3514843 tatttacgctcaatatggttggtaccacatgcatga-tagaagattaagttgcatagtcaagttgtcaagtta--------tcaagttgtcgagttgtta 3514753  T
Q  218 agtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3514752 agtagttaaatcatgaaattgtttaaagttgtgattct 3514715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 15869100 - 15869238
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| | ||||||    
T  15869100 cattgcatactcataatacgtgatgggggagggcttgatgctctgtaatgtatatttatacataatacgagatgggagagggcttgatgctataagagcc 15869199  T
Q  118 tatttacgctcaatatggttggtaccacatgcatgatta 156  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  15869200 tatttacgctcaatatgattggtaccacatgcatgatta 15869238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 99 - 255
Target Start/End: Original strand, 14718297 - 14718459
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  14718297 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 14718394  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14718395 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagttgtgattct 14718459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 136 - 255
Target Start/End: Original strand, 12033505 - 12033624
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaa 235  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||| |||||||||||||||||||||| ||||||||||||||    
T  12033505 ttggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaa 12033604  T
Q  236 ttgtttaaagttgtgattct 255  Q
    |||||||||| |||||||||    
T  12033605 ttgtttaaagctgtgattct 12033624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Original strand, 1837840 - 1837996
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagtt--gtcaagttatcaagt 196  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||    || ||||| ||||||    
T  1837840 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagagaggttaagttgtcaagt 1837937  T
Q  197 tgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||    
T  1837938 tgtcaagttgtcgagttggtaagttgttaaatcatgaaattgtttaaagctgtgattct 1837996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Original strand, 18239750 - 18239912
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  18239750 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 18239847  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  18239848 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 18239912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Original strand, 50222670 - 50222832
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  50222670 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 50222767  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  50222768 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 50222832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 15118697 - 15118845
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  15118697 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 15118794  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  15118795 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 15118845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 32851113 - 32850970
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    ||||||||| |||||||| |||||||| |||||||||||||||| ||||||||||||||||| |||  |||||||||||| |||| |||||||| |||||    
T  32851113 cattgcatattcataatatgagatgggggagggcttgatgctctgtaatgtatatttatacacaatctgagatgggagagggcttgatgctctgggagcc 32851014  T
Q  118 tatttacgctcaata-----tggttggtaccacatgcatgatta 156  Q
    |||||||||||||||     || |||||||||||||||||||||    
T  32851013 tatttacgctcaatatgatttgattggtaccacatgcatgatta 32850970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 6190407 - 6190293
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    |||||||||| ||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||  ||||| |||| |||| ||||||||||||||    
T  6190407 cattgcatacgcataatacgagatggtagagagcttgatgctctgtaatgtatatttatacataatacacgatggtagagggcttgatgctctgagagcc 6190308  T
Q  118 tatttacgctcaata 132  Q
    |||||||||||||||    
T  6190307 tatttacgctcaata 6190293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 44615106 - 44614957
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattg---------tcaagttgtcaagttatcaagttgtcaag 203  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| |         | ||||||||||||| ||||||| |||||    
T  44615106 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcataggtcaagaggttaagttgtcaagttgtcaagttatcaag 44615009  T
Q  204 ttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  44615008 ttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 44614957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 21815805 - 21815898
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctg 111  Q
    |||| ||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  21815805 cattacatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataacacgagatgggagagagcttgatgctctg 21815898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 21815865 - 21815968
Alignment:
Q  29 cataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctc 128  Q
    ||||| |||||||||||||| |||||||||||| |||||||||||||||||||| ||  |||||||||| |||| ||||| |||||||||||||||||||    
T  21815865 cataacacgagatgggagagagcttgatgctctgtaatgtatatttatacataacacacgatgggagagggcttgatgctatgagagcctatttacgctc 21815964  T
Q  129 aata 132  Q
    ||||    
T  21815965 aata 21815968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 29267410 - 29267332
Alignment:
Q  177 aagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  29267410 aagttgtcaagttgtcaagttatcaagttgtcgagttgttaagtagttaaatcatgaaattgcttaaagctgtgattct 29267332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 362002 - 361909
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | || |||||||||||| |||||||| |||||||||||| |||||||||    
T  362002 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagagcttgatgctctgtgagcctatttacactcaatatg 361909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 19857329 - 19857236
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | || ||||||| |||| |||||||| ||||||||||||||||||||||    
T  19857329 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatatg 19857236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 44773418 - 44773533
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttg 198  Q
    |||| |||| ||| ||||||||||||||||||   | |||||||||||||| |||||||||||||||||||||| |||||||||||||||| || |||||    
T  44773418 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcttgattagaagattaagttgcatagtcaagttgtcaagttgtcgagttg 44773515  T
Q  199 tcaag-ttgtcgagttgt 215  Q
    ||||| ||||| ||||||    
T  44773516 tcaagattgtcaagttgt 44773533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 15355671 - 15355756
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaag-ttgtcaagttgtcgagttgttaagt 220  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||| ||||||| ||||||||||| |||||    
T  15355671 ttggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcgagttgtcaagattgtcaaattgtcgagttgataagt 15355756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 13844350 - 13844259
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | || |||||||  ||| |||||||| ||||||||||| ||||||||    
T  13844350 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagaggacttgatgctctgtgagcctatttaagctcaata 13844259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 15099096 - 15099005
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | || ||| ||| | || |||||||| ||||||||||||||||||||    
T  15099096 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggggagggtttgatgctctgtgagcctatttacgctcaata 15099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 7641527 - 7641619
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgt 207  Q
    ||||||||||||||||||   | |||||||||||||||   ||||||||||||||||||| |||||||||||||||| || |||||  |||||||    
T  7641527 gagcctatttacgctcaaa--gattggtaccacatgcaatgttagaagattaagttgcatagtcaagttgtcaagttgtcgagttgataagttgt 7641619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 15608226 - 15608177
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagtt 181  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  15608226 tggttggtaccacatgcatgattaagaagatgaagttgcattgtcgagtt 15608177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 15098985 - 15098935
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    ||||||||||||||||||||||| ||||| | ||||||||| |||||||||    
T  15098985 tggttggtaccacatgcatgattaagaagttgaagttgcatagtcaagttg 15098935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 15791472 - 15791426
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagtt 181  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  15791472 ttggtaccacatgcatgattaagaggattaagttgcatagtcaagtt 15791426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 19736428 - 19736378
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    ||||||||||||||||||||||| |||||||  |||||||| |||||||||    
T  19736428 tggttggtaccacatgcatgattaagaagatgtagttgcatagtcaagttg 19736378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 26045627 - 26045672
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||    
T  26045627 ttggtaccacatgcatgattaagaagaataagttgcatagtcaagt 26045672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 26050808 - 26050853
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||    
T  26050808 ttggtaccacatgcatgattaagaagaataagttgcatagtcaagt 26050853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 32467334 - 32467383
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagtt 181  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||| ||||    
T  32467334 tggttggtaccacatgcatgattaagaagttgaagttgcattgtcgagtt 32467383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 20455 - 20411
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtc 176  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||    
T  20455 tggttggtaccacatgcatgattaagaagttgaagttgcattgtc 20411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 46642638 - 46642598
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacata 81  Q
    |||| ||||| |||||||||| |||||||||||||||||||    
T  46642638 tgggtgagggtttgatgctctgtaatgtatatttatacata 46642598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 111; Significance: 6e-56; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 8686 - 8824
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||||| |||||    
T  8686 cattgcatactcataatacgagatgggggagggcttgatgctctgtaatgtatatttatacacaatatgagatgggagagagcttgatgctctgggagcc 8785  T
Q  118 tatttacgctcaatatggttggtaccacatgcatgatta 156  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  8786 tatttacgctcaatatgattggtaccacatgcatgatta 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 60154 - 60110
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtc 176  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||    
T  60154 tggttggtaccacatgcatgattaagaagttgaagttgcattgtc 60110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 9803 - 9677
Alignment:
Q  30 ataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctca 129  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  9803 ataatacgtgatgggagagggcttgatgctctgtaatgaatatttatacataatacgagatgggagagggcttgatgctctgagagcctatttacgctca 9704  T
Q  130 atatggttggtaccacatgcatgatta 156  Q
    ||||| |||||||||||||||||||||    
T  9703 atatgattggtaccacatgcatgatta 9677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 9755 - 9723
Alignment:
Q  29 cataatacgagatgggagagggcttgatgctct 61  Q
    |||||||||||||||||||||||||||||||||    
T  9755 cataatacgagatgggagagggcttgatgctct 9723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 3e-48; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 32125322 - 32125168
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttg 198  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||||    
T  32125322 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 32125225  T
Q  199 tcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  32125224 tcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 32125168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 41522748 - 41522594
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttg 198  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| |||||||     
T  41522748 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagtta 41522651  T
Q  199 tcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  41522650 tcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 41522594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 41525210 - 41525056
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttg 198  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| |||||||     
T  41525210 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagtta 41525113  T
Q  199 tcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  41525112 tcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 41525056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 26356303 - 26356443
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||| ||||||||||||||    
T  26356303 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttatcaagttgtcgagt 26356400  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  26356401 tgttaagttgttaaatcatgaaattgtttaaagctgtgattct 26356443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 26358755 - 26358895
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||| ||||||||||||||    
T  26358755 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttatcaagttgtcgagt 26358852  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  26358853 tgttaagttgttaaatcatgaaattgtttaaagctgtgattct 26358895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 16409877 - 16409737
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||| || |||||||||||    
T  16409877 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttatcgagttgtcgagt 16409780  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  16409779 tgttaagttgttaaatcatgaaattgtttaaagctgtgattct 16409737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 114 - 255
Target Start/End: Complemental strand, 456138 - 455999
Alignment:
Q  114 agcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagtt 213  Q
    |||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||||||||||| || ||||    
T  456138 agcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagtt 456041  T
Q  214 gttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  456040 gttaagttgttaaatcatgaaattgtttaaagctgtgattct 455999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 11972327 - 11972165
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  11972327 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 11972230  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  11972229 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 11972165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Original strand, 21189926 - 21190088
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  21189926 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 21190023  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  21190024 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 21190088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 136 - 255
Target Start/End: Original strand, 11393641 - 11393760
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaa 235  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  11393641 ttggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttgtcaagttgttaagttgttaaatcatgaaa 11393740  T
Q  236 ttgtttaaagttgtgattct 255  Q
    |||||||||| | |||||||    
T  11393741 ttgtttaaagctatgattct 11393760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 15377058 - 15377206
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  15377058 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 15377155  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  15377156 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 15377206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 20385467 - 20385615
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  20385467 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 20385564  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  20385565 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 20385615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 16232351 - 16232189
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||| ||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  16232351 gcttgatgccctgggagcctatttacgcttaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 16232254  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  16232253 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 16232189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 14949466 - 14949614
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  14949466 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 14949563  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| | |||||||    
T  14949564 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctatgattct 14949614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 24702056 - 24701924
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||     | ||||   |||||||||||||||||||    
T  24702056 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaag-----aggtta---agttgtcaagttgtcgagt 24701967  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  24701966 tgttaagttgttaaatcatgaaattgtttaaagctgtgattct 24701924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 24704506 - 24704374
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||     | ||||   |||||||||||||||||||    
T  24704506 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaag-----aggtta---agttgtcaagttgtcgagt 24704417  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  24704416 tgttaagttgttaaatcatgaaattgtttaaagctgtgattct 24704374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 1543467 - 1543554
Alignment:
Q  69 atatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgatta 156  Q
    ||||||||||||||||||||||||||||| |||| |||||||  |||||||||||||||||||||| |||||||||||||||||||||    
T  1543467 atatttatacataatacgagatgggagagggcttgatgctctaggagcctatttacgctcaatatgattggtaccacatgcatgatta 1543554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 9390070 - 9390163
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | || ||||||| |||| |||||||| ||||||||||||||||||||||    
T  9390070 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatatg 9390163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 104 - 215
Target Start/End: Complemental strand, 18640098 - 18639988
Alignment:
Q  104 atgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaag 203  Q
    |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||    
T  18640098 atgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcaagttgtcgagttgtcaag 18640001  T
Q  204 -ttgtcgagttgt 215  Q
     ||||| ||||||    
T  18640000 attgtcaagttgt 18639988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 12756891 - 12756975
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagctt 102  Q
    |||||||||| |||||||||||||||||||| |||||||||||| || ||||||||||||||||||||| |||||||||| ||||    
T  12756891 cattgcatacgcataatacgagatgggagagagcttgatgctctgtattgtatatttatacataatacgcgatgggagagggctt 12756975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 6170476 - 6170567
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | || ||||||| |||| |||||||  ||||||||||||||||||||    
T  6170476 tgggtgagggcttgatgctctataatgtatatttatacataatatgtgaagggagagggcttgatgctctatgagcctatttacgctcaata 6170567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 113 - 253
Target Start/End: Complemental strand, 27216678 - 27216546
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||      ||   | ||||||||||||| || |||    
T  27216678 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaag------agaggttaagttgtcaagttatcaagt 27216587  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgatt 253  Q
    ||| |||| |||||||||||||||||||||||| |||||||    
T  27216586 tgtcaagttgttaaatcatgaaattgtttaaagctgtgatt 27216546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 17232376 - 17232283
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| |||||||||||||| | |||||||||||||||||||||| | || ||||||| |||| |||||||| ||||||||||||||||||||||    
T  17232376 tgggtgagggcttgatgctatgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatatg 17232283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 18423507 - 18423415
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgt 207  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||  |||||||    
T  18423507 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcaagttgtcgagttgataagttgt 18423415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 45847997 - 45848090
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | || ||  ||| |||| |||||||| ||||||||||||||||||||||    
T  45847997 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaaggttgagggcttgatgctctgtgagcctatttacgctcaatatg 45848090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 10064144 - 10064224
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaag-ttgtcgagttgt 215  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||||||||| ||||| ||||||    
T  10064144 ttggtaccacatgcatgattagaggattaagttgcatagtcaagttctcaagttatcgagttgtcaagattgtcaagttgt 10064224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 37727911 - 37728002
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| ||| |||||||||||| |||||||||||||||||||||| | || ||||||| | || |||||||  ||||||||||||||||||||    
T  37727911 tgggtgagagcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggtttgatgctctttgagcctatttacgctcaata 37728002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 14270435 - 14270501
Alignment:
Q  68 tatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    ||||||||||||||||| | || ||||||| |||| |||||||| ||||||||||||||||||||||    
T  14270435 tatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatatg 14270501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 1543476 - 1543509
Alignment:
Q  29 cataatacgagatgggagagggcttgatgctcta 62  Q
    ||||||||||||||||||||||||||||||||||    
T  1543476 cataatacgagatgggagagggcttgatgctcta 1543509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 9390181 - 9390231
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    ||||||||||||||||||||||| ||||| | ||||||||| |||||||||    
T  9390181 tggttggtaccacatgcatgattaagaagttgaagttgcatagtcaagttg 9390231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 17071368 - 17071418
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    ||||||||||||||||||||||| |||||||  |||||||||||| |||||    
T  17071368 tggttggtaccacatgcatgattaagaagatgtagttgcattgtcgagttg 17071418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 111
Target Start/End: Original strand, 12756902 - 12756935
Alignment:
Q  78 cataatacgagatgggagagagcttaatgctctg 111  Q
    ||||||||||||||||||||||||| ||||||||    
T  12756902 cataatacgagatgggagagagcttgatgctctg 12756935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 38519159 - 38519114
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||    
T  38519159 ttggtaccacatgcatgattaagaagaataagttgcatagtcaagt 38519114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 42461736 - 42461691
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  42461736 ttggtaccacatgcatgattaagaagataaagttgcatagtcaagt 42461691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 8468191 - 8468147
Alignment:
Q  90 tgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| ||| |||| |||||||| ||||||||||||||||||||||    
T  8468191 tgggtgagggcttgatgctctgtgagcctatttacgctcaatatg 8468147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 17130862 - 17130906
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtc 176  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||    
T  17130862 tggttggtaccacatgcatgattaagaagttgaagttgcattgtc 17130906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 47094062 - 47094014
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    ||||||||||||||||||||||| ||||| |  ||||||||||||||||    
T  47094062 tggttggtaccacatgcatgattaagaagttgtagttgcattgtcaagt 47094014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 3e-48; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 99 - 255
Target Start/End: Original strand, 23594066 - 23594220
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttg 198  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||||    
T  23594066 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 23594163  T
Q  199 tcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  23594164 tcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 23594220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 13988727 - 13988579
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  13988727 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 13988630  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  13988629 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 13988579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 21923636 - 21923784
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  21923636 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 21923733  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  21923734 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 21923784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 21475432 - 21475572
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||||||||||| || |||    
T  21475432 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 21475529  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||  ||| |||||||||||||||||||||||| |||||||||    
T  21475530 tgtcgagttgttaaatcatgaaattgtttaaagctgtgattct 21475572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 136 - 255
Target Start/End: Complemental strand, 41372902 - 41372783
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaa 235  Q
    ||||||||||||||||||||||||||||||||||||| |||||   || ||||| ||||||||||||||| || ||||||  ||| ||||||||||||||    
T  41372902 ttggtaccacatgcatgattagaagattaagttgcatagtcaataggttaagttgtcaagttgtcaagttatcaagttgtcgagttgttaaatcatgaaa 41372803  T
Q  236 ttgtttaaagttgtgattct 255  Q
    |||||||||| |||||||||    
T  41372802 ttgtttaaagctgtgattct 41372783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 41305961 - 41306054
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | || ||||||| |||| |||||||| ||||||||||||||||||||||    
T  41305961 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatatg 41306054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 28194823 - 28194914
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | || ||||||| |||| |||||||| ||||||||||||||||||||    
T  28194823 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaata 28194914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 35982053 - 35982146
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| |||||||||||||||| |||||| ||||||||||||||| | || ||||||| |||| |||||||| ||||||||||||||||||||||    
T  35982053 tgggtgagggcttgatgctctgtaatgtttatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatatg 35982146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 20636652 - 20636561
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| |||||||||||||||| |||||||||||||| ||||||| | || ||||||| |||| |||||||| ||||||||||| ||||||||    
T  20636652 tgggtgagggcttgatgctctgtaatgtatatttatccataatatgtgaagggagagggcttgatgctctgtgagcctatttatgctcaata 20636561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 43542865 - 43542774
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| ||| |||||||||||| |||||||||||||||||||||| | || ||||||| |||| |||||||| || |||||||||||||||||    
T  43542865 tgggtgagagcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctgtgaccctatttacgctcaata 43542774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 46382929 - 46383022
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| ||||| |||||||||| |||||||||||||||||||||| | || ||||||| | || |||||||| ||||||||||||| ||||||||    
T  46382929 tgggtgagggtttgatgctctgtaatgtatatttatacataatatgtgaagggagagggtttgatgctctgtgagcctatttacgttcaatatg 46383022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 43697121 - 43697030
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| ||||| |||||||||| |||||||||||||||||||||| | || ||||||| |||| |||||||  ||| ||||||||||||||||    
T  43697121 tgggtgagggtttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctatgagtctatttacgctcaata 43697030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 35088538 - 35088503
Alignment:
Q  46 gagggcttgatgctctataatgtatatttatacata 81  Q
    |||||||||||||||| |||||||||||||||||||    
T  35088538 gagggcttgatgctctgtaatgtatatttatacata 35088503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 21043615 - 21043661
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagtt 181  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  21043615 ttggtaccacatgcatgattaagaagataaagttgcatagtcaagtt 21043661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 35982164 - 35982214
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    ||||||||||||||||||||||| ||||| | ||||||||| |||||||||    
T  35982164 tggttggtaccacatgcatgattaagaagttgaagttgcatagtcaagttg 35982214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 20316202 - 20316157
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  20316202 ttggtaccacatgcatgattaagaagataaagttgcatagtcaagt 20316157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 20634605 - 20634638
Alignment:
Q  46 gagggcttgatgctctataatgtatatttataca 79  Q
    ||||||||||||| ||||||||||||||||||||    
T  20634605 gagggcttgatgccctataatgtatatttataca 20634638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 22118600 - 22118555
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  22118600 ttggtaccacatgcatgattaagaggattaagttgcatagtcaagt 22118555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 23967543 - 23967498
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  23967543 ttggtaccacatgcatgattaagaagataaagttgcatagtcaagt 23967498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 48520080 - 48520035
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  48520080 ttggtaccacatgcatgattaagaagataaagttgcatagtcaagt 48520035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 45754390 - 45754346
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtc 176  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||    
T  45754390 tggttggtaccacatgcatgattaagaagttgaagttgcattgtc 45754346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 5e-47; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 1541255 - 1541395
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||||||||||||||||||    
T  1541255 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttgtcgagt 1541352  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  1541353 tgttaagttgttaaatcatgaaattgtttaaagctgtgattct 1541395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 12742135 - 12741995
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||||||||||||||||||    
T  12742135 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttgtcgagt 12742038  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  12742037 tgttaagttgttaaatcatgaaattgtttaaagctgtgattct 12741995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 26924984 - 26925132
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  26924984 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 26925081  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26925082 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagttgtgattct 26925132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Original strand, 2291511 - 2291673
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  2291511 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 2291608  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  2291609 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 2291673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 8054860 - 8054698
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  8054860 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 8054763  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  8054762 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 8054698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Original strand, 18334923 - 18335085
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  18334923 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 18335020  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  18335021 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 18335085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 19004877 - 19004715
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  19004877 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 19004780  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  19004779 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 19004715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 24422378 - 24422216
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  24422378 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 24422281  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  24422280 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 24422216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 33864109 - 33863947
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  33864109 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 33864012  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  33864011 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 33863947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 22782089 - 22781941
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  22782089 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 22781992  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  22781991 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 22781941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 33861612 - 33861464
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  33861612 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 33861515  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  33861514 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 33861464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 18456633 - 18456536
Alignment:
Q  35 acgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||    
T  18456633 acgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatcctctgagagcctatttacgctcaata 18456536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 18461793 - 18461696
Alignment:
Q  35 acgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||    
T  18461793 acgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatcctctgagagcctatttacgctcaata 18461696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 136 - 255
Target Start/End: Original strand, 25591122 - 25591249
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaa 227  Q
    ||||||||||||||||||||||||||||||||||||| ||||||        ||||| |||| ||||||| |||| ||||||||||||||||| ||||||    
T  25591122 ttggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcgagttgtcaagttatcaaattgtcgagttgttaagttgttaaa 25591221  T
Q  228 tcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||||| |||||||||    
T  25591222 tcatgaaattgtttaaagctgtgattct 25591249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 136 - 255
Target Start/End: Complemental strand, 25688356 - 25688245
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaa 235  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||        || ||||||||||||||||||| ||||||||||||||    
T  25688356 ttggtaccacatgcatgattagaagattaagtggcatagtcaagttgtcaagtta--------tcgagttgtcgagttgttaagttgttaaatcatgaaa 25688265  T
Q  236 ttgtttaaagttgtgattct 255  Q
    |||||||||| |||||||||    
T  25688264 ttgtttaaagctgtgattct 25688245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 18822081 - 18822184
Alignment:
Q  29 cataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctc 128  Q
    ||||||| | ||||| |||| |||||||||| | |||||||||||||||||||||||| ||||| |||| |||| |||||||||||||||||||||||||    
T  18822081 cataatatgtgatggtagagagcttgatgctttgtaatgtatatttatacataatacgcgatggtagagggcttgatgctctgagagcctatttacgctc 18822180  T
Q  129 aata 132  Q
    ||||    
T  18822181 aata 18822184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 25956995 - 25957086
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | || ||||||| |||| |||||||| ||||||||||||||||||||    
T  25956995 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaata 25957086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 18822021 - 18822111
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgct 108  Q
    |||||||||| ||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| | ||||| ||||||||| |||||    
T  18822021 cattgcatacgcataatacgagatggtagagagcttgatgctctgtaatgtatatttatacataatatgtgatggtagagagcttgatgct 18822111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 19859285 - 19859370
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaag-ttgtcgagttgttaagt 220  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||| |||||| ||||    
T  19859285 ttggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcaagttgtcgagttgtcaagattgtcaagttgtcaagt 19859370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 27850924 - 27850831
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| ||||||||||||||||||||||||||||| |||||| |||| || ||||||| |||| |||||||  ||||||||||||||||||||||    
T  27850924 tgggtgagggcttgatgctctataatgtatatttgtacatagtacgtgaggggagagggcttgatgctctatgagcctatttacgctcaatatg 27850831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 25714231 - 25714168
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgt 199  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||    
T  25714231 ttggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcaagttgtcgagttgt 25714168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 25656567 - 25656504
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgt 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| | |||||||    
T  25656567 ttggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcgagttgttaagttgt 25656504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 25656529 - 25656472
Alignment:
Q  198 gtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||    
T  25656529 gtcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgttattct 25656472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 18319620 - 18319549
Alignment:
Q  63 taatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    ||||||||||||||||||||||||  | ||||||| |||| |||||||  ||||||||||||||||||||||    
T  18319620 taatgtatatttatacataatacgcaaagggagagggcttgatgctcttggagcctatttacgctcaatatg 18319549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 25714193 - 25714136
Alignment:
Q  198 gtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||||||| ||||||  ||| |||||||||||||||||||||||| |||||||||    
T  25714193 gtcaagttgtcaagttgtcgagttgttaaatcatgaaattgtttaaagctgtgattct 25714136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 20136462 - 20136414
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    ||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  20136462 tggttggtaccacatgcatgattaagaagatgaagttgcatagtcaagt 20136414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 22196407 - 22196455
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    ||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  22196407 tggttggtaccacatgcatgattaagaagatgaagttgcatagtcaagt 22196455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 22377012 - 22377062
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    ||||||||||||||||||||||| |||||||  |||||||||||| |||||    
T  22377012 tggttggtaccacatgcatgattaagaagatgtagttgcattgtcgagttg 22377062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 15895721 - 15895672
Alignment:
Q  133 tggttggtaccacatgcatgattagaagattaagttgcattgtcaagttg 182  Q
    |||||||||||||||| ||||| |||||||  |||||||||||| |||||    
T  15895721 tggttggtaccacatgtatgataagaagatgtagttgcattgtcgagttg 15895672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 17229987 - 17230032
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  17229987 ttggtaccacatgcatgattaagaagataaagttgcatagtcaagt 17230032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 17742983 - 17742938
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  17742983 ttggtaccacatgcatgattaagaagataaagttgcatagtcaagt 17742938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 18260294 - 18260342
Alignment:
Q  135 gttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    ||||||||||||||||||||| |||||||  |||| |||||||||||||    
T  18260294 gttggtaccacatgcatgattaagaagatgtagtttcattgtcaagttg 18260342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 3e-45; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 112 - 255
Target Start/End: Complemental strand, 55500761 - 55500620
Alignment:
Q  112 agagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgag 211  Q
    |||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||||||||||||| |||    
T  55500761 agagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaagttaagttgtcaagttgtcaagttgttgag 55500664  T
Q  212 ttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||||| |||||||||||||||||||||||| |||||||||    
T  55500663 ttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 55500620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 16454625 - 16454765
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||| ||||||||||||||    
T  16454625 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttatcaagttgtcgagt 16454722  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  16454723 tgttaagttgttaaatcatgaaattgtttaaagctgtgattct 16454765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 53070873 - 53070987
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  53070873 cattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatgctgtgagagcc 53070972  T
Q  118 tatttacgctcaata 132  Q
    |||||||||||||||    
T  53070973 tatttacgctcaata 53070987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Original strand, 9707937 - 9708099
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  9707937 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 9708034  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  9708035 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 9708099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 34159157 - 34158995
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  34159157 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 34159060  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  34159059 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 34158995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 17462995 - 17462847
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  17462995 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 17462898  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  17462897 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 17462847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 23413638 - 23413781
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    ||||||||| |||||||  |||||||| |||||||||||||||||||||||||||||||||| |||  |||||||||||| |||| |||||||  |||||    
T  23413638 cattgcatattcataatctgagatgggggagggcttgatgctctataatgtatatttatacacaatctgagatgggagagggcttgatgctctaggagcc 23413737  T
Q  118 tatttacgctcaata-----tggttggtaccacatgcatgatta 156  Q
    |||||||||||||||     || |||||||||||||||||||||    
T  23413738 tatttacgctcaatatgatttgattggtaccacatgcatgatta 23413781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 99 - 255
Target Start/End: Original strand, 45607238 - 45607384
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttg 198  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||     | |||   ||||||    
T  45607238 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaag-----aggtt---aagttg 45607327  T
Q  199 tcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  45607328 tcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 45607384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 45796899 - 45796756
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    ||||||||| |||||||  |||||||| |||||||||||||||| ||||||||||||||||| |||  |||||||||||| |||| |||||||| |||||    
T  45796899 cattgcatattcataatctgagatgggggagggcttgatgctctgtaatgtatatttatacacaatctgagatgggagagggcttgatgctctgggagcc 45796800  T
Q  118 tatttacgctcaata-----tggttggtaccacatgcatgatta 156  Q
    |||||||||||||||     || |||||||||||||||||||||    
T  45796799 tatttacgctcaatatgatttgattggtaccacatgcatgatta 45796756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 7781653 - 7781801
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||| ||||||||||||||||||| ||||||        |||||||||| || |||| ||||||    
T  7781653 gagcctatttacgctcaaa--gattggtaccacatgcatgtttagaagattaagttgcatagtcaagaggttaagttgtcaagttgtccagttatcaagt 7781750  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  7781751 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 7781801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 99 - 252
Target Start/End: Original strand, 13152122 - 13152265
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttg 198  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||     | |||   ||||||    
T  13152122 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaag-----aggtt---aagttg 13152211  T
Q  199 tcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgat 252  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  13152212 tcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgat 13152265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 99 - 252
Target Start/End: Original strand, 13154587 - 13154730
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttg 198  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||     | |||   ||||||    
T  13154587 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaag-----aggtt---aagttg 13154676  T
Q  199 tcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgat 252  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  13154677 tcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgat 13154730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 10248067 - 10248199
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||     | |||   ||||||||||||||||||||    
T  10248067 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaag-----aggtt---aagttgtcaagttgtcgagt 10248156  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| ||||||||||||||||||| |||| |||||||||    
T  10248157 tgttaagttgttaaatcatgaaattgttgaaagctgtgattct 10248199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 136 - 255
Target Start/End: Complemental strand, 55476302 - 55476191
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaa 235  Q
    ||||||||||||||||||||||||||||||||||||| ||||||     | ||||   ||||||||||||||||||||||||||| ||||||||||||||    
T  55476302 ttggtaccacatgcatgattagaagattaagttgcatagtcaag-----aggtta---agttgtcaagttgtcgagttgttaagttgttaaatcatgaaa 55476211  T
Q  236 ttgtttaaagttgtgattct 255  Q
    |||||||||| |||||||||    
T  55476210 ttgtttaaagctgtgattct 55476191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 20630468 - 20630556
Alignment:
Q  46 gagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||||||||||||||| |||||||||||||||||||||| | || ||||||| |||| |||||||| ||||||||||||||||||||||    
T  20630468 gagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatatg 20630556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 29173024 - 29173107
Alignment:
Q  172 ttgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgttaa-gtagttaaatcatgaaattgtttaaagttgtgattc 254  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||| ||||||||    
T  29173024 ttgtcgagttgtcaagttatcaagttgtcaagttgtcgagttgttaatgttgttaaattatgaaattgtttaaagctgtgattc 29173107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 208
Target Start/End: Complemental strand, 15977343 - 15977236
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttg 198  Q
    |||| |||| ||| ||||||||||| ||||||   | ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  15977343 gcttgatgccctgggagcctatttatgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcaagttgtcgagttg 15977246  T
Q  199 tcaagttgtc 208  Q
    || |||||||    
T  15977245 tcgagttgtc 15977236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 21618264 - 21618184
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaag-ttgtcgagttgt 215  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||| ||||||    
T  21618264 ttggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcaagttgtcgagttgtcaagattgtcaagttgt 21618184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 6469475 - 6469563
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaag 203  Q
    ||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||  ||||||||||||||| || ||||||||||    
T  6469475 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcataatcaagttgtcaagttgtcgagttgtcaag 6469563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 28848976 - 28849043
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaag 203  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||    
T  28848976 ttggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcaagttgtcgagttgtcaag 28849043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 45578183 - 45578275
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaag-ttatcaagttgtcaagttg 206  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||| |||||    
T  45578183 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcaagattgtcaagttgtcgagttg 45578275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 132
Target Start/End: Original strand, 49390053 - 49390135
Alignment:
Q  50 gcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||||||||||| |||||||||||||||||||||| | || || |||| |||| |||||||||||||||||||||||||||||    
T  49390053 gcttgatgctctgtaatgtatatttatacataatatgtgaaggtagagggcttgatgctctgagagcctatttacgctcaata 49390135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 14497217 - 14497129
Alignment:
Q  46 gagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    ||||||||||| |||| ||||||||||||||||| |||  ||||| |||||| |||| |||||||| ||||||||||||||||||||||    
T  14497217 gagggcttgatactctgtaatgtatatttatacacaatctgagataggagagggcttgatgctctgggagcctatttacgctcaatatg 14497129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 36166370 - 36166290
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaag-ttgtcgagttgt 215  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||  || |||||||||| ||||| ||||||    
T  36166370 ttggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcaagtcgtcgagttgtcaagattgtcaagttgt 36166290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 1465784 - 1465875
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| |||||||||||||||| ||||||||||||| |||||||| | || ||||||||| || |||||||| ||||||||||| ||||||||    
T  1465784 tgggtgagggcttgatgctctgtaatgtatatttaaacataatatgtgaagggagagagattgatgctctgtgagcctatttaagctcaata 1465875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 18440232 - 18440312
Alignment:
Q  52 ttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||||||||| |||||||||||||||||||||  | || ||||||| |||| |||||||| ||||||||||||||||||||    
T  18440232 ttgatgctctgtaatgtatatttatacataatttgtgaagggagagggcttgatgctctgtgagcctatttacgctcaata 18440312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 19485306 - 19485386
Alignment:
Q  52 ttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||||||||| |||||||||||||||||||||  | || ||||||| |||| |||||||| ||||||||||||||||||||    
T  19485306 ttgatgctctgtaatgtatatttatacataatttgtgaagggagagggcttgatgctctgtgagcctatttacgctcaata 19485386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 29172972 - 29173008
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcat 172  Q
    |||||||||||||||||||||||||||||||||||||    
T  29172972 ttggtaccacatgcatgattagaagattaagttgcat 29173008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 15206723 - 15206669
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttgtcaagtt 189  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||| |||||    
T  15206723 ttggtaccacatgcatgattaagaggtttaagttgcatagtcaagttgttaagtt 15206669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 46751882 - 46751832
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    ||||||||||||||||||||||| |||||||  |||||||||||| |||||    
T  46751882 tggttggtaccacatgcatgattaagaagatgtagttgcattgtcgagttg 46751832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 9577493 - 9577448
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  9577493 ttggtaccacatgcatgattaagaggattaagttgcatagtcaagt 9577448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 8492600 - 8492644
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtc 176  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||    
T  8492600 tggttggtaccacatgcatgattaagaagttgaagttgcattgtc 8492644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 12269325 - 12269285
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacata 81  Q
    |||| |||||||||||||||| ||||||| |||||||||||    
T  12269325 tgggtgagggcttgatgctctgtaatgtacatttatacata 12269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 10733284 - 10733424
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||| ||||||||||||||    
T  10733284 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttatcaagttgtcgagt 10733381  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  10733382 tgttaagttgttaaatcatgaaattgtttaaagctgtgattct 10733424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 29348271 - 29348131
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||| ||||||||||||||    
T  29348271 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttatcaagttgtcgagt 29348174  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  29348173 tgttaagttgttaaatcatgaaattgtttaaagctgtgattct 29348131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 29350744 - 29350604
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||| ||||||||||||||    
T  29350744 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttatcaagttgtcgagt 29350647  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  29350646 tgttaagttgttaaatcatgaaattgtttaaagctgtgattct 29350604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 42245709 - 42245849
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||| ||||||||||||||    
T  42245709 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttatcaagttgtcgagt 42245806  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  42245807 tgttaagttgttaaatcatgaaattgtttaaagctgtgattct 42245849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 29345798 - 29345650
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  29345798 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 29345701  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  29345700 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 29345650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 99 - 252
Target Start/End: Original strand, 265099 - 265258
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  265099 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 265196  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgat 252  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  265197 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgat 265258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 20908829 - 20908681
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  20908829 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 20908732  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||| |||||||||||| |||||||||||||||||||||||| |||||||||    
T  20908731 tgttgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 20908681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 136 - 255
Target Start/End: Complemental strand, 39363195 - 39363084
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaa 235  Q
    ||||||||||||||||||||||||||||||||||||| ||||||     | ||||   ||||||||||||||||||||||||||| ||||||||||||||    
T  39363195 ttggtaccacatgcatgattagaagattaagttgcatagtcaag-----aggtta---agttgtcaagttgtcgagttgttaagttgttaaatcatgaaa 39363104  T
Q  236 ttgtttaaagttgtgattct 255  Q
    |||||||||| |||||||||    
T  39363103 ttgtttaaagctgtgattct 39363084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 2155041 - 2155105
Alignment:
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2155041 tcaagttgtcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagttgtgattct 2155105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 136 - 255
Target Start/End: Complemental strand, 31144070 - 31143957
Alignment:
Q  136 ttggtaccacatgcatgattagaagatta--agttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatga 233  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||     | ||||   ||||||||||||||||||||||||||| ||||||||||||    
T  31144070 ttggtaccacatgcatgattagaagattataagttgcatagtcaag-----aggtta---agttgtcaagttgtcgagttgttaagttgttaaatcatga 31143979  T
Q  234 aattgtttaaagttgtgattct 255  Q
    |||||||||||| |||||||||    
T  31143978 aattgtttaaagctgtgattct 31143957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 5889533 - 5889624
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | ||  |||||| |||| |||||||| ||||||||||||||||||||    
T  5889533 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaaaggagagggcttgatgctctgtgagcctatttacgctcaata 5889624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 39244953 - 39244866
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaa 202  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |  |||||||||    
T  39244953 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcaagttgtggagttgtcaa 39244866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 21741915 - 21742006
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | ||  |||||| | || |||||||| ||||||||||||||||||||    
T  21741915 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaaaggagagggtttgatgctctgtgagcctatttacgctcaata 21742006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 2155002 - 2155038
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcat 172  Q
    |||||||||||||||||||||||||||||||||||||    
T  2155002 ttggtaccacatgcatgattagaagattaagttgcat 2155038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 26733122 - 26733169
Alignment:
Q  136 ttggtaccacatgcatgatta-gaagattaagttgcattgtcaagttg 182  Q
    ||||||||||||||||||||| || ||||||||||||| |||||||||    
T  26733122 ttggtaccacatgcatgattatgaggattaagttgcatagtcaagttg 26733169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 23202863 - 23202899
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcat 172  Q
    ||||||||||||||||||||||||| | |||||||||    
T  23202863 ttggtaccacatgcatgattagaagttgaagttgcat 23202899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 25251013 - 25251057
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtc 176  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||    
T  25251013 tggttggtaccacatgcatgattaagaagttgaagttgcattgtc 25251057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 25314798 - 25314842
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtc 176  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||    
T  25314798 tggttggtaccacatgcatgattaagaagttgaagttgcattgtc 25314842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 25742780 - 25742732
Alignment:
Q  135 gttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    ||||||||||||||||||||| |||||||  |||||||||||| |||||    
T  25742780 gttggtaccacatgcatgattaagaagatgtagttgcattgtcgagttg 25742732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 29915437 - 29915481
Alignment:
Q  88 gatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||||| ||| |||| |||||||| ||||||||||||||||||||    
T  29915437 gatgggcgagggcttgatgctctgtgagcctatttacgctcaata 29915481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 571214 - 571074
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||||||| ||||||||||||||    
T  571214 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttatcaagttgtcgagt 571117  T
Q  213 tgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  571116 tgttaagttgttaaatcatgaaattgtttaaagctgtgattct 571074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 136 - 255
Target Start/End: Original strand, 34402873 - 34402992
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaa 235  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  34402873 ttggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttgtcgagttgttaagttgttaaatcatgaaa 34402972  T
Q  236 ttgtttaaagttgtgattct 255  Q
    |||||||||| |||||||||    
T  34402973 ttgtttaaagctgtgattct 34402992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 18808774 - 18808612
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  18808774 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 18808677  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  18808676 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 18808612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 23709877 - 23710025
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  23709877 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 23709974  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  23709975 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 23710025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 24905977 - 24906125
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  24905977 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 24906074  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  24906075 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 24906125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 24908452 - 24908600
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  24908452 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 24908549  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  24908550 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 24908600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 24901023 - 24901171
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  24901023 gagcctatttacgctcaa-ata-ttggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 24901120  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  24901121 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 24901171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 24903500 - 24903648
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  24903500 gagcctatttacgctcaa-ata-ttggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 24903597  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  24903598 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 24903648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 113 - 253
Target Start/End: Complemental strand, 26507675 - 26507529
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  26507675 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 26507578  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgatt 253  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  26507577 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgatt 26507529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 113 - 250
Target Start/End: Complemental strand, 23135408 - 23135265
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  23135408 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 23135311  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtg 250  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||    
T  23135310 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtg 23135265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 99 - 255
Target Start/End: Original strand, 32039829 - 32039983
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttg 198  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||  || ||||| ||| ||||    
T  32039829 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaggttg 32039926  T
Q  199 tcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| || ||||||  ||| |||||||||||||||||||||||| |||||||||    
T  32039927 tcaagttatcaagttgtcgagttgttaaatcatgaaattgtttaaagctgtgattct 32039983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 113 - 244
Target Start/End: Complemental strand, 26505197 - 26505060
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  26505197 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 26505100  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaa 244  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  26505099 tgtcgagttgttaagttgttaaatcatgaaattgtttaaa 26505060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 39682131 - 39681983
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||| ||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||| ||    
T  39682131 gagcctatttacgctcaaa--gattgataccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaggt 39682034  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  39682033 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 39681983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 45030181 - 45030305
Alignment:
Q  95 gagagcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaa 194  Q
    |||||||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  45030181 gagagcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcgagttgtcaa 45030278  T
Q  195 g-ttgtcaagttgtcgagttgttaagt 220  Q
    | ||||||||||||||||||| |||||    
T  45030279 gattgtcaagttgtcgagttgataagt 45030305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 24898540 - 24898696
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcat----------------tgtcaagttgtcaagttatcaagt 196  Q
    ||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||                ||||||||||||||||| ||||||    
T  24898540 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttgtcaagt 24898637  T
Q  197 tgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    | |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  24898638 tatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 24898696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 32452105 - 32452219
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    |||||||||| ||||||||||||||| |||| |||||||||||| |||||||||||||||||||| |   ||||| |||| | || ||||||||||||||    
T  32452105 cattgcatacgcataatacgagatggtagagagcttgatgctctgtaatgtatatttatacataaaaaacgatggtagagggattgatgctctgagagcc 32452204  T
Q  118 tatttacgctcaata 132  Q
    |||||||||||||||    
T  32452205 tatttacgctcaata 32452219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 23130625 - 23130547
Alignment:
Q  177 aagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  23130625 aagttgtcaagttgtcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 23130547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 23133092 - 23133014
Alignment:
Q  177 aagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  23133092 aagttgtcaagttgtcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 23133014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 24529958 - 24530022
Alignment:
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24529958 tcaagttgtcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagttgtgattct 24530022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 28576930 - 28576842
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagtt 189  Q
    |||| |||| ||| ||||||||| ||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28576930 gcttgatgccctgggagcctattaacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcaagtt 28576842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 24529919 - 24529955
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcat 172  Q
    |||||||||||||||||||||||||||||||||||||    
T  24529919 ttggtaccacatgcatgattagaagattaagttgcat 24529955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 26392194 - 26392158
Alignment:
Q  153 attagaagattaagttgcattgtcaagttgtcaagtt 189  Q
    |||||||||||||||||||| ||||||||||||||||    
T  26392194 attagaagattaagttgcatagtcaagttgtcaagtt 26392158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 18547279 - 18547324
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  18547279 ttggtaccacatgcatgattaagaggattaagttgcatagtcaagt 18547324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 34136727 - 34136682
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||    
T  34136727 ttggtaccacatgcatgattaagaagaataagttgcatagtcaagt 34136682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 43947661 - 43947706
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  43947661 ttggtaccacatgcatgattaagaggattaagttgcatagtcaagt 43947706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 7672478 - 7672518
Alignment:
Q  46 gagggcttgatgctctataatgtatatttatacataatacg 86  Q
    ||||||||||||| || ||||||||||||||||||| ||||    
T  7672478 gagggcttgatgccctgtaatgtatatttatacatattacg 7672518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 9580 - 9418
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  9580 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 9483  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  9482 tcaagttgtcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 9418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 20578 - 20416
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  20578 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 20481  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  20480 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 20416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 94242 - 94080
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  94242 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 94145  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  94144 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 94080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 1484233 - 1484071
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  1484233 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 1484136  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  1484135 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 1484071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 20403058 - 20402896
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  20403058 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 20402961  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  20402960 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 20402896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 4542717 - 4542865
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  4542717 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 4542814  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  4542815 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 4542865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 5853636 - 5853784
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  5853636 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 5853733  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  5853734 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 5853784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 14823592 - 14823444
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  14823592 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 14823495  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  14823494 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 14823444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 99 - 252
Target Start/End: Complemental strand, 22001585 - 22001426
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagtta 190  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||     
T  22001585 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttg 22001488  T
Q  191 tcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgat 252  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  22001487 tcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgat 22001426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 19801601 - 19801715
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    |||||||||| ||||||||||||||| |||| |||||||||||| || ||||| ||||||||||||||| ||||| |||| |||| ||||||||||||||    
T  19801601 cattgcatacgcataatacgagatggtagagagcttgatgctctgtattgtatctttatacataatacgcgatggtagagggcttgatgctctgagagcc 19801700  T
Q  118 tatttacgctcaata 132  Q
    |||||||||||||||    
T  19801701 tatttacgctcaata 19801715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 136 - 255
Target Start/End: Complemental strand, 4483092 - 4482981
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaa 235  Q
    ||||||||||||||||||||||||||||||||||||| ||||||     | ||||   ||||||||||||||||||||||||||| ||||||||||||||    
T  4483092 ttggtaccacatgcatgattagaagattaagttgcatagtcaag-----aggtta---agttgtcaagttgtcgagttgttaagttgttaaatcatgaaa 4483001  T
Q  236 ttgtttaaagttgtgattct 255  Q
    |||||||||| |||||||||    
T  4483000 ttgtttaaagctgtgattct 4482981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 26225637 - 26225722
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaag-ttgtcaagttgtcgagttgttaagt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||| |||||    
T  26225637 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcgagttgtcaagattgtcaagttgtcgagttggtaagt 26225722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 18678439 - 18678517
Alignment:
Q  177 aagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  18678439 aagttgtcgagttgtcaagttgtcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 18678517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 18717628 - 18717706
Alignment:
Q  177 aagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  18717628 aagttgtcgagttgtcaagttgtcaagttgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 18717706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 20046482 - 20046597
Alignment:
Q  99 gcttaatgctctgagagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttg 198  Q
    |||| |||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  20046482 gcttgatgccctgggagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcaagttgtcgagttg 20046579  T
Q  199 tcaag-ttgtcgagttgt 215  Q
    ||||| ||||| ||||||    
T  20046580 tcaagattgtcaagttgt 20046597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 26219533 - 26219456
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaag-ttgtcaagttgtcgagt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  26219533 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcgagttgtcaagattgtcaagttgtcgagt 26219456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 38550365 - 38550458
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | || ||||||| |||| |||||||| ||||||||||||||||||||||    
T  38550365 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatatg 38550458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 39833724 - 39833641
Alignment:
Q  49 ggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||| |||| |||||||| ||||||||||||||||||||    
T  39833724 ggcttgatgctctgtaatgtatatttatacataatatgagaagggagagggcttgatgctctgtgagcctatttacgctcaata 39833641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 27472662 - 27472755
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| |||||||||||||||| |||| ||||||||||||||||| | || ||||||| |||| |||||||| |||||||||||| |||||||||    
T  27472662 tgggtgagggcttgatgctctgtaatatatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacactcaatatg 27472755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 13428416 - 13428509
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| ||||| |||||||||| |||||||||||||||||||||| | || |||| ||  ||| |||||||| ||||||||||||||||||||||    
T  13428416 tgggtgagggtttgatgctctgtaatgtatatttatacataatatgtgaagggaaaggacttgatgctctgtgagcctatttacgctcaatatg 13428509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 20983008 - 20983092
Alignment:
Q  50 gcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||||||||||| |||||||||||||||||||||| | || ||||||| | || ||| |||| ||||||||||||||||||||||    
T  20983008 gcttgatgctctgtaatgtatatttatacataatatgtgaagggagaggggttgatgttctgtgagcctatttacgctcaatatg 20983092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 1323454 - 1323544
Alignment:
Q  46 gagggcttgatgctctataatgtatatttatacataatacgagatgggagaga--gcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||||||||||||||| |||||||||||||||||||||| | || ||||||||  |||| ||| |||| |||| |||||||||||||||||    
T  1323454 gagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagagggcttgatgatctgtgagcttatttacgctcaatatg 1323544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 37515313 - 37515269
Alignment:
Q  137 tggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||    
T  37515313 tggtaccacatgcatgatttagaagattaagttgcatagtcaagt 37515269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 22253497 - 22253544
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  22253497 ttggtaccacatgcatgattaagaagataaagttgcatagtcaagttg 22253544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 24713242 - 24713207
Alignment:
Q  46 gagggcttgatgctctataatgtatatttatacata 81  Q
    |||||||||||||||| |||||||||||||||||||    
T  24713242 gagggcttgatgctctgtaatgtatatttatacata 24713207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 28397337 - 28397290
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||    
T  28397337 ttggtaccacatgcatgattaagaggattaagttgcatagtcaagttg 28397290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 13665582 - 13665632
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    ||||||||||||||||||||||| |||||||  |||||||||||| |||||    
T  13665582 tggttggtaccacatgcatgattaagaagatgtagttgcattgtcgagttg 13665632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 13724857 - 13724907
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    ||||||||||||||||||||||| |||||||  |||||||||||| |||||    
T  13724857 tggttggtaccacatgcatgattaagaagatgtagttgcattgtcgagttg 13724907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 20533746 - 20533796
Alignment:
Q  140 taccacatgcatgatta-gaagattaagttgcattgtcaagttgtcaagtt 189  Q
    ||||||||||||||||| || | ||||||||||| ||||||||||||||||    
T  20533746 taccacatgcatgattaagaggtttaagttgcatagtcaagttgtcaagtt 20533796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 18833223 - 18833178
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  18833223 ttggtaccacatgcatgattaagaagataaagttgcatagtcaagt 18833178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 19698999 - 19698950
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagtt 181  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||| ||||    
T  19698999 tggttggtaccacatgcatgattaagaagttgaagttgcattgtcgagtt 19698950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 20502434 - 20502479
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  20502434 ttggtaccacatgcatgattaagaggattaagttgcatagtcaagt 20502479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 22963745 - 22963790
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  22963745 ttggtaccacatgcatgattaagaggattaagttgcatagtcaagt 22963790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 84; Significance: 8e-40; HSPs: 3)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 136 - 255
Target Start/End: Complemental strand, 13743 - 13624
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaatcatgaaa 235  Q
    |||||||||||||||||||||||||||||||| |||| ||||||  || ||||| ||||||| |||||||||||||||||||||| ||||||||||||||    
T  13743 ttggtaccacatgcatgattagaagattaagtcgcatagtcaagaggttaagttgtcaagttatcaagttgtcgagttgttaagttgttaaatcatgaaa 13644  T
Q  236 ttgtttaaagttgtgattct 255  Q
    |||||||||| |||||||||    
T  13643 ttgtttaaagctgtgattct 13624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 20827 - 20920
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  | ||||||| |||| |||||||  ||||||||||||||||||||||    
T  20827 tgggtgagggcttgatgctctataatgtatatttatacataatacgcaaagggagagggcttgatgctcttggagcctatttacgctcaatatg 20920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 23765 - 23850
Alignment:
Q  49 ggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    ||||||| ||||| |||||||||||||||||||||||| || ||||||| |||| |||||||  ||||||||||||||||||||||    
T  23765 ggcttgacgctctgtaatgtatatttatacataatacgcgaagggagagggcttgatgctcttggagcctatttacgctcaatatg 23850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 13209 - 13061
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  13209 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 13112  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  13111 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 13061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 37639 - 37491
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  37639 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 37542  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  37541 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 37491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 40218 - 40070
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  40218 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 40121  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  40120 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 40070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 83; Significance: 3e-39; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 136498 - 136350
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  136498 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 136401  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  136400 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 136350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 138967 - 138819
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  138967 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 138870  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  138869 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 138819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 143905 - 143757
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  143905 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 143808  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  143807 tgtcgagttgttaagttgttaaatcatgaaattgtttaaagctgtgattct 143757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 134029 - 133881
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  134029 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 133932  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  133931 tgtcgagttgttaagttgtgaaatcatgaaattgtttaaagctgtgattct 133881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 141436 - 141288
Alignment:
Q  113 gagcctatttacgctcaatatggttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagt 204  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||        |||||||||| ||||||| ||||||    
T  141436 gagcctatttacgctcaaa--gattggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcaagttgtcaagttatcaagt 141339  T
Q  205 tgtcgagttgttaagtagttaaatcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  141338 tgtcgagttgttaagttgtgaaatcatgaaattgtttaaagctgtgattct 141288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 13294 - 13151
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    ||||||||| |||||||| |||||||| |||||||||||||||| ||||||||||||||||| |||  |||||||||||| |||| |||||||| |||||    
T  13294 cattgcatattcataatatgagatgggggagggcttgatgctctgtaatgtatatttatacacaatctgagatgggagagggcttgatgctctgggagcc 13195  T
Q  118 tatttacgctcaata-----tggttggtaccacatgcatgatta 156  Q
    |||||||||||||||     || |||||||||||||||||||||    
T  13194 tatttacgctcaatatgatttgattggtaccacatgcatgatta 13151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 24995 - 24853
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    ||||||| | |||||||  |||||||| || ||||||||||||| ||||||||||| ||||| |||  |||||||||||| |||| |||||||| |||||    
T  24995 cattgcacattcataatctgagatgggggacggcttgatgctctgtaatgtatatt-atacacaatctgagatgggagagggcttgatgctctgggagcc 24897  T
Q  118 tatttacgctcaata-----tggttggtaccacatgcatgatta 156  Q
    |||||||||||||||     || |||||||||||||||||||||    
T  24896 tatttacgctcaatatgatttgattggtaccacatgcatgatta 24853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 34881 - 34738
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||  |||||||||||| |||| |||||||| |||||    
T  34881 cattgcatattcataatacgagatgggggagggcttgatgctctgtaatgtatatttatacacaatctgagatgggagagggcttgatgctctgggagcc 34782  T
Q  118 tatttacgctcaata-----tggttggtaccacatgcatgatta 156  Q
    |||||| ||||||||     || |||||||||||||||||||||    
T  34781 tatttatgctcaatatgatttgattggtaccacatgcatgatta 34738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 11908 - 11794
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    |||||||||  |||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||    
T  11908 cattgcatatgcataatacgagatgggagagagcttgattctctgtaatgtatatttatacataatacgcgatggtagagggcttgatgctctgagagcc 11809  T
Q  118 tatttacgctcaata 132  Q
    |||||||||||||||    
T  11808 tatttacgctcaata 11794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 79504 - 79618
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    |||||||||| ||||||||  ||||| |||| |||||||||||| |||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||    
T  79504 cattgcatacgcataatacatgatggtagagagcttgatgctctgtaatgtatatttatacataatacgcgatggtagagggcttgatgctctgagagcc 79603  T
Q  118 tatttacgctcaata 132  Q
    |||||||||||||||    
T  79604 tatttacgctcaata 79618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 52059 - 52173
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    |||||||||| ||||||||||||||| |||  |||||||||||| |||||||||||||||||||| ||| ||||| |||| |||| ||||||||||||||    
T  52059 cattgcatacgcataatacgagatggtagatagcttgatgctctgtaatgtatatttatacataacacgcgatggtagagggcttgatgctctgagagcc 52158  T
Q  118 tatttacgctcaata 132  Q
    |||||||||||||||    
T  52159 tatttacgctcaata 52173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 136 - 255
Target Start/End: Original strand, 158797 - 158924
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaag--------ttgtcaagttatcaagttgtcaagttgtcgagttgttaagtagttaaa 227  Q
    ||||||||||||||||||||||||||||||||||||| ||||||        ||||| |||| ||||||| |||||||||||||||||||||| ||||||    
T  158797 ttggtaccacatgcatgattagaagattaagttgcatagtcaagaggttaagttgtcgagttgtcaagttatcaagttgtcgagttgttaagttgttaaa 158896  T
Q  228 tcatgaaattgtttaaagttgtgattct 255  Q
    |||||||||||||||||| |||||||||    
T  158897 tcatgaaattgtttaaagctgtgattct 158924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 95352 - 95312
Alignment:
Q  46 gagggcttgatgctctataatgtatatttatacataatacg 86  Q
    ||||||||||||||||| |||||||||| ||||||| ||||    
T  95352 gagggcttgatgctctagaatgtatattcatacatattacg 95312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 74583 - 74467
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcc 117  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||| ||||||||||||||||| |||  |||||||||||| |||| ||| |||| ||| |    
T  74583 cattgcatattcataatacgagatgggggagggtttgatgctctgtaatgtatatttatacacaatctgagatgggagagggcttgatgttctgggagtc 74484  T
Q  118 tatttacgctcaatatg 134  Q
    |||||| ||||||||||    
T  74483 tatttatgctcaatatg 74467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 44158 - 44251
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | || ||||||| |||| |||||||| ||||||||||||||||||||||    
T  44158 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatatg 44251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 20598 - 20691
Alignment:
Q  18 cattgcatactcataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctg 111  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||  ||||| |||||| || ||||||||    
T  20598 cattgcatacgcataatacgagatggtagagagcttgatgctctataatgtatatttatacataatacacgatggcagagaggttgatgctctg 20691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 20658 - 20761
Alignment:
Q  29 cataatacgagatgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctc 128  Q
    ||||||||  ||||| |||| | |||||||||| |||||||||||||||||||||||| ||||| |||| |||| ||||||| |||||||||||||||||    
T  20658 cataatacacgatggcagagaggttgatgctctgtaatgtatatttatacataatacgcgatggtagagggcttgatgctctaagagcctatttacgctc 20757  T
Q  129 aata 132  Q
    ||||    
T  20758 aata 20761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 47049 - 47140
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | |||||||||| |||| ||| |||| ||||||||||||||||||||    
T  47049 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgatgggagagggcttgatgttctgtgagcctatttacgctcaata 47140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 106301 - 106219
Alignment:
Q  52 ttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    |||||||||| |||||||||||||||||||||| | || |||||||||||| |||||||  ||||||||||||||||||||||    
T  106301 ttgatgctctgtaatgtatatttatacataatatgtgaagggagagagcttgatgctctatgagcctatttacgctcaatatg 106219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 49 - 134
Target Start/End: Complemental strand, 135 - 50
Alignment:
Q  49 ggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaatatg 134  Q
    ||||||| ||||| |||||||||||||||||||||||| || ||||||| |||| |||||||  ||||||||||||||||||||||    
T  135 ggcttgacgctctgtaatgtatatttatacataatacgcgaagggagagggcttgatgctcttggagcctatttacgctcaatatg 50  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 116234 - 116154
Alignment:
Q  136 ttggtaccacatgcatgattagaagattaagttgcattgtcaagttgtcaagttatcaagttgtcaag-ttgtcgagttgt 215  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |  |||||||||| ||||| ||||||    
T  116234 ttggtaccacatgcatgattagaagattaagttgcatagtcaagttgtcaagttgttgagttgtcaagattgtcaagttgt 116154  T

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Target: scaffold0810 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 2792 - 2701
Alignment:
Q  41 tgggagagggcttgatgctctataatgtatatttatacataatacgagatgggagagagcttaatgctctgagagcctatttacgctcaata 132  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | || ||||||| |||| || ||||| |||||||||| |||||||||    
T  2792 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatactctgtgagcctatttgcgctcaata 2701  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 28211 - 28161
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    ||||||||||||||||||||||| ||||| || ||||||||||||||||||    
T  28211 tggttggtaccacatgcatgattaagaagttttagttgcattgtcaagttg 28161  T

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Target: scaffold1351 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 1437 - 1402
Alignment:
Q  46 gagggcttgatgctctataatgtatatttatacata 81  Q
    |||||||||||||||| |||||||||||||||||||    
T  1437 gagggcttgatgctctgtaatgtatatttatacata 1402  T

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Target: scaffold0117 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 41220 - 41255
Alignment:
Q  46 gagggcttgatgctctataatgtatatttatacata 81  Q
    ||||||||||||| ||||||||||||||||||||||    
T  41220 gagggcttgatgccctataatgtatatttatacata 41255  T

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Target: scaffold0040 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 10926 - 10879
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagttg 182  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  10926 ttggtaccacatgcatgattaagaagatgaagttgcatagtcaagttg 10879  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 76772 - 76737
Alignment:
Q  46 gagggcttgatgctctataatgtatatttatacata 81  Q
    |||||||||||||||| |||||||||||||||||||    
T  76772 gagggcttgatgctctgtaatgtatatttatacata 76737  T

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Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 497250 - 497205
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  497250 ttggtaccacatgcatgattaagaggattaagttgcatagtcaagt 497205  T

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Target: scaffold0853 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 2997 - 3042
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  2997 ttggtaccacatgcatgattaagaagataaagttgcatagtcaagt 3042  T

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Target: scaffold0485 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 9959 - 9914
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  9959 ttggtaccacatgcatgattaagaggattaagttgcatagtcaagt 9914  T

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Target: scaffold0396 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 1681 - 1636
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  1681 ttggtaccacatgcatgattaagaagataaagttgcatagtcaagt 1636  T

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Target: scaffold0347 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 8677 - 8632
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  8677 ttggtaccacatgcatgattaagaggattaagttgcatagtcaagt 8632  T

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Target: scaffold0293 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 17291 - 17246
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||    
T  17291 ttggtaccacatgcatgattaagaagaataagttgcatagtcaagt 17246  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 38448 - 38493
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  38448 ttggtaccacatgcatgattaagaggattaagttgcatagtcaagt 38493  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 6802 - 6757
Alignment:
Q  136 ttggtaccacatgcatgatt-agaagattaagttgcattgtcaagt 180  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||    
T  6802 ttggtaccacatgcatgattaagaagaataagttgcatagtcaagt 6757  T

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Target: scaffold0379 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 14911 - 14955
Alignment:
Q  133 tggttggtaccacatgcatgatt-agaagattaagttgcattgtc 176  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||    
T  14911 tggttggtaccacatgcatgattaagaagatgtagttgcattgtc 14955  T

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