View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3710_high_67 (Length: 301)
Name: NF3710_high_67
Description: NF3710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3710_high_67 |
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Alignment Details
Target: chr3 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 19 - 294
Target Start/End: Original strand, 53479013 - 53479291
Alignment:
| Q |
19 |
ttgaatgtgctacagtgttagattaggtggttacatacatatcctaatctagataagcgattgaaattcccttcagattcaattaggtggctttctatat |
118 |
Q |
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| T |
53479013 |
ttgaatgtgctacagtgttagattaggtggttacatacatatcctaatctagataagcgattgaaattcccttcacattcaattaggtggctttctatat |
53479112 |
T |
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| Q |
119 |
ttgttgctgttgtatgtatgactaaaagaaaaagtgtgtgagaaattaaaggtaaaggagactgagaaatgacatgcgagctctccattattctactcta |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53479113 |
ttgttgctgttgtatgtatgactaaaagaaaaagtgtgtgagaaattaaaggtaaaggagactgagaaatgacatgcgagctctccattattctactcta |
53479212 |
T |
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| Q |
219 |
attctaatgaatg---acttgatgaacctattctaaatttaattgcaattcatttttctcccaaaaaattcgttctgtg |
294 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53479213 |
attctaatgaatgaaaacttgatgaacctattctaaatttaattgcaattcatttttctcccaaaaaattcgttctgtg |
53479291 |
T |
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