View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3712_low_16 (Length: 217)
Name: NF3712_low_16
Description: NF3712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3712_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 7418900 - 7419079
Alignment:
| Q |
18 |
tcttcgtttctgaacaaaaactgattattattatttccactgttgttgttattttcttcttgttctcttgcttcttctttgcctcttccactgcttagag |
117 |
Q |
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| T |
7418900 |
tcttcgtttctgaacacaaactgattattattatttccactgttgttgttattttcttcttgttctcttgcttcttctttgcctcttccactgcttagag |
7418999 |
T |
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| Q |
118 |
agaagaaaccagccatgttgttttgtaacacaaaaatgaaacgatcttccctaattcagttatagttatagcaataacat |
197 |
Q |
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| T |
7419000 |
agaagaaaccagccatgttgttttgtaacacaaaaatgaaacgatcttccctaatttagttatagttatagcaataacat |
7419079 |
T |
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