View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3710_high_108 (Length: 237)
Name: NF3710_high_108
Description: NF3710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3710_high_108 |
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Alignment Details
Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 26158609 - 26158392
Alignment:
| Q |
1 |
actcataacttatgagaaaactattaataaaattgcataatgataaaaagtgtacgctaatctatgaaacaatgacacaaatatgaacaccaaacaggac |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| | ||| |||||| ||| |
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| T |
26158609 |
actcataacttatgagaaaactattaataaaattgcataatgacaaaaaatgtacgctaatctatgaaacaatgacacaaatacggacatcaaacacgac |
26158510 |
T |
|
| Q |
101 |
aatgacacaccgtcaccggtagcaattgnnnnnnntaacataactgatcacactgtgtctcacaccaaatacgtctgtaatcaaaagtatcggtgctaaa |
200 |
Q |
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||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||| |
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| T |
26158509 |
aatgacacatcgtcaacggtagcaattg-aaaaaataacataactgatcacactgtgtctgacaccaaacacgtctttaatcaaaagtatcggtgctaag |
26158411 |
T |
|
| Q |
201 |
gtgagaattgaactctgat |
219 |
Q |
| |
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||||||||||||||||||| |
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| T |
26158410 |
gtgagaattgaactctgat |
26158392 |
T |
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