View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3710_low_84 (Length: 275)

Name: NF3710_low_84
Description: NF3710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3710_low_84
NF3710_low_84
[»] chr7 (19 HSPs)
chr7 (11-258)||(46945722-46945969)
chr7 (136-241)||(12110298-12110403)
chr7 (130-181)||(31341126-31341177)
chr7 (127-186)||(35536036-35536095)
chr7 (57-110)||(425965-426018)
chr7 (122-241)||(3610767-3610886)
chr7 (134-241)||(28165027-28165134)
chr7 (135-238)||(39169446-39169548)
chr7 (58-113)||(47795832-47795886)
chr7 (71-113)||(7612346-7612388)
chr7 (64-110)||(31002946-31002992)
chr7 (66-112)||(32156891-32156937)
chr7 (64-118)||(48131229-48131283)
chr7 (128-177)||(2013129-2013178)
chr7 (135-172)||(41668206-41668243)
chr7 (135-172)||(41668884-41668921)
chr7 (64-123)||(18865190-18865249)
chr7 (136-240)||(45530459-45530563)
chr7 (197-241)||(46056037-46056081)
[»] chr2 (17 HSPs)
chr2 (138-241)||(4090289-4090392)
chr2 (127-183)||(28933753-28933809)
chr2 (129-241)||(41817099-41817211)
chr2 (143-241)||(43259779-43259877)
chr2 (142-203)||(787275-787336)
chr2 (135-258)||(39621890-39622012)
chr2 (64-113)||(41880643-41880692)
chr2 (114-186)||(35459826-35459898)
chr2 (143-186)||(23143060-23143103)
chr2 (143-186)||(23554850-23554893)
chr2 (143-241)||(656804-656902)
chr2 (136-186)||(7928376-7928426)
chr2 (135-172)||(32821746-32821783)
chr2 (130-186)||(32098390-32098446)
chr2 (137-241)||(35486390-35486494)
chr2 (137-181)||(38239638-38239682)
chr2 (146-222)||(41407023-41407099)
[»] chr1 (19 HSPs)
chr1 (139-241)||(3924565-3924667)
chr1 (56-113)||(48064181-48064238)
chr1 (137-240)||(219579-219678)
chr1 (64-110)||(10280522-10280568)
chr1 (64-113)||(10744188-10744237)
chr1 (64-113)||(27820481-27820529)
chr1 (122-175)||(45667835-45667888)
chr1 (136-241)||(35017512-35017619)
chr1 (143-186)||(11560631-11560674)
chr1 (122-177)||(13037788-13037843)
chr1 (115-186)||(40304136-40304207)
chr1 (64-110)||(36070146-36070192)
chr1 (134-172)||(48748422-48748460)
chr1 (84-117)||(47885144-47885177)
chr1 (64-104)||(1725245-1725285)
chr1 (129-185)||(4549797-4549853)
chr1 (114-186)||(7274021-7274093)
chr1 (61-113)||(10799339-10799391)
chr1 (60-123)||(51688572-51688635)
[»] chr5 (20 HSPs)
chr5 (125-179)||(3951883-3951937)
chr5 (59-123)||(26807406-26807470)
chr5 (54-118)||(38104999-38105063)
chr5 (137-202)||(18857466-18857531)
chr5 (59-120)||(26796338-26796399)
chr5 (59-120)||(26799856-26799917)
chr5 (133-241)||(17368611-17368719)
chr5 (54-113)||(28776846-28776904)
chr5 (53-104)||(32849079-32849130)
chr5 (138-185)||(32897397-32897444)
chr5 (122-181)||(37063161-37063220)
chr5 (71-113)||(2568538-2568580)
chr5 (53-103)||(8089008-8089057)
chr5 (89-126)||(4991070-4991107)
chr5 (64-113)||(10772019-10772068)
chr5 (134-187)||(39128575-39128628)
chr5 (64-113)||(42573920-42573969)
chr5 (143-195)||(11615453-11615505)
chr5 (134-178)||(13224365-13224409)
chr5 (59-107)||(32927972-32928020)
[»] chr8 (10 HSPs)
chr8 (64-113)||(2840239-2840288)
chr8 (64-113)||(2844926-2844975)
chr8 (137-241)||(7646145-7646249)
chr8 (143-242)||(30627928-30628027)
chr8 (138-218)||(926427-926508)
chr8 (62-112)||(8499085-8499135)
chr8 (135-181)||(34522143-34522189)
chr8 (136-202)||(38537530-38537595)
chr8 (58-115)||(4389818-4389875)
chr8 (65-113)||(31916462-31916510)
[»] chr6 (12 HSPs)
chr6 (129-241)||(4006645-4006757)
chr6 (142-186)||(24782003-24782047)
chr6 (122-237)||(4248882-4248997)
chr6 (139-241)||(33887771-33887873)
chr6 (127-186)||(29269825-29269884)
chr6 (131-186)||(29274311-29274366)
chr6 (53-107)||(7946020-7946074)
chr6 (137-241)||(24836229-24836330)
chr6 (136-186)||(33080664-33080714)
chr6 (129-186)||(33068643-33068700)
chr6 (131-222)||(4308499-4308588)
chr6 (66-118)||(33890664-33890716)
[»] chr4 (27 HSPs)
chr4 (57-116)||(17823012-17823071)
chr4 (64-111)||(26883875-26883922)
chr4 (59-118)||(47771871-47771930)
chr4 (135-240)||(50742864-50742967)
chr4 (136-241)||(45128337-45128442)
chr4 (129-186)||(50745931-50745988)
chr4 (62-110)||(6466174-6466222)
chr4 (114-186)||(41603474-41603545)
chr4 (64-112)||(45935365-45935412)
chr4 (59-111)||(47399409-47399461)
chr4 (122-181)||(47970242-47970301)
chr4 (135-241)||(6466073-6466179)
chr4 (129-187)||(9680595-9680653)
chr4 (71-113)||(10206040-10206082)
chr4 (64-110)||(30066910-30066956)
chr4 (135-169)||(38478679-38478713)
chr4 (64-118)||(39178371-39178425)
chr4 (64-110)||(43824181-43824227)
chr4 (137-186)||(42321961-42322010)
chr4 (137-186)||(52645831-52645880)
chr4 (136-181)||(53422300-53422345)
chr4 (127-171)||(4191668-4191712)
chr4 (60-96)||(11155555-11155591)
chr4 (64-116)||(35064735-35064787)
chr4 (64-112)||(39886715-39886763)
chr4 (138-221)||(42121427-42121511)
chr4 (57-109)||(45214251-45214303)
[»] chr3 (21 HSPs)
chr3 (59-120)||(9995850-9995911)
chr3 (59-120)||(10216867-10216928)
chr3 (59-120)||(10220386-10220447)
chr3 (138-258)||(24785145-24785266)
chr3 (136-241)||(47904090-47904195)
chr3 (127-183)||(16790441-16790497)
chr3 (135-241)||(44295469-44295572)
chr3 (115-170)||(25185910-25185965)
chr3 (59-114)||(48387445-48387500)
chr3 (128-179)||(50760544-50760595)
chr3 (136-185)||(139923-139972)
chr3 (59-120)||(10131536-10131597)
chr3 (144-181)||(43116515-43116552)
chr3 (59-96)||(46434750-46434787)
chr3 (64-113)||(46886838-46886886)
chr3 (64-120)||(10105724-10105780)
chr3 (58-118)||(28881843-28881903)
chr3 (56-96)||(31762198-31762238)
chr3 (53-97)||(34235233-34235276)
chr3 (136-172)||(34958266-34958302)
chr3 (137-241)||(36101507-36101611)
[»] scaffold0590 (1 HSPs)
scaffold0590 (127-181)||(1161-1215)
[»] scaffold0275 (1 HSPs)
scaffold0275 (127-181)||(2760-2814)
[»] scaffold0022 (1 HSPs)
scaffold0022 (135-172)||(143157-143194)


Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 11 - 258
Target Start/End: Original strand, 46945722 - 46945969
Alignment:
Q  11 attatactacaacatttaggccttgtttgaatcaaagggatttatttaggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttat 110  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46945722 attatactacaacatttagtccttgtttgaatcaaagggatttatttaggccttgtttggataaacaacttagtttgcagcttatagcttaagcgcttat 46945821  T
Q  111 catataagtgtttgtgatataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtctt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  46945822 catataagtgtttgtgatataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtttt 46945921  T
Q  211 cttaagctatcccgaagagcttatggaaatagataaaaacaatttatg 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46945922 cttaagctatcccgaagagcttatggaaatagataaaaacaatttatg 46945969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 241
Target Start/End: Original strand, 12110298 - 12110403
Alignment:
Q  136 cttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatg 235  Q
    ||||||||||| |||||| ||| |||||||||||||| || ||||||||||   |||||| ||||||  ||| ||| |||||||||  ||||| ||||||    
T  12110298 cttatgaataacctatttctattacacaagataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatg 12110397  T
Q  236 gaaata 241  Q
     |||||    
T  12110398 aaaata 12110403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 31341126 - 31341177
Alignment:
Q  130 taaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaa 181  Q
    |||||||||||| ||||||||||||||||||| |||||||||| || |||||    
T  31341126 taaatgcttatgtataagctatttgtataacaaaagataaaataaagtcaaa 31341177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 35536036 - 35536095
Alignment:
Q  127 atataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    ||||||| ||||||| ||||||||||| ||||||| |||||||||| || ||||||||||    
T  35536036 atataaaggcttatgtataagctatttctataacataagataaaataaagtcaaattgtt 35536095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 426018 - 425965
Alignment:
Q  57 taggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttat 110  Q
    |||||| |||||| ||||| |||||| ||||||||||||||| |||||||||||    
T  426018 taggccctgtttggataaataacttattttgcagcttatagcataagcgcttat 425965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 3610886 - 3610767
Alignment:
Q  122 ttgtgatataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatc 221  Q
    |||| |||||| |||||||| ||||||||||| || |||| |||||||||| ||  |||| ||||   |||||| |||||| |||| ||| ||| |||||    
T  3610886 ttgtcatataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaactatc 3610787  T
Q  222 ccgaagagcttatggaaata 241  Q
    |   ||||||||| ||||||    
T  3610786 ctagagagcttatagaaata 3610767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 241
Target Start/End: Original strand, 28165027 - 28165134
Alignment:
Q  134 tgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagctta 233  Q
    |||||||| ||||| | ||| ||||||| |||||||||| || ||||||||||    ||||| ||||||  ||||||  |||||||||  | ||||||||    
T  28165027 tgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagctta 28165126  T
Q  234 tggaaata 241  Q
    ||||||||    
T  28165127 tggaaata 28165134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 39169548 - 39169446
Alignment:
Q  135 gcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttat 234  Q
    ||||| |||||||||||||  || |||||||| ||||| || ||| | ||||  ||||||||||||||  ||| ||| |||||||||| | |||||||||    
T  39169548 gcttacgaataagctatttccattacacaagaaaaaatgaagtcagactgtttttgtataatctataaactgttttcataagctatcctg-agagcttat 39169450  T
Q  235 ggaa 238  Q
    ||||    
T  39169449 ggaa 39169446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 47795832 - 47795886
Alignment:
Q  58 aggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    |||||||||||  ||||||| |||| ||||||||||||||| ||||||||||||||    
T  47795832 aggccttgtttagataaacagctta-tttgcagcttatagcataagcgcttatcat 47795886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 7612346 - 7612388
Alignment:
Q  71 ataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    |||||||||||| ||||||||||||||| ||||| ||||||||    
T  7612346 ataaacaacttaatttgcagcttatagcataagcacttatcat 7612388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 31002992 - 31002946
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttat 110  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||    
T  31002992 tgtttggataaacaacttaatttgcatcttatagcataagcgcttat 31002946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 32156891 - 32156937
Alignment:
Q  66 tttgtataaacaacttagtttgcagcttatagcttaagcgcttatca 112  Q
    |||| |||||||||||| ||||||||||||||| ||| |||||||||    
T  32156891 tttggataaacaacttaatttgcagcttatagcataaacgcttatca 32156937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 48131229 - 48131283
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataag 118  Q
    |||||| ||| |||||||| ||||||||||| ||| |||| ||||||||||||||    
T  48131229 tgtttggatacacaacttattttgcagcttacagcataagtgcttatcatataag 48131283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 2013129 - 2013178
Alignment:
Q  128 tataaatgcttatgaataagctatttgtataacacaagataaaatcaaat 177  Q
    |||||||||||||| ||||  ||||| ||||||| |||||||||||||||    
T  2013129 tataaatgcttatgtataatttatttctataacaaaagataaaatcaaat 2013178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 41668243 - 41668206
Alignment:
Q  135 gcttatgaataagctatttgtataacacaagataaaat 172  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  41668243 gcttatgaataagctatttctataacccaagataaaat 41668206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 41668921 - 41668884
Alignment:
Q  135 gcttatgaataagctatttgtataacacaagataaaat 172  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  41668921 gcttatgaataagctatttctataacccaagataaaat 41668884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 18865249 - 18865190
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat-ataagtgttt 123  Q
    |||||| |||||||||||| |||||||||||||||  || |||||||||| ||||||||||    
T  18865249 tgtttggataaacaactta-tttgcagcttatagcacaaacgcttatcatgataagtgttt 18865190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 240
Target Start/End: Original strand, 45530459 - 45530563
Alignment:
Q  136 cttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatg 235  Q
    ||||||| |||||| ||| |  ||||||||||||| | |||||||| ||||  |||||||| || || |||| ||| ||| |||||| |||| | |||||    
T  45530459 cttatgactaagctttttatgaaacacaagataaattaaaatcaaactgtttgtgtataatataaaagttgttttcataatctatccggaagtgattatg 45530558  T
Q  236 gaaat 240  Q
    |||||    
T  45530559 gaaat 45530563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 46056081 - 46056037
Alignment:
Q  197 ctataatttgtcttcttaagctatcccgaagagcttatggaaata 241  Q
    |||||| |||| ||| |||||||||||| ||||||||||||||||    
T  46056081 ctataaattgttttcataagctatcccgtagagcttatggaaata 46056037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 4090289 - 4090392
Alignment:
Q  138 tatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatgga 237  Q
    ||||||||||||||||  ||||||||||||||||| || ||||||||||   ||||||||||||| |||| | | |||||||||||  |||||| |||||    
T  4090289 tatgaataagctatttccataacacaagataaaataaagtcaaattgtttcggtataatctataagttgtttacataagctatccctgagagctcatgga 4090388  T
Q  238 aata 241  Q
    ||||    
T  4090389 aata 4090392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 28933753 - 28933809
Alignment:
Q  127 atataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaatt 183  Q
    |||||| |||| ||| ||||||||||| ||||||| |||||||||||||||||||||    
T  28933753 atataagtgctcatgtataagctatttatataacaaaagataaaatcaaatcaaatt 28933809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 41817099 - 41817211
Alignment:
Q  129 ataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaaga 228  Q
    ||||||||||||||||||||||||| |||||||||||| ||| | ||| |||| | ||  |||||||| | |||  | | ||| ||| |||||| | |||    
T  41817099 ataaatgcttatgaataagctatttctataacacaagagaaattaaaagcaaactatttttgtataatgtgtaagctattttcataaactatcctggaga 41817198  T
Q  229 gcttatggaaata 241  Q
    |||||||||||||    
T  41817199 gcttatggaaata 41817211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 43259779 - 43259877
Alignment:
Q  143 ataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatggaaata 241  Q
    ||||||||||| |||||||||||||||||| || |||||| |||  ||||||||| | ||  ||| ||| | || ||||  ||||||||||||||||||    
T  43259779 ataagctatttctataacacaagataaaataaagtcaaatagtttttgtataatcaacaagctgttttcattaggtatcttgaagagcttatggaaata 43259877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 787275 - 787336
Alignment:
Q  142 aataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataat 203  Q
    |||||||||||| |||||||||||||||||| || |||| |||||  |||| ||||||||||    
T  787275 aataagctatttctataacacaagataaaataaagtcaacttgtttttgtaaaatctataat 787336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 258
Target Start/End: Original strand, 39621890 - 39622012
Alignment:
Q  135 gcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttat 234  Q
    ||||||||||||| ||||| |||||||||| ||||||| || ||||| | ||  ||||||||||||||  ||| ||| |||| ||||| ||  ||||||     
T  39621890 gcttatgaataagatatttctataacacaaaataaaataaagtcaaactttt--tgtataatctataagctgttttcataagttatccggacaagcttaa 39621987  T
Q  235 ggaaat-agataaaaacaatttatg 258  Q
    |||||| || | |||||||||||||    
T  39621988 ggaaataagctgaaaacaatttatg 39622012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 41880692 - 41880643
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    |||||| |||||||||||| |||||||||||||||  |||||||||||||    
T  41880692 tgtttggataaacaacttactttgcagcttatagcacaagcgcttatcat 41880643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 35459826 - 35459898
Alignment:
Q  114 ataagtgtttgtgatataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    |||||||||| | |||||| || || || |||||||||||||||| || |||||||||| || ||||||||||    
T  35459826 ataagtgtttatcatataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaaattgtt 35459898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 23143103 - 23143060
Alignment:
Q  143 ataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||    
T  23143103 ataagctatttttgtaacaaaagataaaatcaaatcaaattgtt 23143060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 23554893 - 23554850
Alignment:
Q  143 ataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||    
T  23554893 ataagctatttttgtaacaaaagataaaatcaaatcaaattgtt 23554850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 656902 - 656804
Alignment:
Q  143 ataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatggaaata 241  Q
    ||||||||||| ||||||| ||||||||||  ||||||||||||   |||||| || ||| |||  ||| |||||||||  | |||||||||| |||||    
T  656902 ataagctatttctataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaata 656804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 7928426 - 7928376
Alignment:
Q  136 cttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    |||||||||||||||||| |||  || |||||||||| |||||||||||||    
T  7928426 cttatgaataagctatttctattgcaaaagataaaattaaatcaaattgtt 7928376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 32821746 - 32821783
Alignment:
Q  135 gcttatgaataagctatttgtataacacaagataaaat 172  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  32821746 gcttatgaataagctatttttataacaaaagataaaat 32821783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 32098446 - 32098390
Alignment:
Q  130 taaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    |||||||||||  ||||||||||| ||||||| |||||||||| || ||||| ||||    
T  32098446 taaatgcttatatataagctatttctataacaaaagataaaataaagtcaaagtgtt 32098390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 35486494 - 35486390
Alignment:
Q  137 ttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatgg 236  Q
    |||||| |||||||||| |||| || ||| |||| | || ||||| ||||  ||||||||||||||  ||| |||  ||||||||| | |||| ||||||    
T  35486494 ttatgagtaagctatttctatagcagaaggtaaagtaaagtcaaactgtttttgtataatctataagctgttttcgcaagctatcctggagaggttatgg 35486395  T
Q  237 aaata 241  Q
    |||||    
T  35486394 aaata 35486390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 38239682 - 38239638
Alignment:
Q  137 ttatgaataagctatttgtataacacaagataaaatcaaatcaaa 181  Q
    ||||| ||||||||||| ||||||| ||||||||||||| |||||    
T  38239682 ttatgtataagctatttctataacaaaagataaaatcaagtcaaa 38239638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 41407023 - 41407099
Alignment:
Q  146 agctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcc 222  Q
    |||||||| |||||||||||||||||| || | ||| || |  |||||| ||||||| |||| ||| ||||||||||    
T  41407023 agctatttctataacacaagataaaataaagttaaactgcttttgtatattctataagttgttttcataagctatcc 41407099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 3924565 - 3924667
Alignment:
Q  139 atgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatggaa 238  Q
    ||||| ||||||||| |||||||||||||||||||||  |||| ||||   ||||||||||| | |||| ||  |||||||||| |||||| ||||||||    
T  3924565 atgaaaaagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctgaagagtttatggaa 3924664  T
Q  239 ata 241  Q
    |||    
T  3924665 ata 3924667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 48064181 - 48064238
Alignment:
Q  56 ttaggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    ||||||| |||||| |||||||||||| ||||||||||||||| ||||| ||||||||    
T  48064181 ttaggccatgtttggataaacaacttaatttgcagcttatagcataagcccttatcat 48064238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 219678 - 219579
Alignment:
Q  137 ttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatgg 236  Q
    ||||||||||| ||| ||||||||| |||||||||| ||||||||  |    |||||| ||||||| |||| | | |||||| ||| |||||||||||||    
T  219678 ttatgaataagttatatgtataacataagataaaataaaatcaaacag----tgtatagtctataagttgtttacataagctgtcctgaagagcttatgg 219583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 10280522 - 10280568
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttat 110  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||    
T  10280522 tgtttggataaacaacttagtttacagcttatagcataagcgcttat 10280568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 10744188 - 10744237
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    ||||||||||||||||||| ||  ||||||||||| ||||||||||||||    
T  10744188 tgtttgtataaacaacttaattctcagcttatagcataagcgcttatcat 10744237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 27820529 - 27820481
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  27820529 tgtttggataaacaactta-tttgcagcttatagcataagcgcttatcat 27820481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 45667888 - 45667835
Alignment:
Q  122 ttgtgatataaatgcttatgaataagctatttgtataacacaagataaaatcaa 175  Q
    |||| ||||||||||||||||||||| ||||| ||| |||||||||||| ||||    
T  45667888 ttgttatataaatgcttatgaataagttatttttattacacaagataaagtcaa 45667835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 241
Target Start/End: Original strand, 35017512 - 35017619
Alignment:
Q  136 cttatgaataagctatttgtataacacaagataaaatcaaatcaa--attgttcatgtataatctataatttgtcttcttaagctatcccgaagagctta 233  Q
    |||||||||||||||||| ||||| |||||||||||| || ||||  | ||||   ||||||||||||   ||| ||| |||||| ||| | ||||||||    
T  35017512 cttatgaataagctatttttataatacaagataaaataaagtcaaacactgttttcgtataatctatatgctgttttcataagctgtcctggagagctta 35017611  T
Q  234 tggaaata 241  Q
    ||||||||    
T  35017612 tggaaata 35017619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 11560674 - 11560631
Alignment:
Q  143 ataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    ||||||||||| |||| || ||||||||||||||||||||||||    
T  11560674 ataagctatttttatagcaaaagataaaatcaaatcaaattgtt 11560631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 13037788 - 13037843
Alignment:
Q  122 ttgtgatataaatgcttatgaataagctatttgtataacacaagataaaatcaaat 177  Q
    |||| |||||| |||||||| ||||||||||| ||||||| |||||||| ||||||    
T  13037788 ttgtcatataagtgcttatgtataagctatttctataacaaaagataaagtcaaat 13037843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 40304207 - 40304136
Alignment:
Q  115 taagtgtttgtgatataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    ||||||||| | |||| | |||||| | ||||||||||| ||||||| |||||||||| |||||| ||||||    
T  40304207 taagtgtttatcatattattgcttaggtataagctatttatataacaaaagataaaataaaatcacattgtt 40304136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 36070146 - 36070192
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttat 110  Q
    |||||||||||||| | || ||||||||||||||| |||||||||||    
T  36070146 tgtttgtataaacagcctaatttgcagcttatagcataagcgcttat 36070192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 48748460 - 48748422
Alignment:
Q  134 tgcttatgaataagctatttgtataacacaagataaaat 172  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  48748460 tgcttatgaatgagctatttatataacacaagataaaat 48748422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 117
Target Start/End: Complemental strand, 47885177 - 47885144
Alignment:
Q  84 tttgcagcttatagcttaagcgcttatcatataa 117  Q
    ||||||||||||||| ||||||||||||||||||    
T  47885177 tttgcagcttatagcataagcgcttatcatataa 47885144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 1725285 - 1725245
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagc 104  Q
    ||||||||||||||||||| |||| |||||||||| |||||    
T  1725285 tgtttgtataaacaacttaatttggagcttatagcataagc 1725245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 4549797 - 4549853
Alignment:
Q  129 ataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgt 185  Q
    ||||||||||||| | ||||||||| ||||||| |||||||||| || | |||||||    
T  4549797 ataaatgcttatgtacaagctatttctataacaaaagataaaataaagttaaattgt 4549853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 7274093 - 7274021
Alignment:
Q  114 ataagtgtttgtgatataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    ||||||| || | ||||||||||||||| ||| | ||||| ||||||| ||||| |||| || ||||||||||    
T  7274093 ataagtgcttatcatataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgtt 7274021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 10799339 - 10799391
Alignment:
Q  61 ccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    ||||||||||||||||||||||  ||||| | |||| | ||||||||||||||    
T  10799339 ccttgtttgtataaacaacttaaattgcatcatataacataagcgcttatcat 10799391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 51688572 - 51688635
Alignment:
Q  60 gccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat-ataagtgttt 123  Q
    |||||||||| |||||||||||| ||||||||||||||   ||| ||||||||| ||||||||||    
T  51688572 gccttgtttggataaacaactta-tttgcagcttatagtacaagtgcttatcatgataagtgttt 51688635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 3951937 - 3951883
Alignment:
Q  125 tgatataaatgcttatgaataagctatttgtataacacaagataaaatcaaatca 179  Q
    |||||||| |||||||||||||||||||| ||||||| |||||||||| ||||||    
T  3951937 tgatataagtgcttatgaataagctatttatataacaaaagataaaatgaaatca 3951883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 26807406 - 26807470
Alignment:
Q  59 ggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataagtgttt 123  Q
    |||| |||||| |||||||||||| |||||| ||||| || |||||||||| |||||||||||||    
T  26807406 ggccctgtttggataaacaacttattttgcaccttatcgcataagcgcttaccatataagtgttt 26807470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 38105063 - 38104999
Alignment:
Q  54 atttaggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataag 118  Q
    |||| |||| |||||| |||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  38105063 atttgggccctgtttggataaacaacttattttgcagcttatagcgtaagcgtttatgatataag 38104999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 18857531 - 18857466
Alignment:
Q  137 ttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataa 202  Q
    |||||||||||||||||  |||||||| |||||||| || ||||||||||  | ||||||||||||    
T  18857531 ttatgaataagctatttcaataacacacgataaaataaagtcaaattgtttttctataatctataa 18857466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 26796338 - 26796399
Alignment:
Q  59 ggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataagtg 120  Q
    |||| |||||| |||||||||||| |||||| ||||| || |||||||||| ||||||||||    
T  26796338 ggccctgtttggataaacaacttattttgcaccttatcgcataagcgcttaccatataagtg 26796399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 26799856 - 26799917
Alignment:
Q  59 ggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataagtg 120  Q
    |||| |||||| |||||||||||| |||||| ||||| || |||||||||| ||||||||||    
T  26799856 ggccctgtttggataaacaacttattttgcaccttatcgcataagcgcttaccatataagtg 26799917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 241
Target Start/End: Original strand, 17368611 - 17368719
Alignment:
Q  133 atgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagctt 232  Q
    ||||||| |||||||||||||  ||||||||  || |||| || ||||| ||||  ||| |||||||||| |||| ||| |||||||||  | |||| ||    
T  17368611 atgcttaggaataagctatttcaataacacagtattaaatgaagtcaaactgtttttgtgtaatctataagttgttttcataagctatcttggagaggtt 17368710  T
Q  233 atggaaata 241  Q
    |||||||||    
T  17368711 atggaaata 17368719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 28776846 - 28776904
Alignment:
Q  54 atttaggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    ||||||||  |||||| |||||||||||| ||||||||||||||| ||||| ||||||||    
T  28776846 atttaggctctgtttggataaacaactta-tttgcagcttatagcctaagcacttatcat 28776904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 32849079 - 32849130
Alignment:
Q  53 tatttaggccttgtttgtataaacaacttagtttgcagcttatagcttaagc 104  Q
    ||||||||||||||||| |||| || |||| ||||||||||||||| |||||    
T  32849079 tatttaggccttgtttggataagcatcttattttgcagcttatagcataagc 32849130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 185
Target Start/End: Original strand, 32897397 - 32897444
Alignment:
Q  138 tatgaataagctatttgtataacacaagataaaatcaaatcaaattgt 185  Q
    |||| ||||||||||| | ||||| |||||||||||||||||||||||    
T  32897397 tatgtataagctatttatgtaacaaaagataaaatcaaatcaaattgt 32897444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 37063220 - 37063161
Alignment:
Q  122 ttgtgatataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaa 181  Q
    |||| ||||||||||||||| |||| |||||| ||||||| |||||||||| || |||||    
T  37063220 ttgtcatataaatgcttatgtataaactatttctataacaaaagataaaataaagtcaaa 37063161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 2568538 - 2568580
Alignment:
Q  71 ataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    ||||||||||||||| |||||||||||||||||  ||||||||    
T  2568538 ataaacaacttagttagcagcttatagcttaagtacttatcat 2568580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 8089008 - 8089057
Alignment:
Q  53 tatttaggccttgtttgtataaacaacttagtttgcagcttatagcttaag 103  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||| ||||    
T  8089008 tatttatgccttgtttg-ataaacaacttaatttgcagcttatagcgtaag 8089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 4991107 - 4991070
Alignment:
Q  89 agcttatagcttaagcgcttatcatataagtgtttgtg 126  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  4991107 agcttatagcataagcgattatcatataagtgtttgtg 4991070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 10772068 - 10772019
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    |||||| ||| |||||||| ||||||||||||||| |||| |||||||||    
T  10772068 tgtttgaatatacaacttaatttgcagcttatagcataagtgcttatcat 10772019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 39128575 - 39128628
Alignment:
Q  134 tgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttc 187  Q
    |||||||| |||||||| || ||||||| |||||||||| || |||||||||||    
T  39128575 tgcttatgtataagctaattctataacaaaagataaaataaagtcaaattgttc 39128628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 42573969 - 42573920
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    |||||| ||||||| |||| ||||||||||||||| | ||||||||||||    
T  42573969 tgtttggataaacagcttaatttgcagcttatagcctgagcgcttatcat 42573920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 11615453 - 11615505
Alignment:
Q  143 ataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataa 195  Q
    ||||||||||| ||||||| |||||||||| || |||||||||| | ||||||    
T  11615453 ataagctatttttataacaaaagataaaataaagtcaaattgtttacgtataa 11615505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 13224365 - 13224409
Alignment:
Q  134 tgcttatgaataagctatttgtataacacaagataaaatcaaatc 178  Q
    |||||||| ||||||||||| ||||||| |||||||||| |||||    
T  13224365 tgcttatgtataagctatttctataacaaaagataaaataaaatc 13224409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 32927972 - 32928020
Alignment:
Q  59 ggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgct 107  Q
    |||| |||||| |||||||||||| ||||||||||||| | ||||||||    
T  32927972 ggccctgtttgaataaacaacttaatttgcagcttatatcataagcgct 32928020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 2840239 - 2840288
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  2840239 tgtttgtataaacaacttattttgcagcttatagcataagtgcttatcat 2840288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 2844926 - 2844975
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  2844926 tgtttgtataaacaacttattttgcagcttatagcataagtgcttatcat 2844975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 7646145 - 7646249
Alignment:
Q  137 ttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatgg 236  Q
    ||||| ||||||||||| ||||| | ||| |||||| || | ||||||||  ||||||||||||||  ||||||| ||||||  || | |||||||||||    
T  7646145 ttatgtataagctatttctataagaaaaggtaaaataaagttaaattgtttttgtataatctataaactgtcttcataagctgaccaggagagcttatgg 7646244  T
Q  237 aaata 241  Q
    |||||    
T  7646245 aaata 7646249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 30628027 - 30627928
Alignment:
Q  143 ataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatggaaatag 242  Q
    ||||||||||| | ||||| |||||||||| |||| |||||||| |||| ||| |||||| |||| ||| |||| ||||    |||||||||||||||||    
T  30628027 ataagctatttctgtaacaaaagataaaataaaataaaattgtttatgtgtaagctataagttgttttcataagttatcttagagagcttatggaaatag 30627928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 926427 - 926508
Alignment:
Q  138 tatgaataagctatttgtataacacaagataaaatcaaatc-aaattgttcatgtataatctataatttgtcttcttaagct 218  Q
    |||||||||||||||| |||||||||||||||||| || || ||| ||||  ||||| |||||||| |||| ||| ||||||    
T  926427 tatgaataagctatttctataacacaagataaaataaagtcaaaactgtttttgtattatctataagttgttttcataagct 926508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 8499085 - 8499135
Alignment:
Q  62 cttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatca 112  Q
    |||||||| |||||||||||| |||||| |||||||  |||||||||||||    
T  8499085 cttgtttggataaacaacttaatttgcaacttatagtataagcgcttatca 8499135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 34522189 - 34522143
Alignment:
Q  135 gcttatgaataagctatttgtataacacaagataaaatcaaatcaaa 181  Q
    ||||||||||||||||||| ||| |||||||||||||| || |||||    
T  34522189 gcttatgaataagctatttctatgacacaagataaaataaagtcaaa 34522143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 38537530 - 38537595
Alignment:
Q  136 cttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataa 202  Q
    |||||||||| | ||||| |||||||||||||||||| || |||| |||||  ||||||||||||||    
T  38537530 cttatgaataggatattt-tataacacaagataaaatgaagtcaatttgtttttgtataatctataa 38537595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 4389818 - 4389875
Alignment:
Q  58 aggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatat 115  Q
    ||||| |||||| ||||| |||||| |||||||||||||||  ||| |||||||||||    
T  4389818 aggccctgtttggataaataacttattttgcagcttatagcagaagtgcttatcatat 4389875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 31916462 - 31916510
Alignment:
Q  65 gtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    ||||| |||||||||||  |||||||||||| || ||||||||||||||    
T  31916462 gtttgaataaacaacttcatttgcagcttatggcataagcgcttatcat 31916510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 4006645 - 4006757
Alignment:
Q  129 ataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaaga 228  Q
    |||| |||||||| ||||| ||||| ||||||| | |||||||| || ||||||||||  | ||||| |||||| |||| ||| |||||||||||  |||    
T  4006645 ataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgaga 4006744  T
Q  229 gcttatggaaata 241  Q
    | ||||| |||||    
T  4006745 ggttatgaaaata 4006757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 24782003 - 24782047
Alignment:
Q  142 aataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  24782003 aataagctatttctataacaaaagataaaatcaaatcaaattgtt 24782047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 4248882 - 4248997
Alignment:
Q  122 ttgtgatataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatc 221  Q
    |||| |||||| |||||||  |||||||||||  |||||| |||||||||| || |||||||| |  ||||||| | ||||  ||| ||| |||||||||    
T  4248882 ttgtcatataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaaattgattttgtataaacaataaggtgttttcctaagctatc 4248981  T
Q  222 ccgaagagcttatgga 237  Q
     || ||||||||||||    
T  4248982 tcggagagcttatgga 4248997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 33887771 - 33887873
Alignment:
Q  139 atgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatggaa 238  Q
    ||||||||| ||||| |||||||||||||||||  || ||||| ||||   |||||||| ||||  ||| ||| |||||||||| |||  ||||||||||    
T  33887771 atgaataagatatttttataacacaagataaaacaaactcaaactgttttagtataatcaataaactgttttcataagctatcctgaaatgcttatggaa 33887870  T
Q  239 ata 241  Q
    |||    
T  33887871 ata 33887873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 29269825 - 29269884
Alignment:
Q  127 atataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    |||||||||||| || |||| |||||| ||||||| |||||||||| || ||||||||||    
T  29269825 atataaatgcttgtgtataaactatttctataacagaagataaaataaagtcaaattgtt 29269884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 29274366 - 29274311
Alignment:
Q  131 aaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    ||||||||||| ||||||||||| |||| || |||||||||| || ||||||||||    
T  29274366 aaatgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgtt 29274311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 7946074 - 7946020
Alignment:
Q  53 tatttaggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgct 107  Q
    |||||| ||| |||||| |||||||||||| |||| |||||||||| ||||||||    
T  7946074 tatttaagccctgtttggataaacaacttattttgtagcttatagcataagcgct 7946020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 24836330 - 24836229
Alignment:
Q  137 ttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatgg 236  Q
    ||||| ||||| ||||| ||||||| |||||||||| || ||||||||||   |||||| |||||| ||   ||| |||||||||  | |||||||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataagtt---ttcgtaagctatcatggagagcttatgg 24836234  T
Q  237 aaata 241  Q
    |||||    
T  24836233 aaata 24836229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 33080714 - 33080664
Alignment:
Q  136 cttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    |||||||||||||| ||| ||||||||| |||||| |||| ||||||||||    
T  33080714 cttatgaataagctttttctataacacaggataaattcaagtcaaattgtt 33080664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 33068700 - 33068643
Alignment:
Q  129 ataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    ||||||||||||| ||||| ||||| ||||||| |||||||||| | |||||| ||||    
T  33068700 ataaatgcttatgtataagttatttctataacaaaagataaaataatatcaaactgtt 33068643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 4308499 - 4308588
Alignment:
Q  131 aaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcc 222  Q
    |||||||||||||||| |||| |  |||| |||||||||| | || ||||||||||  ||| || ||||||| |||| ||| ||||||||||    
T  4308499 aaatgcttatgaataaactatctccataaaacaagataaattaaagtcaaattgtt--tgtctagtctataagttgttttcataagctatcc 4308588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 33890664 - 33890716
Alignment:
Q  66 tttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataag 118  Q
    |||| ||||| |||||| ||||||||||||||| ||| | |||||||||||||    
T  33890664 tttggataaataacttattttgcagcttatagcataaacacttatcatataag 33890716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 17823012 - 17823071
Alignment:
Q  57 taggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatata 116  Q
    ||||||||||||| ||||||| |||| ||||||||| ||||| |||| ||||||||||||    
T  17823012 taggccttgtttggataaacagcttaatttgcagctcatagcataagggcttatcatata 17823071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 26883875 - 26883922
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatc 111  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  26883875 tgtttgtataaacaacttaatttgcagcatatagcataagcgcttatc 26883922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 47771871 - 47771930
Alignment:
Q  59 ggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataag 118  Q
    |||| |||||| ||||||| |||| |||| |||||||||| |||||||||||||||||||    
T  47771871 ggccctgtttggataaacagcttattttggagcttatagcataagcgcttatcatataag 47771930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 50742967 - 50742864
Alignment:
Q  135 gcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttat 234  Q
    ||||||| ||||||||||| |||||||||| ||||||| || ||  ||||||  ||||||||  |||| |||| ||| |||||||||| | |||||||||    
T  50742967 gcttatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagctatcctggagagcttat 50742870  T
Q  235 ggaaat 240  Q
    | ||||    
T  50742869 gaaaat 50742864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 45128442 - 45128337
Alignment:
Q  136 cttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatg 235  Q
    |||||| |||| |||||| ||||||| ||||||||||||||||||||| |||   ||||| |||||| |||| ||| ||| || |||   | ||||||||    
T  45128442 cttatgtataaactatttctataacaaaagataaaatcaaatcaaattattctcatataagctataaattgttttcataaactgtcctataaagcttatg 45128343  T
Q  236 gaaata 241  Q
    ||||||    
T  45128342 gaaata 45128337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 50745931 - 50745988
Alignment:
Q  129 ataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    |||||||||||||  |||||||||| ||||||| |||||||||| |||||||| ||||    
T  50745931 ataaatgcttatgtctaagctatttttataacaaaagataaaataaaatcaaactgtt 50745988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 6466222 - 6466174
Alignment:
Q  62 cttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttat 110  Q
    |||||||| |||||||||||  ||||||||||||||| |||||||||||    
T  6466222 cttgtttggataaacaacttcttttgcagcttatagcgtaagcgcttat 6466174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 41603545 - 41603474
Alignment:
Q  114 ataagtgtttgtgatataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    |||| ||||||| |||||| |||||||| ||||||||||| ||||||| |||| ||||| |||| ||||||||    
T  41603545 ataaatgtttgtcatataagtgcttatgtataagctatttatataacataagaaaaaat-aaattaaattgtt 41603474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 45935412 - 45935365
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatca 112  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||||||    
T  45935412 tgtttggataaacaactta-tttgcagcttatagctcaagcgcttatca 45935365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 47399409 - 47399461
Alignment:
Q  59 ggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatc 111  Q
    |||| |||||| |||||||||||||||||||||||||||  |||||| |||||    
T  47399409 ggccctgtttggataaacaacttagtttgcagcttataggataagcgtttatc 47399461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 47970242 - 47970301
Alignment:
Q  122 ttgtgatataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaa 181  Q
    |||| |||||| |||||||| ||||||||||| ||||||| |||||||||| || |||||    
T  47970242 ttgtcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaa 47970301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 6466179 - 6466073
Alignment:
Q  135 gcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttat 234  Q
    ||||||||||||| | ||| ||||||||||||| |||| || | ||||| ||  |||||||||||||| |||| | | |||||||| |   |||| ||||    
T  6466179 gcttatgaataagttgtttatataacacaagatcaaataaagtgaaattctttttgtataatctataagttgtttccataagctattctagagagattat 6466080  T
Q  235 ggaaata 241  Q
    |||||||    
T  6466079 ggaaata 6466073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 9680595 - 9680653
Alignment:
Q  129 ataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttc 187  Q
    ||||||||||||| |||||||||||  |||| | |||||||||| || |||||||||||    
T  9680595 ataaatgcttatgtataagctatttcgataataaaagataaaataaagtcaaattgttc 9680653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 10206082 - 10206040
Alignment:
Q  71 ataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  10206082 ataaacaacttaatttgcagcttacagcttaagcacttatcat 10206040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 30066956 - 30066910
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttat 110  Q
    |||||| |||||||| ||| ||||||||||||||| |||||||||||    
T  30066956 tgtttgcataaacaatttaatttgcagcttatagcataagcgcttat 30066910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 38478679 - 38478713
Alignment:
Q  135 gcttatgaataagctatttgtataacacaagataa 169  Q
    ||||||||||||||||||| |||||||||||||||    
T  38478679 gcttatgaataagctatttctataacacaagataa 38478713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 39178425 - 39178371
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataag 118  Q
    |||||| |||||||||||| ||| ||||||||||  |||| ||||||||||||||    
T  39178425 tgtttggataaacaacttattttacagcttatagtataagtgcttatcatataag 39178371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 43824181 - 43824227
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttat 110  Q
    ||||||| ||||||||||| ||||||||||||||| ||| |||||||    
T  43824181 tgtttgtttaaacaacttaatttgcagcttatagcataaccgcttat 43824227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 42322010 - 42321961
Alignment:
Q  137 ttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    ||||||||||||||||| ||||||| | |||||||| || ||||||||||    
T  42322010 ttatgaataagctatttttataacaaatgataaaataaagtcaaattgtt 42321961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 52645880 - 52645831
Alignment:
Q  137 ttatgaataagctatttgtataacacaagataaaatcaaatcaaattgtt 186  Q
    ||||| ||||||||||| ||||||| ||||||||||||| ||||| ||||    
T  52645880 ttatgtataagctatttctataacaaaagataaaatcaattcaaactgtt 52645831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 53422300 - 53422345
Alignment:
Q  136 cttatgaataagctatttgtataacacaagataaaatcaaatcaaa 181  Q
    |||||||||||||||||| || ||||||||||||||| || |||||    
T  53422300 cttatgaataagctatttctacaacacaagataaaataaattcaaa 53422345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 4191668 - 4191712
Alignment:
Q  127 atataaatgcttatgaataagctatttgtataacacaagataaaa 171  Q
    |||||| |||||||| ||||||||||| ||||||| |||||||||    
T  4191668 atataagtgcttatgtataagctatttctataacaaaagataaaa 4191712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 11155591 - 11155555
Alignment:
Q  60 gccttgtttgtataaacaacttagtttgcagcttata 96  Q
    |||||||||| |||||||||||| |||||||||||||    
T  11155591 gccttgtttggataaacaacttactttgcagcttata 11155555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 35064735 - 35064787
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatata 116  Q
    |||||| |||||||||||| ||||||  |||||||  ||||||||||||||||    
T  35064735 tgtttggataaacaacttaatttgcaatttatagcaaaagcgcttatcatata 35064787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 39886763 - 39886715
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatca 112  Q
    |||||| |||||||| ||| ||||||||||||||| ||| |||||||||    
T  39886763 tgtttggataaacaaattattttgcagcttatagcataaacgcttatca 39886715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 221
Target Start/End: Original strand, 42121427 - 42121511
Alignment:
Q  138 tatgaataagctatttgtataacacaagataaaatcaaatcaaa-ttgttcatgtataatctataatttgtcttcttaagctatc 221  Q
    |||||||||||||||| ||| |||| ||||||||| |||| ||| |||||  ||||||| |||||| |||| ||| | |||||||    
T  42121427 tatgaataagctatttctattacactagataaaataaaataaaatttgtttctgtataagctataagttgttttcatgagctatc 42121511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 45214251 - 45214303
Alignment:
Q  57 taggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgctta 109  Q
    |||||| |||||| |||||||||||| ||||| ||||| ||| ||||||||||    
T  45214251 taggccatgtttgaataaacaacttaatttgcggcttaaagcataagcgctta 45214303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000004; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 9995850 - 9995911
Alignment:
Q  59 ggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataagtg 120  Q
    |||| |||||| |||||||||||| |||||| ||||| || |||||||||| ||||||||||    
T  9995850 ggccctgtttggataaacaacttattttgcaccttatcgcataagcgcttaccatataagtg 9995911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 10216867 - 10216928
Alignment:
Q  59 ggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataagtg 120  Q
    |||| |||||| |||||||||||| |||||| ||||| || |||||||||| ||||||||||    
T  10216867 ggccctgtttggataaacaacttattttgcaccttatcgcataagcgcttaccatataagtg 10216928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 10220386 - 10220447
Alignment:
Q  59 ggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataagtg 120  Q
    |||| |||||| |||||||||||| |||||| ||||| || |||||||||| ||||||||||    
T  10220386 ggccctgtttggataaacaacttattttgcaccttatcgcataagcgcttaccatataagtg 10220447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 24785145 - 24785266
Alignment:
Q  138 tatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatgga 237  Q
    ||||||||| |||||| || | ||||||||||||| || ||||  ||||  ||||||||||||||  ||| ||| ||||||||||   |||||||||| |    
T  24785145 tatgaataacctatttctaaatcacaagataaaataaagtcaatctgtttttgtataatctataacgtgttttcataagctatcctcgagagcttatgta 24785244  T
Q  238 aat-agataaaaacaatttatg 258  Q
    ||| || ||||||||| |||||    
T  24785245 aataagctaaaaacaacttatg 24785266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 47904195 - 47904090
Alignment:
Q  136 cttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatg 235  Q
    |||||||||||||||||| |||||| ||| ||||||| |||||||  | ||    |||||||||||| | || ||| |||||||||  |||||||||| |    
T  47904195 cttatgaataagctatttctataacgcaacataaaatgaaatcaagctattttcatataatctataagtggttttcataagctatcgtgaagagcttacg 47904096  T
Q  236 gaaata 241  Q
    ||||||    
T  47904095 gaaata 47904090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 16790497 - 16790441
Alignment:
Q  127 atataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaatt 183  Q
    |||||| |||||||| ||||||||||| |||||||  ||||||||| ||||||||||    
T  16790497 atataagtgcttatgtataagctatttttataacaacagataaaataaaatcaaatt 16790441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 44295469 - 44295572
Alignment:
Q  135 gcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttat 234  Q
    |||| |||||||||||||| |||||| ||||||||||| ||||||   | ||  | |||||||||||| |||| ||| |||| |||  || |||||||||    
T  44295469 gcttgtgaataagctatttctataactcaagataaaataaaatca---tttttttttataatctataagttgttttcataagatatatcggagagcttat 44295565  T
Q  235 ggaaata 241  Q
    |||||||    
T  44295566 ggaaata 44295572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 25185910 - 25185965
Alignment:
Q  115 taagtgtttgtgatataaatgcttatgaataagctatttgtataacacaagataaa 170  Q
    ||||||||| | |||||| |||||||||||||| ||||| ||||||| ||||||||    
T  25185910 taagtgtttatcatataagtgcttatgaataagatatttatataacaaaagataaa 25185965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 48387500 - 48387445
Alignment:
Q  59 ggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcata 114  Q
    ||||||||||| |||||||||||| |||||| |||||| | |||||||||| ||||    
T  48387500 ggccttgtttggataaacaacttattttgcatcttataacataagcgcttaccata 48387445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 50760544 - 50760595
Alignment:
Q  128 tataaatgcttatgaataagctatttgtataacacaagataaaatcaaatca 179  Q
    ||||| |||||||||||||||||||| ||| || ||||||||||| ||||||    
T  50760544 tataagtgcttatgaataagctatttctatgactcaagataaaataaaatca 50760595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 139923 - 139972
Alignment:
Q  136 cttatgaataagctatttgtataacacaagataaaatcaaatcaaattgt 185  Q
    |||||||||||||||||| ||| |||||||||||||| || | |||||||    
T  139923 cttatgaataagctatttctattacacaagataaaataaagtaaaattgt 139972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 10131536 - 10131597
Alignment:
Q  59 ggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataagtg 120  Q
    |||| |||||| |||||||||||| |||||| ||||| || |||||||||| | ||||||||    
T  10131536 ggccctgtttggataaacaacttattttgcatcttattgcataagcgcttaccgtataagtg 10131597  T

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Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 43116552 - 43116515
Alignment:
Q  144 taagctatttgtataacacaagataaaatcaaatcaaa 181  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  43116552 taagctatttctataacaaaagataaaatcaaatcaaa 43116515  T

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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 46434787 - 46434750
Alignment:
Q  59 ggccttgtttgtataaacaacttagtttgcagcttata 96  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  46434787 ggccttgtttggataaacaacttattttgcagcttata 46434750  T

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Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 46886886 - 46886838
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcat 113  Q
    |||||| |||||||||||| ||||||||||||||| |||| |||||||||    
T  46886886 tgtttggataaacaactta-tttgcagcttatagcataagtgcttatcat 46886838  T

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Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 10105724 - 10105780
Alignment:
Q  64 tgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataagtg 120  Q
    |||||| |||||||||||| |||||| |||||  | |||||||||| ||||||||||    
T  10105724 tgtttggataaacaacttattttgcaccttatctcataagcgcttaccatataagtg 10105780  T

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Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 28881903 - 28881843
Alignment:
Q  58 aggccttgtttgtataaacaacttagtttgcagcttatagcttaagcgcttatcatataag 118  Q
    ||||| ||||||  |||||| ||| |||||||||||||||| ||||  |||||||||||||    
T  28881903 aggccctgtttgggtaaacagcttggtttgcagcttatagcataagaacttatcatataag 28881843  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 31762198 - 31762238
Alignment:
Q  56 ttaggccttgtttgtataaacaacttagtttgcagcttata 96  Q
    ||||| |||||||| |||||||||||| |||||||||||||    
T  31762198 ttaggtcttgtttggataaacaacttaatttgcagcttata 31762238  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 34235276 - 34235233
Alignment:
Q  53 tatttaggccttgtttgtataaacaacttagtttgcagcttatag 97  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||    
T  34235276 tatttaggccttgtttggataaacaactta-tttgtagcttatag 34235233  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 34958266 - 34958302
Alignment:
Q  136 cttatgaataagctatttgtataacacaagataaaat 172  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  34958266 cttatgaataaactatttctataacacaagataaaat 34958302  T

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Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 36101507 - 36101611
Alignment:
Q  137 ttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgtcttcttaagctatcccgaagagcttatgg 236  Q
    ||||||||||||||||| | ||| | |||||||||| || ||||| || |   ||||||||||||| |||| |  |||  |||||| ||||||||||||     
T  36101507 ttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataatctataagttgtttcattatactatcctgaagagcttatga 36101606  T
Q  237 aaata 241  Q
    |||||    
T  36101607 aaata 36101611  T

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Target: scaffold0590 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 1215 - 1161
Alignment:
Q  127 atataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaa 181  Q
    |||||| |||||||| ||||||||||| ||||||| |||||||||| || |||||    
T  1215 atataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaa 1161  T

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Target: scaffold0275 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 2760 - 2814
Alignment:
Q  127 atataaatgcttatgaataagctatttgtataacacaagataaaatcaaatcaaa 181  Q
    |||||| |||||||| ||||||||||| ||||||| |||||||||| || |||||    
T  2760 atataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaa 2814  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 143194 - 143157
Alignment:
Q  135 gcttatgaataagctatttgtataacacaagataaaat 172  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  143194 gcttatgaattagctatttctataacacaagataaaat 143157  T

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