View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3710_low_118 (Length: 234)
Name: NF3710_low_118
Description: NF3710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3710_low_118 |
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Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 14 - 224
Target Start/End: Original strand, 4313097 - 4313307
Alignment:
| Q |
14 |
gtttccactctgaatgatcagctaagctaataaagaattctggaccgggaccgattaaagcaactgaacctcttcttaggattggacaatcttcaacagg |
113 |
Q |
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| T |
4313097 |
gtttccactctgaatgatcagctaagctaataaagaattctggaccgggaccgattaaagcaactgaacctcttcttaggattggacaatcttcaacagg |
4313196 |
T |
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| Q |
114 |
aagtttattgaatggtgtgccttgtgcttctaatgtcccttgaattaatgcaaatggaggaccaaaaccagcctgcaaaataagaactcgtttaccatca |
213 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4313197 |
aagtttgttgaatggtgtgccttgtgcttctaatgtcccttgaattaatgcaaatggaggaccaaaaccagcctgcaaaataagaactcgtttaccatca |
4313296 |
T |
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| Q |
214 |
tcaaccactac |
224 |
Q |
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||||||||||| |
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| T |
4313297 |
tcaaccactac |
4313307 |
T |
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