View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3712_high_10 (Length: 267)
Name: NF3712_high_10
Description: NF3712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3712_high_10 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 31860467 - 31860733
Alignment:
| Q |
1 |
aagaattcttatccttggattgaaccaaaagatatgataccaacttttggaaaaaacctttataaaaaataataataaaggaatgcaatcacaacacata |
100 |
Q |
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| T |
31860467 |
aagaattcttatccttggattgaaccaaaagatatgataccaacttttggaaaaaacctttataaaaaataataataaaggaatgcaatcacaacacata |
31860566 |
T |
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| Q |
101 |
aacacaatatagaaactctaaaacaagtgaaaaaaccacgaccgttgtctactgacaagatgacagctaaagaatacaactttatgtacaaaattacaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31860567 |
aacacaatatagaaactctaaaacaagtgaaaaaaccacgaccgttgtctactgacaagatgacagctaaagaatacaactttatgtacaaaattacaac |
31860666 |
T |
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| Q |
201 |
acatagattactctaaaacactcaccaacccccagtacatcaacaccctccaaaggaaatattaaat |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31860667 |
acatagattactctaaaacactcaccaacccccagtacatcaacaccctccaaaggaaatattaaat |
31860733 |
T |
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