View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3710_high_44 (Length: 385)
Name: NF3710_high_44
Description: NF3710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3710_high_44 |
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Alignment Details
Target: chr7 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 18 - 378
Target Start/End: Complemental strand, 8435494 - 8435136
Alignment:
| Q |
18 |
cagtttgtggcattgaaattgagtagctcatcaaacatacattgataaaaatttaactttgtttatgatatccatcaagcattaattaatttcgagctta |
117 |
Q |
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| T |
8435494 |
cagtttgtggcattgaaattgagtagctcatcaaacatacattgataaaaatttaactttgtttatgatatccatcaagcattaattaatttcgagctta |
8435395 |
T |
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| Q |
118 |
taaacatatactcagtttaaaaaatataagatgccaatagaggacaattagaggcatgtccaaaataagagatagaaatagttgaactatatgagaccgt |
217 |
Q |
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| T |
8435394 |
taaaattatactcagtttaaaaaatataagatgccaatagaggacaattagagacatgtccaaaataagagatagaaatagttgaactatatgagaccgt |
8435295 |
T |
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| Q |
218 |
accgacacatttgtagagacagatcaacacggttttgtcacaaaccaaaggccgaaaatgatagcaatattatataattctaatggtaaatttgtcgatg |
317 |
Q |
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| T |
8435294 |
accgacacatttgaagagacagatcaagacggttttgtcacaaaccaaaggccgaaaatgatagcaatattatataattctaatggtaactttgtcgatg |
8435195 |
T |
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| Q |
318 |
atctaaaaatgtgacgctgcaatgaaaattaaacgaagaaactgtagtgtctctatctctg |
378 |
Q |
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| T |
8435194 |
atctaaaaatgtg--gctgcaatgaaaattaaacgaagaaactgtaatgtctctatctctg |
8435136 |
T |
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