View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3710_high_42 (Length: 390)

Name: NF3710_high_42
Description: NF3710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3710_high_42
NF3710_high_42
[»] chr7 (41 HSPs)
chr7 (75-220)||(32884179-32884324)
chr7 (75-191)||(8675739-8675856)
chr7 (75-188)||(29893380-29893493)
chr7 (75-188)||(37972561-37972674)
chr7 (75-191)||(12740778-12740894)
chr7 (75-179)||(41827736-41827840)
chr7 (75-188)||(18838818-18838931)
chr7 (75-188)||(33891918-33892031)
chr7 (75-188)||(37328315-37328428)
chr7 (75-188)||(23101699-23101812)
chr7 (75-188)||(29614479-29614592)
chr7 (75-176)||(33383082-33383183)
chr7 (75-188)||(44256439-44256552)
chr7 (75-181)||(43172115-43172221)
chr7 (75-188)||(510054-510167)
chr7 (75-188)||(7993565-7993678)
chr7 (75-188)||(28034532-28034645)
chr7 (75-188)||(28342719-28342832)
chr7 (75-188)||(29585922-29586035)
chr7 (79-188)||(40460398-40460507)
chr7 (75-174)||(39028495-39028594)
chr7 (75-185)||(44121620-44121730)
chr7 (72-191)||(16709393-16709510)
chr7 (72-191)||(17683629-17683746)
chr7 (76-191)||(42610579-42610694)
chr7 (75-188)||(39784515-39784628)
chr7 (110-191)||(48136909-48136990)
chr7 (75-188)||(3023342-3023455)
chr7 (75-191)||(26201813-26201929)
chr7 (73-180)||(4639908-4640015)
chr7 (73-179)||(27148804-27148910)
chr7 (112-189)||(11735215-11735292)
chr7 (115-224)||(37915886-37915995)
chr7 (75-191)||(14741387-14741503)
chr7 (185-250)||(21486222-21486287)
chr7 (115-191)||(21024067-21024143)
chr7 (116-191)||(14732318-14732393)
chr7 (137-187)||(30823108-30823158)
chr7 (76-143)||(5772106-5772171)
chr7 (115-191)||(33497116-33497192)
chr7 (75-103)||(47067167-47067195)
[»] chr8 (32 HSPs)
chr8 (76-191)||(12522531-12522646)
chr8 (75-188)||(10295017-10295130)
chr8 (75-188)||(31625718-31625831)
chr8 (75-188)||(9288172-9288285)
chr8 (75-188)||(19717552-19717665)
chr8 (75-191)||(43166351-43166467)
chr8 (73-191)||(8029864-8029982)
chr8 (75-188)||(18305654-18305767)
chr8 (75-188)||(18958405-18958518)
chr8 (83-188)||(32497959-32498064)
chr8 (74-253)||(6388074-6388266)
chr8 (75-188)||(26856515-26856628)
chr8 (75-188)||(42305282-42305395)
chr8 (75-188)||(16364116-16364229)
chr8 (75-220)||(24082173-24082318)
chr8 (75-188)||(39467196-39467309)
chr8 (78-188)||(43308186-43308296)
chr8 (75-188)||(14781810-14781923)
chr8 (75-188)||(44725469-44725582)
chr8 (116-191)||(41393958-41394033)
chr8 (115-180)||(24067107-24067172)
chr8 (75-191)||(19484176-19484292)
chr8 (76-191)||(17234676-17234791)
chr8 (120-249)||(27878591-27878729)
chr8 (120-249)||(28018772-28018910)
chr8 (76-160)||(7760770-7760854)
chr8 (103-178)||(7466759-7466834)
chr8 (105-151)||(12522485-12522531)
chr8 (118-249)||(27915535-27915675)
chr8 (118-249)||(27961954-27962094)
chr8 (115-179)||(37131322-37131386)
chr8 (115-191)||(26620369-26620445)
[»] chr1 (47 HSPs)
chr1 (75-190)||(5494772-5494887)
chr1 (75-191)||(45272976-45273092)
chr1 (75-188)||(46328395-46328508)
chr1 (75-219)||(9322153-9322297)
chr1 (74-249)||(47371531-47371715)
chr1 (76-191)||(3583579-3583694)
chr1 (75-178)||(8140919-8141022)
chr1 (76-191)||(28403969-28404084)
chr1 (75-188)||(6312985-6313098)
chr1 (75-188)||(15834710-15834823)
chr1 (75-188)||(25612501-25612614)
chr1 (75-188)||(29396110-29396223)
chr1 (75-191)||(48966514-48966630)
chr1 (75-180)||(38535830-38535935)
chr1 (75-180)||(38558048-38558153)
chr1 (75-188)||(51702004-51702117)
chr1 (75-151)||(25830962-25831038)
chr1 (76-183)||(49971627-49971734)
chr1 (75-188)||(48177118-48177232)
chr1 (75-191)||(49453083-49453200)
chr1 (72-191)||(49236989-49237108)
chr1 (74-180)||(32760133-32760230)
chr1 (72-191)||(52182305-52182424)
chr1 (75-188)||(18798866-18798974)
chr1 (86-191)||(25253486-25253591)
chr1 (75-191)||(35177233-35177350)
chr1 (75-191)||(4005049-4005165)
chr1 (75-179)||(5209403-5209507)
chr1 (75-191)||(26757597-26757713)
chr1 (86-191)||(27257881-27257986)
chr1 (115-188)||(49231456-49231529)
chr1 (75-191)||(1243329-1243445)
chr1 (75-191)||(8147299-8147415)
chr1 (75-179)||(9192006-9192110)
chr1 (75-191)||(41353403-41353519)
chr1 (75-191)||(51106874-51106990)
chr1 (75-140)||(28387141-28387206)
chr1 (75-191)||(3593237-3593344)
chr1 (115-199)||(18954487-18954571)
chr1 (115-191)||(7798522-7798598)
chr1 (113-191)||(1108372-1108450)
chr1 (121-191)||(33886883-33886953)
chr1 (121-191)||(33957297-33957367)
chr1 (115-179)||(2293411-2293475)
chr1 (115-199)||(8122211-8122294)
chr1 (115-191)||(11579123-11579199)
chr1 (128-188)||(42304526-42304586)
[»] chr4 (43 HSPs)
chr4 (75-188)||(49501211-49501324)
chr4 (75-188)||(49507276-49507389)
chr4 (69-191)||(32889851-32889973)
chr4 (75-185)||(32322476-32322586)
chr4 (75-191)||(29510092-29510208)
chr4 (75-188)||(30967021-30967134)
chr4 (75-188)||(5800374-5800487)
chr4 (75-188)||(23987607-23987719)
chr4 (75-188)||(27768474-27768587)
chr4 (76-188)||(28484306-28484419)
chr4 (75-188)||(41725523-41725636)
chr4 (75-188)||(49834512-49834625)
chr4 (75-188)||(50018602-50018715)
chr4 (75-188)||(54341552-54341665)
chr4 (76-199)||(33138771-33138885)
chr4 (75-188)||(48261488-48261601)
chr4 (75-188)||(51321266-51321379)
chr4 (75-191)||(23671400-23671516)
chr4 (75-188)||(5441812-5441925)
chr4 (75-188)||(29855926-29856039)
chr4 (75-188)||(37828108-37828221)
chr4 (75-178)||(54853164-54853267)
chr4 (86-191)||(871782-871886)
chr4 (74-191)||(46286678-46286786)
chr4 (75-191)||(50517163-50517270)
chr4 (75-179)||(55165486-55165590)
chr4 (113-191)||(26491149-26491227)
chr4 (75-148)||(32683746-32683818)
chr4 (75-151)||(37916211-37916287)
chr4 (72-191)||(29469121-29469240)
chr4 (76-189)||(24966547-24966651)
chr4 (75-191)||(8084170-8084286)
chr4 (115-191)||(51967278-51967354)
chr4 (114-191)||(42937437-42937514)
chr4 (119-199)||(41470344-41470424)
chr4 (115-191)||(46862941-46863017)
chr4 (115-191)||(6487344-6487420)
chr4 (113-173)||(40487703-40487763)
chr4 (115-190)||(56424002-56424077)
chr4 (113-199)||(2326680-2326765)
chr4 (76-113)||(12754489-12754526)
chr4 (157-210)||(12754539-12754592)
chr4 (115-180)||(14334395-14334460)
[»] scaffold0110 (1 HSPs)
scaffold0110 (83-191)||(39311-39419)
[»] scaffold1128 (1 HSPs)
scaffold1128 (72-190)||(929-1047)
[»] scaffold0042 (1 HSPs)
scaffold0042 (75-188)||(57743-57856)
[»] chr3 (38 HSPs)
chr3 (75-188)||(52810766-52810879)
chr3 (80-188)||(20833310-20833418)
chr3 (75-191)||(21386508-21386624)
chr3 (75-229)||(48379558-48379721)
chr3 (75-188)||(37455255-37455368)
chr3 (75-188)||(52617651-52617764)
chr3 (77-188)||(17946638-17946749)
chr3 (75-178)||(18750051-18750154)
chr3 (76-186)||(7437600-7437710)
chr3 (75-188)||(31645940-31646053)
chr3 (75-188)||(51737366-51737479)
chr3 (75-188)||(54629259-54629372)
chr3 (75-179)||(44905543-44905647)
chr3 (75-188)||(23753068-23753181)
chr3 (75-188)||(26107737-26107850)
chr3 (75-188)||(39038498-39038611)
chr3 (84-258)||(33693226-33693409)
chr3 (75-188)||(40897539-40897652)
chr3 (75-160)||(50761807-50761892)
chr3 (75-188)||(50902988-50903101)
chr3 (118-259)||(16155168-16155318)
chr3 (76-190)||(43172889-43173003)
chr3 (74-191)||(4962755-4962872)
chr3 (75-180)||(7665552-7665657)
chr3 (87-191)||(45602441-45602545)
chr3 (75-151)||(45863231-45863307)
chr3 (75-188)||(36673831-36673944)
chr3 (75-191)||(49296077-49296193)
chr3 (75-191)||(8598620-8598736)
chr3 (76-176)||(21718452-21718552)
chr3 (115-190)||(25049872-25049947)
chr3 (115-251)||(49458359-49458504)
chr3 (75-191)||(42736268-42736384)
chr3 (115-188)||(22489511-22489584)
chr3 (75-191)||(53835923-53836039)
chr3 (113-191)||(53645337-53645415)
chr3 (115-191)||(9818588-9818664)
chr3 (115-191)||(40064279-40064355)
[»] chr2 (36 HSPs)
chr2 (75-179)||(214945-215049)
chr2 (75-188)||(6224256-6224369)
chr2 (74-191)||(15224190-15224307)
chr2 (75-188)||(28739973-28740086)
chr2 (75-188)||(7027313-7027426)
chr2 (75-188)||(25288573-25288686)
chr2 (75-191)||(34342199-34342315)
chr2 (76-191)||(40829596-40829713)
chr2 (75-188)||(10657840-10657953)
chr2 (75-188)||(28844995-28845108)
chr2 (75-179)||(13833107-13833211)
chr2 (75-185)||(379340-379450)
chr2 (86-255)||(2308665-2308843)
chr2 (75-188)||(33136028-33136139)
chr2 (75-188)||(3575251-3575364)
chr2 (75-188)||(26789195-26789308)
chr2 (74-253)||(31847171-31847360)
chr2 (75-178)||(18177681-18177784)
chr2 (74-191)||(18899952-18900069)
chr2 (76-140)||(3464051-3464115)
chr2 (115-191)||(35404343-35404419)
chr2 (130-258)||(18727595-18727732)
chr2 (115-191)||(3991774-3991850)
chr2 (115-199)||(12877687-12877771)
chr2 (115-191)||(15926379-15926455)
chr2 (118-181)||(11153384-11153447)
chr2 (115-191)||(19948539-19948615)
chr2 (115-191)||(33262854-33262930)
chr2 (115-191)||(38413478-38413554)
chr2 (113-191)||(13898475-13898553)
chr2 (113-191)||(14039092-14039170)
chr2 (113-179)||(32242242-32242308)
chr2 (113-191)||(32293912-32293989)
chr2 (86-191)||(3858446-3858551)
chr2 (76-151)||(43305035-43305111)
chr2 (75-103)||(43825299-43825327)
[»] chr6 (23 HSPs)
chr6 (73-191)||(16438665-16438783)
chr6 (75-253)||(2606856-2607043)
chr6 (75-188)||(7497507-7497620)
chr6 (75-188)||(30384743-30384856)
chr6 (75-191)||(31975675-31975791)
chr6 (75-188)||(31067841-31067954)
chr6 (75-188)||(14262115-14262228)
chr6 (75-188)||(34758758-34758871)
chr6 (75-188)||(4200130-4200243)
chr6 (75-188)||(31896046-31896159)
chr6 (78-210)||(28900842-28900965)
chr6 (76-180)||(3000202-3000306)
chr6 (75-191)||(1463694-1463810)
chr6 (75-191)||(6788061-6788177)
chr6 (73-191)||(10113803-10113921)
chr6 (126-216)||(33641286-33641376)
chr6 (115-191)||(31535083-31535159)
chr6 (115-199)||(7835379-7835463)
chr6 (113-179)||(13461372-13461438)
chr6 (75-141)||(34773807-34773872)
chr6 (115-191)||(8779604-8779680)
chr6 (115-191)||(31996271-31996347)
chr6 (116-191)||(21199556-21199631)
[»] chr5 (22 HSPs)
chr5 (75-185)||(1460828-1460938)
chr5 (75-188)||(4240145-4240258)
chr5 (75-188)||(4549937-4550050)
chr5 (75-188)||(13926341-13926454)
chr5 (75-188)||(37014264-37014377)
chr5 (75-229)||(34218430-34218584)
chr5 (72-191)||(16548869-16548988)
chr5 (75-188)||(5949522-5949634)
chr5 (76-188)||(40013384-40013496)
chr5 (86-191)||(29716815-29716920)
chr5 (75-188)||(39852780-39852893)
chr5 (75-191)||(5651211-5651327)
chr5 (77-193)||(15672703-15672819)
chr5 (75-188)||(13999773-13999886)
chr5 (75-191)||(7125189-7125305)
chr5 (71-191)||(37798144-37798263)
chr5 (76-179)||(21489862-21489965)
chr5 (115-196)||(25868800-25868881)
chr5 (115-191)||(2675098-2675174)
chr5 (75-191)||(28623191-28623307)
chr5 (118-191)||(21238783-21238856)
chr5 (115-151)||(29758707-29758743)
[»] scaffold1504 (1 HSPs)
scaffold1504 (75-188)||(1276-1389)
[»] scaffold0543 (1 HSPs)
scaffold0543 (75-188)||(10934-11047)
[»] scaffold0013 (1 HSPs)
scaffold0013 (75-258)||(89241-89424)
[»] scaffold0573 (1 HSPs)
scaffold0573 (78-210)||(8829-8952)
[»] scaffold0383 (1 HSPs)
scaffold0383 (142-188)||(16708-16754)
[»] scaffold0152 (2 HSPs)
scaffold0152 (142-188)||(20944-20990)
scaffold0152 (142-188)||(28811-28857)
[»] scaffold0246 (1 HSPs)
scaffold0246 (113-173)||(25642-25702)


Alignment Details
Target: chr7 (Bit Score: 94; Significance: 9e-46; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 75 - 220
Target Start/End: Original strand, 32884179 - 32884324
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| ||||||||  |||||||||| ||||||||||    
T  32884179 caatgttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgagttaactctgaggtaaactctgtttctggta 32884278  T
Q  175 aaatcgaaaggtttgaccgagttaaaactcgataaattcgtgtaaa 220  Q
    |||||| |||||||||| ||||||| ||||| |||| |||||||||    
T  32884279 aaatcggaaggtttgactgagttaacactcggtaaactcgtgtaaa 32884324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 8675739 - 8675856
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt- 173  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||||     
T  8675739 caatgtttcgcaaatcgagtgttaactctccgagattaccgagttaacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcggtttctggta 8675838  T
Q  174 aaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||    
T  8675839 aaaatcgaaaggtttgac 8675856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 29893380 - 29893493
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| |||||| |||| ||||||||||||||||  ||||||||||||||||||||     
T  29893380 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaagtacaaaaatcgtgttaactctgaggtaaactcagtttctggtg 29893479  T
Q  175 aaatcgaaaggttt 188  Q
    ||||||||||||||    
T  29893480 aaatcgaaaggttt 29893493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 37972674 - 37972561
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||||| || ||| |||| |||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  37972674 caatgttccgcaaatcgagtgttaactttctgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgagataaactcagtttctggta 37972575  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  37972574 aaatcggaaggttt 37972561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 12740778 - 12740894
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||  |||||||||| || |||||||    
T  12740778 caatgttacgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtgtctggta 12740877  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||| | ||||||||||    
T  12740878 aaattggaaggtttgac 12740894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 75 - 179
Target Start/End: Original strand, 41827736 - 41827840
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||| |||||||||||||| ||| ||| ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  41827736 caatgttccgcaaattgagtgttaactctctgagattattgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggta 41827835  T
Q  175 aaatc 179  Q
    |||||    
T  41827836 aaatc 41827840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 18838818 - 18838931
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  18838818 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18838917  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  18838918 aaattggaaggttt 18838931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 33892031 - 33891918
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  33892031 caatgttccgcaaatcgagtgttaactctccgagattaccaagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcggtttctggta 33891932  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  33891931 aaattggaaggttt 33891918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 37328315 - 37328428
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||| |||||||||| |||  |||||||||||||||||||| ||||||||||||||||  ||||||||||  |||||||||    
T  37328315 caatgttccgcaaatcgagtgttgactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaactcgatttctggta 37328414  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  37328415 aaatcggaaggttt 37328428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 23101699 - 23101812
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| |||||||||||||    
T  23101699 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctaaggtaaaatcagtttctggta 23101798  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  23101799 aaattggaaggttt 23101812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 29614592 - 29614479
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  29614592 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 29614493  T
Q  175 aaatcgaaaggttt 188  Q
    |||| |||||||||    
T  29614492 aaattgaaaggttt 29614479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 33383082 - 33383183
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||  || ||||||| ||||||| ||    
T  33383082 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtggtaactctgagataaactcggtttctgata 33383181  T
Q  175 aa 176  Q
    ||    
T  33383182 aa 33383183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 44256552 - 44256439
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||||||||||| ||| ||||||||||||||||  ||||||||||  |||||||||    
T  44256552 caatgtcccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttagatacaaaaatcgtgttaactctgaggtaaactcgatttctggta 44256453  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  44256452 aaatcggaaggttt 44256439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 43172115 - 43172221
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||| ||||||| |||||||||  ||||||||||  |||||||||    
T  43172115 caatgttccgcaaatcgagtgttaactctctgagtttaccgagtttacatttttaggtatcaaaatcatgttaactcggaggtaaactcgatttctggta 43172214  T
Q  175 aaatcga 181  Q
    |||||||    
T  43172215 aaatcga 43172221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 510054 - 510167
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  510054 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 510153  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  510154 aaattggaaggttt 510167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 7993565 - 7993678
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||| ||  |||||| |||| |||||||||||||||   |||||||||| ||||||||||    
T  7993565 caatgttccgcaaatcgagtgttaactctccgagattaccgagtatatatttttaagtacaaaaatcgtgttaactatgaggtaaactcggtttctggta 7993664  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  7993665 aaatcggaaggttt 7993678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 28034645 - 28034532
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||  | ||||| || ||||||||||    
T  28034645 caatgttccgcaaatcgagtgttaactctctgagattaccgagtttacgtttttatgtacaaaaatcgtgttaactctgatgtaaaatcggtttctggta 28034546  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  28034545 aaattggaaggttt 28034532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 28342719 - 28342832
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  28342719 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 28342818  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  28342819 aaattggaaggttt 28342832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 29585922 - 29586035
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||| || |||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||| || ||||| ||||    
T  29585922 caatgttccgcagattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaagtcggtttcgggta 29586021  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  29586022 aaatcggaaggttt 29586035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 40460507 - 40460398
Alignment:
Q  79 gttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaat 178  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||| |||||||||| ||||||||||||||||  ||||||| || ||||||||||||||    
T  40460507 gttccgcaaatcgagtgttaactcttcgagattaccgagtttacgcttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaat 40460408  T
Q  179 cgaaaggttt 188  Q
     | |||||||    
T  40460407 tggaaggttt 40460398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 39028495 - 39028594
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| |||| |||||  ||||||| || ||||||||||    
T  39028495 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaattgtgtaaactctgaggtaaaatcggtttctggta 39028594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 44121730 - 44121620
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||| ||||||||||||||||||||||||| ||| |||| || ||||||||||||||||| |||||||||||||||   ||||||| || ||||||||||    
T  44121730 caatattccgcaaatcgagtgttaactctctgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactatgaggtaaattcggtttctggta 44121631  T
Q  175 aaatcgaaagg 185  Q
    |||||| ||||    
T  44121630 aaatcggaagg 44121620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 16709393 - 16709510
Alignment:
Q  72 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 171  Q
    ||||||||||||||||||| |||||||||  |  ||| |||| |||||||||||||||||||||||||||||| ||||||  ||||||||||||||  ||    
T  16709393 aagcaatgttccgcaaatcaagtgttaacattatgagtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactcagtt--tg 16709490  T
Q  172 gtaaaatcgaaaggtttgac 191  Q
    ||||| ||| ||||||||||    
T  16709491 gtaaactcggaaggtttgac 16709510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 17683629 - 17683746
Alignment:
Q  72 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 171  Q
    ||||||||||||||||||| |||||||||  |  ||| |||| |||||||||||||||||||||||||||||| ||||||  ||||||||||||||  ||    
T  17683629 aagcaatgttccgcaaatcaagtgttaacattatgagtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactcagtt--tg 17683726  T
Q  172 gtaaaatcgaaaggtttgac 191  Q
    ||||| ||| ||||||||||    
T  17683727 gtaaactcggaaggtttgac 17683746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 42610579 - 42610694
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    |||||||||||||| |||||||||||||| ||| |||| || ||||||| ||||||||||||||||||||||| |   |||||||||  |||||||||||    
T  42610579 aatgttccgcaaattgagtgttaactctctgagtttaccgaatttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaacttggtttctggtaa 42610678  T
Q  176 aatcgaaaggtttgac 191  Q
    ||||  ||||||||||    
T  42610679 aatcagaaggtttgac 42610694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 39784515 - 39784628
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||| |||||||||||||| ||| |||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  39784515 caatgttccgtaaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 39784614  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  39784615 aaattggaaggttt 39784628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 48136990 - 48136909
Alignment:
Q  110 ttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||   ||||||||||    
T  48136990 ttaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcagtttctggtaaaattagaaggtttgac 48136909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 3023342 - 3023455
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||| |||||||||||||||||||||||||||| |||  ||||||| |||||||||||| |||||| ||||||||   ||||||| || ||||||| ||    
T  3023342 caatgatccgcaaatcgagtgttaactctccgagattatcgagtttatgtttttaggtacaaaaatcatgttaactttgaggtaaaatcggtttctgata 3023441  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  3023442 aaattggaaggttt 3023455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 26201929 - 26201813
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| |||||||||||||||||  ||||| |||| || ||||| |||||||||||||||||||||| |||||  ||||||||||| ||  || ||    
T  26201929 caatgttccacaaatcgagtgttaacttgccgagtttaccgaatttacatttttaggtaccaaaatcgtgtaaactcggaggtaaactcaattattgcta 26201830  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  26201829 aaatcggaatgtttgac 26201813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 180
Target Start/End: Complemental strand, 4640015 - 4639908
Alignment:
Q  73 agcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctgg 172  Q
    ||||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||    
T  4640015 agcaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactctatttctgg 4639916  T
Q  173 taaaatcg 180  Q
    ||||||||    
T  4639915 taaaatcg 4639908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 179
Target Start/End: Original strand, 27148804 - 27148910
Alignment:
Q  73 agcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctgg 172  Q
    ||||||||||| |||||||||||||||||| |  || |||  ||||||||||||||||||| |||||||||||||| ||  |||||| |||| |||| |     
T  27148804 agcaatgttccacaaatcgagtgttaactcgcaaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaaatcggaggtaacctcaatttcagc 27148903  T
Q  173 taaaatc 179  Q
    |||||||    
T  27148904 taaaatc 27148910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 11735292 - 11735215
Alignment:
Q  112 actgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttg 189  Q
    |||||||||||| |||||||| ||||||||||||||||||  ||||||||||  ||||||||||||||| || |||||    
T  11735292 actgagtttacgattttaggtcccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaatgtttg 11735215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 224
Target Start/End: Complemental strand, 37915995 - 37915886
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaaaactcgataaattcg 214  Q
    |||||||||| ||||||| | |||| ||| |||||||| ||||||||||  ||| |||||||||||||  ||||||||||||||| ||||  |||| |||    
T  37915995 gagtttacgtgtttaggtgctaaaagcgttttaactcagaggtaaactcgatttatggtaaaatcgaacagtttgaccgagttaacactcagtaaactcg 37915896  T
Q  215 tgtaaaattg 224  Q
    ||| ||||||    
T  37915895 tgtgaaattg 37915886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 14741387 - 14741503
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  ||||| |||    
T  14741387 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 14741486  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  14741487 aaatcggaaagtttgac 14741503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 21486222 - 21486287
Alignment:
Q  185 gtttgaccgagttaaaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatctaa 250  Q
    |||||| |||||||| ||||| |||| ||||||||| | ||||||| |||||||||||||||||||    
T  21486222 gtttgatcgagttaacactcggtaaactcgtgtaaactcgaccgaaatttacgagtttacatctaa 21486287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 21024067 - 21024143
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||| ||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||||| || |||||||    
T  21024067 gagtttacgattttaggtgacaaaaacgtgttaactcgaaggtaaactcggtttttggtgaaatcggaaagtttgac 21024143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 14732393 - 14732318
Alignment:
Q  116 agtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||||||||||||  ||||| |||||||||||  |||||||||  |||| |||| |||||| || |||||||    
T  14732393 agtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaacttggtttttggtgaaatcggaaagtttgac 14732318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 30823108 - 30823158
Alignment:
Q  137 aaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtt 187  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||||||    
T  30823108 aaatcgtgttaactctgaggtaaactcggtttctagtaaaatcggaaggtt 30823158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 5772171 - 5772106
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgt 143  Q
    |||||| || |||||||||||  ||||  |||| ||||||||||||| |||||| |||||||||||||    
T  5772171 aatgtttcgtaaatcgagtgt--actcgtcgagtttactgagtttacatttttatgtaccaaaatcgt 5772106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 33497192 - 33497116
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||| |||||| ||| ||||||||||| |||||  ||||||||||  |||||| |||||| | || |||||||    
T  33497192 gagtttacatttttaagtatcaaaatcgtgtcaactcggaggtaaactcgatttctgataaaattggaatgtttgac 33497116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 47067167 - 47067195
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactct 103  Q
    |||||||||||||||||||||||||||||    
T  47067167 caatgttccgcaaatcgagtgttaactct 47067195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 12522646 - 12522531
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  12522646 aatgttccgcaaatcgagtgttaactctccgagtttactaagtttgcatttttaggtaccaaaatcgtgttaactcagaggtaaactcggtttctggtaa 12522547  T
Q  176 aatcgaaaggtttgac 191  Q
    ||||| ||||||||||    
T  12522546 aatcggaaggtttgac 12522531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 10295130 - 10295017
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| | ||||||||||||||  |||||||||| ||||||||||    
T  10295130 caatgttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaacaatcgtgttaactctgaggtaaactcggtttctggta 10295031  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  10295030 aaatcggaaggttt 10295017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 31625718 - 31625831
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||| ||||||||||  |||||||||| ||||||||||    
T  31625718 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggta 31625817  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  31625818 aaatcggaaggttt 31625831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 9288285 - 9288172
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  9288285 caatgttccgcaaatcgagtgttaactcttcgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 9288186  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  9288185 aaattggaaggttt 9288172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 19717665 - 19717552
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  19717665 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 19717566  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  19717565 aaattggaaggttt 19717552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 43166467 - 43166351
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| | | |||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||| | |||||||||||    
T  43166467 caatgttccgcaaatcgagtgttaatttttcgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaataagtttctggta 43166368  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||| ||||||||||||    
T  43166367 aaattgaaaggtttgac 43166351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 8029982 - 8029864
Alignment:
Q  73 agcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctgg 172  Q
    |||||||||||| |||||||||||||||||| |||| |||  |||||||||| ||||||||||||||||||||||||||  || |||||||  |||||||    
T  8029982 agcaatgttccgtaaatcgagtgttaactcttcgagtttatcgagtttacgtgtttaggtaccaaaatcgtgttaactctgagataaactcgatttctgg 8029883  T
Q  173 taaaatcgaaaggtttgac 191  Q
    |||||||| ||||||||||    
T  8029882 taaaatcggaaggtttgac 8029864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 18305767 - 18305654
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  18305767 caatgttacgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18305668  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  18305667 aaattggaaggttt 18305654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 18958518 - 18958405
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| |  ||||||||||    
T  18958518 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaattggtttctggta 18958419  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  18958418 aaattggaaggttt 18958405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 32497959 - 32498064
Alignment:
Q  83 cgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaa 182  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  |||||||||| |||||| ||||||||| |    
T  32497959 cgcaaattgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcgga 32498058  T
Q  183 aggttt 188  Q
    ||||||    
T  32498059 aggttt 32498064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 74 - 253
Target Start/End: Complemental strand, 6388266 - 6388074
Alignment:
Q  74 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 173  Q
    |||||||||||||||| ||||| |||||| ||||| |||  || |||| |||||||||||||||||||||||||||||  |||||||||| |||| ||||    
T  6388266 gcaatgttccgcaaattgagtggtaactcgccgagtttatcgaatttatgtttttaggtaccaaaatcgtgttaactcggaggtaaactctgtttatggt 6388167  T
Q  174 aaaatc-gaaag--------gtttgaccgagtta----aaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatctaaaaa 253  Q
    |||||| |||||        |||||||| |||||    | |||||||||| ||||||||| |||||||| ||||||||||||| |||||||||    
T  6388166 aaaatcggaaagtttgacaagtttgaccaagttaacgtacactcgataaactcgtgtaaacttgaccgagttttacgagtttaaatctaaaaa 6388074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 26856515 - 26856628
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||| | |||||||||||||||||||||||| |||| ||||||| |||| ||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  26856515 caatgttacacaaatcgagtgttaactctccgagattaccgagtttatgtttataggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 26856614  T
Q  175 aaatcgaaaggttt 188  Q
    |||||  |||||||    
T  26856615 aaatcagaaggttt 26856628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 42305395 - 42305282
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||  ||||||||||||||||  ||||||| || ||||||||||    
T  42305395 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacctttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggta 42305296  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  42305295 aaattggaaggttt 42305282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 16364116 - 16364229
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||  ||| |||  || ||||||||||||||||| ||||||||||||||||  ||||||| || |||||| |||    
T  16364116 caatgttccgcaaatcgagtgttaactctatgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctaaggtaaattcggtttctagta 16364215  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  16364216 aaatcggaaggttt 16364229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 220
Target Start/End: Original strand, 24082173 - 24082318
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||  ||||| ||||||||||||  |||| ||||| |||||| | |||||||||||||||| |||||||  |  ||||||| || ||||||||||    
T  24082173 caatgttctacaaattgagtgttaactcgacgagtttactaagtttatgattttaggtaccaaaattgtgttaatactgaggtaaattcggtttctggta 24082272  T
Q  175 aaatcgaaaggtttgaccgagttaaaactcgataaattcgtgtaaa 220  Q
    |||||||||||||||||| |||||| ||||| |||| |||| ||||    
T  24082273 aaatcgaaaggtttgaccaagttaacactcggtaaactcgtataaa 24082318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 39467309 - 39467196
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||| |||||||| |||||||  ||||||| |   |||||||||    
T  39467309 caatgttccgcaaatcgagtgttaactctccgagattaccgcgtttacgtttttaggtacaaaaatcgtattaactctaaggtaaaattgatttctggta 39467210  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  39467209 aaattggaaggttt 39467196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 43308296 - 43308186
Alignment:
Q  78 tgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaa 177  Q
    |||||||||||||||||||||||||| |||| |||  |||||| ||||||||||||||||||||||||||||||  |  |||| || |||||||||||||    
T  43308296 tgttccgcaaatcgagtgttaactcttcgagattatcgagtttgcgtttttaggtaccaaaatcgtgttaactctgatataaaatcggtttctggtaaaa 43308197  T
Q  178 tcgaaaggttt 188  Q
    | | |||||||    
T  43308196 ttggaaggttt 43308186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 14781923 - 14781810
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  ||||| || ||||||||||  ||||||||||||||||  ||||||| || ||||||||||    
T  14781923 caatgttccgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggta 14781824  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  14781823 aaattggaaggttt 14781810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 44725582 - 44725469
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||| ||| |||  ||| |||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  44725582 caatgttccgcaaatcgagtgttaaatctcagagattatcgagattacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 44725483  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  44725482 aaattggaaggttt 44725469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 41393958 - 41394033
Alignment:
Q  116 agtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||||||||||||| |||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  41393958 agtttacgtttttaggtatcaaaatcgtgttaattcggaggtaaactcagtttctgataaaatcgaaaggtttgac 41394033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 24067107 - 24067172
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcg 180  Q
    ||||||||||||||||||||||||||||||| |||||  |||| |||||| |||||||||||||||    
T  24067107 gagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtgaactcaatttctggtaaaatcg 24067172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 19484176 - 19484292
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||| ||||||| || ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  19484176 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 19484275  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  19484276 aaatcggaaagtttgac 19484292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 17234676 - 17234791
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    |||||||  |||||||| ||||||||| | ||| ||||  ||||| |||||||||||||||||||| | | |||||  ||||||||||  ||||||||||    
T  17234676 aatgttcaacaaatcgaatgttaactcgctgagtttaccaagtttgcgtttttaggtaccaaaatcctatcaactcggaggtaaactcgatttctggtaa 17234775  T
Q  176 aatcgaaaggtttgac 191  Q
    ||||| || |||||||    
T  17234776 aatcggaatgtttgac 17234791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 27878729 - 27878591
Alignment:
Q  120 tacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac---------cgagttaaaactcgataaa 210  Q
    ||||| ||||||||||||||||||||||||||  | ||||| || ||||||||||||||||  |||||||||          ||||||| ||||||| ||    
T  27878729 tacgtgtttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactcgatgaa 27878630  T
Q  211 ttcgtgtaaaattgaccgaattttacgagtttacatcta 249  Q
     ||||||||| | |||||| |||||| ||||||||||||    
T  27878629 ctcgtgtaaactcgaccgagttttacaagtttacatcta 27878591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 28018910 - 28018772
Alignment:
Q  120 tacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac---------cgagttaaaactcgataaa 210  Q
    ||||| ||||||||||||||||||||||||||  | ||||| || ||||||||||||||||  |||||||||          ||||||| ||||||| ||    
T  28018910 tacgtgtttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactcgatgaa 28018811  T
Q  211 ttcgtgtaaaattgaccgaattttacgagtttacatcta 249  Q
     ||||||||| | |||||| |||||| ||||||||||||    
T  28018810 ctcgtgtaaactcgaccgagttttacaagtttacatcta 28018772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 76 - 160
Target Start/End: Original strand, 7760770 - 7760854
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaa 160  Q
    |||||||| |||||||||||||||||   |||| ||||||||||||  |||||||||| ||||||||||| |||||  |||||||    
T  7760770 aatgttccacaaatcgagtgttaacttatcgagtttactgagtttatatttttaggtatcaaaatcgtgtcaactcgaaggtaaa 7760854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 7466759 - 7466834
Alignment:
Q  103 tccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaat 178  Q
    |||||| |||| ||||||| ||||||| |||| ||||||||||||||||  ||||||| |||||||||| ||||||    
T  7466759 tccgagattaccgagtttatgtttttaagtacaaaaatcgtgttaactctgaggtaaaatcagtttctgataaaat 7466834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 12522531 - 12522485
Alignment:
Q  105 cgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactc 151  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||    
T  12522531 cgagcttaccaagtttacgtttttaggtaccaaaatcgtgttaactc 12522485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 118 - 249
Target Start/End: Complemental strand, 27915675 - 27915535
Alignment:
Q  118 tttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaag---------gtttgaccgagttaaaactcgata 208  Q
    ||||||| |||| |||||||||||||||||||||| |  |||| ||  |||||| ||||||||  ||         ||||||||||||||| |||||||     
T  27915675 tttacgtgtttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacactcgatg 27915576  T
Q  209 aattcgtgtaaaattgaccgaattttacgagtttacatcta 249  Q
    || ||||||||| | |||||| |||||| ||||||||||||    
T  27915575 aactcgtgtaaactcgaccgagttttacaagtttacatcta 27915535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 118 - 249
Target Start/End: Complemental strand, 27962094 - 27961954
Alignment:
Q  118 tttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaag---------gtttgaccgagttaaaactcgata 208  Q
    ||||||| |||| |||||||||||||||||||||| |  |||| ||  |||||| ||||||||  ||         ||||||||||||||| |||||||     
T  27962094 tttacgtgtttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacactcgatg 27961995  T
Q  209 aattcgtgtaaaattgaccgaattttacgagtttacatcta 249  Q
    || ||||||||| | |||||| |||||| ||||||||||||    
T  27961994 aactcgtgtaaactcgaccgagttttacaagtttacatcta 27961954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 37131386 - 37131322
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatc 179  Q
    |||||||| |||||||||||||||||||||| |||||  ||||||||||   |||||||||||||    
T  37131386 gagtttacatttttaggtaccaaaatcgtgtcaactcggaggtaaactcgacttctggtaaaatc 37131322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 26620445 - 26620369
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||  ||||||| || | ||||||||||||||    |||||| |||||||||| ||||||||||| |||||||    
T  26620445 gagtttatatttttagatatcgaaatcgtgttaacttggtggtaaattcagtttctgataaaatcgaaaagtttgac 26620369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 8e-40; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 5494887 - 5494772
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  5494887 caatgttccgcaaattgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctggta 5494788  T
Q  175 aaatcgaaaggtttga 190  Q
    |||||  |||||||||    
T  5494787 aaatcagaaggtttga 5494772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 45272976 - 45273092
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| ||||| ||||||||||  |||||||||| ||||||||||    
T  45272976 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggta 45273075  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| ||||||||||    
T  45273076 aaatcggaaggtttgac 45273092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 46328395 - 46328508
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||| ||    
T  46328395 caatgttccgcaaatcgagtgttaattctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctgtta 46328494  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  46328495 aaatcggaaggttt 46328508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 75 - 219
Target Start/End: Complemental strand, 9322297 - 9322153
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||| |||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  9322297 caatgttccgtaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 9322198  T
Q  175 aaatcgaaaggtttgaccgagttaaaactcgataaattcgtgtaa 219  Q
    |||| | |||||||||| ||||||| ||||| |||| ||||||||    
T  9322197 aaattggaaggtttgactgagttaacactcggtaaactcgtgtaa 9322153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 74 - 249
Target Start/End: Complemental strand, 47371715 - 47371531
Alignment:
Q  74 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 173  Q
    |||||||| |||||||||||||||||| ||| ||| |||  ||||||||||  |||||||||||||||||||||||||  ||||||||||  ||||||||    
T  47371715 gcaatgtttcgcaaatcgagtgttaacactctgagtttatcgagtttacgtacttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggt 47371616  T
Q  174 aaaatcgaaag---------gtttgaccgagttaaaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatcta 249  Q
    ||||||| |||         ||||||||||||||| ||||| |||| ||||||||| | |||||| |||||||||||||||||||    
T  47371615 aaaatcggaaggtttgccgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagttttacgagtttacatcta 47371531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 3583694 - 3583579
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| | | |||||||| |||||| ||||    
T  3583694 aatgttccgcaaatcgagtgttaactctccgagtttaccgagtttacgtttttaggtaccgaaatcgtgttaacttagaagtaaactcggtttctagtaa 3583595  T
Q  176 aatcgaaaggtttgac 191  Q
    ||||| || |||||||    
T  3583594 aatcggaaagtttgac 3583579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 8141022 - 8140919
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||||||||||||  ||||||| ||  |||||||||    
T  8141022 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggta 8140923  T
Q  175 aaat 178  Q
    ||||    
T  8140922 aaat 8140919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 28404084 - 28403969
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    |||||||||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||||||||||||||   ||||||| || ||||||  |||    
T  28404084 aatgttccgcaaatcgagtgttaactcttcgaatttactgagtttacatttttaggtaccaaaatcgtgttaacttgaaggtaaattcggtttctaataa 28403985  T
Q  176 aatcgaaaggtttgac 191  Q
    |||||||| |||||||    
T  28403984 aatcgaaatgtttgac 28403969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 6312985 - 6313098
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  6312985 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 6313084  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  6313085 aaattggaaggttt 6313098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 15834823 - 15834710
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| ||  ||| |||||    
T  15834823 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggta 15834724  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  15834723 aaattggaaggttt 15834710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 25612501 - 25612614
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  25612501 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 25612600  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  25612601 aaattggaaggttt 25612614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 29396223 - 29396110
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  29396223 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 29396124  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  29396123 aaattggaaggttt 29396110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 48966630 - 48966514
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||  |||||||||   |||||| |     
T  48966630 caatgttccgcaaatcgagggttaactcttcgagtttactgagtttacgtgtttaggtaccaaaatcgtgttaactctgaggtaaacttgatttctgatg 48966531  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||| | ||||||||||    
T  48966530 aaattggaaggtttgac 48966514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 38535935 - 38535830
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||| |||||||||| || |||| |||||||||||||||| ||| ||||| ||||||||||  |||||||||  ||||||||||    
T  38535935 caatgttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggta 38535836  T
Q  175 aaatcg 180  Q
    ||||||    
T  38535835 aaatcg 38535830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 38558153 - 38558048
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||| |||||||||| || |||| |||||||||||||||| ||| ||||| ||||||||||  |||||||||  ||||||||||    
T  38558153 caatgttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggta 38558054  T
Q  175 aaatcg 180  Q
    ||||||    
T  38558053 aaatcg 38558048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 51702004 - 51702117
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||| ||||||||||  ||||||| || ||||||||||    
T  51702004 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaaatcggtttctggta 51702103  T
Q  175 aaatcgaaaggttt 188  Q
    ||||  ||||||||    
T  51702104 aaattaaaaggttt 51702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 25831038 - 25830962
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactc 151  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  25831038 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactc 25830962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 49971734 - 49971627
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    |||||||| |||||||| ||||||||  | ||| |||| ||||||||||||||||||||||||||||||| |||||  ||||||||||  ||||||||||    
T  49971734 aatgttccacaaatcgaatgttaacttactgagtttaccgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgttttctggtaa 49971635  T
Q  176 aatcgaaa 183  Q
    ||||||||    
T  49971634 aatcgaaa 49971627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 48177232 - 48177118
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcag-tttctggt 173  Q
    ||||||| |||||||||||| ||||||||| ||| ||||||||||||||||||||||||  ||||||||||||||||  ||||||| || | ||||||||    
T  48177232 caatgtttcgcaaatcgagtattaactctctgagattactgagtttacgtttttaggtagaaaaatcgtgttaactctgaggtaaaatcggttttctggt 48177133  T
Q  174 aaaatcgaaaggttt 188  Q
    ||||| | |||||||    
T  48177132 aaaattggaaggttt 48177118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 49453200 - 49453083
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtacc-aaaatcgtgttaactcataggtaaactcagtttctggt 173  Q
    ||||||||||||||||||||||||||| |||||| ||||  |||||| || |||||||||| ||||||||||||||||  ||||||||||  |||||||     
T  49453200 caatgttccgcaaatcgagtgttaactgtccgagtttacctagtttatgtgtttaggtaccaaaaatcgtgttaactctgaggtaaactcgatttctgga 49453101  T
Q  174 aaaatcgaaaggtttgac 191  Q
    ||||||  ||||||||||    
T  49453100 aaaatcataaggtttgac 49453083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 72 - 191
Target Start/End: Complemental strand, 49237108 - 49236989
Alignment:
Q  72 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 171  Q
    ||||||||||||| ||||||||||||||  || |||| |||  ||||||| || |||||||||||||| |||||||| ||  || ||| ||| |||||||    
T  49237108 aagcaatgttccgtaaatcgagtgttaatacttcgagtttatcgagtttatgtgtttaggtaccaaaaccgtgttaattcggagttaagctcggtttctg 49237009  T
Q  172 gtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||||    
T  49237008 gtaaaatcgaaaggtttgac 49236989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 180
Target Start/End: Complemental strand, 32760230 - 32760133
Alignment:
Q  74 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 173  Q
    ||||||||||||||||||||||||||| |||         ||||||||||||||||||||||||||||||||||||||  |||||||||| |||||| ||    
T  32760230 gcaatgttccgcaaatcgagtgttaacactc---------tgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctagt 32760140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 52182305 - 52182424
Alignment:
Q  72 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 171  Q
    ||||| |||| | |||||||||||||||||| ||||| |||  ||||||||||||||||||||  ||||||||| || ||  ||||||| ||  ||||||    
T  52182305 aagcactgtttcacaaatcgagtgttaactcgccgagtttatcgagtttacgtttttaggtactgaaatcgtgtcaattcggaggtaaattcgatttctg 52182404  T
Q  172 gtaaaatcgaaaggtttgac 191  Q
    |||||||||||| |||||||    
T  52182405 gtaaaatcgaaatgtttgac 52182424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 18798866 - 18798974
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||| |||||| |||||||||||     ||| |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  18798866 caatgttccgcagatcgagcgttaactctcc-----taccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18798960  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  18798961 aaattggaaggttt 18798974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 25253486 - 25253591
Alignment:
Q  86 aaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaagg 185  Q
    |||||||||||||| |||| ||| |||| ||||||| ||||||||||||||||||||||||||  |  ||||||| || |||||||||||| ||| |||     
T  25253486 aaatcgagtgttaattctctgagtttaccgagtttatgtttttaggtaccaaaatcgtgttaatactgaggtaaattcggtttctggtaaactcggaaga 25253585  T
Q  186 tttgac 191  Q
    ||||||    
T  25253586 tttgac 25253591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 35177350 - 35177233
Alignment:
Q  75 caatgttccgcaaatcgagtgtt-aactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 173  Q
    ||||| ||||||||||||||||| ||| ||||||| |||   | |||| |||||||||||||||||||||||||| ||| ||||||||||  |||||| |    
T  35177350 caatggtccgcaaatcgagtgtttaacactccgagtttatcaaatttatgtttttaggtaccaaaatcgtgttaattcagaggtaaactcgatttctgat 35177251  T
Q  174 aaaatcgaaaggtttgac 191  Q
    ||||||| |||| |||||    
T  35177250 aaaatcggaaggattgac 35177233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 4005049 - 4005165
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  4005049 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 4005148  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  4005149 aaatcggaaagtttgac 4005165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 179
Target Start/End: Complemental strand, 5209507 - 5209403
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||| ||| ||| |||  |  ||||||| ||||||||||||||||||||||||||  |||| |||||  ||||||||     
T  5209507 caatgttccgcaaatcgagtgttaacactctgagtttatcgtttttacgtgtttaggtaccaaaatcgtgttaactcggaggtcaactcgatttctggtg 5209408  T
Q  175 aaatc 179  Q
    |||||    
T  5209407 aaatc 5209403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 26757597 - 26757713
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| || ||||||||| ||||||||||  |||||||||    
T  26757597 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgagttaactcagaggtaaactcgatttctggta 26757696  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  26757697 aaatcggaaagtttgac 26757713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 86 - 191
Target Start/End: Complemental strand, 27257986 - 27257881
Alignment:
Q  86 aaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaagg 185  Q
    ||||| ||||||||||| ||||| ||| ||| |||||||||||||||||||||||||||| |||||  |||||||||   |||  |||||||||| || |    
T  27257986 aaatctagtgttaactcgccgagtttaatgaatttacgtttttaggtaccaaaatcgtgtcaactccgaggtaaacttgattttcggtaaaatcggaatg 27257887  T
Q  186 tttgac 191  Q
    ||||||    
T  27257886 tttgac 27257881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 49231456 - 49231529
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggttt 188  Q
    ||||||| |||||||||||| ||||||||||||||||  |||||||||| |||||||||| ||||| |||||||    
T  49231456 gagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtataatcggaaggttt 49231529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 1243445 - 1243329
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| ||||  ||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  1243445 caatgttccacaaatcgcgtgtcaactcggcgagtttacctagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 1243346  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  1243345 aaatcggaaagtttgac 1243329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 8147299 - 8147415
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  8147299 caatgttccacaaatcgcgtgtcaactcagcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 8147398  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||| | || |||||||    
T  8147399 aaattgcaaagtttgac 8147415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 179
Target Start/End: Original strand, 9192006 - 9192110
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  9192006 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 9192105  T
Q  175 aaatc 179  Q
    |||||    
T  9192106 aaatc 9192110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 41353403 - 41353519
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||| ||||||| || ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  41353403 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 41353502  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  41353503 aaatcggaaagtttgac 41353519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 51106874 - 51106990
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||| ||||||  |||||||||    
T  51106874 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggaaaactcgatttctggta 51106973  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  51106974 aaatcggaaagtttgac 51106990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 28387206 - 28387141
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaat 140  Q
    ||||||||||||||||| |||||||||||||||| |||| |||||||| |||||| |||| |||||    
T  28387206 caatgttccgcaaatcgtgtgttaactctccgagattaccgagtttacatttttatgtacaaaaat 28387141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 3593237 - 3593344
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||         |||||||  |||||||||| |||||||||||||||||  ||||||| ||  |||||  ||    
T  3593237 caatgttccgcaaatcgagtgttaactctcc---------gagtttatatttttaggtatcaaaatcgtgttaactcggaggtaaattcgatttctaata 3593327  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| ||||||||||    
T  3593328 aaatcggaaggtttgac 3593344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 18954487 - 18954571
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaa 199  Q
    ||||||||||||||||||  ||||| |||||||||||  | |||||||| |||| |||| |||||| || |||||||||||||||    
T  18954487 gagtttacgtttttaggtggcaaaaacgtgttaactcggacgtaaactcggtttttggtgaaatcggaaagtttgaccgagttaa 18954571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 7798522 - 7798598
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||||| || |||||||    
T  7798522 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 7798598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 1108372 - 1108450
Alignment:
Q  113 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||||   |||| ||||| |||||  |||||||||| |||| |||| |||||| || |||||||    
T  1108372 ctgagtttacgtttttaggtggtaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 1108450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 33886953 - 33886883
Alignment:
Q  121 acgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||||| || |||||||    
T  33886953 acgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 33886883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 33957297 - 33957367
Alignment:
Q  121 acgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||||| || |||||||    
T  33957297 acgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 33957367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 2293475 - 2293411
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatc 179  Q
    ||||||||||| |||||| |||||||||||| |||||  ||||| ||||| ||| || |||||||    
T  2293475 gagtttacgttgttaggtgccaaaatcgtgtaaactcgaaggtagactcattttttgataaaatc 2293411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 8122211 - 8122294
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaa 199  Q
    |||||||||||||||  |||||||||||||| |||||  |  |||||||  ||| ||||||||| |||| | |||||||||||||    
T  8122211 gagtttacgtttttaaataccaaaatcgtgtaaactcgaacttaaactcgttttttggtaaaattgaaaag-ttgaccgagttaa 8122294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 11579199 - 11579123
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||||| ||||||| | |||| |||||||||||  ||||||| |   ||||||||||||||| || |||||||    
T  11579199 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaatttgatttctggtaaaatcggaaagtttgac 11579123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 42304586 - 42304526
Alignment:
Q  128 taggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggttt 188  Q
    ||||| |||||||| |||||| ||  |||||||||| |||||||||||||| | |||||||    
T  42304586 taggtgccaaaatcatgttaattcggaggtaaactcggtttctggtaaaattggaaggttt 42304526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 49501324 - 49501211
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  49501324 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49501225  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  49501224 aaatcggaaggttt 49501211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 49507389 - 49507276
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  49507389 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49507290  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  49507289 aaatcggaaggttt 49507276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 32889851 - 32889973
Alignment:
Q  69 tcaaagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagttt 168  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||||||| |||||||||||||||||||||||||   | ||||||||| |||    
T  32889851 tcaaagcaatgttccgcaaatcgagtgttaactctccgaatttaccgagtttacgtgtttaggtaccaaaatcgtgttaactttgatgtaaactcaattt 32889950  T
Q  169 ctggtaaaatcgaaaggtttgac 191  Q
    |||||||||||  ||||||||||    
T  32889951 ctggtaaaatcagaaggtttgac 32889973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 32322476 - 32322586
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||| ||  |||||||||| ||||||||||    
T  32322476 caatgttccgcaagtcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcggtttctggta 32322575  T
Q  175 aaatcgaaagg 185  Q
    |||||| ||||    
T  32322576 aaatcggaagg 32322586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 29510208 - 29510092
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||| |||||||| |||||||||||||||||  | ||||||||| |||||||||    
T  29510208 caatgttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtgtttaggtatcaaaatcgtgttaactctgatgtaaactcaatttctggta 29510109  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||  ||||||||||    
T  29510108 aaatcagaaggtttgac 29510092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 30967134 - 30967021
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  || |||| |  ||||||||||    
T  30967134 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgagataaaattggtttctggta 30967035  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  30967034 aaattggaaggttt 30967021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 5800374 - 5800487
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  5800374 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttctggta 5800473  T
Q  175 aaatcgaaaggttt 188  Q
    | |||  |||||||    
T  5800474 acatcagaaggttt 5800487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 23987607 - 23987719
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||| |  ||||||||||    
T  23987607 caatgttccgcaaatcgagtgttacctctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaa-ttggtttctggta 23987705  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  23987706 aaattggaaggttt 23987719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 27768474 - 27768587
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  27768474 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 27768573  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  27768574 aaattggaaggttt 27768587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 28484306 - 28484419
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaa-tcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||| |||| ||||||||||||  |||||||||| ||||||||||    
T  28484306 aatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaagtcgtgttaactctgaggtaaactcggtttctggta 28484405  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  28484406 aaattggaaggttt 28484419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 41725523 - 41725636
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||  |||||||||||||||||||||| | ||||  ||||||||||||||||||| ||||||||||||||||  ||||||||||  |||||||||    
T  41725523 caatgttcttcaaatcgagtgttaactctccgtgattacctagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggta 41725622  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  41725623 aaatcggaaggttt 41725636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 49834625 - 49834512
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||| |||| ||||||||||||||  || |||| |||||||||||||||| ||| ||||||||||||||||  |||||||||| ||||||||||    
T  49834625 caatgttccgtaaattgagtgttaactctctaagattaccgagtttacgtttttagctacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49834526  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  49834525 aaatcggaaggttt 49834512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 50018602 - 50018715
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||| ||||||||||| |||||| |||||||||  ||||||| || ||||||||||    
T  50018602 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggta 50018701  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  50018702 aaattggaaggttt 50018715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 54341552 - 54341665
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| |||||||||| |||||  ||||||| || ||||||||||    
T  54341552 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgtaaactctgaggtaaaatcggtttctggta 54341651  T
Q  175 aaatcgaaaggttt 188  Q
    |||| |||||||||    
T  54341652 aaattgaaaggttt 54341665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 33138771 - 33138885
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    |||||||||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||  ||||||||||  ||||||||||    
T  33138771 aatgttccgcaaatcgagtgttaactctccgag---------tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtaa 33138861  T
Q  176 aatcgaaaggtttgaccgagttaa 199  Q
    ||||| |||||||||| |||||||    
T  33138862 aatcggaaggtttgactgagttaa 33138885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 48261488 - 48261601
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  ||||| || ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  48261488 caatgttccgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 48261587  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  48261588 aaattggaaggttt 48261601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 51321266 - 51321379
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||  |||  |||||||| ||||||||||| ||||||||||||||||  | ||||| || ||||||||||    
T  51321266 caatgttccgcaaatcgagtgttaactctccgatattatcgagtttacatttttaggtacaaaaatcgtgttaactctgacgtaaaatcggtttctggta 51321365  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  51321366 aaattggaaggttt 51321379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 23671516 - 23671400
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||| | ||| ||| |||| |  ||||||| ||||||||||||||||||||||||||  ||||||||||  ||||||||     
T  23671516 caatgttccgcaaatcgagtgttagcactctgagtttaccggttttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtg 23671417  T
Q  175 aaatcgaaaggtttgac 191  Q
    ||||||||| |||||||    
T  23671416 aaatcgaaaagtttgac 23671400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 5441812 - 5441925
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||| ||||||| |||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  5441812 caatgttccgtaaatcgaatgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 5441911  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  5441912 aaattggaaggttt 5441925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 29855926 - 29856039
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||  ||||||||| |||| |||||||| |||| ||||||||||||||| |||| ||||||||||||||||  ||||||||||  |||||||||    
T  29855926 caatgttccataaatcgagtattaattctccgagattaccgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcgatttctggta 29856025  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  29856026 aaattggaaggttt 29856039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 37828221 - 37828108
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||| |||||| |||||||| |||  |||||||| ||||||| ||| ||||||||||||||||  ||||||| || ||||||||||    
T  37828221 caatgttccgcaaatcgaatgttaaatctccgagattatcgagtttacatttttagatacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 37828122  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  37828121 aaattggaaggttt 37828108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 54853267 - 54853164
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||| |||||| |||| ||||| ||||||||||  ||||||| || |||||| |||    
T  54853267 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacctttttatgtacaaaaattgtgttaactctgaggtaaaatcggtttctcgta 54853168  T
Q  175 aaat 178  Q
    ||||    
T  54853167 aaat 54853164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 871782 - 871886
Alignment:
Q  86 aaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaagg 185  Q
    |||||||||||||||||  |||| |||| ||||||||||||||||||||| ||||||||| |||||  ||||||||||  ||||||||||||||| || |    
T  871782 aaatcgagtgttaactcgtcgagtttaccgagtttacgtttttaggtacc-aaatcgtgtcaactcggaggtaaactcgatttctggtaaaatcggaatg 871880  T
Q  186 tttgac 191  Q
    ||||||    
T  871881 tttgac 871886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 46286678 - 46286786
Alignment:
Q  74 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 173  Q
    |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||| |  ||||||||||  ||||| ||    
T  46286678 gcaatgttccgcaaatcgagtgttaactctccgag---------tttacgtttttaggtaccaaaatcgtgttaacactaaggtaaactcgatttctagt 46286768  T
Q  174 aaaatcgaaaggtttgac 191  Q
    ||| ||| ||||||||||    
T  46286769 aaactcggaaggtttgac 46286786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 50517163 - 50517270
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||||   ||||||||||  |||||||||    
T  50517163 caatgttccgcaaatcgagtgttaactctccgag---------tttacgtgtttaggtaccaaaatcgtgttaactttgaggtaaactcgatttctggta 50517253  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||| | ||||||||||    
T  50517254 aaattggaaggtttgac 50517270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 179
Target Start/End: Original strand, 55165486 - 55165590
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||||||| ||||||  |||| |||||||||||||||||||| ||||||||||||| ||||||   |||||||||   ||| |||||    
T  55165486 caatgttccacaaatcgagtgctaactcgtcgagtttactgagtttacgtttttacgtaccaaaatcgtattaacttggaggtaaacttgatttatggta 55165585  T
Q  175 aaatc 179  Q
    |||||    
T  55165586 aaatc 55165590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 26491227 - 26491149
Alignment:
Q  113 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||||||| ||||||||||||||||||||||| |   |||||||||| |||||||||||||||  ||||||||||    
T  26491227 ctgagtttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaactcggtttctggtaaaatcagaaggtttgac 26491149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 32683818 - 32683746
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaa 148  Q
    ||||||||| |||||||||||||||||||| ||| |||| ||| |||||||||||||||| |||||||||||||    
T  32683818 caatgttccacaaatcgagtgttaactctcagagattaccgag-ttacgtttttaggtacaaaaatcgtgttaa 32683746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 37916211 - 37916287
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactc 151  Q
    ||||||||||||||| |||||||||||||||||| |||  |||||||| |||||| |||| ||||| ||||||||||    
T  37916211 caatgttccgcaaattgagtgttaactctccgagattatcgagtttacatttttatgtacaaaaattgtgttaactc 37916287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 29469121 - 29469240
Alignment:
Q  72 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 171  Q
    |||||||||| | ||||||| |||| || ||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  ||||||    
T  29469121 aagcaatgtttcacaaatcgcgtgtcaattcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctg 29469220  T
Q  172 gtaaaatcgaaaggtttgac 191  Q
    ||||||||| || |||||||    
T  29469221 gtaaaatcggaaagtttgac 29469240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 24966651 - 24966547
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    |||||| ||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||  | ||||| || |||| ||||||    
T  24966651 aatgtttcgcaaatcgagtgttaactctccgag---------tttacgtgtttaggtaccaaaatcgtgttaactcggaagtaaattcggtttttggtaa 24966561  T
Q  176 aatcgaaaggtttg 189  Q
    ||| | ||||||||    
T  24966560 aatgggaaggtttg 24966547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 8084170 - 8084286
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| |||| || |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  ||||| |||    
T  8084170 caatgttccacaaaccgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 8084269  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  8084270 aaatcggaaagtttgac 8084286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 51967278 - 51967354
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| ||||||||| |||||||    
T  51967278 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcgaaaagtttgac 51967354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 42937514 - 42937437
Alignment:
Q  114 tgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||| ||||||| | |||| ||| |||||||  ||||||||||  |||||||||||||||||| |||||||    
T  42937514 tgagtttacgtatttaggtgctaaaagcgttttaactcggaggtaaactcgatttctggtaaaatcgaaaagtttgac 42937437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 41470424 - 41470344
Alignment:
Q  119 ttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaa 199  Q
    ||||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||| | || |||||||||||||||    
T  41470424 ttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaattggaaagtttgaccgagttaa 41470344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 46863017 - 46862941
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||||| ||||||||| ||||| |||||||||   | ||||| ||  ||||||||||||||||||||||||||    
T  46863017 gagtttacgtgtttaggtactaaaattgtgttaactatgaagtaaattcgatttctggtaaaatcgaaaggtttgac 46862941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 6487420 - 6487344
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||  ||||| |||||||||||  ||||||||||  ||| |||| |||||| || |||||||    
T  6487420 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 6487344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 40487763 - 40487703
Alignment:
Q  113 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 173  Q
    ||||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| ||||    
T  40487763 ctgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggt 40487703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 56424077 - 56424002
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttga 190  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| | || |||||| || ||||||    
T  56424077 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttagtgaaatcggaaagtttga 56424002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 2326765 - 2326680
Alignment:
Q  113 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaa 199  Q
    |||| |||||||||||||||||||||||||||| ||||   | |||||||   ||||| ||||||| |||| | |||||||||||||    
T  2326765 ctgaatttacgtttttaggtaccaaaatcgtgtaaacttggatgtaaacttgttttctagtaaaattgaaaag-ttgaccgagttaa 2326680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 12754489 - 12754526
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttac 113  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  12754489 aatgttccgcaaatcgagtgttaactcgccgagtttac 12754526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 12754539 - 12754592
Alignment:
Q  157 taaactcagtttctggtaaaatcgaaaggtttgaccgagttaaaactcgataaa 210  Q
    ||||||| |||||||||||||||  || ||||||||||||||| ||||| ||||    
T  12754539 taaactctgtttctggtaaaatcagaaagtttgaccgagttaacactcggtaaa 12754592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 14334395 - 14334460
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcg 180  Q
    |||||||||||||||||||||||||||| || |||||  | |||||||   ||| |||||||||||    
T  14334395 gagtttacgtttttaggtaccaaaatcgcgtaaactcggacgtaaacttgttttttggtaaaatcg 14334460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 39419 - 39311
Alignment:
Q  83 cgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaa 182  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |  |||| ||||| ||||||||||||||||||    
T  39419 cgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaaccctgaggtcaactcggtttctggtaaaatcgaa 39320  T
Q  183 aggtttgac 191  Q
    |||||||||    
T  39319 aggtttgac 39311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 1047 - 929
Alignment:
Q  72 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 171  Q
    ||||||||||||||||||||||||||||| ||| ||| |||| |||||||||| ||||||||||||||||||||||||||  |||||||||| |||||||    
T  1047 aagcaatgttccgcaaatcgagtgttaacactctgagtttaccgagtttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcggtttctg 948  T
Q  172 gtaaaatcgaaaggtttga 190  Q
    ||||||||| || ||||||    
T  947 gtaaaatcggaaagtttga 929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 57856 - 57743
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  |||||||||| |||||| |||    
T  57856 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 57757  T
Q  175 aaatcgaaaggttt 188  Q
    |||||  |||||||    
T  57756 aaatcagaaggttt 57743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 52810766 - 52810879
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| ||||||||||  |||||||||| | ||||||||    
T  52810766 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcgggttctggta 52810865  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  52810866 aaatcggaaggttt 52810879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 20833310 - 20833418
Alignment:
Q  80 ttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatc 179  Q
    ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  20833310 ttccgcaaatcgagtgttaactctctgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggtaaaatc 20833409  T
Q  180 gaaaggttt 188  Q
    | |||||||    
T  20833410 ggaaggttt 20833418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 21386624 - 21386508
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||| |||||||||| |||||||||||||||| | ||||||||||  |||||||||    
T  21386624 caatgttccccaaatcgagtgttaactctccgagtttaccgagtttacatttttaggtatcaaaatcgtgttaacttagaggtaaactcgatttctggta 21386525  T
Q  175 aaatcgaaaggtttgac 191  Q
    ||||||||| |||||||    
T  21386524 aaatcgaaaagtttgac 21386508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 75 - 229
Target Start/End: Original strand, 48379558 - 48379721
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||| ||  ||||||||||  |||||||||    
T  48379558 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcgatttctggta 48379657  T
Q  175 aaatcgaaag---------gtttgaccgagttaaaactcgataaattcgtgtaaaattgaccga 229  Q
    |||||| |||         ||||||| ||||||| ||||| |||| ||||||||| ||||||||    
T  48379658 aaatcggaaggcttaacgagtttgactgagttaacactcggtaaactcgtgtaaacttgaccga 48379721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 37455255 - 37455368
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  37455255 caatgttccgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 37455354  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  37455355 aaattggaaggttt 37455368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 52617764 - 52617651
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||| ||| |||  || ||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  52617764 caatgttccgcaaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 52617665  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  52617664 aaatcggaaggttt 52617651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 17946638 - 17946749
Alignment:
Q  77 atgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaa 176  Q
    ||||||||||||||||||||||| |||||||| |||  |||||||||||||||||||| |||||| |||||||||  |||||||||| ||||||||||||    
T  17946638 atgttccgcaaatcgagtgttaattctccgagattatcgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggtaaa 17946737  T
Q  177 atcgaaaggttt 188  Q
    |||| |||||||    
T  17946738 atcggaaggttt 17946749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 75 - 178
Target Start/End: Original strand, 18750051 - 18750154
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||| |||||||||  |||||||||| ||||||||||    
T  18750051 caatgttccgcaaatcgagtgttaactctctgatattactgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggta 18750150  T
Q  175 aaat 178  Q
    ||||    
T  18750151 aaat 18750154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 7437710 - 7437600
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||| |  || ||||||| |||| ||||||    
T  7437710 aatgttccgcaaatcgagtgttaactctccgagtttactgagtttacttgtttaggtaccaaaatcgtgttaacacggagataaactcggtttttggtaa 7437611  T
Q  176 aatcgaaaggt 186  Q
    ||||| |||||    
T  7437610 aatcggaaggt 7437600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 31646053 - 31645940
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  31646053 caatgtttcgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 31645954  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  31645953 aaattggaaggttt 31645940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 51737479 - 51737366
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||| ||| |||  |||||||| ||||||||||| ||||||||||||||||  |||||||||| |||||| |||    
T  51737479 caatgttccgcaaatcgagtgttaactctctgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 51737380  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  51737379 aaatcggaaggttt 51737366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 54629259 - 54629372
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||||||  |||||| ||    
T  54629259 caatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctgata 54629358  T
Q  175 aaatcgaaaggttt 188  Q
    ||| ||||||||||    
T  54629359 aaagcgaaaggttt 54629372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 75 - 179
Target Start/End: Complemental strand, 44905647 - 44905543
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| ||||||||||||| ||  |||||| ||| ||||||||||    
T  44905647 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgttcttaggtacaaaaatcgtgttaattctgaggtaatctcggtttctggta 44905548  T
Q  175 aaatc 179  Q
    |||||    
T  44905547 aaatc 44905543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 23753181 - 23753068
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| || |||| |||||    
T  23753181 caatgtttcgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttttggta 23753082  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  23753081 aaattggaaggttt 23753068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 26107737 - 26107850
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||| |||||||||||| |||  |||||||||||||||||||| |||||| |||||||||  ||||||||||  |||||||||    
T  26107737 caatgttccgcaaatcgagtgataactctccgagattaacgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcgatttctggta 26107836  T
Q  175 aaatcgaaaggttt 188  Q
     ||||| |||||||    
T  26107837 caatcggaaggttt 26107850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 39038498 - 39038611
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| |||||||||||||||||||| ||| |||  || ||||||||||||||||| ||||| ||||||||||  |||||||||| ||||||||||    
T  39038498 caatgttccacaaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatggtgttaactctgaggtaaactcggtttctggta 39038597  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  39038598 aaatcggaaggttt 39038611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 84 - 258
Target Start/End: Original strand, 33693226 - 33693409
Alignment:
Q  84 gcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaa 183  Q
    ||||||||| ||||||||||||||| |||| ||||||| | |||||  |||||||||||||||||||   ||||||||||  ||||||||||||||  ||    
T  33693226 gcaaatcgaatgttaactctccgagtttaccgagtttatgattttacataccaaaatcgtgttaacttggaggtaaactcgatttctggtaaaatcagaa 33693325  T
Q  184 g---------gtttgaccgagttaaaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatctaaaaatataa 258  Q
    |         ||||||||||||||| ||||| |||| ||||||||| | |||||| ||||||| ||||||||||||||| ||||    
T  33693326 ggtttgacgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagttttacgtgtttacatctaaaaagataa 33693409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 40897539 - 40897652
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||| ||||||||||||||||||||| |||| || |||||| |||||||||| ||||||||||||||||  ||||||| || ||||||| ||    
T  40897539 caatgttccgcagatcgagtgttaactctccgagattaccgaatttacgattttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgata 40897638  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  40897639 aaattggaaggttt 40897652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 50761892 - 50761807
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaa 160  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  |||||||    
T  50761892 caatgttcagcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaa 50761807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 50903101 - 50902988
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||| ||||| ||||||||||||||||||||  ||  ||||||||||||||| |||| ||||||||||||||||  |||||||||| ||||||||||    
T  50903101 caatgtttcgcaagtcgagtgttaactctccgagaatatcgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 50903002  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  50903001 aaattggaaggttt 50902988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 16155168 - 16155318
Alignment:
Q  118 tttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaag---------gtttgaccgagttaaaactcgata 208  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| |||| || |||||| | |||         ||||||||||||||| ||||  ||    
T  16155168 tttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttttgataaaattggaaggtttgacgagtttgaccgagttaacactcagta 16155267  T
Q  209 aattcgtgtaaaattgaccgaattttacgagtttacatctaaaaatataat 259  Q
    || ||||||||| | |||||| ||||||||||||||||||||||| |||||    
T  16155268 aactcgtgtaaactcgaccgagttttacgagtttacatctaaaaaaataat 16155318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 43172889 - 43173003
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    ||||||||||||||||| ||||||||||   || |||  ||||||| || ||||||||||||||||||||| ||||  ||||||||||  ||||||||||    
T  43172889 aatgttccgcaaatcgaatgttaactctttaagtttatcgagtttatgtgtttaggtaccaaaatcgtgttgactcggaggtaaactcgatttctggtaa 43172988  T
Q  176 aatcgaaaggtttga 190  Q
    |||||||||||||||    
T  43172989 aatcgaaaggtttga 43173003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 4962872 - 4962755
Alignment:
Q  74 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 173  Q
    |||||||||||||||| ||| ||||||||||  || |||  ||||||||||||||||||| ||||||||||||||||   ||||||||||  ||||  ||    
T  4962872 gcaatgttccgcaaattgagcgttaactctctaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaacttggaggtaaactcgatttcaagt 4962773  T
Q  174 aaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||    
T  4962772 aaaatcgaaaggtttgac 4962755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 180
Target Start/End: Original strand, 7665552 - 7665657
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| |||||||||||||||||| ||||  ||||  ||||||||||||||| ||||||||||||||||||||  ||||||||||  ||| |||||    
T  7665552 caatgttccacaaatcgagtgttaactcgccgaatttacctagtttacgtttttagctaccaaaatcgtgttaactcggaggtaaactcgatttttggta 7665651  T
Q  175 aaatcg 180  Q
    ||||||    
T  7665652 aaatcg 7665657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 191
Target Start/End: Complemental strand, 45602545 - 45602441
Alignment:
Q  87 aatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggt 186  Q
    |||||||||||||||| ||||| |||| || ||||||||||| ||||  ||||| |||| ||||| |||||||||||| |||||||||||||||||| ||    
T  45602545 aatcgagtgttaactcgccgagtttaccgaatttacgtttttgggtattaaaattgtgtcaactcgtaggtaaactcaatttctggtaaaatcgaaatgt 45602446  T
Q  187 ttgac 191  Q
    |||||    
T  45602445 ttgac 45602441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 45863231 - 45863307
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactc 151  Q
    |||||||||||||||||||||||||||||| ||| |||  |||||||||||||||||||| ||||||||||||||||    
T  45863231 caatgttccgcaaatcgagtgttaactctctgagattaaagagtttacgtttttaggtacaaaaatcgtgttaactc 45863307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 36673944 - 36673831
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||| |||||||||||||||| |||||||| |||  ||||| || |||||| |||| ||||||||||||||||  ||||||| || ||||||||||    
T  36673944 caatgttctgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaagtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 36673845  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  36673844 aaattggaaggttt 36673831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 49296077 - 49296193
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  49296077 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 49296176  T
Q  175 aaatcgaaaggtttgac 191  Q
    ||||||||| |||||||    
T  49296177 aaatcgaaaagtttgac 49296193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 8598620 - 8598736
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  8598620 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 8598719  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  8598720 aaatcggaaagtttgac 8598736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 176
Target Start/End: Complemental strand, 21718552 - 21718452
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    ||||||||  |||||||||||||||||  |||  |||||||||||||||||| || |||||||||||||| |||||| || |||||||  ||||| ||||    
T  21718552 aatgttccaaaaatcgagtgttaactcgtcgattttactgagtttacgttttaagataccaaaatcgtgtcaactcaaagataaactcgatttctagtaa 21718453  T
Q  176 a 176  Q
    |    
T  21718452 a 21718452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 25049872 - 25049947
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttga 190  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||  ||||| ||||||||| || ||||||    
T  25049872 gagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgatttctagtaaaatcggaatgtttga 25049947  T

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Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 115 - 251
Target Start/End: Original strand, 49458359 - 49458504
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaag---------gtttgaccgagttaaaactcg 205  Q
    |||||||||| |||||||| |||||| ||||||||||  | ||||||||  ||||||||||||||| |||         |||||||| | |||| ||||     
T  49458359 gagtttacgtgtttaggtatcaaaattgtgttaactctgaagtaaactcgatttctggtaaaatcggaaggtttgacgagtttgaccaaattaacactca 49458458  T
Q  206 ataaattcgtgtaaaattgaccgaattttacgagtttacatctaaa 251  Q
     |||| ||||||||| | |||||| |||||||||||||||||||||    
T  49458459 gtaaactcgtgtaaactcgaccgagttttacgagtttacatctaaa 49458504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 42736268 - 42736384
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||| ||||| |||||||| |   |||| |||  |||||| ||||||||| ||||||||||||||||||    || |||||| |||||||||||    
T  42736268 caatgttccgtaaatcaagtgttaatttgtcgagtttatcgagtttgcgtttttagataccaaaatcgtgttaacattgagataaacttagtttctggta 42736367  T
Q  175 aaatcgaaaggtttgac 191  Q
    ||||| ||| |||||||    
T  42736368 aaatcaaaaagtttgac 42736384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 22489584 - 22489511
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggttt 188  Q
    |||||||||| ||||||| |||||| |||||||| ||| | ||||||||  ||||||||||||||| |||||||    
T  22489584 gagtttacgtgtttaggtgccaaaaacgtgttaaatcagatgtaaactcgatttctggtaaaatcggaaggttt 22489511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 53835923 - 53836039
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| || ||  |||| |||| |||||||||| ||||||| | |||| ||||||||||   |||||||||   |||||||||    
T  53835923 caatgttccacaaatcgcgtgtcaattcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaacttggaggtaaacttgatttctggta 53836022  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  53836023 aaatcggaaagtttgac 53836039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 53645415 - 53645337
Alignment:
Q  113 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||| ||||||||||||  ||||| ||| | |||||| ||||||||||||||| |||| |||||| || |||||||    
T  53645415 ctgagttaacgtttttaggtggcaaaaacgtataaactcagaggtaaactcagtttttggtgaaatcggaaagtttgac 53645337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 9818664 - 9818588
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||  ||||| |||||||||||  ||||||||||  ||| |||| |||||| || |||||||    
T  9818664 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 9818588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 40064279 - 40064355
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||  ||||| ||||| ||||   ||||||| | ||||| |||| ||||||||| |||||||    
T  40064279 gagtttacgtttttaggtggcaaaaacgtgtaaacttggaggtaaatttagtttttggtgaaatcgaaaagtttgac 40064355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 75 - 179
Target Start/End: Complemental strand, 215049 - 214945
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||| ||||||||||| |||||| |||| || ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  215049 caatgttccgcaaattgagtgttaactttccgagattaccgaatttacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcagtttctggta 214950  T
Q  175 aaatc 179  Q
    |||||    
T  214949 aaatc 214945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 6224369 - 6224256
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||  ||||||||||||||| ||||| ||||| |||||| |||    
T  6224369 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacacaaatcgtgttaactcttaggtgaactcggtttctagta 6224270  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  6224269 aaatcggaaggttt 6224256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 15224190 - 15224307
Alignment:
Q  74 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 173  Q
    ||||||||||||||||||||||||||| ||||||| ||||  | ||||||| ||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  15224190 gcaatgttccgcaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcagaggtaaactcgatttctggt 15224289  T
Q  174 aaaatcgaaaggtttgac 191  Q
     ||||||||| |||||||    
T  15224290 gaaatcgaaaagtttgac 15224307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 28740086 - 28739973
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  28740086 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 28739987  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  28739986 aaattggaaggttt 28739973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 7027313 - 7027426
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  7027313 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 7027412  T
Q  175 aaatcgaaaggttt 188  Q
    |||| |||||||||    
T  7027413 aaattgaaaggttt 7027426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 25288573 - 25288686
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||| | ||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  |||||||||| |||||| |||    
T  25288573 caatgttccgcaaatcgaatattaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 25288672  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  25288673 aaatcggaaggttt 25288686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 34342199 - 34342315
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||  | ||||| | |  |||||||||| ||||||||||    
T  34342199 caatgttccgcaaatcgagtgttaactctctgagtttaccgagtttacgtttttaggtaccaaatccatgttagcactaaggtaaactcggtttctggta 34342298  T
Q  175 aaatcgaaaggtttgac 191  Q
    || ||| ||||||||||    
T  34342299 aactcggaaggtttgac 34342315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 40829596 - 40829713
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagc--ttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 173  Q
    ||||||||| |||| ||||||||||||||||||   |||| |||| ||| |||||||||| |||||||||||||||||  |||||||||| |||||||||    
T  40829596 aatgttccgtaaattgagtgttaactctccgagagtttaccgagtctacatttttaggtatcaaaatcgtgttaactcggaggtaaactcggtttctggt 40829695  T
Q  174 aaaatcgaaaggtttgac 191  Q
    ||||| ||||||||||||    
T  40829696 aaaatagaaaggtttgac 40829713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 10657840 - 10657953
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||| ||  ||| |||||    
T  10657840 caatgttccgtaaatcgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggta 10657939  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  10657940 aaattggaaggttt 10657953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 28844995 - 28845108
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||| |||||||||||||||||||||||||||| |||  ||||||| |||||||||||| ||||||||||||||||  ||||||| || ||||||| ||    
T  28844995 caatgatccgcaaatcgagtgttaactctccgagattatcgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgata 28845094  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  28845095 aaattggaaggttt 28845108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 179
Target Start/End: Complemental strand, 13833211 - 13833107
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||| || |||||||||| |||| |||  |||||||||||||||||||| ||||||||||||||||  ||||||||||| ||||| |||    
T  13833211 caatgttccgcaaattgaatgttaactcttcgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcaatttctagta 13833112  T
Q  175 aaatc 179  Q
    |||||    
T  13833111 aaatc 13833107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 379340 - 379450
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||  ||| |||| || ||||||||||||||||| ||||||||||||||||  ||||||| || |||| || ||    
T  379340 caatgttccgcaaatcgagtgttaactctttgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttttgata 379439  T
Q  175 aaatcgaaagg 185  Q
    |||||| ||||    
T  379440 aaatcggaagg 379450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 86 - 255
Target Start/End: Complemental strand, 2308843 - 2308665
Alignment:
Q  86 aaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatc------ 179  Q
    ||||||||||||||||| ||||| ||| | | |||||||||||| |||||||||||||||||||||  ||||||| || |||| ||||||||||          
T  2308843 aaatcgagtgttaactcgccgagtttattaaatttacgtttttatgtaccaaaatcgtgttaactcggaggtaaattcggtttgtggtaaaatcaaaaag 2308744  T
Q  180 ---gaaaggtttgaccgagttaaaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatctaaaaata 255  Q
       || | |||||||| |||||| ||||| |||| ||||||||| | || ||| |||||||||||||| ||||||||||    
T  2308743 tttgacaagtttgaccaagttaacactcggtaaaatcgtgtaaactcgatcgagttttacgagtttacttctaaaaata 2308665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 33136028 - 33136139
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||| |||   || ||||||| |||||||||||| ||||||||||||||||  ||||||||||  |||||||||    
T  33136028 caatgttccgcaaatcgagtgttaactctctgaga--accgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggta 33136125  T
Q  175 aaatcgaaaggttt 188  Q
     ||||| |||||||    
T  33136126 taatcggaaggttt 33136139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 3575251 - 3575364
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||| || |||||||| | |||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||  ||||||| || ||||||||||    
T  3575251 caatgtccctcaaatcgaatattaactatccgagattactgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggta 3575350  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  3575351 aaattggaaggttt 3575364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 26789195 - 26789308
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||| |||||||||||||||| |||||||| |||  ||||| || ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  26789195 caatgttctgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 26789294  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  26789295 aaattggaaggttt 26789308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 74 - 253
Target Start/End: Complemental strand, 31847360 - 31847171
Alignment:
Q  74 gcaatgttccgcaaatcgagtgttaactctccgagcttactgag-tttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctgg 172  Q
    |||||||||| |||||||||||||||||||||||| |||  ||| ||||||||||||||||  |||||| || ||||||  ||||||||||  ||||||     
T  31847360 gcaatgttcctcaaatcgagtgttaactctccgagtttatcgagttttacgtttttaggtattaaaatcatggtaactcggaggtaaactctatttctga 31847261  T
Q  173 taaaatcgaaaggttt---------gaccgagttaaaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatctaaaaa 253  Q
    |||||||  |||||||         |||||| |||| ||||| |||| |||||||||  ||||||| ||||||||||||| |||||||||    
T  31847260 taaaatcagaaggtttgacgagttcgaccgaattaacactcggtaaactcgtgtaaacatgaccgagttttacgagtttaaatctaaaaa 31847171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 75 - 178
Target Start/End: Original strand, 18177681 - 18177784
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||| |||||||||||||| ||| |||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  18177681 caatgttccgtaaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18177780  T
Q  175 aaat 178  Q
    ||||    
T  18177781 aaat 18177784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 18900069 - 18899952
Alignment:
Q  74 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 173  Q
    |||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  ||||| ||    
T  18900069 gcaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagt 18899970  T
Q  174 aaaatcgaaaggtttgac 191  Q
    ||||||| || |||||||    
T  18899969 aaaatcggaaagtttgac 18899952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 3464051 - 3464115
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaat 140  Q
    |||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||| |||||    
T  3464051 aatgttccgcaaatcgtgtgttaactctccgagattaccgagtttacatttttaggtacaaaaat 3464115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 35404419 - 35404343
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||||| |||||||||||||| | |||||||||| |||| ||||||||| | || |||||||    
T  35404419 gagtttacgtttttaggtaccgaaatcgtgttaacttagaggtaaactcggtttttggtaaaattggaaagtttgac 35404343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 18727732 - 18727595
Alignment:
Q  130 ggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac---------cgagttaaaactcgataaattcgtgtaaa 220  Q
    |||||||||| |||||||||||  ||||||||||   ||||||||||||| ||| |||||||         |||||||| | |||||||| |||||||||    
T  18727732 ggtaccaaaaccgtgttaactcggaggtaaactcgaattctggtaaaatcaaaaagtttgacgagtttcaccgagttaacattcgataaactcgtgtaaa 18727633  T
Q  221 attgaccgaattttacgagtttacatctaaaaatataa 258  Q
     | |||||| ||||||||||||| ||||||||| ||||    
T  18727632 ctcgaccgagttttacgagtttatatctaaaaaaataa 18727595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 3991774 - 3991850
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| ||||||||| |||||||    
T  3991774 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcgaaaagtttgac 3991850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 12877687 - 12877771
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaa 199  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| || | |||||| || |||||||||||||||    
T  12877687 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttgatgaaatcggaaagtttgaccgagttaa 12877771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 15926379 - 15926455
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||||||||| |||||||||||||||| |||||  |||| |||||  ||||||||||||||| || |||||||    
T  15926379 gagtttacgttttttggtaccaaaatcgtgtcaactcggaggttaactcgatttctggtaaaatcgcaatgtttgac 15926455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 11153447 - 11153384
Alignment:
Q  118 tttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcga 181  Q
    ||||||||||||||| |  |||||||||||||||  |||||||||| |||||||||||||||||    
T  11153447 tttacgtttttaggtgctgaaatcgtgttaactcggaggtaaactcggtttctggtaaaatcga 11153384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 19948539 - 19948615
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||| |||||||||  ||||| |||||||||||  ||||||||||||||| |||| |||||| || |||||||    
T  19948539 gagtttacatttttaggtggcaaaaacgtgttaactcggaggtaaactcagtttttggtgaaatcggaaagtttgac 19948615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 33262854 - 33262930
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||  ||||| ||||| |||||  |||||||||| |||| |||| |||||| || |||||||    
T  33262854 gagtttacgtttttaggtggcaaaaacgtgtaaactcgaaggtaaactcggtttttggtgaaatcggaaagtttgac 33262930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 38413554 - 38413478
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||  ||||| ||||| |||||  |||||||||| |||| |||| |||||| || |||||||    
T  38413554 gagtttacgtttttaggtggcaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 38413478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 13898475 - 13898553
Alignment:
Q  113 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||||||||||||||   ||||| |||||||||||  ||||||||||  ||| |||| |||||| || |||||||    
T  13898475 ctgagtttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 13898553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 14039092 - 14039170
Alignment:
Q  113 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||||||||||||||   ||||| |||||||||||  ||||||||||  ||| |||| |||||| || |||||||    
T  14039092 ctgagtttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 14039170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 32242308 - 32242242
Alignment:
Q  113 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatc 179  Q
    |||||||||| |||| || ||||||||||||||||||||  |||||||||   ||||| ||||||||    
T  32242308 ctgagtttacattttgagataccaaaatcgtgttaactctgaggtaaacttgatttcttgtaaaatc 32242242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 32293912 - 32293989
Alignment:
Q  113 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||||||||||| ||||||||||||||||||| ||  | |||||||   ||||| ||||||||| || |||||||    
T  32293912 ctgagtttacgttttt-ggtaccaaaatcgtgttaaatctgatgtaaactggatttcttgtaaaatcggaatgtttgac 32293989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 191
Target Start/End: Complemental strand, 3858551 - 3858446
Alignment:
Q  86 aaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaagg 185  Q
    |||| |||||||||||| ||||| | || || |||||||||||| ||  |||||| |||| ||||   ||||||||||  ||| ||||||||||| || |    
T  3858551 aaattgagtgttaactcgccgagttaaccgaatttacgtttttaagtgtcaaaattgtgtcaacttgaaggtaaactcgatttttggtaaaatcggaatg 3858452  T
Q  186 tttgac 191  Q
    ||||||    
T  3858451 tttgac 3858446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 43305111 - 43305035
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttt-taggtaccaaaatcgtgttaactc 151  Q
    |||||||| ||||||||||||||| ||  |||| |||| |||||| |||||| |||||| |||| | ||||||||||    
T  43305111 aatgttccacaaatcgagtgttaattcgtcgagtttaccgagttttcgttttataggtatcaaactagtgttaactc 43305035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 43825299 - 43825327
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactct 103  Q
    |||||||||||||||||||||||||||||    
T  43825299 caatgttccgcaaatcgagtgttaactct 43825327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 16438665 - 16438783
Alignment:
Q  73 agcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctgg 172  Q
    |||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| |||||||||||||||   ||||||||||   ||||||    
T  16438665 agcaatgttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctgg 16438764  T
Q  173 taaaatcgaaaggtttgac 191  Q
    |||||||| ||||||||||    
T  16438765 taaaatcggaaggtttgac 16438783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 75 - 253
Target Start/End: Original strand, 2606856 - 2607043
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||| ||||||||||  ||| ||||||||||||||| |||||| ||||||||||| |||||||  ||||||||||  |||||||||    
T  2606856 caatgttccgcaaatcgaatgttaactctttgagtttactgagtttacgtgtttaggcaccaaaatcgttttaactctgaggtaaactcgatttctggta 2606955  T
Q  175 aaatcgaaag---------gtttgaccgagttaaaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatctaaaaa 253  Q
    |||||  |||         ||||||||||||||| |||| ||||| || | |||| | |||||| |||||||||||||||||||||||    
T  2606956 aaatcagaaggtttgatgagtttgaccgagttaacactcaataaactcttataaactcgaccgagttttacgagtttacatctaaaaa 2607043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 7497507 - 7497620
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||| ||||||||||||||| |||   ||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  7497507 caatgttccgcaaatcgaatgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 7497606  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  7497607 aaattggaaggttt 7497620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 30384856 - 30384743
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||||||||||  ||||||| |||||||||| ||    
T  30384856 caatgatccgcaaatcgagtgttaactctccgagattaccgagtttatgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcagtttctgata 30384757  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  30384756 aaattggaaggttt 30384743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 31975791 - 31975675
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||| || ||||||| ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||  ||||||||||  ||||| |||    
T  31975791 caatgctcggcaaatcaagtgttaactctccgagtttactgagtttatgtgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttcttgta 31975692  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| ||||||||||    
T  31975691 aaatcggaaggtttgac 31975675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 31067841 - 31067954
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  31067841 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 31067940  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  31067941 aaattggaaggttt 31067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 14262228 - 14262115
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||   ||||||| ||||||||||| ||||||||||||||||  ||||||| ||  |||||||||    
T  14262228 caatgttccgcaaatcgagtgttaactctccgagattatctagtttacttttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggta 14262129  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  14262128 aaattggaaggttt 14262115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 34758871 - 34758758
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||| |||||||||||||| |||   ||||||||||||||||||| ||||||||||||||||  ||||||| || ||||||| ||    
T  34758871 caatgttccgcaaatcgagcgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgata 34758772  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  34758771 aaattggaaggttt 34758758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 4200243 - 4200130
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| |||||| |||| |||||| |||||||||  ||||||| || ||||||||||    
T  4200243 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaagtacaaaaatcatgttaactctgaggtaaaatcggtttctggta 4200144  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  4200143 aaattggaaggttt 4200130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 31896046 - 31896159
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||| |||||||||||||| |||||||| |||  |||| ||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  31896046 caatgttccgtaaatcgagtgttaaatctccgagattatcgagtatacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 31896145  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  31896146 aaattggaaggttt 31896159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 210
Target Start/End: Complemental strand, 28900965 - 28900842
Alignment:
Q  78 tgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaa 177  Q
    ||||||| |||||||||||||||||||||||         ||||| | ||||||||||||||||||||||||||  ||||||||||  ||||||||||||    
T  28900965 tgttccgtaaatcgagtgttaactctccgag---------tttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaa 28900875  T
Q  178 tcgaaaggtttgaccgagttaaaactcgataaa 210  Q
    ||| |||||||| ||||||||| ||||| ||||    
T  28900874 tcggaaggtttggccgagttaacactcggtaaa 28900842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 76 - 180
Target Start/End: Original strand, 3000202 - 3000306
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    |||||||| |||||| ||||||||||| ||||| ||||||| ||||||| ||||||||||||||||||||||||||   |||||| ||  ||| ||||||    
T  3000202 aatgttccacaaatcaagtgttaactcgccgagtttactgattttacgtgtttaggtaccaaaatcgtgttaactcgggggtaaattcgatttatggtaa 3000301  T
Q  176 aatcg 180  Q
    |||||    
T  3000302 aatcg 3000306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 1463810 - 1463694
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  1463810 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 1463711  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  1463710 aaatcggaaagtttgac 1463694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 6788061 - 6788177
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  6788061 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 6788160  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  6788161 aaatcggaaagtttgac 6788177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 10113921 - 10113803
Alignment:
Q  73 agcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctgg 172  Q
    ||||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  ||| |||    
T  10113921 agcaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtcctaaaaacgtgttaactcggaggtaaactcgttttttgg 10113822  T
Q  173 taaaatcgaaaggtttgac 191  Q
    |||||||| || |||||||    
T  10113821 taaaatcggaaagtttgac 10113803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 33641376 - 33641286
Alignment:
Q  126 tttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaaaactcgataaattcgtg 216  Q
    |||||||| |||||||||||||||||  | ||||||||| ||  ||||||||||  |||||||||||||||||| |||||||||| |||||    
T  33641376 tttaggtatcaaaatcgtgttaactctgatgtaaactcaattaatggtaaaatcataaggtttgaccgagttaacactcgataaactcgtg 33641286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 31535159 - 31535083
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||| |||||||||| |||||| ||||||||||  ||| ||||||  ||||||||||||||||||||||||||    
T  31535159 gagtttacatttttaggtatcaaaattgtgttaactctgaggcaaactcgatttctggtaaaatcgaaaggtttgac 31535083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 199
Target Start/End: Complemental strand, 7835463 - 7835379
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaa 199  Q
    ||||||||||||||||||  ||||| |||||||| ||  |||||||||| |||| |||| |||||| || |||||||||||||||    
T  7835463 gagtttacgtttttaggtggcaaaaacgtgttaagtcggaggtaaactcggtttttggtgaaatcggaaagtttgaccgagttaa 7835379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 13461372 - 13461438
Alignment:
Q  113 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatc 179  Q
    ||||||||||||||||| ||| ||||||||||| |||||  |||||||||| |||| ||||||||||    
T  13461372 ctgagtttacgtttttatgtatcaaaatcgtgtcaactcggaggtaaactcggtttttggtaaaatc 13461438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 34773807 - 34773872
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatc 141  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||||||  |||||||||| ||||||    
T  34773807 caatgttccgcaaatcgagtgttaaatctccgagattattgagtttac-attttaggtacaaaaatc 34773872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 8779680 - 8779604
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||||| || |||||||    
T  8779680 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 8779604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 31996347 - 31996271
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||  ||||| |||||||||||  ||||||||||  ||| |||| |||||| || |||||||    
T  31996347 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 31996271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 21199556 - 21199631
Alignment:
Q  116 agtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    |||||||||||||||||  ||||| |||||||||||  ||||||||||  ||| |||| |||||| || |||||||    
T  21199556 agtttacgtttttaggtggcaaaaccgtgttaactccaaggtaaactcgatttttggtgaaatcggaaagtttgac 21199631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 1460938 - 1460828
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||  ||| |||| |||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||    
T  1460938 caatgttccgcaaatcgagtgttaactctttgagattaccgagtttacgtttttaggtacaaaaattgtgttaactcagaggtaaactcggtttctggta 1460839  T
Q  175 aaatcgaaagg 185  Q
    |||||| ||||    
T  1460838 aaatcggaagg 1460828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 4240258 - 4240145
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||| | ||||||||||||||||  |||||||||| ||||||||||    
T  4240258 caatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtgcaaaaatcgtgttaactctgaggtaaactccgtttctggta 4240159  T
Q  175 aaatcgaaaggttt 188  Q
    |||||| |||||||    
T  4240158 aaatcggaaggttt 4240145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 4550050 - 4549937
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  4550050 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtgtttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 4549951  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  4549950 aaattggaaggttt 4549937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 13926341 - 13926454
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  13926341 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 13926440  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  13926441 aaattggaaggttt 13926454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 37014264 - 37014377
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  37014264 caatgtttcgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 37014363  T
Q  175 aaatcgaaaggttt 188  Q
    |||| |||||||||    
T  37014364 aaattgaaaggttt 37014377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 75 - 229
Target Start/End: Original strand, 34218430 - 34218584
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||| |||||||||| |||||||||| ||| ||| ||||  ||||||||||||||| ||||||||||||||||| ||  ||||||| || ||||||| ||    
T  34218430 caatattccgcaaattgagtgttaacactctgagtttaccaagtttacgtttttagataccaaaatcgtgttaattcgaaggtaaattcggtttctgcta 34218529  T
Q  175 aaatcgaaaggtttgaccgagttaaaactcgataaattcgtgtaaaattgaccga 229  Q
    |||||  |||||||||||||||||| ||||  |||||||||||||| | ||||||    
T  34218530 aaatcagaaggtttgaccgagttaatactcagtaaattcgtgtaaactcgaccga 34218584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 72 - 191
Target Start/End: Complemental strand, 16548988 - 16548869
Alignment:
Q  72 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 171  Q
    ||||||||||||  |||||||||||||||||   ||| |||  ||||||||||||||||||||||||||||||| |||||  ||||||||||| ||||||    
T  16548988 aagcaatgttccataaatcgagtgttaactcattgagtttatcgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcaatttctg 16548889  T
Q  172 gtaaaatcgaaaggtttgac 191  Q
    |||||||||||| |||||||    
T  16548888 gtaaaatcgaaatgtttgac 16548869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 5949522 - 5949634
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  5949522 caatgttccgcaaatcgagtattaactctccgagatta-tcagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 5949620  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  5949621 aaattggaaggttt 5949634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 40013496 - 40013384
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| |||||| |||  ||||||||||||||||  ||||||| || |||||||||||    
T  40013496 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaagtataaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 40013397  T
Q  176 aatcgaaaggttt 188  Q
    ||| | |||||||    
T  40013396 aattggaaggttt 40013384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 86 - 191
Target Start/End: Complemental strand, 29716920 - 29716815
Alignment:
Q  86 aaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaagg 185  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||| |||||||||||||||||  |||||||||   ||||||||||||||  ||||    
T  29716920 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaacttgatttctggtaaaatcagaagg 29716821  T
Q  186 tttgac 191  Q
    ||||||    
T  29716820 tttgac 29716815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 39852780 - 39852893
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| ||  ||| |||||    
T  39852780 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggta 39852879  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  39852880 aaattggaaggttt 39852893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 5651327 - 5651211
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||| || |||| |||  || ||||||| ||||||||||||||||||||||||||  ||||||||||  ||||||||     
T  5651327 caatgttccgcaaatcgagtgttaacacttcgagtttatcgattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtg 5651228  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||| |||| |||||||    
T  5651227 aaattgaaaagtttgac 5651211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 15672819 - 15672703
Alignment:
Q  77 atgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaa 176  Q
    ||||||| |||||| ||||||||||| ||||| |||||||||||| |||||||||||| |||||||||| |||||| || ||||||   ||| |||||||    
T  15672819 atgttccacaaatcaagtgttaactcgccgagtttactgagtttatgtttttaggtactaaaatcgtgtcaactcaaagataaacttgatttatggtaaa 15672720  T
Q  177 atcgaaaggtttgaccg 193  Q
    |||| || |||||||||    
T  15672719 atcggaatgtttgaccg 15672703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 13999886 - 13999773
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||||||||||||||||||| |||||||| |||  ||||| || ||||||||||| |||||||||||||||   || |||| || ||||||||||    
T  13999886 caatgttccgcaaatcgagtgttaaatctccgagattatggagttgacatttttaggtacaaaaatcgtgttaactttgagataaaatcggtttctggta 13999787  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  13999786 aaattggaaggttt 13999773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 7125305 - 7125189
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  7125305 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 7125206  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||||| || |||||||    
T  7125205 aaatcggaaagtttgac 7125189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 37798263 - 37798144
Alignment:
Q  71 aaagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttct 170  Q
    ||||||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||  |   |||| |||||||||||| ||||||||||| |||||    
T  37798263 aaagcaatgttccacaaatcg-gtgtcaactcggcgagtttaccgagtttacgtgtttatctgttaaaaacgtgttaactcaaaggtaaactcaatttct 37798165  T
Q  171 ggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||| |||||||    
T  37798164 ggtaaaatcgaaaagtttgac 37798144  T

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Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 21489862 - 21489965
Alignment:
Q  76 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 175  Q
    |||||||| ||||||||||||||||| | | || ||| ||| ||||| |||||||||||||||||||||| || ||  || ||||||   ||||||||||    
T  21489862 aatgttccacaaatcgagtgttaacttttcaagtttattgattttacatttttaggtaccaaaatcgtgtcaattcgaagataaacttgatttctggtaa 21489961  T
Q  176 aatc 179  Q
    ||||    
T  21489962 aatc 21489965  T

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Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 25868800 - 25868881
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagt 196  Q
    ||||||| ||||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||||| || ||||||||||||    
T  25868800 gagtttatgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgaccgagt 25868881  T

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Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 2675174 - 2675098
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||||||||  ||||| |||||||||||  ||||||||||  ||| |||| ||||||||| |||||||    
T  2675174 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcgaaaagtttgac 2675098  T

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Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 28623307 - 28623191
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| ||||||| |||| |||||  |||| |||  |||||||||| ||||||| | |||| |||||||||||  || |||||||  |||||||||    
T  28623307 caatgttccacaaatcgcgtgtcaactcagcgagtttatcgagtttacgtgtttaggtgctaaaaacgtgttaactcggagataaactcgatttctggta 28623208  T
Q  175 aaatcgaaaggtttgac 191  Q
    |||| | || |||||||    
T  28623207 aaattgcaaagtttgac 28623191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 21238856 - 21238783
Alignment:
Q  118 tttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 191  Q
    ||||||||||||| |  ||||| |||||||||||  |||||||||| |||| ||||||||||| || |||||||    
T  21238856 tttacgtttttagatggcaaaaacgtgttaactcggaggtaaactcggtttttggtaaaatcggaaagtttgac 21238783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 29758707 - 29758743
Alignment:
Q  115 gagtttacgtttttaggtaccaaaatcgtgttaactc 151  Q
    ||||||||||||||||||| |||||||||||||||||    
T  29758707 gagtttacgtttttaggtatcaaaatcgtgttaactc 29758743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 1276 - 1389
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||| || |||||| |||    
T  1276 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttcttgta 1375  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  1376 aaattggaaggttt 1389  T

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Target: scaffold0543 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 10934 - 11047
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| ||  ||| |||||    
T  10934 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggta 11033  T
Q  175 aaatcgaaaggttt 188  Q
    |||| | |||||||    
T  11034 aaattggaaggttt 11047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 258
Target Start/End: Original strand, 89241 - 89424
Alignment:
Q  75 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 174  Q
    |||||||||| ||||||||||||||||||  ||| |||  ||||||| ||||||||||||||| ||||||||||||   ||||||||||  |||||||||    
T  89241 caatgttccgtaaatcgagtgttaactctgtgagtttatcgagtttaagtttttaggtaccaatatcgtgttaacttgaaggtaaactcgatttctggta 89340  T
Q  175 aaatcgaaaggtttgaccgagttaaaactcgataa-attcgtgtaaaattgaccgaattttacgagtttacatctaaaaatataa 258  Q
    |||| | ||||||||| ||||||  | |  | ||| | ||||||||| |  ||||| ||||||||||||||||||||||| ||||    
T  89341 aaattggaaggtttga-cgagtttgatcgagttaacactcgtgtaaactccaccgagttttacgagtttacatctaaaaacataa 89424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 210
Target Start/End: Original strand, 8829 - 8952
Alignment:
Q  78 tgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaa 177  Q
    ||||||| |||||||||||||||||||||||         ||||| | ||||||||||||||||||||||||||  ||||||||||  ||||||||||||    
T  8829 tgttccgtaaatcgagtgttaactctccgag---------tttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaa 8919  T
Q  178 tcgaaaggtttgaccgagttaaaactcgataaa 210  Q
    ||| |||||||| ||||||||| ||||| ||||    
T  8920 tcggaaggtttggccgagttaacactcggtaaa 8952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 16754 - 16708
Alignment:
Q  142 gtgttaactcataggtaaactcagtttctggtaaaatcgaaaggttt 188  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||||    
T  16754 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggttt 16708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 20990 - 20944
Alignment:
Q  142 gtgttaactcataggtaaactcagtttctggtaaaatcgaaaggttt 188  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||||    
T  20990 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggttt 20944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 28811 - 28857
Alignment:
Q  142 gtgttaactcataggtaaactcagtttctggtaaaatcgaaaggttt 188  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||||    
T  28811 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggttt 28857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 25702 - 25642
Alignment:
Q  113 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 173  Q
    ||||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| ||||    
T  25702 ctgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggt 25642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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