View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3711_low_19 (Length: 339)

Name: NF3711_low_19
Description: NF3711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3711_low_19
NF3711_low_19
[»] chr2 (69 HSPs)
chr2 (23-172)||(35163119-35163268)
chr2 (23-172)||(39846340-39846489)
chr2 (23-172)||(44796852-44797001)
chr2 (23-172)||(39841288-39841437)
chr2 (189-307)||(12848467-12848585)
chr2 (189-293)||(24389632-24389736)
chr2 (206-305)||(33068540-33068639)
chr2 (194-295)||(33454966-33455067)
chr2 (210-314)||(431621-431726)
chr2 (194-293)||(6083911-6084010)
chr2 (194-296)||(6334678-6334780)
chr2 (207-296)||(12205530-12205620)
chr2 (194-288)||(565706-565802)
chr2 (196-281)||(8964392-8964477)
chr2 (207-304)||(30523014-30523111)
chr2 (210-305)||(42342487-42342581)
chr2 (194-304)||(33634796-33634906)
chr2 (196-309)||(6411367-6411480)
chr2 (214-307)||(32066740-32066833)
chr2 (196-304)||(9049148-9049256)
chr2 (189-305)||(3074073-3074187)
chr2 (184-281)||(2825977-2826074)
chr2 (194-271)||(4654992-4655069)
chr2 (191-310)||(9448450-9448570)
chr2 (194-310)||(21277551-21277666)
chr2 (207-314)||(40874826-40874934)
chr2 (194-277)||(12762896-12762979)
chr2 (207-258)||(30822764-30822815)
chr2 (189-295)||(13538389-13538495)
chr2 (194-312)||(29685694-29685812)
chr2 (189-275)||(30869589-30869673)
chr2 (194-298)||(18043839-18043942)
chr2 (206-304)||(11385462-11385561)
chr2 (231-309)||(28695605-28695684)
chr2 (194-312)||(2796517-2796626)
chr2 (211-288)||(27692744-27692822)
chr2 (190-244)||(28858098-28858152)
chr2 (189-278)||(3882609-3882698)
chr2 (242-311)||(5961954-5962023)
chr2 (194-283)||(11944892-11944981)
chr2 (207-291)||(37284896-37284981)
chr2 (225-305)||(10183219-10183299)
chr2 (195-282)||(9153494-9153581)
chr2 (237-288)||(15806054-15806105)
chr2 (189-283)||(41543970-41544065)
chr2 (207-309)||(3666431-3666533)
chr2 (227-297)||(6761731-6761801)
chr2 (262-304)||(33898643-33898685)
chr2 (194-308)||(39647767-39647881)
chr2 (247-296)||(7271831-7271880)
chr2 (207-292)||(8086966-8087051)
chr2 (211-296)||(8333580-8333665)
chr2 (194-311)||(44941072-44941189)
chr2 (196-288)||(814996-815088)
chr2 (199-287)||(18684365-18684453)
chr2 (209-313)||(33962932-33963036)
chr2 (206-309)||(44838626-44838730)
chr2 (196-283)||(19890208-19890295)
chr2 (194-281)||(25622532-25622618)
chr2 (196-271)||(37313700-37313775)
chr2 (242-304)||(16944811-16944873)
chr2 (242-304)||(17015476-17015538)
chr2 (207-281)||(19495215-19495288)
chr2 (189-283)||(32859778-32859872)
chr2 (260-297)||(11364702-11364739)
chr2 (260-297)||(32787586-32787623)
chr2 (189-304)||(1334881-1334997)
chr2 (260-296)||(21004775-21004811)
chr2 (194-294)||(42924425-42924525)
[»] chr1 (66 HSPs)
chr1 (184-320)||(48947192-48947328)
chr1 (189-314)||(16113912-16114039)
chr1 (194-314)||(33791727-33791847)
chr1 (189-311)||(39973885-39974007)
chr1 (189-305)||(35259043-35259159)
chr1 (194-280)||(31042999-31043085)
chr1 (189-314)||(34861200-34861325)
chr1 (194-310)||(4040891-4041007)
chr1 (194-310)||(40286856-40286972)
chr1 (189-295)||(3047860-3047966)
chr1 (216-313)||(38172665-38172762)
chr1 (194-314)||(49478810-49478931)
chr1 (196-304)||(40053293-40053401)
chr1 (189-293)||(42573778-42573882)
chr1 (197-314)||(48874-48991)
chr1 (196-313)||(35543392-35543509)
chr1 (206-306)||(290601-290701)
chr1 (193-305)||(24034054-24034166)
chr1 (207-309)||(51904562-51904664)
chr1 (207-307)||(1656447-1656548)
chr1 (194-298)||(10355031-10355135)
chr1 (217-314)||(31652643-31652740)
chr1 (194-307)||(46804819-46804932)
chr1 (196-307)||(759221-759333)
chr1 (216-311)||(30548293-30548387)
chr1 (217-304)||(40203076-40203163)
chr1 (196-281)||(31807800-31807886)
chr1 (194-312)||(40341599-40341718)
chr1 (222-296)||(9931801-9931875)
chr1 (194-310)||(290841-290957)
chr1 (194-282)||(26700247-26700335)
chr1 (247-314)||(12148287-12148354)
chr1 (218-305)||(44461597-44461683)
chr1 (207-296)||(32787261-32787351)
chr1 (194-295)||(31398418-31398519)
chr1 (228-297)||(45753482-45753551)
chr1 (207-310)||(24075110-24075214)
chr1 (221-313)||(40377067-40377159)
chr1 (217-296)||(5115612-5115691)
chr1 (194-281)||(33744156-33744243)
chr1 (189-267)||(4521043-4521121)
chr1 (194-283)||(27934747-27934837)
chr1 (241-310)||(30350911-30350978)
chr1 (189-315)||(36321612-36321738)
chr1 (230-315)||(39807557-39807643)
chr1 (190-295)||(5423753-5423858)
chr1 (227-296)||(25302103-25302172)
chr1 (247-296)||(47364049-47364098)
chr1 (217-314)||(50974562-50974659)
chr1 (189-269)||(37037640-37037720)
chr1 (207-295)||(44442261-44442349)
chr1 (192-295)||(4220636-4220739)
chr1 (209-304)||(14758572-14758667)
chr1 (217-312)||(31745397-31745492)
chr1 (242-297)||(34596125-34596180)
chr1 (212-295)||(43216299-43216382)
chr1 (242-296)||(9590913-9590967)
chr1 (254-312)||(44719239-44719297)
chr1 (194-283)||(5250920-5251009)
chr1 (228-297)||(7750463-7750532)
chr1 (212-257)||(8791485-8791530)
chr1 (243-304)||(18038940-18039001)
chr1 (207-248)||(19533280-19533321)
chr1 (210-309)||(38320538-38320636)
chr1 (260-296)||(42564262-42564298)
chr1 (221-297)||(50222612-50222688)
[»] chr7 (50 HSPs)
chr7 (191-314)||(8237945-8238068)
chr7 (197-305)||(19619993-19620101)
chr7 (196-314)||(34299731-34299849)
chr7 (189-314)||(5907817-5907941)
chr7 (206-315)||(5482395-5482503)
chr7 (194-314)||(43492189-43492310)
chr7 (194-305)||(44452038-44452150)
chr7 (196-287)||(24299146-24299237)
chr7 (193-314)||(24610826-24610947)
chr7 (194-314)||(3267598-3267718)
chr7 (196-283)||(41150034-41150121)
chr7 (191-304)||(25036962-25037076)
chr7 (194-298)||(39316297-39316401)
chr7 (196-315)||(26871771-26871890)
chr7 (189-295)||(34681685-34681791)
chr7 (194-310)||(23682444-23682559)
chr7 (196-312)||(39241570-39241687)
chr7 (216-302)||(7432656-7432743)
chr7 (207-304)||(38988717-38988816)
chr7 (189-294)||(18926320-18926425)
chr7 (194-271)||(31498660-31498737)
chr7 (194-283)||(46716177-46716266)
chr7 (194-314)||(10031909-10032029)
chr7 (217-308)||(38452192-38452283)
chr7 (196-305)||(26872781-26872891)
chr7 (192-250)||(35395904-35395962)
chr7 (189-299)||(47507603-47507713)
chr7 (190-281)||(3256648-3256740)
chr7 (194-314)||(9097683-9097802)
chr7 (235-287)||(32699395-32699447)
chr7 (194-293)||(41431099-41431199)
chr7 (194-269)||(1360534-1360609)
chr7 (189-314)||(27123267-27123393)
chr7 (194-267)||(33887887-33887960)
chr7 (194-298)||(35496576-35496681)
chr7 (194-287)||(35599817-35599910)
chr7 (261-314)||(47305514-47305567)
chr7 (207-256)||(48837977-48838025)
chr7 (212-304)||(31902747-31902839)
chr7 (194-252)||(6392179-6392237)
chr7 (217-315)||(8170052-8170150)
chr7 (217-271)||(10453485-10453539)
chr7 (218-304)||(34398074-34398159)
chr7 (222-307)||(8327824-8327909)
chr7 (217-298)||(17883317-17883398)
chr7 (219-296)||(40722382-40722459)
chr7 (189-261)||(25176329-25176401)
chr7 (191-298)||(26239544-26239652)
chr7 (217-296)||(35567135-35567215)
chr7 (229-277)||(37352436-37352484)
[»] chr8 (58 HSPs)
chr8 (189-314)||(12002260-12002385)
chr8 (189-305)||(1876479-1876595)
chr8 (189-314)||(14016855-14016980)
chr8 (194-309)||(11533230-11533345)
chr8 (198-296)||(44220716-44220814)
chr8 (189-305)||(31844214-31844331)
chr8 (196-304)||(32271170-32271278)
chr8 (237-314)||(36907841-36907918)
chr8 (194-314)||(39594477-39594597)
chr8 (207-305)||(40628964-40629062)
chr8 (194-303)||(38019418-38019526)
chr8 (196-295)||(44907218-44907318)
chr8 (194-305)||(7627844-7627955)
chr8 (194-304)||(38047607-38047718)
chr8 (194-304)||(2376726-2376836)
chr8 (195-283)||(20522943-20523031)
chr8 (187-282)||(37449531-37449626)
chr8 (189-304)||(1773799-1773915)
chr8 (201-314)||(41959969-41960083)
chr8 (194-298)||(1445137-1445242)
chr8 (184-293)||(31264985-31265094)
chr8 (194-282)||(18842275-18842363)
chr8 (207-314)||(30486620-30486728)
chr8 (194-304)||(39691112-39691222)
chr8 (212-313)||(4278957-4279057)
chr8 (194-305)||(5020051-5020160)
chr8 (184-283)||(24869402-24869497)
chr8 (194-305)||(35501064-35501176)
chr8 (212-296)||(35592455-35592539)
chr8 (214-311)||(14453699-14453794)
chr8 (243-305)||(34722774-34722837)
chr8 (194-256)||(30158108-30158170)
chr8 (194-288)||(37564346-37564440)
chr8 (196-288)||(9629833-9629925)
chr8 (194-307)||(12782775-12782888)
chr8 (223-304)||(26014752-26014833)
chr8 (189-304)||(42636363-42636479)
chr8 (206-239)||(9005010-9005043)
chr8 (203-304)||(27505979-27506079)
chr8 (189-281)||(37813423-37813516)
chr8 (207-304)||(43419730-43419827)
chr8 (207-288)||(43841043-43841124)
chr8 (194-266)||(24103087-24103159)
chr8 (194-298)||(34336477-34336581)
chr8 (208-304)||(41105996-41106092)
chr8 (196-280)||(42801078-42801162)
chr8 (246-293)||(7931765-7931812)
chr8 (217-296)||(45368729-45368808)
chr8 (194-288)||(33636716-33636810)
chr8 (262-311)||(32133686-32133735)
chr8 (189-282)||(41385258-41385351)
chr8 (194-255)||(42022640-42022701)
chr8 (252-313)||(44960519-44960580)
chr8 (212-296)||(6270334-6270418)
chr8 (194-313)||(33013043-33013163)
chr8 (264-304)||(33285923-33285963)
chr8 (194-281)||(33949571-33949658)
chr8 (226-298)||(44254131-44254203)
[»] chr4 (67 HSPs)
chr4 (194-313)||(53261556-53261675)
chr4 (194-314)||(40252654-40252773)
chr4 (194-275)||(49951717-49951798)
chr4 (194-313)||(53622301-53622421)
chr4 (192-295)||(36876064-36876167)
chr4 (189-314)||(37461460-37461585)
chr4 (190-295)||(45743309-45743414)
chr4 (194-295)||(52650697-52650798)
chr4 (196-305)||(3179003-3179113)
chr4 (194-295)||(31262914-31263014)
chr4 (194-295)||(47937861-47937962)
chr4 (189-305)||(49795138-49795254)
chr4 (207-310)||(38354473-38354577)
chr4 (189-305)||(17970803-17970917)
chr4 (197-270)||(23136539-23136612)
chr4 (208-304)||(41370166-41370262)
chr4 (194-306)||(50617494-50617606)
chr4 (196-294)||(4391968-4392067)
chr4 (207-313)||(35153262-35153369)
chr4 (194-314)||(32175431-32175550)
chr4 (203-320)||(18939850-18939967)
chr4 (195-293)||(25042743-25042837)
chr4 (189-296)||(21687591-21687699)
chr4 (189-313)||(22889253-22889377)
chr4 (189-313)||(22940917-22941041)
chr4 (240-315)||(20022234-20022309)
chr4 (194-288)||(2063473-2063567)
chr4 (228-314)||(49446581-49446667)
chr4 (189-304)||(8297864-8297980)
chr4 (189-260)||(21241120-21241191)
chr4 (201-311)||(39767212-39767323)
chr4 (221-284)||(44570122-44570185)
chr4 (196-286)||(49622961-49623052)
chr4 (206-304)||(7996722-7996816)
chr4 (196-287)||(19597165-19597256)
chr4 (228-299)||(36721589-36721660)
chr4 (228-314)||(49421882-49421969)
chr4 (194-283)||(12618713-12618802)
chr4 (196-313)||(39724055-39724175)
chr4 (189-309)||(20390018-20390138)
chr4 (189-293)||(23016231-23016335)
chr4 (206-309)||(23614626-23614729)
chr4 (194-298)||(25115267-25115371)
chr4 (189-281)||(44690284-44690376)
chr4 (220-283)||(14949006-14949069)
chr4 (194-265)||(24369405-24369476)
chr4 (194-265)||(37179689-37179760)
chr4 (254-313)||(41468142-41468201)
chr4 (196-295)||(48097952-48098051)
chr4 (242-296)||(1696194-1696248)
chr4 (194-288)||(24546722-24546816)
chr4 (243-313)||(38949048-38949118)
chr4 (194-256)||(40173524-40173586)
chr4 (242-304)||(41956428-41956490)
chr4 (217-297)||(50115068-50115145)
chr4 (207-271)||(41394013-41394078)
chr4 (217-294)||(51105943-51106020)
chr4 (194-298)||(51834912-51835017)
chr4 (194-258)||(2818357-2818421)
chr4 (242-314)||(7628005-7628077)
chr4 (189-233)||(21240662-21240706)
chr4 (246-298)||(24753978-24754030)
chr4 (194-282)||(27748438-27748526)
chr4 (189-304)||(32055338-32055454)
chr4 (244-288)||(42901983-42902027)
chr4 (194-281)||(42956992-42957080)
chr4 (242-314)||(44647869-44647941)
[»] chr6 (26 HSPs)
chr6 (196-314)||(29716752-29716871)
chr6 (207-307)||(10364754-10364854)
chr6 (194-314)||(23344569-23344690)
chr6 (194-288)||(13445745-13445839)
chr6 (194-311)||(5704549-5704665)
chr6 (207-315)||(21130707-21130816)
chr6 (194-304)||(27752644-27752759)
chr6 (218-313)||(34552311-34552407)
chr6 (184-295)||(6586424-6586535)
chr6 (207-314)||(10429739-10429845)
chr6 (214-314)||(34552165-34552265)
chr6 (195-311)||(34552494-34552610)
chr6 (184-293)||(3753103-3753213)
chr6 (184-293)||(3769326-3769436)
chr6 (245-313)||(1479081-1479149)
chr6 (191-238)||(26187510-26187557)
chr6 (194-304)||(27778752-27778862)
chr6 (217-283)||(6546738-6546804)
chr6 (227-297)||(7465508-7465578)
chr6 (262-304)||(26187452-26187494)
chr6 (194-304)||(30509314-30509424)
chr6 (217-295)||(31702747-31702825)
chr6 (196-305)||(354576-354685)
chr6 (242-310)||(22695473-22695542)
chr6 (194-298)||(2692434-2692538)
chr6 (189-289)||(12132520-12132620)
[»] chr3 (49 HSPs)
chr3 (194-313)||(48551038-48551157)
chr3 (206-304)||(14146110-14146208)
chr3 (194-307)||(3026979-3027093)
chr3 (184-305)||(12140133-12140255)
chr3 (194-304)||(45757927-45758037)
chr3 (189-314)||(24313544-24313670)
chr3 (196-304)||(20821303-20821412)
chr3 (194-314)||(25317803-25317923)
chr3 (194-315)||(46725655-46725776)
chr3 (232-305)||(33072108-33072181)
chr3 (194-281)||(29612018-29612106)
chr3 (207-283)||(37388418-37388494)
chr3 (189-288)||(54911194-54911293)
chr3 (228-314)||(1511367-1511453)
chr3 (212-305)||(40614263-40614356)
chr3 (194-314)||(22772858-22772979)
chr3 (194-271)||(28691955-28692032)
chr3 (180-304)||(49168725-49168849)
chr3 (222-314)||(18399147-18399239)
chr3 (217-304)||(1829243-1829330)
chr3 (194-285)||(53040467-53040558)
chr3 (198-282)||(9342672-9342757)
chr3 (194-267)||(48322241-48322314)
chr3 (194-251)||(50644132-50644189)
chr3 (273-313)||(39651994-39652034)
chr3 (196-287)||(45584343-45584432)
chr3 (242-297)||(25548203-25548258)
chr3 (189-267)||(37708430-37708508)
chr3 (189-290)||(38009026-38009128)
chr3 (235-305)||(52340118-52340188)
chr3 (194-283)||(2831545-2831634)
chr3 (197-298)||(37359467-37359570)
chr3 (214-267)||(40546345-40546398)
chr3 (217-297)||(19898107-19898187)
chr3 (242-314)||(54911986-54912058)
chr3 (218-265)||(25061987-25062034)
chr3 (191-298)||(48811372-48811479)
chr3 (189-284)||(54290795-54290890)
chr3 (190-260)||(12908860-12908930)
chr3 (194-304)||(23554672-23554781)
chr3 (260-305)||(27968262-27968307)
chr3 (213-314)||(34758946-34759047)
chr3 (222-299)||(41750755-41750832)
chr3 (219-288)||(43803992-43804061)
chr3 (184-288)||(4305156-4305260)
chr3 (243-295)||(40690235-40690287)
chr3 (224-288)||(46547794-46547858)
chr3 (207-267)||(46711949-46712009)
chr3 (217-293)||(53766702-53766777)
[»] chr5 (48 HSPs)
chr5 (192-315)||(14309071-14309197)
chr5 (196-310)||(38594923-38595037)
chr5 (194-313)||(26453630-26453748)
chr5 (223-309)||(16636656-16636742)
chr5 (196-312)||(17774272-17774388)
chr5 (195-312)||(26432261-26432378)
chr5 (207-311)||(22601786-22601890)
chr5 (209-312)||(27325814-27325917)
chr5 (194-282)||(12221435-12221523)
chr5 (194-261)||(41568708-41568775)
chr5 (194-288)||(4695070-4695164)
chr5 (207-305)||(21259415-21259513)
chr5 (190-314)||(5356286-5356410)
chr5 (194-310)||(29829588-29829704)
chr5 (221-311)||(3263772-3263862)
chr5 (194-304)||(10228317-10228426)
chr5 (217-307)||(27794854-27794944)
chr5 (189-314)||(5758555-5758680)
chr5 (189-312)||(10410443-10410567)
chr5 (207-287)||(26686667-26686747)
chr5 (207-287)||(26956398-26956478)
chr5 (196-283)||(36609150-36609237)
chr5 (221-309)||(8247092-8247180)
chr5 (207-313)||(43000760-43000868)
chr5 (214-312)||(28639570-28639669)
chr5 (221-311)||(10051755-10051845)
chr5 (228-314)||(31672444-31672530)
chr5 (194-304)||(31914168-31914277)
chr5 (189-283)||(39177675-39177768)
chr5 (196-269)||(26663635-26663708)
chr5 (196-269)||(26935230-26935303)
chr5 (254-314)||(22473493-22473553)
chr5 (194-288)||(967100-967194)
chr5 (189-298)||(30104797-30104907)
chr5 (189-314)||(30501127-30501253)
chr5 (189-314)||(30541470-30541596)
chr5 (242-288)||(31889662-31889708)
chr5 (189-267)||(34032125-34032203)
chr5 (217-293)||(14475009-14475085)
chr5 (217-304)||(14042484-14042571)
chr5 (194-288)||(25437888-25437983)
chr5 (189-303)||(779079-779192)
chr5 (229-310)||(28207696-28207778)
chr5 (194-283)||(2918616-2918705)
chr5 (243-304)||(20125652-20125713)
chr5 (194-295)||(24041030-24041131)
chr5 (194-239)||(36160317-36160362)
chr5 (196-232)||(9740932-9740968)
[»] scaffold0010 (1 HSPs)
scaffold0010 (189-288)||(26694-26793)
[»] scaffold0236 (1 HSPs)
scaffold0236 (207-315)||(19578-19686)
[»] scaffold0037 (1 HSPs)
scaffold0037 (207-310)||(35274-35376)
[»] scaffold0053 (1 HSPs)
scaffold0053 (189-250)||(5755-5816)
[»] scaffold0011 (1 HSPs)
scaffold0011 (191-283)||(219185-219277)


Alignment Details
Target: chr2 (Bit Score: 150; Significance: 3e-79; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 35163268 - 35163119
Alignment:
Q  23 ggggggaaggccacacaaacaggcaattctactaccaccaacgagtggaatggagaggaaagctaagagttgaaacagagaaaggcggggagtataaatc 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35163268 ggggggaaggccacacaaacaggcaattctactaccaccaacgagtggaatggagaggaaagctaagagttgaaacagagaaaggcggggagtataaatc 35163169  T
Q  123 gacgatataagattccggcaactctaatattgccgtcaaaatgttcagtg 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35163168 gacgatataagattccggcaactctaatattgccgtcaaaatgttcagtg 35163119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 39846489 - 39846340
Alignment:
Q  23 ggggggaaggccacacaaacaggcaattctactaccaccaacgagtggaatggagaggaaagctaagagttgaaacagagaaaggcggggagtataaatc 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39846489 ggggggaaggccacacaaacaggcaattctactaccaccaacgagtggaatggagagaaaagctaagagttgaaacagagaaaggcggggagtataaatc 39846390  T
Q  123 gacgatataagattccggcaactctaatattgccgtcaaaatgttcagtg 172  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39846389 gacgatataagattccggcaactctaatattgccgccaaaatgttcagtg 39846340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 44796852 - 44797001
Alignment:
Q  23 ggggggaaggccacacaaacaggcaattctactaccaccaacgagtggaatggagaggaaagctaagagttgaaacagagaaaggcggggagtataaatc 122  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44796852 ggggggaatgccacacaaacaggcaattctactaccaccaacgagtggaatggagaggaaagctaagagttgaaacagagaaaggcggggagtataaatc 44796951  T
Q  123 gacgatataagattccggcaactctaatattgccgtcaaaatgttcagtg 172  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44796952 gacgatataagattccggcaactctaatattgccgccaaaatgttcagtg 44797001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 39841437 - 39841288
Alignment:
Q  23 ggggggaaggccacacaaacaggcaattctactaccaccaacgagtggaatggagaggaaagctaagagttgaaacagagaaaggcggggagtataaatc 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39841437 ggggggaaggccacacaaacaggcaattctactaccaccaacgagtggaatggagagaaaagctaagagttgaaacagagaaaggcggggagtataaatc 39841338  T
Q  123 gacgatataagattccggcaactctaatattgccgtcaaaatgttcagtg 172  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39841337 cacgatataagattccggcaactctaatattgccgccaaaatgttcagtg 39841288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 189 - 307
Target Start/End: Complemental strand, 12848585 - 12848467
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| |||||||||||| |||||||||||| |||| ||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||      
T  12848585 ggcactctttaagcatattaaattaagtaactattctttaataatgtcaaagttttcaatttccattgcactaattacacaaactttcataaaaagttgt 12848486  T
Q  289 catttaaagtccttaacta 307  Q
    ||||||| |||||||||||    
T  12848485 catttaaggtccttaacta 12848467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 293
Target Start/End: Complemental strand, 24389736 - 24389632
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||    
T  24389736 ggcactctttaagcatgctaaattaagtaattattcttttaagatgtcaaagttttcaatttccaatgcgctgattacacaaactttcataagaagttac 24389637  T
Q  289 cattt 293  Q
    |||||    
T  24389636 cattt 24389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 33068639 - 33068540
Alignment:
Q  206 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||  ||||  |||||||||    
T  33068639 ctaaattaagtaattattttttaaaaatgtgaaagttttcaatttctaatgcactgattatacaaactttcataaaaagttactttttatggtccttaac 33068540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 194 - 295
Target Start/End: Original strand, 33454966 - 33455067
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| |||||||||| || |||| |||||||||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||| ||||    
T  33454966 tctttaagcatgctaaattaagaaactattctttaaaaatgtcaaagttttcaatttacaatacattgattacacaacttttcataaaaagttactattt 33455065  T
Q  294 aa 295  Q
    ||    
T  33455066 aa 33455067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 431726 - 431621
Alignment:
Q  210 attaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactag 308  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||||| ||||| |     
T  431726 attaagtaattattctttaaaaatgttaaaattttcaatttccaatgcacttttttacacaaactttcataaaaagttaccatttaaagtctttaaccaa 431627  T
Q  309 tgcccc 314  Q
    ||||||    
T  431626 tgcccc 431621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 194 - 293
Target Start/End: Complemental strand, 6084010 - 6083911
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||| |||||  ||||||||||||| ||| ||||||||||| |||||    
T  6084010 tctttaagcatactaaatttagtaattattattttaaaatatcaaagttttcaattttcaatgtgctgattacacaaacttttataaaaagttatcattt 6083911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 194 - 296
Target Start/End: Complemental strand, 6334780 - 6334678
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |||  |||||||||| |||||    
T  6334780 tctttaaacatgctaaattaaaaaattattttttaaaaatgtcaaagttttcaatttccaatgcattgattatataaacttttgtaaaaagttatcattt 6334681  T
Q  294 aaa 296  Q
    |||    
T  6334680 aaa 6334678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 12205530 - 12205620
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaa 296  Q
    |||||||||||||||||||||| |||| ||||||||||| |||| |||||||| | |||||||||||||||| ||||||||||||||||||    
T  12205530 taaattaagtaattattttttataaatatcaaagttttccatttgcaatgcacattattacacaaattttcaaaaaaagttaccatttaaa 12205620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 565802 - 565706
Alignment:
Q  194 tctttaagcatactaaattaagtaat--tattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||||||| |||||||||||||   |||| ||||||||||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  565802 tctttaagcatgctaaattaagtaaaagtattctttaaaaatgtgaaagttttcaatttcctatgcactaattacacaaactttcataaaaagttac 565706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 281
Target Start/End: Original strand, 8964392 - 8964477
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 281  Q
    ||||||||| |||||||||||||||||| |||||||| || |||  ||||||||||||||||| ||||||||||||||||||||||    
T  8964392 tttaagcattctaaattaagtaattattctttaaaaaagtaaaatatttcaatttccaatgcattgattacacaaattttcataaa 8964477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 207 - 304
Target Start/End: Original strand, 30523014 - 30523111
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    |||||||| ||||| || ||||| |||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||| || |||||    
T  30523014 taaattaaataatttttctttaacaatgtcaaagttttcaatttccaatgtactaattacacaaactttcataaaaagttaccatctaaggtacttaa 30523111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 210 - 305
Target Start/End: Complemental strand, 42342581 - 42342487
Alignment:
Q  210 attaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    ||||| |||||||| ||||||||||||||| ||||||||||  ||| ||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  42342581 attaaataattattctttaaaaatgtcaaaattttcaatttt-aatacactgattaaacaaattttcataaaaagttaccatttaatatccttaac 42342487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 33634906 - 33634796
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||| ||  |||||||| ||||||||  || ||||| | |||||||||||||||||||| ||||||| ||||| |||| |||||||||||| ||||    
T  33634906 tctttaaggatgttaaattaaataattattcgtttaaaatatgaaagttttcaatttccaatgtactgattgcacaactttttataaaaagttactattt 33634807  T
Q  294 aaagtccttaa 304  Q
    |||||||||||    
T  33634806 aaagtccttaa 33634796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 6411480 - 6411367
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    ||||| ||| |||||| ||||||||||| ||| ||||| | |||||||||||||||||||| |||||||||||| | ||| |||||||||||  ||||||    
T  6411480 tttaaacatgctaaataaagtaattattcttttaaaatttaaaagttttcaatttccaatgtactgattacacatacttttataaaaagttattatttaa 6411381  T
Q  296 agtccttaactagt 309  Q
     || ||||||||||    
T  6411380 ggttcttaactagt 6411367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 307
Target Start/End: Original strand, 32066740 - 32066833
Alignment:
Q  214 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaacta 307  Q
    ||||||||||||||  ||||||||||||||| |||||| |||| ||| |||||||||| |||||||||||||||  |||||| |||||||||||    
T  32066740 agtaattattttttttaaatgtcaaagtttttaatttctaatgtactaattacacaaactttcataaaaagttataatttaaggtccttaacta 32066833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 304
Target Start/End: Complemental strand, 9049256 - 9049148
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    |||||||||  ||||||||||||||||| ||| ||||||| ||| |||||||||| ||||||| | |||||||||||||| |||||||||||  ||||||    
T  9049256 tttaagcatgttaaattaagtaattattcttttaaaatgttaaatttttcaattttcaatgcattaattacacaaatttttataaaaagttattatttaa 9049157  T
Q  296 agtccttaa 304  Q
     || |||||    
T  9049156 ggttcttaa 9049148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 3074073 - 3074187
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagtta 287  Q
    |||| |||||||||||  |||||||||||||||||  || ||||| |||||| ||||||||||||||||||||||||||   || ||| || ||||||||    
T  3074073 ggcactctttaagcatgataaattaagtaattattcatttaaaatatcaaagtttttcaatttccaatgcactgattac---aactttaatgaaaagtta 3074169  T
Q  288 ccatttaaagtccttaac 305  Q
    |||||||||||| |||||    
T  3074170 ccatttaaagtctttaac 3074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 2826074 - 2825977
Alignment:
Q  184 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 281  Q
    ||||||| | ||||||||||||||||| |||| |||||||||||||||| || |||  |||| |||||||||||| |||||||||| ||||| |||||    
T  2826074 cctgtggtactctttaagcatactaaaataagaaattattttttaaaaaagtaaaatatttcgatttccaatgcattgattacacacatttttataaa 2825977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 4655069 - 4654992
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 271  Q
    ||||||||||| ||||||||  |||||||||||| ||||| |||||||||||||||| |||||||| |||||||||||    
T  4655069 tctttaagcatgctaaattagataattatttttttaaaatatcaaagttttcaattttcaatgcaccgattacacaaa 4654992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 310
Target Start/End: Original strand, 9448450 - 9448570
Alignment:
Q  191 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgat-tacacaaattttcataaaaagttacc 289  Q
    ||||||| ||| || |||||||||||| ||||||||||||| ||||||| |||||||||| |||||||||||| |  || || ||||||||||  |||      
T  9448450 cattcttaaagtattctaaattaagtagttattttttaaaactgtcaaacttttcaattttcaatgcactgatgtgtactaactttcataaaagtttatt 9448549  T
Q  290 atttaaagtccttaactagtg 310  Q
    |||||| ||||||||||||||    
T  9448550 atttaaggtccttaactagtg 9448570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 21277551 - 21277666
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||| ||  ||||||||||||||||||||| ||||||||||| ||||||| || ||||||||||||||||  || ||| ||||||  |||||||||    
T  21277551 tctttaagtattttaaattaagtaattatttttttaaaatgtcaaacttttcaa-ttgcaatgcactgattacagtaacttttataaaagtttaccattt 21277649  T
Q  294 aaagtccttaactagtg 310  Q
    ||  |||||||| ||||    
T  21277650 aagatccttaaccagtg 21277666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 314
Target Start/End: Original strand, 40874826 - 40874934
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    ||||||||||||||||||||||||||||| |||  |||||||||| ||| ||||| ||  ||| || ||||||||||  |||| ||||||||||||||||    
T  40874826 taaattaagtaattattttttaaaaatgttaaactttttcaattttcaacgcactaatggcactaactttcataaaagtttactatttaaagtccttaac 40874925  T
Q  306 tagtgcccc 314  Q
     ||||||||    
T  40874926 cagtgcccc 40874934  T

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Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 12762979 - 12762896
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca 277  Q
    |||||||||||   |||||||||||||||| || |||||||| ||| ||||||||||||||||||||| ||||||||| |||||    
T  12762979 tctttaagcatttaaaattaagtaattattcttaaaaaatgttaaaattttcaatttccaatgcactgtttacacaaactttca 12762896  T

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Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 30822815 - 30822764
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca 258  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30822815 taaattaagtaattattttttgaaaatgtcaaagttttcaatttccaatgca 30822764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 13538389 - 13538495
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||||||||||||||||   ||||||| ||||||||  |||||   |||||||||||||||| ||| |||| || |||||||||||||||||    
T  13538389 ggcactctttaagcatactaaattagaaaattattctttaaaaaattcaaataattcaatttccaatgcattgaatacataacttttcataaaaagttac 13538488  T
Q  289 catttaa 295  Q
     ||||||    
T  13538489 tatttaa 13538495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 194 - 312
Target Start/End: Complemental strand, 29685812 - 29685694
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| ||| |||||| ||||||||||| ||| ||||| | |||||| ||||||| ||| |||| |||||||||||||||  ||||||||||  ||||    
T  29685812 tctttaaacatgctaaataaagtaattattctttcaaaatttaaaagttctcaattttcaacgcaccgattacacaaatttttgtaaaaagttattattt 29685713  T
Q  294 aaagtccttaactagtgcc 312  Q
     |  |||||||||||||||    
T  29685712 tagatccttaactagtgcc 29685694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 30869673 - 30869589
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaatttt 275  Q
    |||| ||||||||||| ||||||||| |  ||||| ||||||||||| ||||||||||||||| ||| ||||||| |||||||||||    
T  30869673 ggcactctttaagcatgctaaattaaat--ttattctttaaaaatgttaaagttttcaatttctaatacactgataacacaaatttt 30869589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 298
Target Start/End: Original strand, 18043839 - 18043942
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| |||||||||| ||||| | ||||||| ||||| | |||||||| | ||| ||||||| | |||||||||| ||| |||||||||||| ||||    
T  18043839 tctttaaacatactaaataaagtact-atttttttaaaatttaaaagtttttagttttcaatgcattaattacacaaagttttataaaaagttactattt 18043937  T
Q  294 aaagt 298  Q
    |||||    
T  18043938 aaagt 18043942  T

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Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 304
Target Start/End: Original strand, 11385462 - 11385561
Alignment:
Q  206 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    |||||| ||||||||||| ||||||| | ||||| ||||| ||||||||| ||| | || ||||||| ||| ||||||||||| |||||||| |||||||    
T  11385462 ctaaatcaagtaattattctttaaaattatcaaatttttctatttccaatacactttataacacaaacttttataaaaagttatcatttaaaatccttaa 11385561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 28695684 - 28695605
Alignment:
Q  231 aatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaactagt 309  Q
    ||||||||||| |||||||||||||||| |  |||||||||| ||| |||||||||||| |||||||||  |||||||||    
T  28695684 aatgtcaaagtgttcaatttccaatgcaatttattacacaaacttttataaaaagttactatttaaagtgtttaactagt 28695605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 312
Target Start/End: Complemental strand, 2796626 - 2796517
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||||||||||||| |||||||||||||||||||         |||||||||| ||||  |||||||||||||| ||| ||||||| |||| ||||    
T  2796626 tctttaagcatactaaataaagtaattattttttaaaa---------ttttcaattttcaatatactgattacacaaacttttataaaaaattactattt 2796536  T
Q  294 aaagtccttaactagtgcc 312  Q
     |  ||||||| |||||||    
T  2796535 tatatccttaattagtgcc 2796517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 27692822 - 27692744
Alignment:
Q  211 ttaagtaattattttttaaaaatgtcaaagtttt-caatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||||||||||||||||  |||||| || ||||| |||||||||||||| | |||||| ||||||| ||||||||||||    
T  27692822 ttaagtaattattttttttaaatgtaaatgtttttcaatttccaatgcatttattacataaatttttataaaaagttac 27692744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 28858098 - 28858152
Alignment:
Q  190 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt 244  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||    
T  28858098 gcattctttaagcattctaaattaagtaaatattctttaaaaatgtcaaattttt 28858152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 3882609 - 3882698
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat 278  Q
    |||| ||||||||||| ||||| |||| ||||||| |||||||| ||||||  ||||  ||| ||||||| |||||||||| ||||||||    
T  3882609 ggcactctttaagcattctaaaataagcaattattctttaaaaaggtcaaatatttcggttttcaatgcattgattacacacattttcat 3882698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 311
Target Start/End: Complemental strand, 5962023 - 5961954
Alignment:
Q  242 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 311  Q
    ||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||  ||||| ||||||    
T  5962023 tttcaatttccaatgcattgattacataaattttcaaaaacagttactatttaaaggtcttaaatagtgc 5961954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 11944981 - 11944892
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    |||||||| || |||| || ||||||||||||| |||||||||||   || |||||| ||||||| ||| ||||||| ||||||||||||    
T  11944981 tctttaaggatcctaattttagtaattatttttaaaaaatgtcaactattacaattttcaatgcattgaatacacaacttttcataaaaa 11944892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 37284981 - 37284896
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccat 291  Q
    ||||||||||||||||||||||||||| | ||| |||||||||| ||||||| | ||||| |||| ||  || |||||||||||||    
T  37284981 taaattaagtaattattttttaaaaatcttaaatttttcaattttcaatgcaataattacgcaaacttctataaaaaagttaccat 37284896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 10183219 - 10183299
Alignment:
Q  225 tttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    ||||||||||||||| ||||||||||  |||||| | |||| ||||||||||||||| | |||| ||||||  ||||||||    
T  10183219 tttaaaaatgtcaaaattttcaatttttaatgcattaattatacaaattttcataaatatttactatttaagatccttaac 10183299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 9153581 - 9153494
Alignment:
Q  195 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 282  Q
    ||||||| || | |||||||| ||||||| |||||||| | ||||   |||||||||||||||| ||| |||||||||||| ||||||    
T  9153581 ctttaaggattccaaattaagaaattattctttaaaaaaggcaaacacttcaatttccaatgcattgaatacacaaatttttataaaa 9153494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 15806105 - 15806054
Alignment:
Q  237 aaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  15806105 aaagttttcaattttcaatgcattgattacacaaacttttataaaaagttac 15806054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 283
Target Start/End: Original strand, 41543970 - 41544065
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgt-caaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    ||||||||||||||||| ||||||| | ||||||| ||||||||  | ||||   |||||||||||||||| ||| |||| || ||||||||||||    
T  41543970 ggcattctttaagcatattaaattaggaaattattctttaaaaaaattcaaatagttcaatttccaatgcaatgaatacataatttttcataaaaa 41544065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 309
Target Start/End: Complemental strand, 3666533 - 3666431
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 306  Q
    ||||||||||||||||| ||||||||| | ||| |||| ||||  |||| || |||||||| ||| ||||||||||| |||  ||||||  || ||||||    
T  3666533 taaattaagtaattattctttaaaaatattaaaatttttaattctcaatacattgattacataaactttcataaaaaattattatttaagatctttaact 3666434  T
Q  307 agt 309  Q
    |||    
T  3666433 agt 3666431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 297
Target Start/End: Complemental strand, 6761801 - 6761731
Alignment:
Q  227 taaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 297  Q
    |||||| ||||||  ||||||||||||||||| |||||||| ||||||||| |||||| |||  |||||||    
T  6761801 taaaaaagtcaaatatttcaatttccaatgcattgattacataaattttcaaaaaaagatacattttaaag 6761731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 33898685 - 33898643
Alignment:
Q  262 attacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  33898685 attacacaaatttttataaaaagttaccatttaaggtccttaa 33898643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 308
Target Start/End: Complemental strand, 39647881 - 39647767
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| ||| |||||||||||||||||||||||||||| | ||   |||  ||||||||  |  ||||| |||||| ||| ||||||| ||  || ||    
T  39647881 tctttaaacattctaaattaagtaattattttttaaaaatattaagacttttgatttccaaaacgttgattgcacaaaattttataaaaaattgtcaatt 39647782  T
Q  294 aaagtccttaactag 308  Q
    |||||||||||||||    
T  39647781 aaagtccttaactag 39647767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 7271831 - 7271880
Alignment:
Q  247 atttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    |||||||||||| |||||||| | ||||||||||||||||| ||||||||    
T  7271831 atttccaatgcattgattacatatattttcataaaaagttatcatttaaa 7271880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 292
Target Start/End: Original strand, 8086966 - 8087051
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 292  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||  |||| || ||| ||| ||| ||| ||||||| ||| ||||    
T  8086966 taaattaaataattattttttaaaaatgttaaacttttcaatttttaatgtaccgataacataaacttttataaaaatttaacatt 8087051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 296
Target Start/End: Complemental strand, 8333665 - 8333580
Alignment:
Q  211 ttaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    ||||||||||||| ||||| || ||||||  ||||||||  |||||||  || |||||||||||| ||||||| ||||||| ||||    
T  8333665 ttaagtaattattctttaataaagtcaaacatttcaattctcaatgcatcgaatacacaaatttttataaaaacttaccatctaaa 8333580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 311
Target Start/End: Complemental strand, 44941189 - 44941072
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||| || |||||  ||| || ||| || |||||| || |||| |||| |||||| ||||| |||||||| | |||||| | | || |||||||||    
T  44941189 tctttaaggattctaaaagaagaaagtatgttataaaaaagttaaagatttcgatttccgatgcattgattacatatattttcctgataaattaccattt 44941090  T
Q  294 aaagtccttaactagtgc 311  Q
    |||| |||||||||||||    
T  44941089 aaaggccttaactagtgc 44941072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 288
Target Start/End: Original strand, 814996 - 815088
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||||| | ||||| || ||||||||||||||||  |||||  |  ||| |||||||||| |||||||||  ||||||||||||| ||||    
T  814996 tttaagcatcccaaatttagaaattattttttaaaaaaatcaaatgtcacaaattccaatgcattgattacaccgattttcataaaaacttac 815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 18684365 - 18684453
Alignment:
Q  199 aagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 287  Q
    |||||| |||||||| | | ||||| |||||||| |||| |   |||||||||||||| | | | ||||||||||||||||||||||||    
T  18684365 aagcatgctaaattaggaagttattctttaaaaaagtcatacaattcaatttccaatgtattaaatacacaaattttcataaaaagtta 18684453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 33963036 - 33962932
Alignment:
Q  209 aattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactag 308  Q
    ||||||| ||||||| |||||||| ||  ||   |||||||| ||||||| ||| | ||||| |||||||||||| |||  |||||||||||||||  ||    
T  33963036 aattaagaaattattctttaaaaaagtttaacacttcaattttcaatgcattgaatgcacaatttttcataaaaatttattatttaaagtccttaaagag 33962937  T
Q  309 tgccc 313  Q
    |||||    
T  33962936 tgccc 33962932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 309
Target Start/End: Original strand, 44838626 - 44838730
Alignment:
Q  206 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaagtccttaa 304  Q
    |||||| ||||||||||| ||| ||||| | |||   |||||||| |||| || |||||||||||| ||| || |||||||||  |||||| ||||||||    
T  44838626 ctaaataaagtaattattcttttaaaatttaaaaaaattcaattttcaatacattgattacacaaacttttataaaaaagttattatttaaggtccttaa 44838725  T
Q  305 ctagt 309  Q
    |||||    
T  44838726 ctagt 44838730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 19890295 - 19890208
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    ||||||||| ||||||| |||||||||| ||| |||| |||||   || |||||||||||||| | | ||||||| ||||||| ||||    
T  19890295 tttaagcatcctaaatttagtaattattcttttaaaaagtcaactattacaatttccaatgcatttaatacacaacttttcattaaaa 19890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 281
Target Start/End: Original strand, 25622532 - 25622618
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 281  Q
    ||||||| ||| |||||||||||||||| ||||||||||| |||||  || |||||| ||||||| | |||||| |  ||||||||||    
T  25622532 tctttaaacattctaaattaagtaatta-tttttaaaaatatcaaatattacaattttcaatgcattaattacatattttttcataaa 25622618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 37313775 - 37313700
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 271  Q
    |||||||||  |||||||||||||| || ||||||||  ||||| |||| |||||  |||||||| ||||||||||    
T  37313775 tttaagcattttaaattaagtaatttttctttaaaaaaatcaaaatttttaatttgtaatgcactaattacacaaa 37313700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 16944811 - 16944873
Alignment:
Q  242 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    ||||||||| ||||| | ||| |||||||||||| ||||||| ||||||||||| ||| ||||    
T  16944811 tttcaattttcaatgtattgaatacacaaatttttataaaaacttaccatttaacgtctttaa 16944873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 17015476 - 17015538
Alignment:
Q  242 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    ||||||||| ||||| | ||| |||||||||||| ||||||| ||||||||||| ||| ||||    
T  17015476 tttcaattttcaatgtattgaatacacaaatttttataaaaacttaccatttaacgtctttaa 17015538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 19495215 - 19495288
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 281  Q
    ||||||||||||||||| ||| |||| ||||||  |||| |||||||||||| |||||||||  ||||| |||||    
T  19495215 taaattaagtaattattattttaaaa-gtcaaatatttcgatttccaatgcattgattacacccatttttataaa 19495288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 283
Target Start/End: Original strand, 32859778 - 32859872
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    |||| ||||||| ||| |||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| ||||||||||||    
T  32859778 ggcactctttaaacatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaaatacacaagttttcataaaaa 32859872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 11364702 - 11364739
Alignment:
Q  260 tgattacacaaattttcataaaaagttaccatttaaag 297  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  11364702 tgattatacaaatttttataaaaagttaccatttaaag 11364739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 297
Target Start/End: Complemental strand, 32787623 - 32787586
Alignment:
Q  260 tgattacacaaattttcataaaaagttaccatttaaag 297  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  32787623 tgattacacaaattttcatataaagttatcatttaaag 32787586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 1334997 - 1334881
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 287  Q
    |||| ||||||||||| | ||||| | |||||||| ||||||||  ||||   || |||||||||||||| | | || |||| |||||| |||||| |||    
T  1334997 ggcactctttaagcatcccaaatttaataattattctttaaaaaaatcaactattacaatttccaatgcattcaatatacaatttttcattaaaaactta 1334898  T
Q  288 ccatttaaagtccttaa 304  Q
     |||||||||| |||||    
T  1334897 tcatttaaagtgcttaa 1334881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 21004775 - 21004811
Alignment:
Q  260 tgattacacaaattttcataaaaagttaccatttaaa 296  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  21004775 tgattacacaaattttcaaaaaaaattaccatttaaa 21004811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 294
Target Start/End: Complemental strand, 42924525 - 42924425
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| |||||  |||||||||||||| |||||  |||||  ||||||||| ||| | | ||||||||   ||||||||||| | |||| ||||    
T  42924525 tctttaagcattctaaaagaagtaattatttttaaaaaaaatcaaatatttcaattttcaacgtattgattacatgcattttcataaatatttactattt 42924426  T
Q  294 a 294  Q
    |    
T  42924425 a 42924425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 4e-69; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 48947192 - 48947328
Alignment:
Q  184 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48947192 cctggggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 48947291  T
Q  284 gttaccatttaaagtccttaactagtgccccatttcc 320  Q
    |||||||||||||||||||||||||||||||||||||    
T  48947292 gttaccatttaaagtccttaactagtgccccatttcc 48947328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 16113912 - 16114039
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat--aaaaagtt 286  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  16113912 ggcactctttaagcatactatattaagtaattattttttcaaaatgtcaaagttttcaatttccaatgcactgattacacaaactttcataaaaaaagtt 16114011  T
Q  287 accatttaaagtccttaactagtgcccc 314  Q
    |||||||||   |||||| |||||||||    
T  16114012 accatttaagccccttaagtagtgcccc 16114039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 33791847 - 33791727
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||| || |||||||||||||||||| ||| ||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||| ||||    
T  33791847 tctttaagtatgctaaattaagtaattattcttttaaaatgtcaaatttttcaatttccaatacaccgattacacaaactttcataaaaagttactattt 33791748  T
Q  294 aaagtccttaactagtgcccc 314  Q
    |||||| ||||| ||||||||    
T  33791747 aaagtctttaaccagtgcccc 33791727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 189 - 311
Target Start/End: Original strand, 39973885 - 39974007
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| |||||| ||||| |||||||||||||||     
T  39973885 ggcactctttaagcatgctaaattaagtaattattcttttaaaatgttaaagttttcaattttcaatgcattgattatacaaactttcataaaaagttat 39973984  T
Q  289 catttaaagtccttaactagtgc 311  Q
    ||||||||||| ||||| |||||    
T  39973985 catttaaagtctttaaccagtgc 39974007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 35259159 - 35259043
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| |||||||| || |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||  |||||||||||    
T  35259159 ggcactctttaagtatgctaaattaagaaattattttttaaaaatgtaaaagttttcaatttccaatgcgctgattacacacacatttgtaaaaagttac 35259060  T
Q  289 catttaaagtccttaac 305  Q
    |||||||||||||||||    
T  35259059 catttaaagtccttaac 35259043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 194 - 280
Target Start/End: Original strand, 31042999 - 31043085
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataa 280  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  31042999 tctttaagcattctaaattaagtaattattttttaaaaatgtcaaagttttcaattttcaatgcattgattacacaaactttcataa 31043085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 34861325 - 34861200
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||| ||| || ||||||||||  | ||    
T  34861325 ggcactctttaagcattctaaattaagtaattattttttaaaaatgtcaaacatttcaatttccaatacactgatttcactaaatttcataaaagttaac 34861226  T
Q  289 catttaaagtccttaactagtgcccc 314  Q
     |||||| ||| ||||| ||||||||    
T  34861225 tatttaaggtcattaacgagtgcccc 34861200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 4040891 - 4041007
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||||||  |||||||||||||||||   ||||| |||||||||||||||||| ||||  ||| |||||||||| ||||| ||||||||| |||||    
T  4040891 tctttaagcattttaaattaagtaattattacataaaagtgtcaaagttttcaattttcaatatacttattacacaaactttcacaaaaagttatcattt 4040990  T
Q  294 aaagtccttaactagtg 310  Q
    |||||||||||||||||    
T  4040991 aaagtccttaactagtg 4041007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 40286856 - 40286972
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| |||||| |||| |||||| ||| |||||   |||||||||||||||||||||||||| |||||||| ||| |||||||||||| ||||    
T  40286856 tctttaagcatgctaaataaagtcattattctttcaaaattaaaaagttttcaatttccaatgcactgagtacacaaacttttataaaaagttactattt 40286955  T
Q  294 aaagtccttaactagtg 310  Q
    ||||| |||||||||||    
T  40286956 aaagttcttaactagtg 40286972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 3047860 - 3047966
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||||||| ||||||||||||||| || ||||||||||||||| ||||| |||||||||||| |||||| ||||| ||||||||||| ||||    
T  3047860 ggcactctttaagcatgctaaattaagtaattgttctttaaaaatgtcaaatttttcgatttccaatgcattgattaaacaaactttcataaaaaattac 3047959  T
Q  289 catttaa 295  Q
     ||||||    
T  3047960 tatttaa 3047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 38172665 - 38172762
Alignment:
Q  216 taattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 313  Q
    |||||||| ||||||||||| |||||||| |||||  ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||||||    
T  38172665 taattattctttaaaaatgtaaaagtttttaatttttaatgcactgattacacaaacttttataaaaagttatcatttaaagtccttaacaagtgccc 38172762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 194 - 314
Target Start/End: Original strand, 49478810 - 49478931
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 292  Q
    |||||||||||  | | |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||  || |||||||||||||    
T  49478810 tctttaagcatgttgagttaagtaattattttttttaaatgtcaaaagttttcaatttccaatgcactgattacacaaacttctatgaaaagttaccatt 49478909  T
Q  293 taaagtccttaactagtgcccc 314  Q
    |||  |||||||| ||||||||    
T  49478910 taagttccttaaccagtgcccc 49478931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 196 - 304
Target Start/End: Original strand, 40053293 - 40053401
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    ||||||||| |||||||| |||||| || |||||||||||||||||||||||||| |||| || | |||||||||| |||||||||||||||| ||||||    
T  40053293 tttaagcattctaaattaggtaattgttctttaaaaatgtcaaagttttcaattttcaatacatttattacacaaactttcataaaaagttactatttaa 40053392  T
Q  296 agtccttaa 304  Q
     ||| ||||    
T  40053393 ggtcattaa 40053401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 189 - 293
Target Start/End: Complemental strand, 42573882 - 42573778
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||||||| |||||||||||||||||| ||| ||||||| || ||||||||||| |||||||||||||| ||||| ||  ||||||||||||    
T  42573882 ggcactctttaagcatgctaaattaagtaattattcttttaaaatgttaaggttttcaattttcaatgcactgattatacaaacttcaataaaaagttac 42573783  T
Q  289 cattt 293  Q
    |||||    
T  42573782 cattt 42573778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 48991 - 48874
Alignment:
Q  197 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    |||| ||| |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||| |||| || |||     
T  48991 ttaatcatgctaaattaagtaattattcttgaaaaatgtaaaagttttcaattttcaatgcaccgattacacaaactttcataaaaatttactatgtaag 48892  T
Q  297 gtccttaactagtgcccc 314  Q
    || |||||  ||||||||    
T  48891 gttcttaatgagtgcccc 48874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 313
Target Start/End: Complemental strand, 35543509 - 35543392
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||  | | |||||||||| |||  || |||||||||||||||    
T  35543509 tttaagcatgctaaattaagtaattatttttttaaaatatcaaagttttcaatttccaatatattaattacacaaacttttgtacaaagttaccatttaa 35543410  T
Q  296 agtccttaactagtgccc 313  Q
     ||| ||||  |||||||    
T  35543409 ggtctttaataagtgccc 35543392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 290601 - 290701
Alignment:
Q  206 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| ||  || ||||||||  |||||| || ||||||    
T  290601 ctaaattaagtaattattcttttaaaatgtcaaagttttcaatttacaatgcactgattacacaaacttcaatgaaaagttattatttaacgttcttaac 290700  T
Q  306 t 306  Q
    |    
T  290701 t 290701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 24034054 - 24034166
Alignment:
Q  193 ttctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 292  Q
    |||||||||||||||||||  |||||||||| ||| ||||| | ||||||||||||||| ||||||||||||||||||| | | ||||||  |||| |||    
T  24034054 ttctttaagcatactaaatagagtaattattctttcaaaatttaaaagttttcaatttctaatgcactgattacacaaactcttataaaagtttactatt 24034153  T
Q  293 taaagtccttaac 305  Q
    |||||||| ||||    
T  24034154 taaagtccataac 24034166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 207 - 309
Target Start/End: Complemental strand, 51904664 - 51904562
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 306  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |  | |||||||| ||||||||||| || | |||||| ||||||||||    
T  51904664 taaattaagtaattattcttttaaaatgttaaagttttcaatttccaatgccccaactacacaaactttcataaaaaattgcaatttaaggtccttaact 51904565  T
Q  307 agt 309  Q
    |||    
T  51904564 agt 51904562  T

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Target: chr1; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 1656447 - 1656548
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||  | | ||||||| ||||||||||||||||  |||||| ||| |||||    
T  1656447 taaattaaataattattttttaaaaatgtcaaaattttcaatttccaatgcattttaatacacaatttttcataaaaagttattatttaaggtcattaac 1656546  T
Q  306 ta 307  Q
    ||    
T  1656547 ta 1656548  T

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Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 298
Target Start/End: Complemental strand, 10355135 - 10355031
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||| || |||||| ||||||||||||||||||||| || || |||||||||||||||  || |||| |||||| || |||||||| |||||||||    
T  10355135 tctttaagtattctaaataaagtaattattttttaaaaatatctaaattttcaatttccaatataccgatttcacaaacttccataaaaaattaccattt 10355036  T
Q  294 aaagt 298  Q
    |||||    
T  10355035 aaagt 10355031  T

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Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 31652643 - 31652740
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    ||||||||| |||||| ||||||  ||| ||||||| ||||| |||||||||| |||||||| | | |||||||||||||| ||||||||||||||||    
T  31652643 aattattttataaaaaagtcaaatattttaatttccgatgcaatgattacacatattttcatgataggttaccatttaaagcccttaactagtgcccc 31652740  T

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Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 46804932 - 46804819
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| ||||||||| |||| ||||||||||||||  ||| |||  ||||||||||||||||||||||  || |||||||| |  |||||||||    
T  46804932 tctttaagcattctaaattaattaataattttttaaaaatgataaactttctaatttccaatgcactgattacattaactttcataatagtttaccattt 46804833  T
Q  294 aaagtccttaacta 307  Q
    || ||| |||||||    
T  46804832 aaggtcattaacta 46804819  T

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Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 307
Target Start/End: Complemental strand, 759333 - 759221
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 294  Q
    ||||||||| ||||||||| |||| ||||  ||||| ||||||||||| ||||||||||| ||| | |||||||||| || |||||||  ||||||||||    
T  759333 tttaagcattctaaattaaataatcatttcataaaattgtcaaagtttccaatttccaatacactttattacacaaacttacataaaagattaccattta 759234  T
Q  295 aagtccttaacta 307  Q
    |||| ||||||||    
T  759233 aagttcttaacta 759221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 30548293 - 30548387
Alignment:
Q  216 taattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 311  Q
    |||| ||||||||||| || |||| ||||||||||||||| |||||||||||| || ||||||||||  ||||||||||| || ||||||||||||    
T  30548293 taatcattttttaaaattgacaaacttttcaatttccaatacactgattacactaactttcataaaagtttaccatttaaggt-cttaactagtgc 30548387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 40203163 - 40203076
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    ||||||||  |||||| ||||||  ||||||||||||||||| |||||||||| ||||||| | ||||||||||||||||| ||||||    
T  40203163 aattatttcataaaaaagtcaaatatttcaatttccaatgcattgattacacatattttcagacaaagttaccatttaaagaccttaa 40203076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 281
Target Start/End: Complemental strand, 31807886 - 31807800
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaa 281  Q
    ||||||||| ||||| |||||||||||| ||||||||||| | |||||||||||| |||||||| | |||||||||| |||||||||    
T  31807886 tttaagcattctaaaataagtaattattctttaaaaatgtgatagttttcaattttcaatgcactttattacacaaactttcataaa 31807800  T

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Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 40341599 - 40341718
Alignment:
Q  194 tctttaagcatactaaattaagtaattatttt-ttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 292  Q
    |||||||| || ||||||||||||||| ||||   |||||| ||||| |||||||||| ||||||||  ||||||| || ||||||||||  |||| |||    
T  40341599 tctttaagtattctaaattaagtaatttttttaaaaaaaatatcaaacttttcaattttcaatgcaccaattacactaactttcataaaagtttacgatt 40341698  T
Q  293 taaagtccttaactagtgcc 312  Q
    ||| |||||||| |||||||    
T  40341699 taaggtccttaattagtgcc 40341718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 9931801 - 9931875
Alignment:
Q  222 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    |||||| |||||||||||||||||||||| |||| || | |||||||||| ||| ||||||| ||||||||||||    
T  9931801 tttttttaaaatgtcaaagttttcaattttcaatacattaattacacaaacttttataaaaaattaccatttaaa 9931875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 310
Target Start/End: Complemental strand, 290957 - 290841
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| ||||||  |||||||||| ||| ||||| | |||||||| |||||||||||| |||| |||||| | ||| |||||| ||||| || |    
T  290957 tctttaagcatgctaaatagagtaattattctttcaaaatttaaaagtttttaatttccaatgcgctgactacacatacttttataaaaggttactatct 290858  T
Q  294 aaagtccttaactagtg 310  Q
    || ||| ||| ||||||    
T  290857 aaggtctttagctagtg 290841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 282
Target Start/End: Original strand, 26700247 - 26700335
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 282  Q
    ||||||| |||||||||| ||||||||||| ||| |||||   |||||||| |||||||||| |||| |||||||||| ||| ||||||    
T  26700247 tctttaaacatactaaataaagtaattattcttttaaaattaaaaagtttttaatttccaatacactcattacacaaacttttataaaa 26700335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 314
Target Start/End: Complemental strand, 12148354 - 12148287
Alignment:
Q  247 atttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    |||||||||||| || ||||||| |||||||| | |||||||||||||||| | ||||||||||||||    
T  12148354 atttccaatgcattggttacacatattttcatgataagttaccatttaaagactttaactagtgcccc 12148287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 305
Target Start/End: Original strand, 44461597 - 44461683
Alignment:
Q  218 attattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    |||||| ||| |||||||||||||||| |||||  |||||| | |||||||||||||||||||||| |||| ||||||| || |||||    
T  44461597 attattcttttaaaatgtcaaagtttttaatttttaatgca-taattacacaaattttcataaaaatttactatttaaaatctttaac 44461683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 32787351 - 32787261
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaa 296  Q
    ||||||||||||||| | ||||||||||| ||||| ||||||| | ||| || |  |||||||||||||| |||||||||||| |||||||    
T  32787351 taaattaagtaattaatctttaaaaatgttaaagtgttcaattcctaatacattttattacacaaatttttataaaaagttactatttaaa 32787261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 295
Target Start/End: Complemental strand, 31398519 - 31398418
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||| | |||||||||| |||||||||||| ||||||| ||| |||| |||||  |||| ||  |||||| ||||||| ||||||| |||| ||||    
T  31398519 tctttaagtagactaaattaaataattatttttttaaaatgtgaaattttttaatttataatgtaccaattacataaatttttataaaaaattactattt 31398420  T
Q  294 aa 295  Q
    ||    
T  31398419 aa 31398418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 45753482 - 45753551
Alignment:
Q  228 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 297  Q
    ||||||||||||  ||||||||| ||||||| |||||||||||||||||| ||||  ||| |||||||||    
T  45753482 aaaaatgtcaaatatttcaattttcaatgcattgattacacaaattttcaaaaaacattatcatttaaag 45753551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 310
Target Start/End: Original strand, 24075110 - 24075214
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    |||||||| ||||  || ||||||||||||||||| || ||||| |||||||| | |||| | ||||||||| |||| |||| ||||||||||| |||||    
T  24075110 taaattaaataatatttctttaaaaatgtcaaagtgtttaattttcaatgcactttattatataaattttcaaaaaatgttatcatttaaagtctttaac 24075209  T
Q  306 tagtg 310  Q
     ||||    
T  24075210 cagtg 24075214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 313
Target Start/End: Original strand, 40377067 - 40377159
Alignment:
Q  221 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 313  Q
    ||||| |||||| ||||||  |||  ||| ||||| || ||||||||||| ||||||| | || ||||||||||||| |||||||||||||||    
T  40377067 attttataaaaaagtcaaatattttgattcccaattcattgattacacaacttttcatgataaattaccatttaaaggccttaactagtgccc 40377159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 5115691 - 5115612
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    |||||| || |||||| || |||  ||||||||||||||||| | ||||||||||||| || ||||| ||||||||||||    
T  5115691 aattatgttataaaaaagttaaatatttcaatttccaatgcattaattacacaaatttacaaaaaaatttaccatttaaa 5115612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 281
Target Start/End: Complemental strand, 33744243 - 33744156
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 281  Q
    |||||||||||  |||| |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||| |  ||||||||||    
T  33744243 tctttaagcattttaaaataagtaattatttttttaaaaagtcaaatatttcgattttcaatgcattgattacatattttttcataaa 33744156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 4521121 - 4521043
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 267  Q
    |||| |||||||||||||||||  |||  |||||| |||||||| || |||  ||||||||||||||||| ||||||||    
T  4521121 ggcactctttaagcatactaaaacaagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 4521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 27934837 - 27934747
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaaa 283  Q
    ||||||||||| ||||||||| |||||||| ||||||||| |||||  ||||||||| |||| | | | |||||||||| ||| |||||||    
T  27934837 tctttaagcattctaaattaaataattattatttaaaaatatcaaaagtttcaattttcaatacaatttattacacaaacttttataaaaa 27934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 310
Target Start/End: Complemental strand, 30350978 - 30350911
Alignment:
Q  241 ttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtg 310  Q
    |||||||||| ||||||| ||||||||| || |||||||||  |||||||||||| ||| ||||||||||    
T  30350978 ttttcaattttcaatgcattgattacactaactttcataaa--gttaccatttaaggtctttaactagtg 30350911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 315
Target Start/End: Complemental strand, 36321738 - 36321612
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||||||||| |||  ||||||||||| |||| ||| || |||  |||| |||||||||||| ||||||||   ||||| ||||| | || |    
T  36321738 ggcactctttaagcataccaaaacaagtaattattctttagaaaagttaaacatttcgatttccaatgcattgattacatgtatttttataaatacttgc 36321639  T
Q  289 catttaaagtccttaactagtgcccca 315  Q
     ||||| |||||||||  |||||||||    
T  36321638 tatttatagtccttaaagagtgcccca 36321612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 315
Target Start/End: Original strand, 39807557 - 39807643
Alignment:
Q  230 aaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccca 315  Q
    |||||| ||| |||||||||| |||||||||  |||||| ||| |||| ||||||| | ||||| |||||| |||||||||||||||    
T  39807557 aaatgttaaaattttcaattttcaatgcactttattacataaactttcgtaaaaagctgccattgaaagtctttaactagtgcccca 39807643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 295
Target Start/End: Complemental strand, 5423858 - 5423753
Alignment:
Q  190 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacc 289  Q
    |||||||||||||||  |||||||   ||||||| |||||||| || |||   |||||||| ||||||| | | |||| || |||||||||||| |||||    
T  5423858 gcattctttaagcattttaaattagaaaattattctttaaaaaagttaaatagttcaattttcaatgcattaaatacataagttttcataaaaaattacc 5423759  T
Q  290 atttaa 295  Q
    ||||||    
T  5423758 atttaa 5423753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 25302103 - 25302172
Alignment:
Q  227 taaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    |||||| ||||||| |||| |||| |||| || |||||||||| |||||||| | |||||||||||||||    
T  25302103 taaaaaagtcaaagatttcgattttcaatacattgattacacatattttcatgataagttaccatttaaa 25302172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 47364098 - 47364049
Alignment:
Q  247 atttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    ||||| |||| |||||||||||||||||||||||||| ||| ||||||||    
T  47364098 atttctaatgaactgattacacaaattttcataaaaatttatcatttaaa 47364049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 314
Target Start/End: Complemental strand, 50974659 - 50974562
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    ||||||||| |||||| ||||||  ||||||||| | ||||| | |||||| | |||||||| | || |||||||||||||  |||||| ||||||||    
T  50974659 aattattttataaaaaagtcaaatatttcaattttcgatgcattaattacatatattttcatgataaattaccatttaaaggtcttaacgagtgcccc 50974562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 37037640 - 37037720
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 269  Q
    ||||||||||||||||  ||||   ||||||||||||| ||||| || |||  |||||||||||||| || ||||||||||    
T  37037640 ggcattctttaagcattttaaaaatagtaattatttttaaaaaaagttaaatgtttcaatttccaatacattgattacaca 37037720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 295
Target Start/End: Original strand, 44442261 - 44442349
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    ||||||| | ||||||| |||||||| ||||||  ||||||||| |||| || | | |||||| ||||| |||||||||||| ||||||    
T  44442261 taaattaggaaattattctttaaaaaagtcaaatatttcaattttcaatacattaaatacacatatttttataaaaagttactatttaa 44442349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 4220739 - 4220636
Alignment:
Q  192 attctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccat 291  Q
    |||||||||||||   |||||| | ||||||||||||| || ||||||  ||| |||||| ||  || |||||| ||||| ||||||| ||| |||||||    
T  4220739 attctttaagcatttcaaattatgaaattattttttaagaaagtcaaatattttaatttctaacacattgattatacaaaatttcatagaaacttaccat 4220640  T
Q  292 ttaa 295  Q
    ||||    
T  4220639 ttaa 4220636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 304
Target Start/End: Original strand, 14758572 - 14758667
Alignment:
Q  209 aattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    ||||||| |||||||  ||||||| ||  ||  ||||||||| | ||||| ||| | ||||| |||||||||||| |||| |||||||||||||||    
T  14758572 aattaagaaattattccttaaaaaagtttaacatttcaattttcgatgcattgaatgcacaatttttcataaaaatttactatttaaagtccttaa 14758667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 312
Target Start/End: Complemental strand, 31745492 - 31745397
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 312  Q
    ||||||||| ||| || ||||||  |||| |||  | ||||| |||||||||| ||||| || | ||||||| |||||||| ||||||||||||||    
T  31745492 aattattttataataaagtcaaatatttcgattctcgatgcattgattacacatatttttatgataagttactatttaaaggccttaactagtgcc 31745397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 297
Target Start/End: Complemental strand, 34596180 - 34596125
Alignment:
Q  242 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 297  Q
    |||| |||| ||||||| |||||||||| | ||||||||||||||| |||||||||    
T  34596180 tttcgattttcaatgcattgattacacataatttcataaaaagttatcatttaaag 34596125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 43216382 - 43216299
Alignment:
Q  212 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    |||||||||||||||| |||||| |||| ||| ||||||  |||| |||| |||||| || ||||||||||  |||| ||||||    
T  43216382 taagtaattattttttgaaaatgacaaattttccaatttttaatgaactggttacactaactttcataaaagtttactatttaa 43216299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 9590913 - 9590967
Alignment:
Q  242 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    |||| |||| ||||| | |||||||||| |||||||||||| |||||||||||||    
T  9590913 tttcgatttacaatgtattgattacacacattttcataaaatgttaccatttaaa 9590967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 44719239 - 44719297
Alignment:
Q  254 atgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 312  Q
    ||||| |||||||||| |||||||| | || |||||||||||||  |||||||||||||    
T  44719239 atgcaatgattacacacattttcatgataaattaccatttaaagctcttaactagtgcc 44719297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 5251009 - 5250920
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    ||||||| |||||||||||| | | ||||| |||||||| ||||||   || ||||| ||||| | | | ||||||||||||||||||||    
T  5251009 tctttaaacatactaaattaggaagttattctttaaaaaagtcaaacagtttaattttcaatgtattaaatacacaaattttcataaaaa 5250920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 7750463 - 7750532
Alignment:
Q  228 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 297  Q
    ||||| ||||||  ||||||||||||||||| | |||| | || |||||| ||||||||||| |||||||    
T  7750463 aaaaaagtcaaatgtttcaatttccaatgcattaattatataacttttcaaaaaaagttaccttttaaag 7750532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 8791530 - 8791485
Alignment:
Q  212 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgc 257  Q
    |||||||||| | ||||||||||| |||||||||||||| ||||||    
T  8791530 taagtaattagtctttaaaaatgtaaaagttttcaattttcaatgc 8791485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 18038940 - 18039001
Alignment:
Q  243 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||  || ||||||| ||||    
T  18038940 ttcaatttccgatgcattgaatacacaaattttcataaaaaattattatctaaagtctttaa 18039001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 19533280 - 19533321
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaat 248  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||    
T  19533280 taaattaagcaattattttttaaaaatatcaaacttttcaat 19533321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 309
Target Start/End: Complemental strand, 38320636 - 38320538
Alignment:
Q  210 attaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgatta-cacaaattttcataaaaagttaccatttaaagtccttaactag 308  Q
    |||||||||||||| ||||||| | | ||| ||||| ||||| || |||||  ||| |||| ||||| ||||||||||||||||| ||||  ||||||||    
T  38320636 attaagtaattattctttaaaattattaaaattttcgatttctaaagcact--ttatcacacattttaataaaaagttaccatttgaagtttttaactag 38320539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 42564262 - 42564298
Alignment:
Q  260 tgattacacaaattttcataaaaagttaccatttaaa 296  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  42564262 tgataacacaaattttcaaaaaaagttaccatttaaa 42564298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 297
Target Start/End: Complemental strand, 50222688 - 50222612
Alignment:
Q  221 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 297  Q
    ||||| ||||||  |||||  ||| ||||| ||||||| |||||||||  ||||||||||||| |||| ||||||||    
T  50222688 attttataaaaaaatcaaatattttaattttcaatgcattgattacacttattttcataaaaaattactatttaaag 50222612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 191 - 314
Target Start/End: Original strand, 8237945 - 8238068
Alignment:
Q  191 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacca 290  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||    
T  8237945 cattatttaagtatactaaattaagtaattattctttaaaaatgtcaaagttttcatttttcaatgcactgattacacaaactttcataaaaagttacca 8238044  T
Q  291 tttaaagtccttaactagtgcccc 314  Q
    ||||| ||||||||||| ||||||    
T  8238045 tttaaggtccttaactaatgcccc 8238068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 19619993 - 19620101
Alignment:
Q  197 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||     
T  19619993 ttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaatttccaatgcactgattatacaacttttcataaaaagttactatttaag 19620092  T
Q  297 gtccttaac 305  Q
    | |||||||    
T  19620093 gcccttaac 19620101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 34299849 - 34299731
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    ||||||||| ||| |||||| ||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||    
T  34299849 tttaagcatgctagattaagcaattattctttaaaaatgtcaaagttttcaatttacaaagcactgattacacaaactttcataaaaagttactatttaa 34299750  T
Q  296 agtccttaactagtgcccc 314  Q
     ||||||||| | ||||||    
T  34299749 ggtccttaaccaatgcccc 34299731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 5907817 - 5907941
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||||||| |||||||||||||||||||||| ||| ||||||| ||||  |||||||||||||| ||||||| |||||||||||||  ||||    
T  5907817 ggcactctttaagcattctaaattaagtaattatttttttaaa-tgtcaaacttttttatttccaatgcactaattacactaattttcataaaagtttac 5907915  T
Q  289 catttaaagtccttaactagtgcccc 314  Q
     |||||||||||||||||||||||||    
T  5907916 tatttaaagtccttaactagtgcccc 5907941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 315
Target Start/End: Complemental strand, 5482503 - 5482395
Alignment:
Q  206 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||||||||||| || ||||||||| |||||||||||||||| ||||||||||||||||    
T  5482503 ctaaattaagtaattattcttttaaaatgtcaaagttttca-tttccaatgcattggttacacaaaatttcataaaaagttacaatttaaagtccttaac 5482405  T
Q  306 tagtgcccca 315  Q
      ||||||||    
T  5482404 ccgtgcccca 5482395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 43492310 - 43492189
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 292  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||| ||| ||||||||||||||| | |||||||||| ||| ||||||||||||||||    
T  43492310 tctttaagcattctaaattaagtaattattctttagaaatgtcaaaatttacaatttccaatgcactttattacacaaactttaataaaaagttaccatt 43492211  T
Q  293 taaagtccttaactagtgcccc 314  Q
    ||||  ||||||  ||||||||    
T  43492210 taaatcccttaatcagtgcccc 43492189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 44452150 - 44452038
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 292  Q
    ||||||| ||| |||||||||||||||||| ||||||||| |||||  |||||||||||||||||| | |||||||||| ||||||||||| |||| |||    
T  44452150 tctttaaacattctaaattaagtaattattatttaaaaatatcaaaagtttcaatttccaatgcactttattacacaaactttcataaaaaattactatt 44452051  T
Q  293 taaagtccttaac 305  Q
    ||||||| |||||    
T  44452050 taaagtcattaac 44452038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 287
Target Start/End: Complemental strand, 24299237 - 24299146
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 287  Q
    |||||||||  ||||||||| |||||||  |||||||||||||| |||| |||||||||||||||||||| |||| ||||||||||||||||    
T  24299237 tttaagcatgttaaattaagaaattattccttaaaaatgtcaaattttttaatttccaatgcactgattatacaacttttcataaaaagtta 24299146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 193 - 314
Target Start/End: Complemental strand, 24610947 - 24610826
Alignment:
Q  193 ttctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 292  Q
    |||||||| ||| |||||||||  ||||||| ||| ||||||| |||||||| |||||| ||| |||| |||||||||| ||| ||||||| ||| ||||    
T  24610947 ttctttaaacatgctaaattaaacaattattcttttaaaatgttaaagttttgaatttctaattcactaattacacaaacttttataaaaaattatcatt 24610848  T
Q  293 taaagtccttaactagtgcccc 314  Q
    |||||||||||||  |||||||    
T  24610847 taaagtccttaacccgtgcccc 24610826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 3267718 - 3267598
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| |||||| ||||||||||| ||| ||||| | ||||||||| |||| ||||||||| |||||||||| ||| ||||||| || | ||||    
T  3267718 tctttaagcatgctaaataaagtaattattcttttaaaatttaaaagttttccattttcaatgcactcattacacaaacttttataaaaacttgctattt 3267619  T
Q  294 aaagtccttaactagtgcccc 314  Q
     | ||||||||| ||||||||    
T  3267618 taggtccttaaccagtgcccc 3267598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 41150121 - 41150034
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    |||||||||  ||||||||||||||||| ||||||| ||| |||| ||||||||  |||||||||||||| |||||||||||||||||    
T  41150121 tttaagcatcataaattaagtaattattctttaaaagtgttaaagatttcaattcacaatgcactgattatacaaattttcataaaaa 41150034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 25037076 - 25036962
Alignment:
Q  191 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttacc 289  Q
    |||| |||||||||  ||||||||||||||||| |||||||| |||||| |||| ||||| |||||||| | ||| |||||| ||||||| ||||||||     
T  25037076 cattttttaagcattttaaattaagtaattattatttaaaaaggtcaaaatttttaattttcaatgcactttattgcacaaactttcatagaaagttaca 25036977  T
Q  290 atttaaagtccttaa 304  Q
    ||||||| |||||||    
T  25036976 atttaaaatccttaa 25036962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 298
Target Start/End: Complemental strand, 39316401 - 39316297
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||||||| ||||||||||||||||| || || ||||||||| ||||||||||  | || |||| ||||||||  |||||||||||||||  ||||    
T  39316401 tctttaagcatattaaattaagtaattattcttcaataatgtcaaaattttcaatttttactgtactggttacacaagctttcataaaaagttataattt 39316302  T
Q  294 aaagt 298  Q
    |||||    
T  39316301 aaagt 39316297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 315
Target Start/End: Original strand, 26871771 - 26871890
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    ||||||||| |||||| ||||||||||| ||| ||||| | |||||||| ||||| || |  |||||||||||||| ||| ||||||| |||| ||||||    
T  26871771 tttaagcatgctaaataaagtaattattcttttaaaatttaaaagttttgaattttcattatactgattacacaaacttttataaaaaattactatttaa 26871870  T
Q  296 agtccttaactagtgcccca 315  Q
     ||||||||| ||| |||||    
T  26871871 ggtccttaaccagtacccca 26871890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 34681685 - 34681791
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||||||| |||||||| | |||||||||||| ||| ||||||   |||||||||||||||| | | ||||||| |||| ||||||||||||    
T  34681685 ggcagtctttaagcattctaaattaggaaattattttttacaaaagtcaaatagttcaatttccaatgcattaaatacacaagtttttataaaaagttac 34681784  T
Q  289 catttaa 295  Q
     ||||||    
T  34681785 tatttaa 34681791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 310
Target Start/End: Complemental strand, 23682559 - 23682444
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| ||| ||||||||| |||||||||||| |||||||||||||||| ||||| |||| || |||| | ||||| ||| ||||||||||||| |||    
T  23682559 tctttaaacattctaaattaaataattatttttt-aaaatgtcaaagtttttaattttcaat-caatgataagacaaacttttataaaaagttacccttt 23682462  T
Q  294 -aaagtccttaactagtg 310  Q
     ||||||||||| |||||    
T  23682461 aaaagtccttaattagtg 23682444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 312
Target Start/End: Original strand, 39241570 - 39241687
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 294  Q
    |||||||||  ||||||||| ||||||| ||||||||||||| |  |||||||||||||||| |||||||| || |  ||||||||||  |||||||||     
T  39241570 tttaagcattataaattaagcaattattctttaaaaatgtcataccttttcaatttccaatggactgattatactagctttcataaaagtttaccatttt 39241669  T
Q  295 aagtccttaactagtgcc 312  Q
    | ||||||||| ||||||    
T  39241670 aggtccttaaccagtgcc 39241687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 302
Target Start/End: Original strand, 7432656 - 7432743
Alignment:
Q  216 taattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtcctt 302  Q
    |||||||| ||||||||| | |||||||| ||||| |||||||||  ||| |||||| ||| ||||||||||||||||||||||||||    
T  7432656 taattattatttaaaaatattaaagtttttaattttcaatgcactttattgcacaaacttttataaaaagttaccatttaaagtcctt 7432743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 304
Target Start/End: Original strand, 38988717 - 38988816
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaat-tttcataaaaagttaccatttaaagtccttaa 304  Q
    ||||||||||||| ||||||||| ||||| ||||| || |||||||||||||| | |||||| |||| ||| ||||||||||| |||||||||| |||||    
T  38988717 taaattaagtaataattttttaataatgttaaagtgtttaatttccaatgcactttattacataaatattttataaaaagttatcatttaaagtgcttaa 38988816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 294
Target Start/End: Original strand, 18926320 - 18926425
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| |||||||||||  ||||| | | ||||||| |||||||| || |||   |||||||| ||||||| ||| ||||||| |||||||||||||||||    
T  18926320 ggcactctttaagcattttaaatcatgaaattattctttaaaaaggtgaaatagttcaattttcaatgcattgaatacacaacttttcataaaaagttac 18926419  T
Q  289 cattta 294  Q
    ||||||    
T  18926420 cattta 18926425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 31498737 - 31498660
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 271  Q
    ||||||| ||| ||||||||||||| |||||||| ||||||| |||||||||||||| |||| || ||||| ||||||    
T  31498737 tctttaaacattctaaattaagtaaatatttttttaaaatgttaaagttttcaattttcaatacattgattgcacaaa 31498660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 46716177 - 46716266
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    ||||||| ||| ||||||||| |||||||| ||||||||| |||||||||||||| | ||||||| | |||| ||||| ||| |||||||    
T  46716177 tctttaaccattctaaattaaataattattctttaaaaatatcaaagttttcaatgttcaatgcattaattatacaaacttttataaaaa 46716266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 10032029 - 10031909
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| | ||| | |||||||||||||| |||| || |||  |||| |||||||||||| ||||||||||  |||||||||| |  ||| ||||    
T  10032029 tctttaagcattccaaaattagtaattatttttttaaaaagttaaatgtttcgatttccaatgcattgattacacactttttcataaatacatactattt 10031930  T
Q  294 aaagtccttaactagtgcccc 314  Q
    | |||||||||  ||||||||    
T  10031929 atagtccttaaagagtgcccc 10031909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 308
Target Start/End: Original strand, 38452192 - 38452283
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactag 308  Q
    ||||||||| |||||| ||||||  ||||||||||| ||||| || ||||||| |||||||||| || ||| | ||||||| ||||||||||    
T  38452192 aattattttataaaaaagtcaaatatttcaatttccgatgcattggttacacatattttcataataaattatcttttaaaggccttaactag 38452283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 305
Target Start/End: Complemental strand, 26872891 - 26872781
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagttaccattta 294  Q
    ||||||||| |||||| ||||||||||| |||| |||| |||||  |||||||||||||||||  | |||| ||||| ||||| ||||| |||  |||||    
T  26872891 tttaagcattctaaatcaagtaattattatttataaatatcaaaagtttcaatttccaatgcattttattatacaaactttcacaaaaaattattattta 26872792  T
Q  295 aagtccttaac 305  Q
    ||||| |||||    
T  26872791 aagtctttaac 26872781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 35395904 - 35395962
Alignment:
Q  192 attctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaattt 250  Q
    |||||||||| || ||| |||||||||||||||||||||||| |||||||||| |||||    
T  35395904 attctttaagtattctatattaagtaattattttttaaaaatatcaaagtttttaattt 35395962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 47507603 - 47507713
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| |||||||| || |||||  ||| ||| ||||| ||||||  |||||| ||||||||||| ||| | ||||||||||  ||||||| | |||||||    
T  47507603 ggcactctttaaggattctaaaagaagaaataattttataaaaaaatcaaagatttcaatttccgatgtattgattacacattttttcatgagaagttac 47507702  T
Q  289 catttaaagtc 299  Q
    |||||||||||    
T  47507703 catttaaagtc 47507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 281
Target Start/End: Complemental strand, 3256740 - 3256648
Alignment:
Q  190 gcattctttaagcatactaaattaagtaattattttttaaaaat-gtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 281  Q
    |||||||||||||||   ||| |||| ||||||| ||||||||  ||||||  |||| |||||||||||||||| |||||| |||||||||||    
T  3256740 gcattctttaagcatttcaaaataagcaattattctttaaaaaaagtcaaatgtttcgatttccaatgcactgaatacacatattttcataaa 3256648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 9097802 - 9097683
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||||||||  |||  |||||||||  |||||  |||||  ||||||||||||||||| | | |||||| ||||||||||| | |||||| ||    
T  9097802 tctttaagcatactaatataaacaattattttaaaaaaaa-tcaaatatttcaatttccaatgcaattaatacacacattttcataaatacttaccactt 9097704  T
Q  294 aaagtccttaactagtgcccc 314  Q
      |||| ||||||||||||||    
T  9097703 gtagtctttaactagtgcccc 9097683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 32699395 - 32699447
Alignment:
Q  235 tcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 287  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||||||    
T  32699395 tcaaaattttcaatttcaaatgcactgattgcacaaactttcataaaaagtta 32699447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 293
Target Start/End: Complemental strand, 41431199 - 41431099
Alignment:
Q  194 tctttaagcatactaaattaagtaattatttttt-aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 292  Q
    |||||||||||  ||||||||| ||||||||||| |||||  | |||  |||||||||| |||| | ||||||| || ||||||||||||| ||||||||    
T  41431199 tctttaagcattttaaattaagaaattatttttttaaaaaaattaaatatttcaatttctaatgtattgattactcatattttcataaaaacttaccatt 41431100  T
Q  293 t 293  Q
    |    
T  41431099 t 41431099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 1360534 - 1360609
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 269  Q
    ||||||||||| | ||| | ||||||||||||||||||| || |||  |||| |||||||||||| ||||||||||    
T  1360534 tctttaagcattccaaaattagtaattattttttaaaaaagttaaatgtttcgatttccaatgcattgattacaca 1360609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 27123267 - 27123393
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttc-ataaaaagtta 287  Q
    |||| ||||||||||| | ||||| |||||| ||| ||| |||| |||||   || |||||||||||||| | | ||||||| |||||  |||||| |||    
T  27123267 ggcactctttaagcatcccaaatttagtaatcattcttttaaaaagtcaactattacaatttccaatgcattaagtacacaacttttcgttaaaaactta 27123366  T
Q  288 ccatttaaagtccttaactagtgcccc 314  Q
    ||||||||||| |||||  ||||||||    
T  27123367 ccatttaaagtgcttaaagagtgcccc 27123393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 33887960 - 33887887
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 267  Q
    ||||||||||| | ||| ||| |||||||| |||||||| ||||||  ||||||||| ||||||| ||||||||    
T  33887960 tctttaagcattccaaaataaataattattctttaaaaaagtcaaatatttcaattttcaatgcattgattaca 33887887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 298
Target Start/End: Complemental strand, 35496681 - 35496576
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagttaccatt 292  Q
    ||||||||||| | ||||| ||||| ||| |||| |||| |||||   || |||||| ||||||| | ||||||||| |||||| |||||| ||||||||    
T  35496681 tctttaagcatccaaaatttagtaactatatttttaaaaagtcaactattacaattttcaatgcattcattacacaatttttcattaaaaacttaccatt 35496582  T
Q  293 taaagt 298  Q
    ||||||    
T  35496581 taaagt 35496576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 35599910 - 35599817
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 287  Q
    ||||||| |||||||||||| | ||||||| ||||||||  |||||   ||||| || ||||||| ||| |||| || ||||||||||||||||    
T  35599910 tctttaaacatactaaattaggaaattattctttaaaaaattcaaatagttcaaatttcaatgcattgaatacataacttttcataaaaagtta 35599817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 47305567 - 47305514
Alignment:
Q  261 gattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    ||||||||| |||||||| | |||||||||||||||  ||||||||||||||||    
T  47305567 gattacacatattttcatgataagttaccatttaaacaccttaactagtgcccc 47305514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 48837977 - 48838025
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatg 256  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  48837977 taaattaaataattatttt-taaaaatatcaaagttttcaatttccaatg 48838025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 31902839 - 31902747
Alignment:
Q  212 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    |||| |||||||  |||| || ||||||  ||||||||| |||| || ||| ||||||| ||| |||||||| |||| |||||||||||||||    
T  31902839 taagaaattattccttaagaaagtcaaatatttcaattttcaatacattgactacacaattttccataaaaatttactatttaaagtccttaa 31902747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 6392179 - 6392237
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttcc 252  Q
    ||||||||||| |||||||||| ||||||| ||| ||||  | ||||||||||||||||    
T  6392179 tctttaagcattctaaattaagaaattattctttcaaaacttaaaagttttcaatttcc 6392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 315
Target Start/End: Original strand, 8170052 - 8170150
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccca 315  Q
    ||||||||| |||||| ||||||  |||  |||||| || || |||||| ||| || ||||| | |||||||  ||||||| |||||||||||||||||    
T  8170052 aattattttataaaaaagtcaaatattttgatttccgatacattgattatacatatgttcatgataagttactttttaaagaccttaactagtgcccca 8170150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 10453485 - 10453539
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 271  Q
    ||||||| ||||||||| | ||| |||||||||| ||||||| ||||||||||||    
T  10453485 aattattctttaaaaatattaaaattttcaattttcaatgcattgattacacaaa 10453539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 304
Target Start/End: Complemental strand, 34398159 - 34398074
Alignment:
Q  218 attattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    ||||||||||||||| ||||||   |||||||| ||||||| |||  ||||||||||| || |||| ||| ||||||||||| ||||    
T  34398159 attattttttaaaaaggtcaaatacttcaattttcaatgcattgaaaacacaaatttttat-aaaatttatcatttaaagtctttaa 34398074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 307
Target Start/End: Complemental strand, 8327909 - 8327824
Alignment:
Q  222 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaacta 307  Q
    ||||||||||| |||||||  ||||||||||||| || | | |||||||| ||| ||||||  ||||||||| | || ||||||||    
T  8327909 ttttttaaaaaagtcaaagacttcaatttccaatacaataaatacacaaacttttataaaatcttaccattttatgtgcttaacta 8327824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 298
Target Start/End: Complemental strand, 17883398 - 17883317
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 298  Q
    |||||||||||||||| ||||||   || ||||||||| ||| ||||| || ||||||| | ||||| |||| |||||||||    
T  17883398 aattattttttaaaaaagtcaaaaactttaatttccaacgcattgatttcataaattttgacaaaaacttactatttaaagt 17883317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 40722382 - 40722459
Alignment:
Q  219 ttattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    ||||| ||||| || ||||||  ||||||||| ||||||| | ||||||||||||  |||||||| |||| |||||||    
T  40722382 ttattctttaagaaagtcaaatatttcaattttcaatgcattaattacacaaattaccataaaaacttactatttaaa 40722459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 25176401 - 25176329
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg 261  Q
    |||| ||||||| |||  |||||||  |||||||| ||| ||||||||||| |||||||||||  ||||||||    
T  25176401 ggcactctttaaacatgttaaattagataattattcttttaaaatgtcaaatttttcaatttctgatgcactg 25176329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 298
Target Start/End: Complemental strand, 26239652 - 26239544
Alignment:
Q  191 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagttacc 289  Q
    |||| |||||| |||||||||| || ||||||| ||| |||| || || ||||  | ||||||||||| ||| || |||| |||||| |||||| ||||     
T  26239652 cattttttaaggatactaaatttagcaattattctttcaaaaagttaacgtttatagtttccaatgcattgaatatacaatttttcattaaaaacttact 26239553  T
Q  290 atttaaagt 298  Q
    |||||||||    
T  26239552 atttaaagt 26239544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 35567135 - 35567215
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaa 296  Q
    |||||||||||||||| ||||||  ||| |||||||||| || | | |||||| ||||| || ||||||||| ||||||||    
T  35567135 aattattttttaaaaaagtcaaatattttaatttccaatacattaaatacacatatttttataaaaaagttatcatttaaa 35567215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 37352484 - 37352436
Alignment:
Q  229 aaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca 277  Q
    |||| ||||||  ||||||||||||||||| | ||||||||||||||||    
T  37352484 aaaaagtcaaatatttcaatttccaatgcattaattacacaaattttca 37352436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 12002260 - 12002385
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12002260 ggcactctttaagtatactaaattaagtaattattctttaaaaatgtaaaagttttcaatttccaatgcactgattacacaaatttttataaaaagttac 12002359  T
Q  289 catttaaagtccttaactagtgcccc 314  Q
     ||||||  |||||||| ||||||||    
T  12002360 tatttaagatccttaaccagtgcccc 12002385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 1876595 - 1876479
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  1876595 ggcactctttaagcatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcactgattacacaaactttcataaaaaattac 1876496  T
Q  289 catttaaagtccttaac 305  Q
    |||||||||||||||||    
T  1876495 catttaaagtccttaac 1876479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 14016980 - 14016855
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||||||| |||||| ||||||| ||| ||| ||||| | ||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||    
T  14016980 ggcactctttaagcatgctaaataaagtaatgattctttcaaaatttaaaagttttcaatttccaatgcactgatcacacaaacttttataaaaaattac 14016881  T
Q  289 catttaaagtccttaactagtgcccc 314  Q
     |||||| ||||||||||||||||||    
T  14016880 tatttaaggtccttaactagtgcccc 14016855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 11533230 - 11533345
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| |||  ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||| |||||||||    
T  11533230 tctttaaacatgttaaattaataaattattctttaaaaatgtcaaagttttcaatttccaatgcactgaaggcacaaactttcataaaaaattaccattt 11533329  T
Q  294 aaagtccttaactagt 309  Q
    || | |||||||||||    
T  11533330 aaggcccttaactagt 11533345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 198 - 296
Target Start/End: Complemental strand, 44220814 - 44220716
Alignment:
Q  198 taagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    |||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||  | |||||||| ||||||||||||    
T  44220814 taagcatgttaaattaagtaattattcttttaaaatgtcaaagttttcaatttccaatgcactcattacacaaacgtccataaaaatttaccatttaaa 44220716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 31844331 - 31844214
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagtta 287  Q
    |||| |||||||  || ||||||||||||||||||  ||||||| ||||||||||| |||||||||||||| | |||| ||||| |||||||||||||||    
T  31844331 ggcactctttaaatattctaaattaagtaattattccttaaaaaagtcaaagttttgaatttccaatgcacttcattatacaaactttcataaaaagtta 31844232  T
Q  288 ccatttaaagtccttaac 305  Q
    | ||||||||||||||||    
T  31844231 ctatttaaagtccttaac 31844214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 196 - 304
Target Start/End: Original strand, 32271170 - 32271278
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    |||||||||  ||||||||| ||||||||||||||||||| ||||||||||||||| ||| || |||||||||||| || ||||||||| ||||||||||    
T  32271170 tttaagcattttaaattaagaaattattttttaaaaatgttaaagttttcaatttctaattcattgattacacaaacttccataaaaagataccatttaa 32271269  T
Q  296 agtccttaa 304  Q
     ||| ||||    
T  32271270 tgtctttaa 32271278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 36907841 - 36907918
Alignment:
Q  237 aaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||||||||| |||||||||||||| ||||||||||    
T  36907841 aaagttttcaatttccaatgcaatgattacacaaacttttataaaaagttactatttaaagtccttagctagtgcccc 36907918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 194 - 314
Target Start/End: Complemental strand, 39594597 - 39594477
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||| || |||||||||| ||||||| |||| |||| |||||||||||||||| || | ||||||||| ||||| ||||||||||||||| |||||    
T  39594597 tctttaagaatgctaaattaagaaattattctttataaatatcaaagttttcaattttcattacactgattatacaaactttcataaaaagttatcattt 39594498  T
Q  294 aaagtccttaactagtgcccc 314  Q
    ||  |||||||| | ||||||    
T  39594497 aagatccttaaccaatgcccc 39594477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 40629062 - 40628964
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    |||||||||||||||||  |||||||||| |||||||| |||||||||| ||||||||||||||| ||| ||||||  |||| |||||| |||||||||    
T  40629062 taaattaagtaattattcattaaaaatgttaaagtttttaatttccaattcactgattacacaaacttttataaaagattactatttaaggtccttaac 40628964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 194 - 303
Target Start/End: Complemental strand, 38019526 - 38019418
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| |||||||||| ||||||| ||||||| | | |||||||||||| || ||||||| ||||||||| | |||||||||| ||||||||||    
T  38019526 tctttaagcatgctaaattaagaaattattctttaaaatttttaaagttttcaatctctaatgcac-gattacacatactttcataaaatgttaccattt 38019428  T
Q  294 aaagtcctta 303  Q
    || |||||||    
T  38019427 aatgtcctta 38019418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 44907218 - 44907318
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 294  Q
    ||||||| | ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||| || |||| || ||||||||||| |||| |||||    
T  44907218 tttaagctttctaaattaagtaattattttttaaaaatgtcaaactttttcaattttcaatgcactaataacactaactttcataaaaatttactattta 44907317  T
Q  295 a 295  Q
    |    
T  44907318 a 44907318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 7627955 - 7627844
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| |||  |||||||||||||||||||| |||||||| |||||||| |||||| ||| ||||||| ||||||| ||||||||||| ||||  |||    
T  7627955 tctttaaacatgttaaattaagtaattatttttaaaaaatgtgaaagtttttaatttctaatacactgatcacacaaactttcataaaaaattacttttt 7627856  T
Q  294 aaagtccttaac 305  Q
    | |||| |||||    
T  7627855 atagtcattaac 7627844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 38047718 - 38047607
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatt 292  Q
    ||||||||||| ||||||||||||||| || |||| ||||||||||  ||| |||||  ||||||||  |||||||||| ||||||| ||||||| ||||    
T  38047718 tctttaagcattctaaattaagtaatttttctttataaatgtcaaaaattttaatttttaatgcactttattacacaaactttcatataaagttatcatt 38047619  T
Q  293 taaagtccttaa 304  Q
    ||||||||||||    
T  38047618 taaagtccttaa 38047607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 2376836 - 2376726
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||||||  |||||||| |||||||| ||||||||| ||||||||||||||||| || | | | |||| | ||| |||||||||||||||| ||||    
T  2376836 tctttaagcattttaaattaaataattattctttaaaaatatcaaagttttcaatttctaacgtattaattatataaactttcataaaaagttactattt 2376737  T
Q  294 aaagtccttaa 304  Q
    || ||||||||    
T  2376736 aaggtccttaa 2376726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 20522943 - 20523031
Alignment:
Q  195 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    |||||||||| |||| ||||||||||||| ||| ||||| | |||||||||||||| ||||||||| |||||| ||| |||||||||||    
T  20522943 ctttaagcatgctaagttaagtaattattctttcaaaatttaaaagttttcaattttcaatgcactaattacataaactttcataaaaa 20523031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 37449531 - 37449626
Alignment:
Q  187 gtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 282  Q
    ||||||||| |||| |||  ||||||||||||||||||||| ||||||||||| |||||||||| |||| |||| ||||| | || ||||||||||    
T  37449531 gtggcattccttaaacattttaaattaagtaattatttttttaaaatgtcaaacttttcaattttcaatacactaattacgctaactttcataaaa 37449626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 1773915 - 1773799
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt--caatttccaatgcactgattacacaaattttcataaaaagtt 286  Q
    |||| ||||||||| | ||||||||||| |||||||||||||| ||||||| ||||  |||||||||||||||| ||| |||  | ||||||||||  ||    
T  1773915 ggcagtctttaagctttctaaattaagttattattttttaaaa-tgtcaaacttttttcaatttccaatgcactaattgcacttactttcataaaagttt 1773817  T
Q  287 accatttaaagtccttaa 304  Q
    || |||||||||||||||    
T  1773816 actatttaaagtccttaa 1773799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 314
Target Start/End: Complemental strand, 41960083 - 41959969
Alignment:
Q  201 gcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtc 299  Q
    |||| ||| ||| |||||||||| ||||||||||| |||||||| |  ||||||||||||  |||| ||||| ||||||||||| ||| |||||||||||    
T  41960083 gcattctacatttagtaattattctttaaaaatgttaaagttttaagcttccaatgcactttattatacaaactttcataaaaaattatcatttaaagtc 41959984  T
Q  300 cttaactagtgcccc 314  Q
    |||||| ||| ||||    
T  41959983 cttaaccagtacccc 41959969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 298
Target Start/End: Complemental strand, 1445242 - 1445137
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 292  Q
    ||||||||| | ||||||||||||||   | ||||| ||||||||||| |||||||| |||||||| | |||||||||| ||| | ||||||||||||||    
T  1445242 tctttaagctttctaaattaagtaatatctctttaataatgtcaaagtgttcaattttcaatgcactttattacacaaacttttagaaaaagttaccatt 1445143  T
Q  293 taaagt 298  Q
    ||||||    
T  1445142 taaagt 1445137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 31264985 - 31265094
Alignment:
Q  184 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    ||||||||| ||||||||||| |||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| ||||||||||||    
T  31264985 cctgtggcactctttaagcatgctaaattaggaagttattctttaaaaaagtcaaacaattcaatttccaatgtattaaatacacaagttttcataaaaa 31265084  T
Q  284 gttaccattt 293  Q
    ||||| ||||    
T  31265085 gttactattt 31265094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 282
Target Start/End: Complemental strand, 18842363 - 18842275
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 282  Q
    ||||||| |||  ||||||||||||||||| |||||||||||||||||||| |||||  |||| | |||||||||||| ||| ||||||    
T  18842363 tctttaaccattttaaattaagtaattattctttaaaaatgtcaaagtttttaatttttaatgtattgattacacaaacttttataaaa 18842275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 314
Target Start/End: Original strand, 30486620 - 30486728
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaagtccttaac 305  Q
    ||||| ||||||||||| ||| ||||| | |||||||| |||||  ||||||||||||||||||| ||| || ||||| |||| ||||||||||||||||    
T  30486620 taaataaagtaattattcttttaaaatttaaaagtttttaatttataatgcactgattacacaaacttttataaaaaaattactatttaaagtccttaac 30486719  T
Q  306 tagtgcccc 314  Q
     ||| ||||    
T  30486720 cagtacccc 30486728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 39691222 - 39691112
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| | | |||||  ||||||| |||||||| ||||||   |||||||| ||||||| ||| |||||||||||||||||||| |||| ||||    
T  39691222 tctttaagcattccacattaaaaaattattctttaaaaaagtcaaatagttcaattttcaatgcattgaatacacaaattttcataaaaaattactattt 39691123  T
Q  294 aaagtccttaa 304  Q
    ||  |||||||    
T  39691122 aagatccttaa 39691112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 313
Target Start/End: Original strand, 4278957 - 4279057
Alignment:
Q  212 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 311  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| |||  |||||||||| |||||  ||||  |||||| |||| |||||| |||||||    
T  4278957 taagtaattattttataaaaatgataaagttttcaatttccaatacac-cattacacaaactttcaccaaaaagtaccatctaaaatccttacctagtgc 4279055  T
Q  312 cc 313  Q
    ||    
T  4279056 cc 4279057  T

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Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 5020160 - 5020051
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||| || |||||  ||| ||| ||||| |||||| ||||||| ||||||||||| || || |||||||||  |||||||| | ||||||||||||    
T  5020160 tctttaaggattctaaaagaagaaataattttataaaaaagtcaaagatttcaatttccgatacattgattacac--attttcatgacaagttaccattt 5020063  T
Q  294 aaagtccttaac 305  Q
    |||| |||||||    
T  5020062 aaaggccttaac 5020051  T

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Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 283
Target Start/End: Original strand, 24869402 - 24869497
Alignment:
Q  184 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa-ttttcataaaa 282  Q
    ||||||||| ||||||| ||| |||||||||||||||||| | |||||||     | |||||||||||||||||||| |||||| ||| |||||||||||    
T  24869402 cctgtggcactctttaaacatgctaaattaagtaattattctctaaaaat-----atttttcaatttccaatgcactaattacataaacttttcataaaa 24869496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 35501176 - 35501064
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 292  Q
    ||||||| ||| ||| ||| |||||||| | ||| ||||| | |||||||| |||||||||||||| | |||||||||| ||| ||||||| |||  |||    
T  35501176 tctttaaacattctacatttagtaattaatctttgaaaatattaaagtttttaatttccaatgcactttattacacaaacttttataaaaatttaatatt 35501077  T
Q  293 taaagtccttaac 305  Q
    |||||||||||||    
T  35501076 taaagtccttaac 35501064  T

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Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 35592455 - 35592539
Alignment:
Q  212 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    |||| ||||||||  |||||| ||||||  ||||||||||||| ||| |||| | |||||||| |||||||||||||||||||||    
T  35592455 taagaaattatttcgtaaaaaagtcaaatatttcaatttccaaggcaatgatcagacaaatttccataaaaagttaccatttaaa 35592539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 311
Target Start/End: Original strand, 14453699 - 14453794
Alignment:
Q  214 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 311  Q
    ||||||||||   |||||||||||||||||| ||||| |||||||| | |||||||||||||||| ||||  ||| ||||||||||| |||||||||||    
T  14453699 agtaattattccataaaaatgtcaaagtttttaattttcaatgcactttattacacaaattttcacaaaa--tta-catttaaagtctttaactagtgc 14453794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 34722837 - 34722774
Alignment:
Q  243 ttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    |||||||| |||||||||  |||| ||||| |||||||||||||||||||||||||||||||||    
T  34722837 ttcaattttcaatgcactttattatacaaactttcataaaaagttaccatttaaagtccttaac 34722774  T

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Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 30158170 - 30158108
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatg 256  Q
    ||||||||||| ||||||||| |||||||| ||| ||||||| |||||||| |||||||||||    
T  30158170 tctttaagcattctaaattaaataattattctttgaaaatgtaaaagtttttaatttccaatg 30158108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 37564440 - 37564346
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||| ||| |||||||||| ||||||| |||||||| ||||||   |||||||||||||| | | | ||||||| ||||||||||| |||||    
T  37564440 tctttaaacatgctaaattaagaaattattctttaaaaaagtcaaatagttcaatttccaatgtattaaatacacaagttttcataaaaggttac 37564346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 9629925 - 9629833
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt-caatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||| | |||| |||||||||||||||| |||||||| ||| |||| |||||| ||||||| ||||||||  |||||||||||||| ||||    
T  9629925 tttaagctttctaatttaagtaattattttt-aaaaatgtaaaactttttcaattttcaatgcattgattacattaattttcataaaaatttac 9629833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 12782775 - 12782888
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||||||||| || | ||||||| |||||||| ||  ||  |||| |||||||||||| | |  ||||| ||||||||||| | |||||| ||    
T  12782775 tctttaagcatactaaaatatgcaattattctttaaaaaagttgaatatttcgatttccaatgcaattaacacacacattttcataaatatttaccactt 12782874  T
Q  294 aaagtccttaacta 307  Q
    | ||||||||||||    
T  12782875 atagtccttaacta 12782888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 304
Target Start/End: Complemental strand, 26014833 - 26014752
Alignment:
Q  223 tttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    |||| |||||||| ||  ||||||| |||||||||||||||||||||||  || |||||||||||| |||||  ||||||||    
T  26014833 ttttgaaaaatgttaatattttcaagttccaatgcactgattacacaaacatttataaaaagttactatttatggtccttaa 26014752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 42636479 - 42636363
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 287  Q
    |||| ||||||||||| | ||||| |||||||||| || ||||| |||||   || |||||| ||||||| | | ||||||| |||||| |||||| |||    
T  42636479 ggcactctttaagcatcccaaatttagtaattattattcaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 42636380  T
Q  288 ccatttaaagtccttaa 304  Q
    ||||||||||| |||||    
T  42636379 ccatttaaagtgcttaa 42636363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 9005010 - 9005043
Alignment:
Q  206 ctaaattaagtaattattttttaaaaatgtcaaa 239  Q
    ||||||||||||||||||||||||||||||||||    
T  9005010 ctaaattaagtaattattttttaaaaatgtcaaa 9005043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 27506079 - 27505979
Alignment:
Q  203 atactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtcctt 302  Q
    |||||||||||||  |||||||||| |||| || |||  ||||||||| ||||||||| ||||||||| ||||  |||||| |||| |||||| ||| ||    
T  27506079 atactaaattaagatattatttttttaaaa-gtgaaatatttcaattttcaatgcactaattacacaattttttgtaaaaatttacaatttaaggtcatt 27505981  T
Q  303 aa 304  Q
    ||    
T  27505980 aa 27505979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 281
Target Start/End: Complemental strand, 37813516 - 37813423
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 281  Q
    |||| |||||||| || | ||||| |||||||||| ||||||||| |||||   || |||||||||||||| ||| ||||||| ||||||||||    
T  37813516 ggcactctttaaggatcccaaatttagtaattattcttttaaaaaagtcaaccattacaatttccaatgcattgaatacacaacttttcataaa 37813423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 304
Target Start/End: Complemental strand, 43419827 - 43419730
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    |||| |||| |||||||||||||||| || |||  ||| |||||  ||| || | |||| ||||||||||||||||| ||| |||||||||| |||||    
T  43419827 taaaataagaaattattttttaaaaaagttaaatattttaatttgtaatacatttattatacaaattttcataaaaacttaacatttaaagtacttaa 43419730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 288
Target Start/End: Original strand, 43841043 - 43841124
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||||||||||||| ||||||||| | ||| ||||||||||  |||  | |||||||||||||||| | ||||| ||||    
T  43841043 taaattaagtaattattctttaaaaatattaaatttttcaatttttaatatattgattacacaaatttttacaaaaaattac 43841124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 24103159 - 24103087
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattac 266  Q
    ||||||||||| ||||| |||| ||||||||||| |||| ||||||  |||| |||||| ||||| |||||||    
T  24103159 tctttaagcattctaaaataagaaattatttttttaaaaggtcaaatgtttcgatttccgatgcaatgattac 24103087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 298
Target Start/End: Complemental strand, 34336581 - 34336477
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||| || || ||| ||| ||||||| |||||||| ||||||   |||||||||||||||| ||||| || ||| ||| | ||||| |||| ||||    
T  34336581 tctttaaggattcttaataaagaaattattctttaaaaaagtcaaaaacttcaatttccaatgcattgatttcataaactttgacaaaaacttactattt 34336482  T
Q  294 aaagt 298  Q
    |||||    
T  34336481 aaagt 34336477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 304
Target Start/End: Complemental strand, 41106092 - 41105996
Alignment:
Q  208 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    |||||||| ||||| |  ||||||| ||||||   |||||||| ||||||| ||| | ||||| ||||| |||||| ||||||||||| ||||||||    
T  41106092 aaattaagaaattaatcattaaaaaagtcaaatagttcaattttcaatgcattgaattcacaatttttcgtaaaaacttaccatttaaggtccttaa 41105996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 280
Target Start/End: Original strand, 42801078 - 42801162
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataa 280  Q
    |||||| || ||||| |||||||||||| |||| ||| | ||||  ||||||||| ||||||| | |||||||| ||||||||||    
T  42801078 tttaagtattctaaaataagtaattattctttacaaaaggcaaatatttcaattttcaatgcattaattacacacattttcataa 42801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 7931765 - 7931812
Alignment:
Q  246 aatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||| ||||| | |||||||||||||||||| |||||||||||||||    
T  7931765 aattttcaatgtattgattacacaaattttcaaaaaaagttaccattt 7931812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 45368808 - 45368729
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    ||||||||| |||||| || |||  ||||||||| | ||||| |||||| ||| |||||||| | |||||||||||||||    
T  45368808 aattattttataaaaaagttaaatatttcaattttcgatgcaatgattatacatattttcatgataagttaccatttaaa 45368729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 288
Target Start/End: Original strand, 33636716 - 33636810
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||||||| |||||   || ||||||||  |||||| ||||||  ||||||||||||||||| | |||||| ||  ||||| ||||||||||    
T  33636716 tctttaagcattctaaaaggagaaattatttcataaaaaagtcaaatgtttcaatttccaatgcaataattacaaaatatttcaaaaaaagttac 33636810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 311
Target Start/End: Complemental strand, 32133735 - 32133686
Alignment:
Q  262 attacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 311  Q
    |||||||||| ||||||||||| |||| ||||||| |||||||| |||||    
T  32133735 attacacaaactttcataaaaaattactatttaaattccttaaccagtgc 32133686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 282
Target Start/End: Original strand, 41385258 - 41385351
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 282  Q
    |||||||||||||||  | ||| |||| |||||||  |||| || |||| |  ||||||||| ||||| | |||||||||||||||||| ||||    
T  41385258 ggcattctttaagcaatccaaaataagaaattattccttaagaaagtcagatgtttcaattttcaatgtattgattacacaaattttcacaaaa 41385351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 42022701 - 42022640
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaat 255  Q
    |||||||||||  ||||||||  |||||||||||||||| ||||||   |||||||||||||    
T  42022701 tctttaagcattttaaattaaaaaattattttttaaaaaagtcaaatagttcaatttccaat 42022640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 44960519 - 44960580
Alignment:
Q  252 caatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 313  Q
    ||||||| |||||||| ||||||||||||||| |||| ||| ||||| |||||  |||||||    
T  44960519 caatgcattgattacataaattttcataaaaatttactattaaaagtgcttaaagagtgccc 44960580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 6270334 - 6270418
Alignment:
Q  212 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    |||| ||||||||  ||||| |||||||  ||||||||| ||||  | | |||||||||||||| |||||||  |||||||||||    
T  6270334 taagaaattatttcataaaactgtcaaatatttcaattttcaatatattaattacacaaatttttataaaaaaataccatttaaa 6270418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 313
Target Start/End: Original strand, 33013043 - 33013163
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa-aagttaccatt 292  Q
    ||||||||||||| ||||| |  ||||||| ||| |||| |||||   || |||||||||||| ||| | ||||||| |||||||||| || |||| | |    
T  33013043 tctttaagcataccaaatttaacaattattcttttaaaaagtcaactattacaatttccaatgtactcaatacacaacttttcataaagaacttactaat 33013142  T
Q  293 taaagtccttaactagtgccc 313  Q
    |||||| |||||  |||||||    
T  33013143 taaagtgcttaaagagtgccc 33013163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 304
Target Start/End: Complemental strand, 33285963 - 33285923
Alignment:
Q  264 tacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    ||||||| |||||||||||| |||| |||||||||||||||    
T  33285963 tacacaatttttcataaaaatttactatttaaagtccttaa 33285923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 281
Target Start/End: Complemental strand, 33949658 - 33949571
Alignment:
Q  194 tctttaagcatactaaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 281  Q
    |||||||||||| |||||| ||||| |||| |||||||||| ||||   || ||||||| |||||||| | ||||||| ||||||||||    
T  33949658 tctttaagcatattaaatttagtaagtattgttttaaaaat-tcaactattacaatttcaaatgcactcaatacacaacttttcataaa 33949571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 44254203 - 44254131
Alignment:
Q  226 ttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 298  Q
    ||||||| ||||||   |||||||||||||||| ||||| || ||||||| | ||||| |||| |||||||||    
T  44254203 ttaaaaaagtcaaaaacttcaatttccaatgcattgatttcataaattttgacaaaaacttactatttaaagt 44254131  T

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Target: chr4 (Bit Score: 84; Significance: 7e-40; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 194 - 313
Target Start/End: Original strand, 53261556 - 53261675
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| |||||||||||||||||| ||||||||| | |||||||||||||||||||||| |||||||||||| ||| |||||||||||| ||||    
T  53261556 tctttaagcatgctaaattaagtaattattctttaaaaatttaaaagttttcaatttccaatgcagtgattacacaaacttttataaaaagttactattt 53261655  T
Q  294 aaagtccttaactagtgccc 313  Q
    |||||||||||| |||||||    
T  53261656 aaagtccttaacgagtgccc 53261675  T

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Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 314
Target Start/End: Original strand, 40252654 - 40252773
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| |||| |||||||||||||| || ||||||||||| |||||||||||||| |||| || ||||||||| || ||||||||||| |||| ||||    
T  40252654 tctttaaacatattaaattaagtaattgttatttaaaaatgttaaagttttcaattttcaatacattgattacac-aactttcataaaaatttactattt 40252752  T
Q  294 aaagtccttaactagtgcccc 314  Q
    |||||||||||| ||||||||    
T  40252753 aaagtccttaaccagtgcccc 40252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 49951798 - 49951717
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaatttt 275  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||||    
T  49951798 tctttaagcatgctaaattaagtaattattcttttaaaatgtcaaagttttcaattttcaatgcaccgattacacaaatttt 49951717  T

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Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 194 - 313
Target Start/End: Original strand, 53622301 - 53622421
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatt 292  Q
    ||||||| |||  |||||||||||||| |||||| ||||||||||| |||||||||||||   ||||  |||||||||||||||| ||||||||| ||||    
T  53622301 tctttaaacatcttaaattaagtaattttttttttaaaatgtcaaaattttcaatttccagctcactttattacacaaattttcagaaaaagttatcatt 53622400  T
Q  293 taaagtccttaactagtgccc 313  Q
    |||||| ||||||||||||||    
T  53622401 taaagttcttaactagtgccc 53622421  T

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Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 36876167 - 36876064
Alignment:
Q  192 attctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccat 291  Q
    ||||||||||||| ||||||||||||| |||| ||| ||||||| || |||||||||||||||| || |||||||||||| ||| ||||||||||||||     
T  36876167 attctttaagcatgctaaattaagtaactattcttttaaaatgtaaatgttttcaatttccaatacattgattacacaaacttttataaaaagttaccac 36876068  T
Q  292 ttaa 295  Q
    ||||    
T  36876067 ttaa 36876064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 37461585 - 37461460
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcata-aaaagtta 287  Q
    |||| ||||||| ||| ||||||||||||||||  |||||||| ||||||||||||||||||  ||||||| ||||||||||| ||||||| |||| |||    
T  37461585 ggcactctttaaacatgctaaattaagtaattaaattttaaaa-tgtcaaagttttcaatttttaatgcaccgattacacaaactttcataaaaaaatta 37461487  T
Q  288 ccatttaaagtccttaactagtgcccc 314  Q
    ||||||| | |||||||||| ||||||    
T  37461486 ccatttataatccttaactaatgcccc 37461460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 295
Target Start/End: Original strand, 45743309 - 45743414
Alignment:
Q  190 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacc 289  Q
    ||||| |||||| ||  ||||||||| ||||||| |||||||||||||||||||||||||| |||| || ||||||||||| |||||||||| ||||||     
T  45743309 gcattttttaagtatgttaaattaagaaattattctttaaaaatgtcaaagttttcaattttcaatacagtgattacacaacttttcataaagagttact 45743408  T
Q  290 atttaa 295  Q
    ||||||    
T  45743409 atttaa 45743414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 295
Target Start/End: Complemental strand, 52650798 - 52650697
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| ||| |||||||||| ||||||| |||| |||||||||| |||||||||| |||| |||||||||||||| |||||||||||| |||| ||||    
T  52650798 tctttaaacatgctaaattaagaaattattctttacaaatgtcaaaattttcaattttcaattcactgattacacaatttttcataaaaaattactattt 52650699  T
Q  294 aa 295  Q
    ||    
T  52650698 aa 52650697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 305
Target Start/End: Complemental strand, 3179113 - 3179003
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 294  Q
    |||||| || |||||| ||||||||| |||||||||| || ||||||||||||||||||| ||| | |||||||||| |||||||||||||||| |||||    
T  3179113 tttaagtattctaaatcaagtaattaatttttaaaaaagttaaagttttcaatttccaatacactttattacacaaactttcataaaaagttactattta 3179014  T
Q  295 aagtccttaac 305  Q
     |||| |||||    
T  3179013 tagtctttaac 3179003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 194 - 295
Target Start/End: Original strand, 31262914 - 31263014
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||  |||| ||||| |||||||| ||| ||||||||||  |||||    
T  31262914 tctttaagcattctaaattaagtaattatttt-taaaaatgtcaaagttttcgattttgaatgtactgactacacaaacttttataaaaagttgtcattt 31263012  T
Q  294 aa 295  Q
    ||    
T  31263013 aa 31263014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 194 - 295
Target Start/End: Original strand, 47937861 - 47937962
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| |||||||||||| ||||||||| |||||||| ||||||||||||||||| | |||| ||| || |||||| ||||||||||| ||| |||||    
T  47937861 tctttaaacatactaaattatgtaattattctttaaaaaagtcaaagttttcaattttctatgctctgtttgcacaaactttcataaaaaattatcattt 47937960  T
Q  294 aa 295  Q
    ||    
T  47937961 aa 47937962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 49795138 - 49795254
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagtta 287  Q
    |||| |||||||||||||||||| |||||||||||||||  |||| | ||| |||||||||| |||||||| ||||||||||| ||| || ||||| |||    
T  49795138 ggcactctttaagcatactaaataaagtaattatttttt-taaatttaaaaattttcaattttcaatgcaccgattacacaaacttttataaaaaaatta 49795236  T
Q  288 ccatttaaagtccttaac 305  Q
    | ||||||||||||||||    
T  49795237 ctatttaaagtccttaac 49795254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 310
Target Start/End: Complemental strand, 38354577 - 38354473
Alignment:
Q  207 taaattaagtaattatttttt-aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||| || ||| ||||||  ||||||||||| ||| ||| |    
T  38354577 taaattaagtaattatttttttaaaaatgtcaaacttttcaatttctaatacactgattacactaactttaataaaagtttaccatttaaggtctttagc 38354478  T
Q  306 tagtg 310  Q
    |||||    
T  38354477 tagtg 38354473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 17970803 - 17970917
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagtta 287  Q
    |||| |||||||||||  |||||||||||||||||  || ||||| |||||| ||||||||||||||||||||||||||   || ||| || ||||||||    
T  17970803 ggcactctttaagcatgataaattaagtaattattcatttaaaatatcaaagtttttcaatttccaatgcactgattac---aactttaatgaaaagtta 17970899  T
Q  288 ccatttaaagtccttaac 305  Q
    |||||||||||| |||||    
T  17970900 ccatttaaagtctttaac 17970917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 23136612 - 23136539
Alignment:
Q  197 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaa 270  Q
    ||||| ||| ||||||||||||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||    
T  23136612 ttaagtatattaaattaagtaattattcttttaaaatttaaaagttttcaatttccaatgcactgattacacaa 23136539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 304
Target Start/End: Complemental strand, 41370262 - 41370166
Alignment:
Q  208 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    |||||||| |||||||| | ||||| || |||  ||||||||| ||||||| |||||||||||||||||||||||| |||| ||| |||||||||||    
T  41370262 aaattaagaaattatttctcaaaaaagttaaatatttcaattttcaatgcattgattacacaaattttcataaaaacttactattcaaagtccttaa 41370166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 306
Target Start/End: Original strand, 50617494 - 50617606
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| |||  ||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||| ||| || |||||| |||| | | |||||    
T  50617494 tctttaaacattataaattaagtaattatttttttaaaatgtcaaacttttcaatttttaatgcactgattgcactaactttcatcaaaattgatcattt 50617593  T
Q  294 aaagtccttaact 306  Q
    || || |||||||    
T  50617594 aaggttcttaact 50617606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 294
Target Start/End: Original strand, 4391968 - 4392067
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagt-tttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 294  Q
    |||||| || ||||||| |||||||||| |||||||||||||||   ||||||||| |||| ||||||||||||||||||| ||||||| ||| ||||||    
T  4391968 tttaagtattctaaatttagtaattattctttaaaaatgtcaaaaaatttcaattttcaatacactgattacacaaatttttataaaaatttatcattta 4392067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 313
Target Start/End: Original strand, 35153262 - 35153369
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    |||||||| | |||||| ||||||||||| |||||||||||||| |||||||| | ||| |||||| ||| |||||||||||| |||||||||| |||      
T  35153262 taaattaaatcattattctttaaaaatgttaaagttttcaattttcaatgcactttattgcacaaacttttataaaaagttactatttaaagtctttatt 35153361  T
Q  306 tagtgccc 313  Q
    ||||||||    
T  35153362 tagtgccc 35153369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 194 - 314
Target Start/End: Original strand, 32175431 - 32175550
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatt 292  Q
    |||||||||||  |||||||||||||||||   ||||| |||||  ||||||||||| ||||| |||  ||| |||||| ||||| ||||||||| ||||    
T  32175431 tctttaagcattttaaattaagtaattattccataaaagtgtca--gttttcaattttcaatgtactttattgcacaaactttcacaaaaagttatcatt 32175528  T
Q  293 taaagtccttaactagtgcccc 314  Q
    ||||||| ||||||||||||||    
T  32175529 taaagtctttaactagtgcccc 32175550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 320
Target Start/End: Complemental strand, 18939967 - 18939850
Alignment:
Q  203 atactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtcctt 302  Q
    ||||||||||||||||||||| ||||||||  | ||| ||||||||||  |||| | |  || |||||| ||| ||||||||||| | ||||| ||||||    
T  18939967 atactaaattaagtaattattctttaaaaaaattaaaattttcaatttttaatgtatttgttgcacaaacttttataaaaagttatcttttaaggtcctt 18939868  T
Q  303 aactagtgccccatttcc 320  Q
    |||||||||| |||||||    
T  18939867 aactagtgccgcatttcc 18939850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 25042837 - 25042743
Alignment:
Q  195 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||||| ||||||||||||    || ||||||||||| ||| ||||||||||| |||| |||||||||||||| ||| ||||||||||| |||||    
T  25042837 ctttaagcatgctaaattaagta----ttctttaaaaatgttaaaattttcaatttctaatgtactgattacacaaacttttataaaaagttaacattt 25042743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 21687699 - 21687591
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagtta 287  Q
    |||| ||||||||| | |||| |||||||||  || ||||| ||| ||||||| |||||||| |||||||||  |||||||||| ||| |||||||||||    
T  21687699 ggcactctttaagctttctaagttaagtaatatttctttaataatatcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagtta 21687600  T
Q  288 ccatttaaa 296  Q
    |||||||||    
T  21687599 ccatttaaa 21687591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 22889253 - 22889377
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||| | | ||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||   |||| | || ||||||||||  |||     
T  22889253 ggcactctttaaactttctaaattaagtaattgttttttaaaaatgttaaatttttcaattttcaatgcaccagttactctaactttcataaaagtttat 22889352  T
Q  289 catttaaagtccttaactagtgccc 313  Q
    ||||||| ||| ||||| |||||||    
T  22889353 catttaaggtcattaacgagtgccc 22889377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 22940917 - 22941041
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||| | | ||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||   |||| | || ||||||||||  |||     
T  22940917 ggcactctttaaactttctaaattaagtaattgttttttaaaaatgttaaatttttcaattttcaatgcaccagttactctaactttcataaaagtttat 22941016  T
Q  289 catttaaagtccttaactagtgccc 313  Q
    ||||||| ||| ||||| |||||||    
T  22941017 catttaaggtcattaacgagtgccc 22941041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 20022234 - 20022309
Alignment:
Q  240 gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccca 315  Q
    ||||||||||||||||||| |||||  ||||| ||||||||||| |||| |||||| ||||||||| |||||||||    
T  20022234 gttttcaatttccaatgcattgattgtacaaactttcataaaaaattactatttaaggtccttaaccagtgcccca 20022309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 288
Target Start/End: Original strand, 2063473 - 2063567
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||||||| |||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | |||||||||||||||||||||||||    
T  2063473 tctttaagcatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaaatacacaaattttcataaaaagttac 2063567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 49446667 - 49446581
Alignment:
Q  228 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    ||||| ||||||  |||| |||||| ||||| |||||||||| |||||||| | ||||||| |||||||| ||||||||||||||||    
T  49446667 aaaaaagtcaaatatttcgatttccgatgcattgattacacatattttcatgataagttactatttaaaggccttaactagtgcccc 49446581  T

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Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 8297864 - 8297980
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 287  Q
    |||| ||||||||||| | ||||| |||||||||| ||| ||||||||||   || |||||||||||||| | | ||||||| |||||| |||||| |||    
T  8297864 ggcactctttaagcatcccaaatttagtaattattcttttaaaatgtcaactgttacaatttccaatgcattcaatacacaatttttcattaaaaactta 8297963  T
Q  288 ccatttaaagtccttaa 304  Q
    | ||||||||| |||||    
T  8297964 ctatttaaagtgcttaa 8297980  T

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Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 21241120 - 21241191
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcact 260  Q
    |||| ||||||| |||  ||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||    
T  21241120 ggcactctttaaacatgttaaattaagaaatgattttttaaaaatatcaaaattttcaatttccaatgcact 21241191  T

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Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 39767212 - 39767323
Alignment:
Q  201 gcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaagtc 299  Q
    |||| |||||| ||||||||||||||| |||||   |||||||| ||||||||||||| | |||||||||| ||| || ||||| |||| |||| | |||    
T  39767212 gcatgctaaataaagtaattattttttcaaaattaaaaagtttttaatttccaatgcattaattacacaaacttttataaaaaaattactatttgaggtc 39767311  T
Q  300 cttaactagtgc 311  Q
    |||||| |||||    
T  39767312 cttaaccagtgc 39767323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 44570185 - 44570122
Alignment:
Q  221 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaag 284  Q
    ||||||||||||||| ||| |||| ||||| ||||||| |||||||||||| ||||||||||||    
T  44570185 attttttaaaaatgttaaattttttaattttcaatgcattgattacacaaactttcataaaaag 44570122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 49623052 - 49622961
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagtt 286  Q
    |||||||||  |||||||||||||||||   ||||||||||||| ||||||||||| |||  || | |||||||||||||||| ||||||||    
T  49623052 tttaagcattttaaattaagtaattattccataaaaatgtcaaaattttcaatttctaatatactttattacacaaattttcacaaaaagtt 49622961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 304
Target Start/End: Original strand, 7996722 - 7996816
Alignment:
Q  206 ctaaattaagtaattatttttta-aaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    ||||||||| ||||||||||||  ||||| | |||||||| |||||||||||     |||||||||| ||||||||||| |||  |||||||||||||||    
T  7996722 ctaaattaaataattattttttttaaaattttaaagtttttaatttccaatg-----attacacaaactttcataaaaaattattatttaaagtccttaa 7996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 287
Target Start/End: Complemental strand, 19597256 - 19597165
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 287  Q
    ||||||||| ||| |||| | ||||||| |||||||||||||||   ||||||||| |||||| ||| |||| ||||||| |||||| ||||    
T  19597256 tttaagcattctacattaggaaattattctttaaaaatgtcaaatagttcaatttctaatgcattgaatacataaatttttataaaatgtta 19597165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 299
Target Start/End: Complemental strand, 36721660 - 36721589
Alignment:
Q  228 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtc 299  Q
    ||||| ||||||  ||||||||  ||||||| ||||||||||||||| |||||||| |||| ||||||||||    
T  36721660 aaaaaagtcaaatatttcaattctcaatgcattgattacacaaatttccataaaaacttactatttaaagtc 36721589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 49421969 - 49421882
Alignment:
Q  228 aaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    |||||||| ||||||||||||||||||||||| | |||  ||||  ||| |||||  |||  ||||||||||||||||||||||||||    
T  49421969 aaaaatgttaaagttttcaatttccaatgcactttattgtacaagcttttataaatcgttgtcatttaaagtccttaactagtgcccc 49421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 12618802 - 12618713
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    ||||||||||| | ||||| || ||||||||||| |||| |||||| ||| | |||||| |||||| |||||| |||||||||||||||||    
T  12618802 tctttaagcattccaaatttagaaattatttttttaaaaagtcaaatgttataaatttc-aatgcattgattatacaaattttcataaaaa 12618713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 313
Target Start/End: Complemental strand, 39724175 - 39724055
Alignment:
Q  196 tttaagcatactaaattaagtaattatttt--ttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 292  Q
    |||||| || ||||||||||||| ||| ||  ||| ||||||||||||||||||||| ||||  || | |||| ||||| ||| ||||||  ||||||||    
T  39724175 tttaagtattctaaattaagtaaatatattagttagaaatgtcaaagttttcaatttacaatatactttattatacaaacttttataaaatattaccatt 39724076  T
Q  293 taaagtccttaactagtgccc 313  Q
    |||||| |||||  |||||||    
T  39724075 taaagttcttaataagtgccc 39724055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 309
Target Start/End: Original strand, 20390018 - 20390138
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||||||||| || | |||  ||| ||| ||||| |||||| ||||||  |||  |||| | ||||| |||| |||||| ||||||| | |||||||    
T  20390018 ggcattctttaagaattccaaaacaagaaataattttataaaaaagtcaaatattttgattttcgatgcattgatcacacaacttttcatgataagttac 20390117  T
Q  289 catttaaagtccttaactagt 309  Q
    ||||||||  |||||||||||    
T  20390118 catttaaaagccttaactagt 20390138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 293
Target Start/End: Complemental strand, 23016335 - 23016231
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||| ||||| | |||||||| ||||||| |||||| | ||||||  ||||||||||||||||| ||| |||| | | ||| ||||||| |||     
T  23016335 ggcactctttgagcattccaaattaagaaattattatttaaagaagtcaaacatttcaatttccaatgcattgaatacatagacttttataaaaacttaa 23016236  T
Q  289 cattt 293  Q
    |||||    
T  23016235 cattt 23016231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 309
Target Start/End: Original strand, 23614626 - 23614729
Alignment:
Q  206 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    ||||||||| ||||||||||||||||| || |||| ||||||||| |||| ||| | |||||| ||| ||| ||||||  ||| | ||||||||| ||||    
T  23614626 ctaaattaaataattattttttaaaaacgttaaag-tttcaattttcaatacactttattacataaacttttataaaatattatcgtttaaagtctttaa 23614724  T
Q  305 ctagt 309  Q
    |||||    
T  23614725 ctagt 23614729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 298
Target Start/End: Complemental strand, 25115371 - 25115267
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||| || | ||||| |||||||||| ||| |||| || ||   || |||||||||||||| ||| ||||||| |||| ||||||| |||| ||||    
T  25115371 tctttaagaatccaaaatttagtaattattattttaaaaagttaactattacaatttccaatgcagtgaatacacaactttttataaaaacttactattt 25115272  T
Q  294 aaagt 298  Q
    |||||    
T  25115271 aaagt 25115267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 281
Target Start/End: Complemental strand, 44690376 - 44690284
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 281  Q
    |||| ||||||| ||||||||| ||||||||||| ||||||||| || |||  |||| |||| ||||| | | |||||| | |||||||||||    
T  44690376 ggcactctttaaacatactaaaataagtaattatcttttaaaaaagttaaatatttcgattttcaatgtaataattacatatattttcataaa 44690284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 283
Target Start/End: Complemental strand, 14949069 - 14949006
Alignment:
Q  220 tattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    |||| |||||||| ||||||  || ||| || ||||||| ||||||||||||||||||||||||    
T  14949069 tattctttaaaaaagtcaaatgttacaaatttcaatgcattgattacacaaattttcataaaaa 14949006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 24369405 - 24369476
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgatta 265  Q
    ||||||| ||||||||| |||  ||||||| |||| ||| ||||||  ||||||||||||| ||||||||||    
T  24369405 tctttaaacatactaaaataaacaattattctttataaaagtcaaacatttcaatttccaaagcactgatta 24369476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 37179689 - 37179760
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgatta 265  Q
    ||||||||||||| |||  |||||||||||||||| ||| ||||||  |||| |||||||||| | ||||||    
T  37179689 tctttaagcataccaaaacaagtaattattttttagaaaagtcaaacatttcgatttccaatgtattgatta 37179760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 41468142 - 41468201
Alignment:
Q  254 atgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 313  Q
    ||||| ||||||||   ||||| || |||||||||||||||||| |||||||||||||||    
T  41468142 atgcattgattacatgtatttttatgaaaagttaccatttaaaggccttaactagtgccc 41468201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 48097952 - 48098051
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    |||||| || |||||||||| ||||||| |||||||| || |||   ||||||||||||| || | | ||||||  |||| |||||||||||| ||||||    
T  48097952 tttaagtattctaaattaagaaattattctttaaaaaagttaaatagttcaatttccaatacattaaatacacatgtttttataaaaagttactatttaa 48098051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 1696248 - 1696194
Alignment:
Q  242 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 296  Q
    ||||||||||| ||||| |||||||| | ||||||| |||||||||| |||||||    
T  1696248 tttcaatttccgatgcattgattacatacattttcaaaaaaagttactatttaaa 1696194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 24546816 - 24546722
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||||||||||  ||||||| | ||||||| ||||||||  ||||    |||||||||||||| | | | |||||||||||||||||||| ||||    
T  24546816 tctttaagcatgttaaattaggaaattattctttaaaaaattcaagcagttcaatttccaatgtattaaatacacaaattttcataaaaaattac 24546722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 38949118 - 38949048
Alignment:
Q  243 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 313  Q
    |||||||||| ||||| ||| | ||||| |||||||||||| |||| |||| ||||||||||  |||||||    
T  38949118 ttcaatttccgatgcattgaatgcacaatttttcataaaaatttactatttcaagtccttaaagagtgccc 38949048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 40173586 - 40173524
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatg 256  Q
    ||||||| ||| |||||||||||||| |||  |||||||||| |||||||| ||||| |||||    
T  40173586 tctttaaacattctaaattaagtaatcattcattaaaaatgttaaagtttttaattttcaatg 40173524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 41956490 - 41956428
Alignment:
Q  242 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    ||||||||| ||| ||| ||||||||||| |||||||||||| |||| ||| |||| ||||||    
T  41956490 tttcaattttcaacgcattgattacacaatttttcataaaaatttactattaaaagcccttaa 41956428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 50115068 - 50115145
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 297  Q
    ||||||||| |||||| ||||||| |||| |||||| ||||| |||||||||| ||| | ||||   ||||||||||||||    
T  50115068 aattattttataaaaaagtcaaagatttcgatttcctatgcattgattacacatattatgataa---gttaccatttaaag 50115145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 41394078 - 41394013
Alignment:
Q  207 taaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 271  Q
    ||||||||||||||||| ||| ||||| || ||||||||||||||| |||||  | ||||||||||    
T  41394078 taaattaagtaattattatttaaaaaaagttaaagttttcaatttctaatgcgttaattacacaaa 41394013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 51105943 - 51106020
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 294  Q
    ||||||| |||||||| ||||||  ||| ||||| |||| ||| |||||| || ||||||||||| |||||| |||||    
T  51105943 aattattatttaaaaaagtcaaatattttaattttcaatacacggattacgcatattttcataaatagttactattta 51106020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 298
Target Start/End: Original strand, 51834912 - 51835017
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagttaccatt 292  Q
    ||||||||||| ||||||| || ||||||| ||| |||| |||||   ||  ||||||||||||| | | ||||||| |||||| |||||| |||| |||    
T  51834912 tctttaagcatcctaaatttagcaattattcttttaaaaagtcaactattataatttccaatgcattaaatacacaacttttcattaaaaatttactatt 51835011  T
Q  293 taaagt 298  Q
    ||||||    
T  51835012 taaagt 51835017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 2818357 - 2818421
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca 258  Q
    |||||||||||  ||||||||| ||||||| ||| |||| ||||||   ||||||||||||||||    
T  2818357 tctttaagcattttaaattaagaaattattcttttaaaaggtcaaaaagttcaatttccaatgca 2818421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 7628005 - 7628077
Alignment:
Q  242 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    |||||||||||||| || || ||||| || |||||| ||||||||||| |||||||  |||||  ||||||||    
T  7628005 tttcaatttccaatacattggttacataacttttcaaaaaaagttaccttttaaaggtcttaaagagtgcccc 7628077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 21240662 - 21240706
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaat 233  Q
    |||||||||||| ||| |||||||||| ||||||| |||||||||    
T  21240662 ggcattctttaaacatgctaaattaagaaattattatttaaaaat 21240706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 24753978 - 24754030
Alignment:
Q  246 aatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 298  Q
    ||||||||||||| ||||| || ||| ||||||||||| |||| |||||||||    
T  24753978 aatttccaatgcattgatttcataaactttcataaaaatttactatttaaagt 24754030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 282
Target Start/End: Original strand, 27748438 - 27748526
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 282  Q
    ||||||| ||| ||||| |||||||||||||||||||| | |  || |||||||||| ||||  |  |||||||| || ||||||||||    
T  27748438 tctttaaacattctaaactaagtaattattttttaaaagtatttaacttttcaattttcaatatatcgattacactaactttcataaaa 27748526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 32055454 - 32055338
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagtta 287  Q
    |||| ||||||||||||| |||  ||| ||||||| |||| ||| ||||||  ||||| |||||||||||| ||||||||   ||||| ||||| | ||     
T  32055454 ggcactctttaagcatacaaaaacaagcaattattctttagaaaagtcaaacattttcgatttccaatgcattgattacatgtatttttataaatacttg 32055355  T
Q  288 ccatttaaagtccttaa 304  Q
    | ||||| |||||||||    
T  32055354 ctatttatagtccttaa 32055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 42901983 - 42902027
Alignment:
Q  244 tcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||||||| |||  |||||||||| |||||||||||||||||    
T  42901983 tcaatttccaaagcatagattacacaacttttcataaaaagttac 42902027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 281
Target Start/End: Complemental strand, 42957080 - 42956992
Alignment:
Q  194 tctttaagcatactaaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 281  Q
    ||||||| ||| ||||| |||| | ||||| |||||||||  |||||  ||||||||||||||||| | |||||||| ||||| |||||    
T  42957080 tctttaaacattctaaaataagcagttattattttaaaaaaatcaaatatttcaatttccaatgcattaattacacacatttttataaa 42956992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 44647941 - 44647869
Alignment:
Q  242 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    ||||||||||| ||||| | |||||||| |||||||| | ||||||| ||| |||| ||||||  ||||||||    
T  44647941 tttcaatttccgatgcattaattacacatattttcatgataagttactattcaaaggccttaatcagtgcccc 44647869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 29716871 - 29716752
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 294  Q
    ||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||||    
T  29716871 tttaagcattctaaattcagcaattatttttttaaaatgtcaaagttttcaatttccaatgcactttattacacaaactttcataaaaggttaccattta 29716772  T
Q  295 aagtccttaactagtgcccc 314  Q
    ||||||||||| ||||||||    
T  29716771 aagtccttaaccagtgcccc 29716752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 10364754 - 10364854
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 306  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| || || ||||||||||| |||| |||||| ||||||||||    
T  10364754 taaattaagtaattattctttaaaaatatcaaagttttcaatttacaatgcactgattatacgaactttcataaaaatttactatttaaggtccttaact 10364853  T
Q  307 a 307  Q
    |    
T  10364854 a 10364854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 194 - 314
Target Start/End: Original strand, 23344569 - 23344690
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 292  Q
    ||||||||| | ||||||||||||||  || |||| |||||||||||| ||||||||||||||||| | |||||||||| ||| ||||||||||||||||    
T  23344569 tctttaagctttctaaattaagtaatatttctttacaaatgtcaaagtgttcaatttccaatgcactttattacacaaacttttataaaaagttaccatt 23344668  T
Q  293 taaagtccttaactagtgcccc 314  Q
    |||||| | |||| ||||||||    
T  23344669 taaagtgcataaccagtgcccc 23344690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 13445839 - 13445745
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||||||| ||||||||||||| |||| ||||||||||| ||||||||||||||| || ||||| || ||||||| ||||||||||| ||||    
T  13445839 tctttaagcatgctaaattaagtaagtattctttaaaaatgtgaaagttttcaatttcaaaagcactaatcacacaaactttcataaaaaattac 13445745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 311
Target Start/End: Complemental strand, 5704665 - 5704549
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatt 292  Q
    ||||||| ||| |||||||||||||||||||||| |||||||   |||||||||||| ||||| | |||||||| ||| |||||| ||||| |||  |||    
T  5704665 tctttaaacatgctaaattaagtaattatttttttaaaatgt--tagttttcaattttcaatgtattgattacataaactttcataaaaaaattattatt 5704568  T
Q  293 taaagtccttaactagtgc 311  Q
    ||||||| ||||| |||||    
T  5704567 taaagtctttaacaagtgc 5704549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 315
Target Start/End: Original strand, 21130707 - 21130816
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttc-aatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    |||||| ||| |||||||||| ||||||||||| ||||  ||||| |||| |||| ||| ||| || ||||||||||  |||| |||||| |||||||||    
T  21130707 taaatttagttattatttttttaaaatgtcaaacttttttaattttcaatacactaattgcaccaactttcataaaagtttactatttaaggtccttaac 21130806  T
Q  306 tagtgcccca 315  Q
    ||||||||||    
T  21130807 tagtgcccca 21130816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 27752644 - 27752759
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaa-tttccaatgcac-tgattacacaaatttt---cataaaaagttac 288  Q
    ||||||| ||| |||||||||||||||||||| || |||||||||||||||||| |||| ||||||| | |||||||||| |||    | |||||||||     
T  27752644 tctttaaacattctaaattaagtaattattttatacaaatgtcaaagttttcaattttctaatgcactttattacacaaactttaaaaaaaaaaagttat 27752743  T
Q  289 catttaaagtccttaa 304  Q
     |||||||||||||||    
T  27752744 tatttaaagtccttaa 27752759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 34552407 - 34552311
Alignment:
Q  218 attattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcat-aaaaagttaccatttaaagtccttaactagtgccc 313  Q
    |||||| ||||||||| | ||||||||||||||||||||||| | ||||||| || |||||| ||||||||  ||||||||||||||||| |||||||    
T  34552407 attattctttaaaaatattaaagttttcaatttccaatgcactttattacac-aactttcataaaaaagttgtcatttaaagtccttaacgagtgccc 34552311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 295
Target Start/End: Complemental strand, 6586535 - 6586424
Alignment:
Q  184 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    |||| |||| |||||||||||||||||||| | ||||| | ||| |||| |||| |   |||||||||| ||||| |||  ||| |||||||||||||||    
T  6586535 cctggggcactctttaagcatactaaattaggaaattaatctttgaaaaagtcagatagttcaatttccgatgcattgaaaacataaattttcataaaaa 6586436  T
Q  284 gttaccatttaa 295  Q
    ||||| ||||||    
T  6586435 gttactatttaa 6586424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 314
Target Start/End: Original strand, 10429739 - 10429845
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 306  Q
    ||||| ||||||||||||||||||| |||  || |||||||||| || |||| |||||||| ||| ||||||||||| |||| || |||   ||||||||    
T  10429739 taaatcaagtaattattttttaaaa-tgtttaacttttcaattttcagtgcaatgattacataaactttcataaaaatttactatctaatagccttaact 10429837  T
Q  307 agtgcccc 314  Q
    ||||||||    
T  10429838 agtgcccc 10429845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 314
Target Start/End: Complemental strand, 34552265 - 34552165
Alignment:
Q  214 agtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 312  Q
    |||||||||| ||||||||| | |||||||||||||| |||||||  | ||||||  || |||||| |||| ||| ||||||||||||||||| ||||||    
T  34552265 agtaattattctttaaaaatattaaagttttcaattttcaatgcattttattaca-taactttcattaaaaattatcatttaaagtccttaaccagtgcc 34552167  T
Q  313 cc 314  Q
    ||    
T  34552166 cc 34552165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 311
Target Start/End: Complemental strand, 34552610 - 34552494
Alignment:
Q  195 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||  || ||| |||||||||| ||||||||| | |||||||| ||||| ||||| |||  | ||||||| ||| ||||||||||| ||||||    
T  34552610 ctttaagcattttacatttagtaattattctttaaaaatattaaagtttttaattttcaatgtactttaatacacaacttt-cataaaaagttgccattt 34552512  T
Q  294 aaagtccttaactagtgc 311  Q
    ||||| |||||| |||||    
T  34552511 aaagttcttaacaagtgc 34552494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 3753213 - 3753103
Alignment:
Q  184 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaa 282  Q
    |||||| || |||||||||||  ||||| ||||||||||| ||| ||||| | |||||||||||||| |||| | | || ||||||||| ||| ||||||    
T  3753213 cctgtgccactctttaagcatgataaataaagtaattattctttcaaaatttaaaagttttcaattttcaattcaaatggttacacaaacttttataaaa 3753114  T
Q  283 agttaccattt 293  Q
     ||||| ||||    
T  3753113 tgttactattt 3753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 3769436 - 3769326
Alignment:
Q  184 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaa 282  Q
    |||||| || |||||||||||  ||| | ||||||||||| ||| ||||| | |||||||||||||| |||| | | |||||||||||| ||| ||||||    
T  3769436 cctgtgccactctttaagcatgataattaaagtaattattctttcaaaatttaaaagttttcaattttcaattcaaatgattacacaaacttttataaaa 3769337  T
Q  283 agttaccattt 293  Q
     ||||| ||||    
T  3769336 tgttactattt 3769326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 1479149 - 1479081
Alignment:
Q  245 caatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 313  Q
    |||||| ||||||| ||| ||||||| ||| |||||||| |||||||||||||| |||||  |||||||    
T  1479149 caattttcaatgcattgaatacacaattttacataaaaatttaccatttaaagtgcttaaagagtgccc 1479081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 26187557 - 26187510
Alignment:
Q  191 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaa 238  Q
    |||| ||||||||| |||||||||||||||| ||||||||||| ||||    
T  26187557 cattttttaagcattctaaattaagtaattaatttttaaaaatttcaa 26187510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 27778752 - 27778862
Alignment:
Q  194 tctttaagcatactaaattaagtaattatttttta-aaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 292  Q
    |||||||| || ||||||| ||||||||||||||  |||| ||||| | ||  ||||| ||||||| | | ||||||  |||||||||||| ||||||||    
T  27778752 tctttaagaatcctaaatttagtaattattttttttaaaaagtcaacgattataattttcaatgcattcaatacacat-ttttcataaaaatttaccatt 27778850  T
Q  293 taaagtccttaa 304  Q
    |||||| |||||    
T  27778851 taaagtgcttaa 27778862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 6546804 - 6546738
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    ||||||||| || ||| || ||| ||||||||||| |||||| ||||| |||| |||||||||||||    
T  6546804 aattattttatacaaaagttaaatttttcaatttctaatgcattgattgcacatattttcataaaaa 6546738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 297
Target Start/End: Original strand, 7465508 - 7465578
Alignment:
Q  227 taaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 297  Q
    |||||| ||||||  ||||||||||| ||||| |||||||| ||||||||| ||| ||||| ||| |||||    
T  7465508 taaaaaagtcaaatatttcaatttccgatgcattgattacataaattttcaaaaagagttatcatataaag 7465578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 26187494 - 26187452
Alignment:
Q  262 attacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||    
T  26187494 attacacaaactttcataaaaaattaacatttaaagtccttaa 26187452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 30509314 - 30509424
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||||| ||| |||| ||||||| ||||||||  |||||  |||| |||| ||||||| ||||||||   ||||| ||||| | || | ||||    
T  30509314 tctttaagcataccaaaataagcaattattctttaaaaaaatcaaacatttcgattttcaatgcattgattacatgtatttttataaatacttgctattt 30509413  T
Q  294 aaagtccttaa 304  Q
    | |||||||||    
T  30509414 atagtccttaa 30509424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 295
Target Start/End: Complemental strand, 31702825 - 31702747
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    ||||||||| |||||| || ||   ||| |||||| |||||| |||||||||| ||||| |||||||||||| ||||||    
T  31702825 aattattttataaaaaagttaagtattttaatttctaatgcattgattacacatatttttataaaaagttactatttaa 31702747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 305
Target Start/End: Complemental strand, 354685 - 354576
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    ||||||||| |||||||| | || |||| ||| ||||  | |||||||  || ||| ||||||||||||||| | | ||| |||||||||||| ||||||    
T  354685 tttaagcattctaaattatgaaagtattcttttaaaacttaaaagtttctaacttctaatgcactgattacaaagacttttataaaaagttactatttaa 354586  T
Q  296 agtccttaac 305  Q
     | |||||||    
T  354585 ggcccttaac 354576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 310
Target Start/End: Complemental strand, 22695542 - 22695473
Alignment:
Q  242 tttcaatttccaatgcactgattacacaaattttca-taaaaagttaccatttaaagtccttaactagtg 310  Q
    ||||||||| | ||||| |||||||||| ||||| | |||||||||||||||||||  ||||||| ||||    
T  22695542 tttcaattttcgatgcattgattacacatatttttaataaaaagttaccatttaaaagccttaacgagtg 22695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 298
Target Start/End: Complemental strand, 2692538 - 2692434
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||| || | ||||| |||||||||| ||| |||| |||||   || |||||||||||| | ||| ||||||| |||| || |||| |||| ||||    
T  2692538 tctttaagaatccaaaatttagtaattattattttaaaaagtcaactattacaatttccaatgaagtgaatacacaactttttattaaaatttactattt 2692439  T
Q  294 aaagt 298  Q
    |||||    
T  2692438 aaagt 2692434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 289
Target Start/End: Original strand, 12132520 - 12132620
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| |||| |||||| ||| |||| | || |||| |||||||| ||||||   |||||||| ||||||| | | |||||||||||||||| ||| ||||    
T  12132520 ggcactcttgaagcattctatattatgaaaatattctttaaaaacgtcaaataattcaattttcaatgcatttaatacacaaattttcatagaaacttac 12132619  T
Q  289 c 289  Q
    |    
T  12132620 c 12132620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 194 - 313
Target Start/End: Original strand, 48551038 - 48551157
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||| |||||||||||| ||||    
T  48551038 tctttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaattttcaatgcaccgattacacaattttttataaaaagttactattt 48551137  T
Q  294 aaagtccttaactagtgccc 313  Q
     | |||||||||||||||||    
T  48551138 gaggtccttaactagtgccc 48551157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 206 - 304
Target Start/End: Original strand, 14146110 - 14146208
Alignment:
Q  206 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||| ||  ||||||| ||||||||||||||||||||    
T  14146110 ctaaattaagtaattattttttttaaatgtcaaagttttcaatttctaatgcactgattacacaaacttctataaaaatttaccatttaaagtccttaa 14146208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 3027093 - 3026979
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 292  Q
    ||||||||||| ||||||||||||||| || ||||||||| |||||| ||||| |||||||||||| | | |||||||| |||||||||||||||| |||    
T  3027093 tctttaagcattctaaattaagtaatttttatttaaaaatatcaaaggtttcattttccaatgcacttcactacacaaactttcataaaaagttactatt 3026994  T
Q  293 taaagtccttaacta 307  Q
    |||||||||||||||    
T  3026993 taaagtccttaacta 3026979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 305
Target Start/End: Original strand, 12140133 - 12140255
Alignment:
Q  184 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa-ttttcataaaa 282  Q
    ||||||| ||| ||||||||| ||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||    
T  12140133 cctgtggtattatttaagcatgctaaattaaataattattcttttaaaatgtcaaagttttcaatttccaatgtactgattatacaaactttttataaaa 12140232  T
Q  283 agttaccatttaaagtccttaac 305  Q
    |||||| |||||| ||| |||||    
T  12140233 agttactatttaaggtctttaac 12140255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 45757927 - 45758037
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||||||  ||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||  ||  ||||    
T  45757927 tctttaagcatgttaaattaagcaattattctttaaaaatgtcaaagttttcaatttacaatgcactgattacacaaactttcataaaaaaatattattt 45758026  T
Q  294 aaagtccttaa 304  Q
    || ||||||||    
T  45758027 aaggtccttaa 45758037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 24313544 - 24313670
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagtta 287  Q
    |||| ||||||| ||| |||||||||  ||||||| |||||||||||||||||||||||||| |||||||  | | ||||||||||||||||||||||||    
T  24313544 ggcactctttaaacattctaaattaaacaattattctttaaaaatgtcaaagttttcaattttcaatgcattttactacacaaattttcataaaaagtta 24313643  T
Q  288 ccatttaaagtccttaactagtgcccc 314  Q
     ||||||||||| |||||  |||||||    
T  24313644 tcatttaaagtctttaaccggtgcccc 24313670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 196 - 304
Target Start/End: Original strand, 20821303 - 20821412
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccattta 294  Q
    ||||| ||| ||||| |||||||||||| ||||||||| | |||| ||| |||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  20821303 tttaaacattctaaactaagtaattattctttaaaaatattaaaggttttaatttccaatgcactttattacacaaactttcataaaaagttaccattta 20821402  T
Q  295 aagtccttaa 304  Q
    ||||||||||    
T  20821403 aagtccttaa 20821412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 194 - 314
Target Start/End: Original strand, 25317803 - 25317923
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||| |||||| |||||| ||||||||||| ||| ||||| | ||||||||||||||||||||||  ||||||||||| ||| ||||||| |||| ||||    
T  25317803 tcttcaagcatgctaaataaagtaattattcttttaaaatttaaaagttttcaatttccaatgcatcgattacacaaacttttataaaaatttactattt 25317902  T
Q  294 aaagtccttaactagtgcccc 314  Q
    || ||||||||| ||||||||    
T  25317903 aaggtccttaaccagtgcccc 25317923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 194 - 315
Target Start/End: Original strand, 46725655 - 46725776
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 292  Q
    ||||||||||| |||||||||||| ||||||| ||||||||| ||| |||||||||| |||||||| | |||||||||||||| | ||||||||   |||    
T  46725655 tctttaagcattctaaattaagtagttattttataaaaatgttaaaattttcaattttcaatgcactttattacacaaattttta-aaaaagttgttatt 46725753  T
Q  293 taaagtccttaactagtgcccca 315  Q
    ||||||| |||||||||||||||    
T  46725754 taaagtcgttaactagtgcccca 46725776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 305
Target Start/End: Complemental strand, 33072181 - 33072108
Alignment:
Q  232 atgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    ||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||| | |||||||||    
T  33072181 atgtcaaagttttcaatttccaatgcattaattacacaaatttttataaaaaattaccatttcaggtccttaac 33072108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 281
Target Start/End: Original strand, 29612018 - 29612106
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaa 281  Q
    ||||||| ||| ||||| |||||||||||| ||||||||||| | ||||||||||||||||||||| | |||||||||| |||||||||    
T  29612018 tctttaaacattctaaaataagtaattattctttaaaaatgtgacagttttcaatttccaatgcactttattacacaaactttcataaa 29612106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 283
Target Start/End: Original strand, 37388418 - 37388494
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    ||||||||||||||||| ||||||||||| ||| |||||| ||| ||||||| |||||||||||||||| |||||||    
T  37388418 taaattaagtaattattctttaaaaatgtgaaatttttcagttttcaatgcattgattacacaaatttttataaaaa 37388494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 288
Target Start/End: Original strand, 54911194 - 54911293
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||| ||| ||||||||| |||||||| ||| ||||||| |||||||| ||||| |||| || |||||||| ||| ||||||||||||||||    
T  54911194 ggcaatctttaaacattctaaattaaataattattcttttaaaatgttaaagttttaaattttcaatacattgattacataaactttcataaaaagttac 54911293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 1511367 - 1511453
Alignment:
Q  228 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    ||||||||||||| ||||||||||||||||| ||||||||  |||||||| ||||||||||| |||||||  |||||  ||||||||    
T  1511367 aaaaatgtcaaagatttcaatttccaatgcattgattacattaattttcaaaaaaagttaccttttaaaggtcttaaagagtgcccc 1511453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 40614356 - 40614263
Alignment:
Q  212 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    |||||||||||| |||||||||||||| ||||||||||| |||||||| | |||||||||| |||| | |||| ||| |||||||||| ||||||    
T  40614356 taagtaattattctttaaaaatgtcaatgttttcaattttcaatgcactttattacacaaactttcttgaaaattta-catttaaagttcttaac 40614263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 314
Target Start/End: Original strand, 22772858 - 22772979
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaaagttaccatt 292  Q
    ||||||| ||| | ||||||||||||||||   ||| ||| ||||||||||||||||||||||| | | |||  ||||| ||||| |||||||||  |||    
T  22772858 tctttaaacattccaaattaagtaattattccataacaatttcaaagttttcaatttccaatgcaatttattctacaaactttcacaaaaagttaatatt 22772957  T
Q  293 taaagtccttaactagtgcccc 314  Q
    ||||||||||||| ||| ||||    
T  22772958 taaagtccttaacgagtacccc 22772979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 28692032 - 28691955
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 271  Q
    ||||||| |||| ||||||||||||||||| ||| ||||||| ||||||||||||||| ||| || | ||||||||||    
T  28692032 tctttaaacatattaaattaagtaattattcttttaaaatgttaaagttttcaatttctaatacaataattacacaaa 28691955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 49168725 - 49168849
Alignment:
Q  180 agaacctgtggcattctttaagcatactaaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat 278  Q
    |||| ||||| |||||||||| ||| ||||||| | |||||||| ||||||||||| | || ||||||||||| || | | |||||||||||| ||||||    
T  49168725 agaagctgtgacattctttaaacatgctaaatttactaattattcttttaaaaatggctaaattttcaatttctaaagtattgattacacaaactttcat 49168824  T
Q  279 aaaaagttaccatttaaagtccttaa 304  Q
    ||||| ||  ||||||| ||||||||    
T  49168825 aaaaa-ttttcatttaaggtccttaa 49168849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 314
Target Start/End: Complemental strand, 18399239 - 18399147
Alignment:
Q  222 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    |||| |||||| ||||||  |||| |||||| ||||| ||||||||||| ||||||| | |||||||||||||||  ||||||||| ||||||    
T  18399239 ttttataaaaaagtcaaatatttcgatttccgatgcattgattacacaacttttcatgataagttaccatttaaaagccttaactaatgcccc 18399147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 1829330 - 1829243
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    ||||||||||||||||| |||||   || ||||| ||||| ||||| |||||||||||||  ||||||||||||||| || |||||||    
T  1829330 aattattttttaaaaatatcaaatagtttaattttcaatgtactgaatacacaaattttcgcaaaaagttaccattttaaatccttaa 1829243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 53040467 - 53040558
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagt 285  Q
    |||||||| || |||||||||| ||||||| ||||||||  |||||   |||||||||||||| | ||| |||||||| |||||||||||||    
T  53040467 tctttaaggattctaaattaagaaattattatttaaaaaattcaaatacttcaatttccaatgtattgaatacacaaactttcataaaaagt 53040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 282
Target Start/End: Complemental strand, 9342757 - 9342672
Alignment:
Q  198 taagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaa 282  Q
    ||||||| ||| ||||| ||||||||  |||||||||| |||||||||||||| |||||||  | |||||||||||||| ||||||    
T  9342757 taagcattctagattaaataattattcattaaaaatgttaaagttttcaattttcaatgcattttattacacaaatttttataaaa 9342672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 48322314 - 48322241
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 267  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||  |||| ||||||||| || ||||||||    
T  48322314 tctttaagcattctaaaataagtaattatttttttaaaaagtcaaatgtttcgatttccaatacattgattaca 48322241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 50644132 - 50644189
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttc 251  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||| |||| ||||||    
T  50644132 tctttaagtatattaaattaagtagttattttttaaaaatgtcaaattttttaatttc 50644189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 313
Target Start/End: Original strand, 39651994 - 39652034
Alignment:
Q  273 tttcataaaaagttaccatttaaagtccttaactagtgccc 313  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  39651994 tttcataaaaagttaccatttaaagtccttaactaatgccc 39652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 196 - 287
Target Start/End: Complemental strand, 45584432 - 45584343
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 287  Q
    |||||||||  ||||||||||||||||| ||| ||||| |  ||||||| ||||| ||||  | |||||||||||| |||||||||||||||    
T  45584432 tttaagcatgttaaattaagtaattattcttttaaaatat--aagtttttaattttcaatatattgattacacaaactttcataaaaagtta 45584343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 297
Target Start/End: Complemental strand, 25548258 - 25548203
Alignment:
Q  242 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 297  Q
    |||||||||| |||||| |||||||||| ||||||||||||| ||| |||||||||    
T  25548258 tttcaatttctaatgcattgattacacatattttcataaaaatttatcatttaaag 25548203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 37708430 - 37708508
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 267  Q
    |||| |||||||||||| |||| |||| ||||| | |||||||| || |||  ||||||||| ||||||||||||||||    
T  37708430 ggcactctttaagcatattaaaataagcaattagtctttaaaaaagttaaacatttcaattttcaatgcactgattaca 37708508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 290
Target Start/End: Original strand, 38009026 - 38009128
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagtta 287  Q
    |||| ||||||||||| ||||||| || |||||||  |||| || ||||||  |||||||||| ||||| | | || ||||||||||||||||||| |||    
T  38009026 ggcactctttaagcattctaaattgagaaattattccttaagaaagtcaaacattttcaattttcaatggattaatcacacaaattttcataaaaactta 38009125  T
Q  288 cca 290  Q
    |||    
T  38009126 cca 38009128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 52340188 - 52340118
Alignment:
Q  235 tcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    |||||| |||| |||||| ||||| |||||||||| ||||| || | |||||||||||||||| |||||||    
T  52340188 tcaaagatttcgatttccgatgcattgattacacatatttttatgataagttaccatttaaaggccttaac 52340118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 2831545 - 2831634
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    |||||||| || | |||| ||| ||||||||||||| || ||||||  |||||||||  |||||| |||||| |||| ||||||||||||    
T  2831545 tctttaaggattccaaatcaagaaattattttttaataaagtcaaatatttcaattttaaatgcaatgattatacaagttttcataaaaa 2831634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 298
Target Start/End: Original strand, 37359467 - 37359570
Alignment:
Q  197 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaa--ttttcataaaaagttaccattt 293  Q
    ||||||||  |||||||||||||||||   ||||||||| |||||||||||||| |||| ||| | ||||||||||  || ||| ||||| |||||||||    
T  37359467 ttaagcattttaaattaagtaattattccataaaaatgttaaagttttcaattttcaattcactttattacacaaactttatca-aaaaaattaccattt 37359565  T
Q  294 aaagt 298  Q
    |||||    
T  37359566 aaagt 37359570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 40546345 - 40546398
Alignment:
Q  214 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 267  Q
    ||||||||||||||||||| ||||||  |||| |||||||||||| ||||||||    
T  40546345 agtaattattttttaaaaaagtcaaatatttcgatttccaatgcattgattaca 40546398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 19898187 - 19898107
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 297  Q
    ||||||||| || |||  |||||  ||||||||| ||||||| |||||||||| ||||||||||||| |||| || |||||    
T  19898187 aattattttatataaaaatcaaatatttcaattttcaatgcattgattacacatattttcataaaaatttacaatgtaaag 19898107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 54912058 - 54911986
Alignment:
Q  242 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    ||||||||||  ||||| |||||||||| |||||||| | |||||  |||||| || ||||||||||||||||    
T  54912058 tttcaatttcggatgcattgattacacatattttcatgataagttgtcatttataggccttaactagtgcccc 54911986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 25062034 - 25061987
Alignment:
Q  218 attattttttaaaaatgtcaaagttttcaatttccaatgcactgatta 265  Q
    |||||| ||||||||||| ||| |||||||||| ||||||||||||||    
T  25062034 attattctttaaaaatgttaaaattttcaattttcaatgcactgatta 25061987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 298
Target Start/End: Complemental strand, 48811479 - 48811372
Alignment:
Q  191 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacca 290  Q
    ||||||||||| || ||||||| || || ||||  ||||||| ||| ||  || ||| || ||||||| ||||||||||| |||||||||||| |||| |    
T  48811479 cattctttaaggatcctaaatttagaaaatattcattaaaaaagtctaatgttacaaatttcaatgcattgattacacaatttttcataaaaacttacta 48811380  T
Q  291 tttaaagt 298  Q
    || |||||    
T  48811379 ttaaaagt 48811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 284
Target Start/End: Complemental strand, 54290890 - 54290795
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaag 284  Q
    |||| |||||||||||  ||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| |||||||||||||    
T  54290890 ggcactctttaagcatgataaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaaatacacaagttttcataaaaag 54290795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 12908930 - 12908860
Alignment:
Q  190 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcact 260  Q
    ||||| ||||| |||  ||||| ||||||||||||||||||||  ||||| ||||||||||  ||||||||    
T  12908930 gcattgtttaaacattttaaataaagtaattattttttaaaaaaatcaaaattttcaatttttaatgcact 12908860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 23554781 - 23554672
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||| || || ||| ||| |||||||||||||||| |||||||||| | |||||||||||| | | ||||| || | ||||||||  || ||||||    
T  23554781 tctttaaggattcttaataaagaaattattttttaaaaa-gtcaaagtttacgatttccaatgcaataaatacacgaactatcataaaatctttccattt 23554683  T
Q  294 aaagtccttaa 304  Q
     |||| |||||    
T  23554682 taagttcttaa 23554672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 27968262 - 27968307
Alignment:
Q  260 tgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    |||||||||| |||||||| | |||||||||||||||| |||||||    
T  27968262 tgattacacatattttcatgataagttaccatttaaaggccttaac 27968307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 314
Target Start/End: Original strand, 34758946 - 34759047
Alignment:
Q  213 aagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 312  Q
    ||||||||||||| |||||| || |||  |||| | | |  ||||| |||||||| | |||| ||| | ||||||| |||||||| ||||||||||||||    
T  34758946 aagtaattattttataaaaaagtgaaatatttcgactcctgatgcattgattacatatatttccatgataagttactatttaaagcccttaactagtgcc 34759045  T
Q  313 cc 314  Q
    ||    
T  34759046 cc 34759047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 41750832 - 41750755
Alignment:
Q  222 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtc 299  Q
    |||||||| ||||||||| |||| ||||| ||||||| |||||| || || ||| || | || |||||||||||||||    
T  41750832 ttttttaataatgtcaaactttttaatttacaatgcattgattatactaagttttatcacaacttaccatttaaagtc 41750755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 43803992 - 43804061
Alignment:
Q  219 ttattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| |||||||||||||||||    
T  43803992 ttattctttaaaaaagtcaaacaattcaatttccaatgtattaaatacacaagttttcataaaaagttac 43804061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 288
Target Start/End: Complemental strand, 4305260 - 4305156
Alignment:
Q  184 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    |||| |||| |||||||| |||||||||| || |  ||||||||||||| ||||||  ||  || ||| |||| | ||||||||| | ||||||||||||    
T  4305260 cctggggcactctttaaggatactaaatttagaatatattttttaaaaaagtcaaatattataaattctaatgtattgattacacgatttttcataaaaa 4305161  T
Q  284 gttac 288  Q
     ||||    
T  4305160 cttac 4305156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 40690235 - 40690287
Alignment:
Q  243 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    |||||||| |||| || ||| ||||||| ||||||||||||| ||||||||||    
T  40690235 ttcaattttcaatacattgaatacacaagttttcataaaaagctaccatttaa 40690287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 46547858 - 46547794
Alignment:
Q  224 ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||||| ||||||   |||||||||||||||| ||| |||| || |||||||||||| ||||    
T  46547858 ttttaaaaaagtcaaataattcaatttccaatgcattgaatacataatttttcataaaaaattac 46547794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 46712009 - 46711949
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 267  Q
    |||| |||||||||||| |||||||| ||||||  |||  |||||||||||| ||||||||    
T  46712009 taaaataagtaattattctttaaaaaagtcaaacattttgatttccaatgcattgattaca 46711949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 53766777 - 53766702
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    |||||||||||||||| || ||||  |||||||| ||||||| | | |||||||| ||||||||||  |||||||||    
T  53766777 aattattttttaaaaaagtaaaag-cttcaattttcaatgcaataaatacacaaactttcataaaatattaccattt 53766702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 192 - 315
Target Start/End: Complemental strand, 14309197 - 14309071
Alignment:
Q  192 attctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcata-aaaagtta--c 288  Q
    |||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| | |||||||||||||||||| |||| |||  |    
T  14309197 attctttaagcatattaaattaagtagttattctttaaaaatatcaaagttttcaatttccaatgcattaattacacaaattttcataaaaaaattactc 14309098  T
Q  289 catttaaagtccttaactagtgcccca 315  Q
    ||||||| |||||||||||||||||||    
T  14309097 catttaaggtccttaactagtgcccca 14309071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 310
Target Start/End: Complemental strand, 38595037 - 38594923
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 295  Q
    |||||| || |||||||||||||||||| ||| ||||||||||| |||||||||||||||||| | |||| | ||||||||||||||| ||| |||||||    
T  38595037 tttaagtatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcattaattatataaattttcataaaaatttatcatttaa 38594938  T
Q  296 agtccttaactagtg 310  Q
    |||||||||| ||||    
T  38594937 agtccttaaccagtg 38594923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 194 - 313
Target Start/End: Complemental strand, 26453748 - 26453630
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| |||  ||||||||||||| ||||||||||||||||||| |||||||||| |||||| ||| ||||||||||||| ||||||  |||||||||    
T  26453748 tctttaaacattttaaattaagtaat-attttttaaaaatgtcaaacttttcaattttcaatgcgctggttacacaaatttttataaaagtttaccattt 26453650  T
Q  294 aaagtccttaactagtgccc 313  Q
    || |||||||| ||||||||    
T  26453649 aaggtccttaattagtgccc 26453630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 16636742 - 16636656
Alignment:
Q  223 tttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagt 309  Q
    ||||||||||| |||||||| ||||||| ||||||||| |||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  16636742 tttttaaaaatatcaaagttgtcaattttcaatgcactaattacacaaacttttataaaaagttaccatttaaggtccttaactagt 16636656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 312
Target Start/End: Complemental strand, 17774388 - 17774272
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 294  Q
    |||||||||  ||||| ||||||||||| ||||||||| ||||| ||||||||||||||| ||| | |||||||||| ||||||||||||||| ||||||    
T  17774388 tttaagcattttaaatcaagtaattattctttaaaaatatcaaatttttcaatttccaatacactttattacacaaa-tttcataaaaagttatcattta 17774290  T
Q  295 aagtccttaactagtgcc 312  Q
    ||||| ||||| ||||||    
T  17774289 aagtcattaaccagtgcc 17774272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 26432261 - 26432378
Alignment:
Q  195 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 294  Q
    ||||||||||  ||||||||||||||||||||| |||||   ||| |||||||||||||||| ||||||||||| || ||||||||||| |||||||||     
T  26432261 ctttaagcattttaaattaagtaattatttttttaaaataataaacttttcaatttccaatgtactgattacactaactttcataaaaatttaccatttt 26432360  T
Q  295 aagtccttaactagtgcc 312  Q
    | || |||||||| ||||    
T  26432361 aggttcttaactaatgcc 26432378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 207 - 311
Target Start/End: Original strand, 22601786 - 22601890
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 306  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||| ||||  |||||||| ||||||||| ||||||| ||| ||||||| ||| ||||||    
T  22601786 taaattaagtaattattttttaaaaatatcaaaatttttaattttcaataaactgattatacaaatttttataaaaatttatcatttaaggtctttaact 22601885  T
Q  307 agtgc 311  Q
    |||||    
T  22601886 agtgc 22601890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 312
Target Start/End: Complemental strand, 27325917 - 27325814
Alignment:
Q  209 aattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactag 308  Q
    ||||| ||||||||| ||||||||||||||| |||||||||| |||||||||| |||||  ||||||  |||||| ||| ||||||| ||||||||||||    
T  27325917 aattaggtaattattctttaaaaatgtcaaacttttcaattttcaatgcactggttacattaatttttgtaaaaatttatcatttaaggtccttaactag 27325818  T
Q  309 tgcc 312  Q
    ||||    
T  27325817 tgcc 27325814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 282
Target Start/End: Original strand, 12221435 - 12221523
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 282  Q
    ||||||| |||||||||||||||| ||||| ||||||| |||||||||||| ||||| ||||| |||||||||| |||||||| |||||    
T  12221435 tctttaaacatactaaattaagtagttattctttaaaattgtcaaagtttttaattttcaatgtactgattacataaattttcgtaaaa 12221523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 41568775 - 41568708
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg 261  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  41568775 tctttaagcatactaaattaagttattattcttcaaaaatgtcaaagttttcaattttcaatgcactg 41568708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 288
Target Start/End: Original strand, 4695070 - 4695164
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||||||| |||||||||  ||||||| ||||||||| | |||||||| |||||||||||||||||||| ||||| || |||||||| ||||    
T  4695070 tctttaagcatgctaaattaaaaaattattctttaaaaatattaaagtttttaatttccaatgcactgattatacaaacttccataaaaaattac 4695164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 21259513 - 21259415
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 305  Q
    ||||||||  ||||||| |||||| |||||||| |||| ||||| |||||||||||||||||||| || |||||||||||| ||||||| ||| |||||    
T  21259513 taaattaaaaaattattctttaaagatgtcaaaatttttaattttcaatgcactgattacacaaacttccataaaaagttatcatttaaggtctttaac 21259415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 314
Target Start/End: Complemental strand, 5356410 - 5356286
Alignment:
Q  190 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacc 289  Q
    |||||||||||| |||| ||| |||| ||||| ||| |||||| ||||||  |||| |||| | ||||| |||||||||| |||||||| | ||||||||    
T  5356410 gcattctttaaggataccaaaataagaaattaatttataaaaacgtcaaatatttcgattttcgatgcattgattacacatattttcatgataagttacc 5356311  T
Q  290 atttaaagtccttaactagtgcccc 314  Q
    |||||||| ||||||| ||| ||||    
T  5356310 atttaaagaccttaaccagtacccc 5356286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 29829588 - 29829704
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| |||  ||||||| ||||||||||||||||||||||| | |||||| |||||||| ||||||||| |||||  |||||||||| | || ||||    
T  29829588 tctttaaacattttaaattatgtaattattttttaaaaatgtcacacttttcagtttccaattcactgattatacaaacattcataaaaattaactattt 29829687  T
Q  294 aaagtccttaactagtg 310  Q
     | ||| ||||||||||    
T  29829688 gaggtctttaactagtg 29829704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 3263772 - 3263862
Alignment:
Q  221 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 311  Q
    ||||| |||||| ||||||| |||| |||||| ||||| |||||||||| ||||| || | |||||||||||||||| |||||||||||||    
T  3263772 attttataaaaaagtcaaagatttcgatttccgatgcattgattacacatattttaatgataagttaccatttaaagaccttaactagtgc 3263862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 10228317 - 10228426
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| |||| | ||||||||||| ||| ||||| | |||||||||||||||| |||||||| ||||||||| |||  ||||||||||| ||||    
T  10228317 tctttaagcatgctaa-taaagtaattattctttcaaaatttaaaagttttcaatttccgatgcactggttacacaaacttttttaaaaagttactattt 10228415  T
Q  294 aaagtccttaa 304  Q
    || ||| ||||    
T  10228416 aatgtctttaa 10228426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 27794944 - 27794854
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaacta 307  Q
    ||||||| ||| ||||| ||||| ||||||||||| |||||  |||||| ||||| ||| ||||||| |||||||||||||||||||||||    
T  27794944 aattattgttttaaaatatcaaaattttcaatttcaaatgcgatgattatacaaacttttataaaaaattaccatttaaagtccttaacta 27794854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 5758555 - 5758680
Alignment:
Q  189 ggcattctttaagcatactaaattaa--gtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtt 286  Q
    |||| ||||||||||| |||||||||  |||| |||| |||||||| |  |||  |||||||| |||||  ||||| |||||||| ||||||||||| ||    
T  5758555 ggcactctttaagcattctaaattaaaagtaactattctttaaaaaagcgaaacatttcaattcccaat--actgaatacacaaactttcataaaaactt 5758652  T
Q  287 accatttaaagtccttaactagtgcccc 314  Q
    ||||||||||||||||||  ||||||||    
T  5758653 accatttaaagtccttaaaaagtgcccc 5758680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 10410443 - 10410567
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagtta 287  Q
    |||| ||||||| | | ||||||||||||||  |||||||||||||||| | | ||||||||||||||||| | |||  ||||| ||| |||||||||||    
T  10410443 ggcactctttaaactttctaaattaagtaatatttttttaaaaatgtcagaatattcaatttccaatgcactttatttaacaaacttttataaaaagtta 10410542  T
Q  288 ccatttaaagtccttaactagtgcc 312  Q
    | ||||||| | |||||| ||||||    
T  10410543 caatttaaaatgcttaaccagtgcc 10410567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 26686747 - 26686667
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 287  Q
    |||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||  ||||||||||| |||||||||||||||    
T  26686747 taaattaagtaagtattctttaaaaatgtaaaagtttttaattttcaatacatcgattacacaaactttcataaaaagtta 26686667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 26956478 - 26956398
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 287  Q
    |||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||  ||||||||||| |||||||||||||||    
T  26956478 taaattaagtaagtattctttaaaaatgtaaaagtttttaattttcaatacatcgattacacaaactttcataaaaagtta 26956398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 36609237 - 36609150
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    ||||| ||| ||||||||| |||||||| || |||||| |||||||||||||||| ||||| ||| |||||||||| ||| |||||||    
T  36609237 tttaaacattctaaattaaataattattcttcaaaaatatcaaagttttcaattttcaatgtactaattacacaaacttttataaaaa 36609150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 8247092 - 8247180
Alignment:
Q  221 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagt 309  Q
    ||||| |||||| ||||||  |||| |||||| ||||| |||||| |||| ||||||| | |||||||||||||||| |||||||||||    
T  8247092 attttataaaaaagtcaaatatttcgatttccgatgcattgattatacaacttttcatgataagttaccatttaaagaccttaactagt 8247180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 313
Target Start/End: Original strand, 43000760 - 43000868
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaa-gttaccatttaaagtccttaa 304  Q
    ||||| ||||||||||| ||||||||||||||| |||| ||||| |||||||| |  | | ||||| ||||||||||| || || ||||||||| |||||    
T  43000760 taaataaagtaattattctttaaaaatgtcaaaatttttaattttcaatgcactttgtcaaacaaactttcataaaaaggtaacaatttaaagtacttaa 43000859  T
Q  305 ctagtgccc 313  Q
    |||||||||    
T  43000860 ctagtgccc 43000868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 312
Target Start/End: Original strand, 28639570 - 28639669
Alignment:
Q  214 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 312  Q
    |||||||||| ||||||||||| ||||||||||  ||||||||||| | |||||||||| ||| ||||||| ||   |||||||||||||| | ||||||    
T  28639570 agtaattattctttaaaaatgttaaagttttcagcttccaatgcactttattacacaaacttttataaaaaattgttatttaaagtccttatccagtgcc 28639669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 10051755 - 10051845
Alignment:
Q  221 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 311  Q
    ||||| |||||| ||||||  |||  |||||| ||||| |||||| |||| ||||||||| ||||||||||||||||  ||||||||||||    
T  10051755 attttataaaaaagtcaaatatttatatttccgatgcattgattatacaacttttcataataagttaccatttaaaggtcttaactagtgc 10051845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 31672444 - 31672530
Alignment:
Q  228 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    ||||| ||||||  ||||||||||||||||| |||||||| ||| ||||| ||||||||||| |||||||  |||||  ||||||||    
T  31672444 aaaaaagtcaaatgtttcaatttccaatgcattgattacaaaaaatttcaaaaaaagttaccttttaaaggtcttaaagagtgcccc 31672530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 31914168 - 31914277
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||  ||| |||||    |||| ||| ||||| || ||||||||| | |||||||||    
T  31914168 tctttaagcattctaaattaagtaattattctttaaaaa-gtcaaacattttaattttttgtgcattgaatacaccaaatttcataaagatttaccattt 31914266  T
Q  294 aaagtccttaa 304  Q
    ||| |||||||    
T  31914267 aaaatccttaa 31914277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 283
Target Start/End: Original strand, 39177675 - 39177768
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    |||| |||||||| || |||||| ||||||||||  ||| ||||| | ||||||||||||||||||| |||||||| ||||| |||| |||||||    
T  39177675 ggcactctttaag-atgctaaataaagtaattatcctttcaaaatttaaaagttttcaatttccaatacactgattgcacaactttttataaaaa 39177768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 26663635 - 26663708
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 269  Q
    ||||||||| ||||| |||| |||||||||||||||| ||||||  |||| |||||||||| | ||||||||||    
T  26663635 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattacaca 26663708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 26935230 - 26935303
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 269  Q
    ||||||||| ||||| |||| |||||||||||||||| ||||||  |||| |||||||||| | ||||||||||    
T  26935230 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattacaca 26935303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 22473493 - 22473553
Alignment:
Q  254 atgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 314  Q
    ||||| |||||||||| |||||||  | |||||||||||||||| ||||||||||||||||    
T  22473493 atgcattgattacacatattttcacgataagttaccatttaaagcccttaactagtgcccc 22473553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 288
Target Start/End: Original strand, 967100 - 967194
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||||||||| |||||| |  |||||| ||||||||  |||||   |||||||||||||||| ||| ||||  ||||||||| |||||||||    
T  967100 tctttaagcataccaaattaggatattattctttaaaaaattcaaatagttcaatttccaatgcattgaatacatgaattttcatgaaaagttac 967194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 298
Target Start/End: Original strand, 30104797 - 30104907
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 287  Q
    |||| ||||||||||| | ||||| ||||| |||||||| |||| |||||   || |||||||||||||| | | ||||||| |||||| |||||| |||    
T  30104797 ggcactctttaagcatcccaaatttagtaactatttttttaaaaagtcaacaattacaatttccaatgcattcaatacacaacttttcattaaaaactta 30104896  T
Q  288 ccatttaaagt 298  Q
    ||| |||||||    
T  30104897 ccacttaaagt 30104907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 30501253 - 30501127
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 287  Q
    |||| ||||||||||| | ||||| |||||||||| ||| |||| |||||   || ||||||||||| || | | ||||||| |||||| | |||| |||    
T  30501253 ggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaactta 30501154  T
Q  288 ccatttaaagtccttaactagtgcccc 314  Q
    | ||||||||| |||||| ||||||||    
T  30501153 ctatttaaagtgcttaacaagtgcccc 30501127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 30541596 - 30541470
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 287  Q
    |||| ||||||||||| | ||||| |||||||||| ||| |||| |||||   || ||||||||||| || | | ||||||| |||||| | |||| |||    
T  30541596 ggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaactta 30541497  T
Q  288 ccatttaaagtccttaactagtgcccc 314  Q
    | ||||||||| |||||| ||||||||    
T  30541496 ctatttaaagtgcttaacaagtgcccc 30541470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 31889662 - 31889708
Alignment:
Q  242 tttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||||||||| |||||| |||||||||| ||||||||||||||||||    
T  31889662 tttcaatttctaatgcattgattacacatattttcataaaaagttac 31889708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 34032203 - 34032125
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 267  Q
    |||| ||||||||||| ||||| |||||||||||| |||||||| || |||  |||||||||| || ||| ||||||||    
T  34032203 ggcactctttaagcattctaaaataagtaattattctttaaaaaagttaaatatttcaatttcaaaggcaatgattaca 34032125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 14475085 - 14475009
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||| | |||||||||||||  ||||||||||  ||||  |||||||| ||||||||| |||||||||| ||||    
T  14475085 aattattctataaaaatgtcaaatatttcaatttcagatgctttgattacataaattttcaaaaaaagttactattt 14475009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 304
Target Start/End: Original strand, 14042484 - 14042571
Alignment:
Q  217 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    ||||||| |||||||| ||||||  |||  |||||||||||| |||||| ||||||||| || |||| ||  ||||||||||| ||||    
T  14042484 aattattatttaaaaaagtcaaatattttgatttccaatgcattgattatacaaatttttattaaaatttgtcatttaaagtctttaa 14042571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 25437983 - 25437888
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaat-gtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    ||||||||||| |||||||||| | ||||| ||||||||  || |||   |||||||||||||| | | | ||||||| |||||||||||||||||    
T  25437983 tctttaagcatgctaaattaagaagttattctttaaaaaaagtgaaacagttcaatttccaatgtattaaatacacaagttttcataaaaagttac 25437888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 303
Target Start/End: Original strand, 779079 - 779192
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||| ||| | ||| | ||||||||||||||||||| || |||  |||| |||||||||||| ||||||||||  ||||| |||| |  |||    
T  779079 ggcactctttaaacattcaaaaattagtaattattttttaaaaa-gttaaatgtttcgatttccaatgcattgattacacactttttcgtaaatacatac 779177  T
Q  289 catttaaagtcctta 303  Q
     ||||| ||||||||    
T  779178 tatttatagtcctta 779192  T

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Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 310
Target Start/End: Complemental strand, 28207778 - 28207696
Alignment:
Q  229 aaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaactagtg 310  Q
    |||||||||||||||| ||| || ||||||||  ||| |||||| ||||||||| | || | ||||||||| |||||||||||    
T  28207778 aaaatgtcaaagtttttaatatcaaatgcactttattgcacaaactttcataaacatttgctatttaaagttcttaactagtg 28207696  T

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Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 2918705 - 2918616
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    |||||||||||   ||||| | |||||||||||||||||||||||   ||  ||||||||||||| | | ||||||| ||||||| ||||    
T  2918705 tctttaagcatttcaaatttaataattattttttaaaaatgtcaactattataatttccaatgcatttaatacacaacttttcattaaaa 2918616  T

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Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 20125713 - 20125652
Alignment:
Q  243 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 304  Q
    |||||||| | ||||||| | | ||||| |||||||||||| |||| |||||||||||||||    
T  20125713 ttcaattttcgatgcactaaatgcacaatttttcataaaaatttactatttaaagtccttaa 20125652  T

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Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 295
Target Start/End: Complemental strand, 24041131 - 24041030
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 293  Q
    ||||||||||||  |||||| | ||||||| ||||||||  |||||   || |||||||||| || | | |||| || ||||||||||||||||| ||||    
T  24041131 tctttaagcatatcaaattatgaaattattctttaaaaaattcaaatagtttaatttccaatacattaaatacataacttttcataaaaagttactattt 24041032  T
Q  294 aa 295  Q
    ||    
T  24041031 aa 24041030  T

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Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 36160317 - 36160362
Alignment:
Q  194 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaa 239  Q
    ||||||||||| ||||| |||| |||||||||||||||| ||||||    
T  36160317 tctttaagcattctaaaataagcaattattttttaaaaaagtcaaa 36160362  T

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Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 9740932 - 9740968
Alignment:
Q  196 tttaagcatactaaattaagtaattattttttaaaaa 232  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  9740932 tttaaacattctaaattaagtaattattttttaaaaa 9740968  T

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Target: scaffold0010 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 288
Target Start/End: Original strand, 26694 - 26793
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 288  Q
    |||| ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||    
T  26694 ggcactctttaagcatgctaaattaagtaattattattttaaaatgtcaaagttttcaattttcaatgcactgattacacaaactttcgtaaaaagttac 26793  T

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Target: scaffold0236 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 315
Target Start/End: Original strand, 19578 - 19686
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 306  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||  |||  |  ||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  19578 taaattaagtaattattctttaaaaatgttaaagttttcaatttttaatatatcgattacacaaattttcataaaaagttatcatttaaggtctttaact 19677  T
Q  307 agtgcccca 315  Q
    |||||||||    
T  19678 agtgcccca 19686  T

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Target: scaffold0037 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 310
Target Start/End: Original strand, 35274 - 35376
Alignment:
Q  207 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 306  Q
    ||||| ||||||||||||||||||| ||| ||| |||||||||| || |||| |||||||| ||| ||||||||||| |||| || ||| ||||||||||    
T  35274 taaatcaagtaattattttttaaaa-tgttaaacttttcaattttcagtgcaatgattacataaactttcataaaaatttactatctaatgtccttaact 35372  T
Q  307 agtg 310  Q
    ||||    
T  35373 agtg 35376  T

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Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 5755 - 5816
Alignment:
Q  189 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaattt 250  Q
    |||| |||||||| ||  |||||||||||||| || ||||||||||||||||||||||||||    
T  5755 ggcactctttaagaattttaaattaagtaatttttctttaaaaatgtcaaagttttcaattt 5816  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 219185 - 219277
Alignment:
Q  191 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 283  Q
    ||||||||||||||  ||||||| | ||||||| |||| ||| ||||||   |||||||||||||||| | | |||| | ||||| |||||||    
T  219185 cattctttaagcattttaaattaggaaattattctttacaaaagtcaaatagttcaatttccaatgcattaaatacatatatttttataaaaa 219277  T

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