View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3712_low_6 (Length: 362)

Name: NF3712_low_6
Description: NF3712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3712_low_6
NF3712_low_6
[»] chr8 (57 HSPs)
chr8 (1-341)||(15808960-15809300)
chr8 (1-339)||(28283473-28283813)
chr8 (1-340)||(3873749-3874091)
chr8 (1-339)||(43529871-43530209)
chr8 (1-339)||(41384493-41384825)
chr8 (1-338)||(41382420-41382754)
chr8 (1-339)||(608470-608815)
chr8 (180-339)||(32339094-32339253)
chr8 (222-339)||(3265635-3265752)
chr8 (1-127)||(32339264-32339390)
chr8 (2-188)||(181434-181617)
chr8 (1-127)||(24873435-24873563)
chr8 (1-84)||(15072712-15072791)
chr8 (2-101)||(14419446-14419541)
chr8 (1-84)||(14807753-14807832)
chr8 (1-84)||(12517278-12517359)
chr8 (1-84)||(3886172-3886251)
chr8 (1-84)||(15067983-15068062)
chr8 (1-84)||(27107151-27107230)
chr8 (1-84)||(33541642-33541721)
chr8 (1-84)||(35872632-35872711)
chr8 (1-101)||(13858738-13858834)
chr8 (258-329)||(13986304-13986374)
chr8 (1-84)||(4424020-4424099)
chr8 (1-84)||(18810710-18810789)
chr8 (1-84)||(27826988-27827067)
chr8 (1-84)||(27829299-27829378)
chr8 (1-84)||(44720845-44720924)
chr8 (1-101)||(5622992-5623088)
chr8 (258-329)||(30679186-30679256)
chr8 (1-84)||(1225168-1225247)
chr8 (1-84)||(18812895-18812974)
chr8 (1-84)||(26775203-26775282)
chr8 (1-84)||(28251821-28251900)
chr8 (1-41)||(36865579-36865619)
chr8 (1-41)||(37214464-37214504)
chr8 (1-84)||(5372432-5372510)
chr8 (1-81)||(22684910-22684996)
chr8 (2-41)||(25952562-25952601)
chr8 (1-84)||(14477278-14477357)
chr8 (1-84)||(30480757-30480836)
chr8 (10-84)||(2468361-2468431)
chr8 (1-46)||(43082009-43082054)
chr8 (173-259)||(11701364-11701447)
chr8 (185-256)||(13986214-13986285)
chr8 (10-84)||(21482324-21482394)
chr8 (1-41)||(27911056-27911095)
chr8 (1-41)||(27957475-27957514)
chr8 (53-84)||(43081960-43081991)
chr8 (34-80)||(14419780-14419826)
chr8 (43-84)||(6375991-6376032)
chr8 (9-107)||(15185972-15186066)
chr8 (258-287)||(27820149-27820178)
chr8 (58-107)||(31162192-31162241)
chr8 (1-34)||(43079650-43079683)
chr8 (285-329)||(11701435-11701479)
chr8 (57-89)||(31035064-31035096)
[»] chr5 (65 HSPs)
chr5 (1-339)||(18468698-18469036)
chr5 (1-339)||(27912219-27912561)
chr5 (1-342)||(18511466-18511805)
chr5 (1-339)||(25803707-25804050)
chr5 (1-336)||(18509572-18509904)
chr5 (1-319)||(10586549-10586867)
chr5 (1-339)||(27910135-27910475)
chr5 (1-339)||(15551925-15552270)
chr5 (1-339)||(26097421-26097758)
chr5 (58-339)||(3373348-3373630)
chr5 (2-339)||(26098506-26098841)
chr5 (1-259)||(18466453-18466709)
chr5 (17-343)||(18596322-18596656)
chr5 (156-341)||(21288527-21288713)
chr5 (187-332)||(17415748-17415893)
chr5 (235-340)||(6661929-6662034)
chr5 (260-339)||(40221282-40221361)
chr5 (57-259)||(15143262-15143460)
chr5 (1-81)||(4410006-4410086)
chr5 (1-84)||(21684705-21684794)
chr5 (1-206)||(40221340-40221547)
chr5 (1-84)||(1189863-1189947)
chr5 (11-127)||(41585970-41586082)
chr5 (1-84)||(2818590-2818669)
chr5 (285-339)||(18466411-18466465)
chr5 (256-329)||(5779144-5779217)
chr5 (2-84)||(20507717-20507795)
chr5 (285-340)||(15143219-15143274)
chr5 (1-84)||(25921727-25921806)
chr5 (1-84)||(31542681-31542760)
chr5 (11-125)||(6661446-6661555)
chr5 (1-84)||(38882051-38882131)
chr5 (1-81)||(39854433-39854508)
chr5 (1-84)||(21947973-21948051)
chr5 (1-84)||(12556177-12556256)
chr5 (1-84)||(17072829-17072908)
chr5 (1-84)||(25904049-25904128)
chr5 (1-84)||(31545026-31545105)
chr5 (1-81)||(10529353-10529429)
chr5 (1-84)||(2174865-2174944)
chr5 (1-84)||(4236575-4236654)
chr5 (1-84)||(31179625-31179704)
chr5 (1-83)||(10474577-10474655)
chr5 (1-46)||(34477308-34477353)
chr5 (1-46)||(34479673-34479718)
chr5 (1-106)||(6756419-6756519)
chr5 (1-84)||(16092454-16092537)
chr5 (11-84)||(36402592-36402661)
chr5 (1-84)||(16776103-16776183)
chr5 (41-84)||(31466268-31466311)
chr5 (1-84)||(24126802-24126881)
chr5 (1-84)||(31472867-31472946)
chr5 (10-84)||(36208526-36208597)
chr5 (1-81)||(6747253-6747331)
chr5 (1-41)||(20043035-20043075)
chr5 (4-80)||(37706037-37706109)
chr5 (1-84)||(39398247-39398325)
chr5 (1-84)||(695835-695914)
chr5 (1-79)||(17818744-17818817)
chr5 (1-84)||(34530920-34530999)
chr5 (258-292)||(2532750-2532784)
chr5 (1-84)||(20044956-20045035)
chr5 (39-84)||(2723913-2723958)
chr5 (1-46)||(6745049-6745094)
chr5 (186-259)||(32520241-32520316)
[»] chr3 (91 HSPs)
chr3 (1-339)||(746422-746762)
chr3 (1-339)||(457950-458289)
chr3 (1-341)||(455571-455912)
chr3 (1-339)||(25533107-25533447)
chr3 (1-339)||(42991953-42992291)
chr3 (1-339)||(10621782-10622127)
chr3 (1-341)||(4104147-4104485)
chr3 (13-339)||(53915760-53916082)
chr3 (43-337)||(42989954-42990249)
chr3 (1-339)||(51943042-51943376)
chr3 (11-339)||(41848804-41849147)
chr3 (1-343)||(53917916-53918254)
chr3 (1-340)||(1313081-1313414)
chr3 (11-339)||(27635889-27636212)
chr3 (1-127)||(6561694-6561815)
chr3 (265-339)||(6561613-6561687)
chr3 (256-329)||(53974124-53974197)
chr3 (1-84)||(6063698-6063779)
chr3 (1-84)||(38210294-38210375)
chr3 (1-84)||(38889965-38890045)
chr3 (5-84)||(10084645-10084724)
chr3 (173-329)||(11066255-11066429)
chr3 (1-84)||(11170330-11170409)
chr3 (256-329)||(11072644-11072717)
chr3 (1-81)||(4308533-4308609)
chr3 (5-84)||(10191565-10191644)
chr3 (1-84)||(1626935-1627014)
chr3 (1-84)||(3859454-3859533)
chr3 (1-84)||(5522867-5522946)
chr3 (1-84)||(11163076-11163155)
chr3 (1-84)||(15780786-15780865)
chr3 (1-84)||(45882865-45882944)
chr3 (1-84)||(6066048-6066128)
chr3 (1-79)||(32219026-32219100)
chr3 (1-84)||(47149147-47149231)
chr3 (1-81)||(24979636-24979712)
chr3 (1-81)||(51727258-51727334)
chr3 (1-84)||(10958575-10958654)
chr3 (1-84)||(26720474-26720553)
chr3 (1-84)||(47701847-47701926)
chr3 (6-84)||(1321367-1321441)
chr3 (1-84)||(10956279-10956358)
chr3 (1-84)||(18097152-18097232)
chr3 (1-84)||(18099422-18099501)
chr3 (1-81)||(27101433-27101513)
chr3 (184-307)||(54287487-54287627)
chr3 (1-84)||(5191579-5191658)
chr3 (1-81)||(35918201-35918277)
chr3 (1-81)||(43226015-43226091)
chr3 (1-101)||(51675007-51675103)
chr3 (1-84)||(12268218-12268297)
chr3 (5-84)||(22114561-22114636)
chr3 (1-84)||(28137547-28137626)
chr3 (1-84)||(35777347-35777426)
chr3 (1-84)||(43421667-43421746)
chr3 (1-84)||(43423715-43423794)
chr3 (1-84)||(53468707-53468786)
chr3 (1-46)||(30005801-30005846)
chr3 (1-84)||(32264291-32264374)
chr3 (1-41)||(28102254-28102294)
chr3 (1-41)||(42990269-42990309)
chr3 (1-81)||(9604859-9604940)
chr3 (1-101)||(28761680-28761776)
chr3 (1-81)||(43228220-43228296)
chr3 (1-81)||(50493928-50494004)
chr3 (1-84)||(880704-880783)
chr3 (1-84)||(3314610-3314689)
chr3 (1-84)||(5927016-5927095)
chr3 (1-84)||(6231375-6231454)
chr3 (189-254)||(53974011-53974077)
chr3 (299-340)||(27000082-27000123)
chr3 (14-107)||(53597144-53597232)
chr3 (1-41)||(28100293-28100333)
chr3 (1-101)||(3306708-3306804)
chr3 (189-259)||(11072731-11072801)
chr3 (1-84)||(36011753-36011832)
chr3 (1-84)||(48361923-48362001)
chr3 (1-84)||(53591121-53591200)
chr3 (2-84)||(890024-890102)
chr3 (1-46)||(29956646-29956691)
chr3 (3-80)||(39715400-39715472)
chr3 (39-107)||(23633363-23633431)
chr3 (10-107)||(1618916-1619012)
chr3 (212-259)||(5535882-5535929)
chr3 (53-84)||(25388824-25388855)
chr3 (1-84)||(28180950-28181027)
chr3 (34-84)||(6719392-6719442)
chr3 (57-126)||(11072830-11072898)
chr3 (1-41)||(4560517-4560557)
chr3 (9-41)||(6719357-6719389)
chr3 (1-41)||(54884122-54884162)
[»] chr1 (94 HSPs)
chr1 (1-339)||(31735777-31736115)
chr1 (1-339)||(47905956-47906295)
chr1 (1-339)||(39931762-39932098)
chr1 (1-339)||(9463500-9463840)
chr1 (1-312)||(21948443-21948756)
chr1 (1-339)||(27337194-27337532)
chr1 (1-339)||(9459673-9460013)
chr1 (1-340)||(24325346-24325688)
chr1 (2-339)||(27339387-27339730)
chr1 (1-341)||(15295090-15295441)
chr1 (1-340)||(28998509-28998845)
chr1 (1-340)||(29004225-29004561)
chr1 (1-340)||(17324892-17325228)
chr1 (1-339)||(48664852-48665202)
chr1 (1-340)||(2949487-2949816)
chr1 (154-339)||(6115532-6115718)
chr1 (149-339)||(45693834-45694024)
chr1 (147-339)||(4131690-4131882)
chr1 (4-217)||(2510583-2510801)
chr1 (151-339)||(6997214-6997395)
chr1 (34-227)||(46432013-46432207)
chr1 (224-339)||(46432521-46432636)
chr1 (141-301)||(6996067-6996221)
chr1 (186-339)||(16561131-16561284)
chr1 (173-329)||(13785662-13785835)
chr1 (39-205)||(26520408-26520580)
chr1 (173-259)||(11693580-11693666)
chr1 (1-84)||(47177304-47177387)
chr1 (1-84)||(47179655-47179738)
chr1 (1-84)||(28207322-28207401)
chr1 (1-114)||(6995956-6996065)
chr1 (1-84)||(12302761-12302845)
chr1 (1-84)||(28842439-28842520)
chr1 (211-329)||(32260746-32260881)
chr1 (138-200)||(6115479-6115541)
chr1 (1-84)||(13215027-13215106)
chr1 (1-84)||(41646866-41646945)
chr1 (1-84)||(20302405-20302484)
chr1 (1-84)||(38925734-38925813)
chr1 (1-84)||(51749985-51750064)
chr1 (1-84)||(28840624-28840705)
chr1 (173-256)||(14352759-14352842)
chr1 (1-84)||(6822961-6823040)
chr1 (1-84)||(13761783-13761862)
chr1 (1-84)||(15823492-15823571)
chr1 (1-80)||(18307059-18307134)
chr1 (1-84)||(47451594-47451673)
chr1 (1-84)||(6823830-6823910)
chr1 (1-84)||(3579872-3579953)
chr1 (1-81)||(2617465-2617541)
chr1 (256-302)||(10115509-10115555)
chr1 (1-84)||(11457731-11457810)
chr1 (1-76)||(25248770-25248841)
chr1 (1-84)||(25251531-25251610)
chr1 (1-84)||(31423130-31423209)
chr1 (1-84)||(51752311-51752390)
chr1 (2-84)||(16231547-16231625)
chr1 (1-42)||(16428637-16428678)
chr1 (220-272)||(13112047-13112099)
chr1 (4-81)||(14098229-14098302)
chr1 (1-41)||(17318878-17318918)
chr1 (262-329)||(11693686-11693753)
chr1 (1-84)||(16226113-16226192)
chr1 (1-84)||(20291403-20291482)
chr1 (1-84)||(31489861-31489940)
chr1 (1-84)||(50076928-50077007)
chr1 (9-84)||(50079085-50079156)
chr1 (1-46)||(25127852-25127897)
chr1 (14-84)||(49495468-49495534)
chr1 (11-84)||(14183852-14183921)
chr1 (1-41)||(17186384-17186424)
chr1 (1-41)||(18839572-18839612)
chr1 (1-41)||(31425275-31425315)
chr1 (300-339)||(6997388-6997427)
chr1 (11-80)||(26613503-26613571)
chr1 (5-81)||(39462468-39462540)
chr1 (10-119)||(6115344-6115456)
chr1 (1-80)||(10400084-10400159)
chr1 (1-84)||(50248828-50248907)
chr1 (1-84)||(9241342-9241421)
chr1 (1-34)||(46431963-46431996)
chr1 (1-41)||(4131635-4131675)
chr1 (173-256)||(10115572-10115653)
chr1 (11-84)||(18800835-18800904)
chr1 (261-292)||(16855265-16855296)
chr1 (308-339)||(21964366-21964397)
chr1 (11-107)||(42922157-42922249)
chr1 (1-39)||(6756514-6756552)
chr1 (1-35)||(16432396-16432430)
chr1 (57-126)||(16561373-16561441)
chr1 (39-84)||(30790684-30790729)
chr1 (289-329)||(10115466-10115506)
chr1 (86-126)||(10115695-10115735)
chr1 (53-81)||(13449852-13449880)
[»] chr7 (78 HSPs)
chr7 (1-340)||(20625733-20626073)
chr7 (1-340)||(20629624-20629964)
chr7 (1-340)||(20642043-20642383)
chr7 (1-339)||(3035415-3035756)
chr7 (1-339)||(11756925-11757264)
chr7 (1-339)||(7472234-7472574)
chr7 (1-339)||(7092429-7092768)
chr7 (1-339)||(7094676-7095015)
chr7 (1-339)||(7470276-7470621)
chr7 (1-339)||(20299155-20299494)
chr7 (1-339)||(38393683-38394021)
chr7 (1-339)||(7349527-7349867)
chr7 (1-339)||(28485261-28485601)
chr7 (1-342)||(7351906-7352249)
chr7 (1-339)||(18345237-18345576)
chr7 (1-339)||(28487249-28487588)
chr7 (1-339)||(31156165-31156500)
chr7 (1-340)||(37412382-37412717)
chr7 (34-339)||(38395986-38396292)
chr7 (39-339)||(1606171-1606471)
chr7 (1-342)||(21989850-21990185)
chr7 (1-339)||(42331253-42331593)
chr7 (2-339)||(1849665-1850015)
chr7 (70-339)||(21470614-21470883)
chr7 (139-339)||(47865328-47865528)
chr7 (1-331)||(24258166-24258498)
chr7 (1-270)||(13099730-13099996)
chr7 (2-235)||(20297163-20297396)
chr7 (14-340)||(3676996-3677301)
chr7 (1-259)||(43253770-43254035)
chr7 (191-339)||(443326-443474)
chr7 (211-342)||(40281862-40281995)
chr7 (1-81)||(48457608-48457688)
chr7 (1-127)||(443508-443630)
chr7 (1-84)||(27306483-27306562)
chr7 (1-84)||(44520-44599)
chr7 (256-329)||(10690684-10690756)
chr7 (276-329)||(20297108-20297161)
chr7 (1-84)||(9680770-9680854)
chr7 (1-84)||(1049549-1049628)
chr7 (1-84)||(18567569-18567648)
chr7 (1-84)||(31435301-31435380)
chr7 (1-75)||(3878540-3878612)
chr7 (1-84)||(35585-35664)
chr7 (1-84)||(11355214-11355293)
chr7 (1-84)||(21679983-21680062)
chr7 (1-101)||(9678993-9679094)
chr7 (14-84)||(22392429-22392495)
chr7 (1-81)||(40946283-40946363)
chr7 (11-107)||(7188476-7188568)
chr7 (1-84)||(25542487-25542565)
chr7 (256-322)||(12310542-12310608)
chr7 (1-84)||(20137363-20137442)
chr7 (1-84)||(22251796-22251875)
chr7 (285-331)||(43254023-43254069)
chr7 (1-84)||(44724535-44724614)
chr7 (1-84)||(26804529-26804604)
chr7 (3-84)||(21678022-21678099)
chr7 (1-84)||(1047178-1047265)
chr7 (1-84)||(22828887-22828966)
chr7 (1-84)||(40836996-40837075)
chr7 (2-84)||(24748550-24748628)
chr7 (1-84)||(42223112-42223192)
chr7 (1-84)||(4296189-4296269)
chr7 (212-259)||(12484976-12485023)
chr7 (212-259)||(12506407-12506454)
chr7 (1-36)||(38396316-38396351)
chr7 (173-259)||(12310442-12310528)
chr7 (1-84)||(39146241-39146320)
chr7 (1-41)||(21592397-21592437)
chr7 (261-292)||(6628853-6628884)
chr7 (212-259)||(12657600-12657647)
chr7 (261-292)||(12657667-12657698)
chr7 (10-41)||(24465544-24465575)
chr7 (262-292)||(12485044-12485074)
chr7 (262-292)||(12506475-12506505)
chr7 (138-167)||(443461-443490)
chr7 (39-107)||(20091829-20091897)
[»] chr2 (56 HSPs)
chr2 (1-339)||(23452491-23452829)
chr2 (1-339)||(35215840-35216184)
chr2 (1-340)||(35218217-35218566)
chr2 (1-341)||(42452447-42452784)
chr2 (1-339)||(42923763-42924094)
chr2 (57-339)||(27583632-27583907)
chr2 (138-329)||(28568556-28568740)
chr2 (211-342)||(27136369-27136508)
chr2 (244-332)||(34575608-34575696)
chr2 (181-329)||(15693583-15693747)
chr2 (1-84)||(21520947-21521028)
chr2 (1-89)||(6264399-6264483)
chr2 (1-84)||(40032312-40032391)
chr2 (264-329)||(28568346-28568411)
chr2 (1-81)||(5377683-5377763)
chr2 (1-84)||(24162466-24162545)
chr2 (256-329)||(41303549-41303623)
chr2 (188-259)||(39286971-39287042)
chr2 (1-84)||(13910298-13910377)
chr2 (1-84)||(19504599-19504678)
chr2 (1-84)||(22163201-22163280)
chr2 (1-84)||(27104721-27104800)
chr2 (1-84)||(22287590-22287669)
chr2 (1-84)||(22407663-22407742)
chr2 (1-84)||(31733019-31733098)
chr2 (1-84)||(42064437-42064516)
chr2 (2-84)||(6259070-6259148)
chr2 (181-258)||(7502638-7502715)
chr2 (1-84)||(19007562-19007641)
chr2 (1-84)||(19502265-19502344)
chr2 (10-84)||(18800565-18800635)
chr2 (1-41)||(38020163-38020203)
chr2 (261-325)||(39286892-39286952)
chr2 (180-259)||(41303456-41303535)
chr2 (1-84)||(11739814-11739893)
chr2 (9-84)||(17849039-17849110)
chr2 (1-84)||(28196559-28196638)
chr2 (181-259)||(41304807-41304884)
chr2 (1-84)||(43623822-43623901)
chr2 (10-81)||(45280248-45280315)
chr2 (1-83)||(3022086-3022164)
chr2 (138-205)||(34575528-34575588)
chr2 (10-84)||(37963190-37963260)
chr2 (11-84)||(11578368-11578437)
chr2 (275-326)||(7502582-7502633)
chr2 (1-84)||(15539729-15539808)
chr2 (1-84)||(38020065-38020144)
chr2 (256-329)||(41304898-41304964)
chr2 (58-107)||(20147055-20147104)
chr2 (9-84)||(45239238-45239314)
chr2 (10-41)||(22874103-22874134)
chr2 (2-78)||(34979834-34979906)
chr2 (1-84)||(14837195-14837274)
chr2 (11-84)||(12342673-12342743)
chr2 (58-99)||(20146914-20146955)
chr2 (1-41)||(17848404-17848444)
[»] chr4 (90 HSPs)
chr4 (1-339)||(22132644-22132987)
chr4 (1-340)||(24347958-24348297)
chr4 (1-339)||(14787685-14788021)
chr4 (1-340)||(17662488-17662827)
chr4 (1-339)||(22134869-22135219)
chr4 (1-344)||(56030184-56030523)
chr4 (1-339)||(5100743-5101076)
chr4 (1-341)||(44600092-44600430)
chr4 (58-323)||(30136331-30136596)
chr4 (189-342)||(47211158-47211311)
chr4 (1-209)||(53405000-53405209)
chr4 (138-340)||(38890517-38890702)
chr4 (57-339)||(10112626-10112898)
chr4 (139-340)||(9022059-9022252)
chr4 (1-127)||(47210994-47211122)
chr4 (1-127)||(18709417-18709547)
chr4 (11-232)||(19322547-19322766)
chr4 (185-339)||(9863499-9863650)
chr4 (238-337)||(19322410-19322510)
chr4 (1-84)||(37089625-37089707)
chr4 (268-339)||(14789500-14789571)
chr4 (1-84)||(47274727-47274806)
chr4 (1-84)||(36919839-36919920)
chr4 (1-84)||(5637719-5637802)
chr4 (1-84)||(11008820-11008903)
chr4 (256-329)||(38209186-38209259)
chr4 (1-81)||(8631673-8631753)
chr4 (1-84)||(11006491-11006574)
chr4 (1-84)||(5198420-5198499)
chr4 (1-84)||(22802988-22803067)
chr4 (1-84)||(48486319-48486398)
chr4 (186-259)||(54929107-54929180)
chr4 (1-84)||(9148251-9148332)
chr4 (1-84)||(619701-619780)
chr4 (261-323)||(5516771-5516833)
chr4 (1-84)||(11434955-11435034)
chr4 (1-84)||(22801116-22801195)
chr4 (1-84)||(24446833-24446912)
chr4 (1-84)||(24888796-24888875)
chr4 (1-84)||(38409199-38409284)
chr4 (1-84)||(40091669-40091748)
chr4 (1-84)||(36921748-36921828)
chr4 (1-81)||(6764842-6764918)
chr4 (1-81)||(40637077-40637153)
chr4 (1-81)||(52942700-52942777)
chr4 (1-81)||(2485126-2485203)
chr4 (181-259)||(10979676-10979754)
chr4 (1-84)||(18847153-18847232)
chr4 (1-84)||(22044644-22044723)
chr4 (1-84)||(36378292-36378371)
chr4 (1-84)||(51015246-51015325)
chr4 (1-101)||(13543937-13544038)
chr4 (1-84)||(38270240-38270319)
chr4 (1-84)||(7941319-7941400)
chr4 (1-81)||(14633323-14633398)
chr4 (1-84)||(9174400-9174479)
chr4 (1-84)||(9176728-9176807)
chr4 (1-84)||(16934397-16934476)
chr4 (1-84)||(19095882-19095961)
chr4 (1-84)||(22046939-22047018)
chr4 (1-84)||(24878989-24879068)
chr4 (1-84)||(3824824-3824906)
chr4 (256-325)||(29609914-29609983)
chr4 (1-41)||(2891356-2891396)
chr4 (1-41)||(31849853-31849893)
chr4 (1-41)||(37313320-37313360)
chr4 (1-101)||(33415741-33415837)
chr4 (1-81)||(47868404-47868480)
chr4 (1-84)||(12396099-12396178)
chr4 (1-84)||(12401061-12401140)
chr4 (1-84)||(16932043-16932122)
chr4 (1-84)||(22780627-22780714)
chr4 (1-84)||(22782992-22783079)
chr4 (1-84)||(24880451-24880530)
chr4 (1-84)||(38928432-38928511)
chr4 (2-84)||(3937464-3937541)
chr4 (1-41)||(16453348-16453388)
chr4 (258-329)||(54929198-54929267)
chr4 (1-84)||(18409601-18409679)
chr4 (10-101)||(18537733-18537821)
chr4 (39-84)||(8756538-8756583)
chr4 (10-84)||(25357637-25357713)
chr4 (1-82)||(41997494-41997571)
chr4 (211-254)||(5516704-5516747)
chr4 (220-259)||(14647175-14647214)
chr4 (11-107)||(15032800-15032892)
chr4 (197-256)||(29609838-29609897)
chr4 (1-84)||(6132873-6132951)
chr4 (10-84)||(12102090-12102162)
chr4 (57-89)||(28453682-28453714)
[»] scaffold0005 (4 HSPs)
scaffold0005 (1-339)||(51709-52045)
scaffold0005 (268-339)||(50159-50230)
scaffold0005 (1-81)||(183894-183969)
scaffold0005 (220-259)||(170076-170115)
[»] chr6 (49 HSPs)
chr6 (1-339)||(30966923-30967261)
chr6 (1-341)||(30034857-30035198)
chr6 (1-339)||(2629139-2629479)
chr6 (1-339)||(12195769-12196104)
chr6 (1-340)||(19704823-19705166)
chr6 (5-340)||(26932820-26933159)
chr6 (62-340)||(18317750-18318029)
chr6 (138-344)||(5275727-5275933)
chr6 (1-343)||(17852263-17852602)
chr6 (39-337)||(17011781-17012070)
chr6 (57-339)||(22858261-22858536)
chr6 (173-337)||(20526548-20526708)
chr6 (1-84)||(20915610-20915691)
chr6 (1-107)||(15532935-15533036)
chr6 (5-84)||(15541398-15541473)
chr6 (173-317)||(30445243-30445404)
chr6 (1-84)||(4816485-4816578)
chr6 (1-84)||(24338702-24338781)
chr6 (256-329)||(30443022-30443097)
chr6 (1-101)||(3390343-3390439)
chr6 (1-81)||(28241575-28241651)
chr6 (1-84)||(1072131-1072210)
chr6 (1-84)||(8995460-8995539)
chr6 (1-84)||(9019907-9019986)
chr6 (5-84)||(13057175-13057250)
chr6 (1-84)||(14507429-14507508)
chr6 (1-84)||(25477255-25477334)
chr6 (1-84)||(32447570-32447649)
chr6 (1-79)||(14459019-14459093)
chr6 (1-85)||(3632192-3632272)
chr6 (1-84)||(11983283-11983362)
chr6 (1-84)||(19227662-19227741)
chr6 (1-81)||(26064965-26065046)
chr6 (1-81)||(26084934-26085015)
chr6 (1-81)||(1230503-1230579)
chr6 (1-84)||(15530376-15530455)
chr6 (1-84)||(30729082-30729161)
chr6 (11-101)||(15346355-15346441)
chr6 (1-80)||(32279982-32280056)
chr6 (1-84)||(3233985-3234063)
chr6 (1-84)||(3630118-3630197)
chr6 (5-84)||(13039735-13039810)
chr6 (186-259)||(30443111-30443182)
chr6 (282-325)||(12158532-12158575)
chr6 (1-84)||(12161809-12161887)
chr6 (10-41)||(15719674-15719705)
chr6 (1-79)||(13870676-13870749)
chr6 (1-41)||(22490659-22490700)
chr6 (261-305)||(3833176-3833220)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-340)||(11727-12062)
[»] scaffold0511 (1 HSPs)
scaffold0511 (1-340)||(1734-2076)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-339)||(78883-79219)
[»] scaffold0468 (2 HSPs)
scaffold0468 (224-338)||(2070-2184)
scaffold0468 (138-196)||(2022-2080)
[»] scaffold0133 (2 HSPs)
scaffold0133 (191-339)||(4546-4694)
scaffold0133 (39-127)||(4727-4814)
[»] scaffold1674 (1 HSPs)
scaffold1674 (245-339)||(1-95)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-84)||(3952-4031)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-84)||(69545-69628)
scaffold0025 (1-84)||(73277-73360)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-84)||(29116-29205)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-84)||(2835-2914)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-81)||(1085-1161)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-81)||(41737-41813)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-84)||(14974-15053)
scaffold0131 (1-74)||(14636-14707)
[»] scaffold0472 (1 HSPs)
scaffold0472 (2-84)||(6154-6232)
[»] scaffold0008 (2 HSPs)
scaffold0008 (186-256)||(57836-57905)
scaffold0008 (258-329)||(57926-57995)
[»] scaffold0267 (1 HSPs)
scaffold0267 (1-46)||(30-75)
[»] scaffold0004 (1 HSPs)
scaffold0004 (2-84)||(79814-79892)
[»] scaffold0533 (1 HSPs)
scaffold0533 (261-302)||(2232-2273)
[»] scaffold0224 (1 HSPs)
scaffold0224 (11-107)||(16082-16174)
[»] scaffold0474 (1 HSPs)
scaffold0474 (279-329)||(10443-10493)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-30)||(35644-35673)


Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 15809300 - 15808960
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  15809300 gttgttgcctttctaaacccttgtttcagccccctttatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 15809201  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15809200 ttggaacaaataccacactgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 15809101  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15809100 caaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaaca 15809001  T
Q  301 atattctccatccatcaaattttgagtcatactacaacaat 341  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15809000 atattctccatccatcaaattttgagtcatactaaaacaat 15808960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 28283473 - 28283813
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  28283473 gttgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataa 28283572  T
Q  99 atttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    ||||||||| ||||  |||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28283573 atttggaacaaatattacactgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcactttcaaaatatatttgc 28283672  T
Q  199 atcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 298  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28283673 atcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 28283772  T
Q  299 caatattctccatccatcaaattttgagtcatactacaaca 339  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  28283773 aaatattctccatccatcaaattttgagtcatactacaaca 28283813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 3874091 - 3873749
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  3874091 gttgttgtctttctaaacccttgtttcagcccccgctatctctctcaaagtttagcctgatacaaagtctatatttatagtaaaagtataactcataaat 3873992  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    ||||||| |||||||||| |||||||             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3873991 ttggaacaaataccacaccgaagatatgtttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 3873892  T
Q  199 atcaaatcgtta-ttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 297  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3873891 atcaaatcgtttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 3873792  T
Q  298 acaatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3873791 acaatattctccatccatcaaattttgagtcatactacaacaa 3873749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 43530209 - 43529871
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||  ||||||||||||||    
T  43530209 gttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataaat 43530110  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||  |||||||||||||||||||          ||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  43530109 ttggaataaataccacactgaagatacttttttttttctccttcagtgaaagaatattagcataaaaaatataatattccctttcaaaatatatttgcat 43530010  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43530009 caaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 43529910  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43529909 atattctccatccatcaaattttgagtcatactacaaca 43529871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 41384825 - 41384493
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | |||||||||||||||||||||||     ||||||||||  ||||   |||| ||||||||||||||||||||||  ||||||||||||||    
T  41384825 gttgttgtcattctaaacccttgtttcagcccc-----tctatctcaatttttactttgattcaaggtctatatttatagtaaaagtataactcataaat 41384731  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    |||||||||||||||||||||||||||           ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  41384730 ttggaacgaataccacactgaagatacgtttttttttttccttcaatgaaagaatatttgcat-aaaaatataatattccctttcaaaatatatttgcat 41384632  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||    
T  41384631 caaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatatttttagcaaca 41384532  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41384531 atattctccatccatcaaattttgagtcatactacaaca 41384493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 41382754 - 41382420
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | |||||||||||||||| ||||||    ||||||||||| |||||  ||||| ||||||||||||||||||||||  ||||||||||||||    
T  41382754 gttgttgtcattctaaacccttgttttagcccc----atctatctcaaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaat 41382659  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    |||||||||||||||||||||||||||           ||| |||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  41382658 ttggaacgaataccacactgaagatacgttttttttttctcattcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaatatatttgca 41382559  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||    
T  41382558 tcaaatcgttgttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatatttttaacaac 41382459  T
Q  300 aatattctccatccatcaaattttgagtcatactacaac 338  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41382458 aatattctccatccatcaaattttgagtcatactacaac 41382420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 608815 - 608470
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc----aaagtttagcctgatacaaggtctatatttatagtaaacatataactcat 96  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    |||||||    ||||| |||||||||||||| ||| || |||||||||||    
T  608815 gttgttgcatttctaaacccttgtttcagccccctctatctctctctctcaaagtttgctatgatataaggtctatatttacagtgaa-atataactcat 608717  T
Q  97 aaatttggaacgaataccacactgaagatacnnnnnnnnnn----ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatat 192  Q
    ||||||||||| |||| ||||| ||||||||              |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  608716 aaatttggaacaaatatcacaccgaagatacgttcttttttttttctccttcagtgaaagaatatttgcataaaatatataatattctctttcaaaatat 608617  T
Q  193 atttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 292  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  608616 atttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 608517  T
Q  293 tagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||| | ||||||||||||||||| |||||||||||    
T  608516 tagcaacaatattcttcttccatcaaattttgagtgatactacaaca 608470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 180 - 339
Target Start/End: Complemental strand, 32339253 - 32339094
Alignment:
Q  180 tctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaa 279  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32339253 tctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaa 32339154  T
Q  280 tcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32339153 tcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 32339094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 222 - 339
Target Start/End: Original strand, 3265635 - 3265752
Alignment:
Q  222 caaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatt 321  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3265635 caaacatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatt 3265734  T
Q  322 ttgagtcatactacaaca 339  Q
    ||||||||||||||||||    
T  3265735 ttgagtcatactacaaca 3265752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 32339390 - 32339264
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  32339390 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 32339291  T
Q  101 ttggaacgaataccacactgaagatac 127  Q
    ||||||| |||||||||||||||||||    
T  32339290 ttggaacaaataccacactgaagatac 32339264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 2 - 188
Target Start/End: Complemental strand, 181617 - 181434
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatt 101  Q
    |||||||| |||||| ||||||||||||||||||||||||    |||||||||| ||||||||| ||||||||||||||||||  |||||||||||||||    
T  181617 ttgttgccattctaagcccttgtttcagccccctctatct----caaagtttagtctgatacaaagtctatatttatagtaaaagtataactcataaatt 181522  T
Q  102 tggaacgaataccacactgaagatac-nnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaa 188  Q
    ||||||||||||||||||||||||||           |||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  181521 tggaacgaataccacactgaagatacgtttttttcttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 181434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 24873435 - 24873563
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  24873435 gttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataa 24873534  T
Q  99 atttggaacgaataccacactgaagatac 127  Q
    ||||||||| ||||| |||||||||||||    
T  24873535 atttggaacaaatacaacactgaagatac 24873563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15072791 - 15072712
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||||||    
T  15072791 gttgttgcctttctaaacccttgtttcagccccctctatct----caaagtttagtctgatacaaggtctatatttatagtaaa 15072712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 14419446 - 14419541
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatt 101  Q
    |||||||||||||||||||||||||||||||||    |||||||||| |||||  ||||||||| ||||||||||||||||||  ||| |||||||||||    
T  14419446 ttgttgcctttctaaacccttgtttcagccccc----tctatctcaaggtttacactgatacaatgtctatatttatagtaaaagtatcactcataaatt 14419541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14807832 - 14807753
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||   ||||||||||||||||||||||||||||    
T  14807832 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaagtttgctctgatacaaggtctatatttatagtaaa 14807753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12517278 - 12517359
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||   |||||||||||| ||||| |||||||||    
T  12517278 gttgttgcctttctaaacccttgtttcagccccctctatc--tctcaaagtttgctctgatacaaggtatatatatatagtaaa 12517359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3886172 - 3886251
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||   ||||||||| ||||||||||||||||||    
T  3886172 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaagtttgctctgatacaaagtctatatttatagtaaa 3886251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15068062 - 15067983
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||     |||||||||||||||||  ||||||||||| |||||||||||||||    
T  15068062 gttgttgcctttctaaacccttgtttcagcccc----ttctatctcaaagtttaggttgatacaaggtttatatttatagtaaa 15067983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 27107151 - 27107230
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  27107151 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaggtttatactgatacaatgtctatatttatagtaaa 27107230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 33541642 - 33541721
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  33541642 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaatgtttacactgatacaatgtctatatttatagtaaa 33541721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 35872632 - 35872711
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  35872632 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaggtttacactgatacaatgtctatatttatagtaaa 35872711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 13858738 - 13858834
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||||||||||||||||||||||| |||||    |||||||||| |||||  ||||||||| ||||||||||||||||||  |||  |||||||||    
T  13858738 gttgttgcctttctaaacccttgtttcatccccc----tctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaat 13858833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 13986304 - 13986374
Alignment:
Q  258 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    |||||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||| |||||||||||||    
T  13986304 cacaaaatatatttaaaacaaatcttt-atatttttagcaacaatcttcttcatccataaaattttgagtca 13986374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4424099 - 4424020
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||| |||||||||||||||||||    ||||||||||||   |||||||||||||| |||||||||||||    
T  4424099 gttgttgcctttctaaatccttgtttcagccccctct----atctcaaagtttgctctgatacaaggtctgtatttatagtaaa 4424020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18810789 - 18810710
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   |||||||||| |||||||||||||||||    
T  18810789 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaagatctatatttatagtaaa 18810710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 27827067 - 27826988
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   ||||||||||| ||||||||||||||||    
T  27827067 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaaggcctatatttatagtaaa 27826988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 27829378 - 27829299
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   ||||||||||| ||||||||||||||||    
T  27829378 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaaggcctatatttatagtaaa 27829299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 44720924 - 44720845
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||||    ||||| |||||||||||||||||||||    
T  44720924 gttgttgcctttctaaacccttgtttcagccccctctatct----caaagtttgctttgatataaggtctatatttatagtaaa 44720845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5622992 - 5623088
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||    |||||||||| |||||  |||||||||   ||||||||||||||||   || ||||||||||    
T  5622992 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaggtttattctgatacaaaacctatatttatagtaaaagaatcactcataaat 5623087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 30679186 - 30679256
Alignment:
Q  258 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    |||||||||||| | ||||||||||||| |||||||| |||| ||||||| |||||||||||||||||||||    
T  30679186 cacaaaatatatctaaaacaaatcttttttatttttaccaac-atattcttcatccatcaaattttgagtca 30679256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 1225247 - 1225168
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| |||||||||||||||||||||||||||||    ||||||| |||||  ||||||||| | ||||||||||||||||    
T  1225247 gttgttgtctttctaaacccttgtttcagccccctct----atctcaaggtttacactgatacaatgcctatatttatagtaaa 1225168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18812974 - 18812895
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||| |||||||||    | ||||||   |||||||||| |||||||||||||||||    
T  18812974 gttgttgcctttctaaacccttgtttcagcctcctctatct----ccaagtttgctctgatacaagatctatatttatagtaaa 18812895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26775282 - 26775203
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    ||| ||||   ||||||||| | ||||||||||||||||    
T  26775282 gttgttgcctttctaaacccttgtttcagccccctctatct----caaggtttgctctgatacaaagcctatatttatagtaaa 26775203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 28251821 - 28251900
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| |||||||||||||||||| ||| |||||    ||||||||||||   |||||||||||||||||||||||||||    
T  28251821 gttgttgccattctaaacccttgtttcaacccactcta----tctcaaagtttactatgatacaaggtctatatttatagtaaa 28251900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36865619 - 36865579
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36865619 gttgttgcctttctaaacccttgtttcagccccctctatct 36865579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37214464 - 37214504
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37214464 gttgttgcctttctaaacccttgtttcagccccctctatct 37214504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5372432 - 5372510
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||     ||||||||||  ||||  ||||||||| ||||||| ||||||||||    
T  5372432 gttgttgcctttctaaacccttgtttcagcccc-----tctatctcaagatttacactgatacaatgtctataattatagtaaa 5372510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22684910 - 22684996
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctcta------tctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||| ||||||||||||||||||||||| ||||||      ||| |||||||||||   |||||||||||||||||||||||||    
T  22684910 gttgttgtctttctaaacccttgtttcagcctcctctatctctctctctctcaaagtttgctctgatacaaggtctatatttatagt 22684996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 25952601 - 25952562
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25952601 ttgttgcctttctaaacccttgtttcagccccctctatct 25952562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14477357 - 14477278
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||| ||||||||||||    ||| ||||   ||||||||| | ||||||||||||||||    
T  14477357 gttgttgcctttctaaacccttgtttcaaccccctctatct----caaggtttgctctgatacaaagcctatatttatagtaaa 14477278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30480757 - 30480836
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||| ||||     |||||||||| |||||  || |||||| ||||||||||||||||||    
T  30480757 gttgttgcctttctaaacccttgtttcaacccc----ttctatctcaaggtttacactaatacaatgtctatatttatagtaaa 30480836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 2468361 - 2468431
Alignment:
Q  10 tttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| |||||||||||| |||||||    ||||||||||||   |||||||||||||||||||||||||||    
T  2468361 tttctaaatccttgtttcagctccctcta----tctcaaagtttactttgatacaaggtctatatttatagtaaa 2468431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43082054 - 43082009
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc 46  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  43082054 gttgttgcttttctaaacccttgtttcagccccctctatctctctc 43082009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 259
Target Start/End: Original strand, 11701364 - 11701447
Alignment:
Q  173 aatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    ||||||| |||| ||||||||||| |||||| || |    |||||| |||||||||||||||| || ||||||||||||||||||||    
T  11701364 aatattccctttaaaaatatatttacatcaattcttc---catacggtacaaaaatatatttactgaccataaatatattttcagca 11701447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 13986214 - 13986285
Alignment:
Q  185 caaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttca 256  Q
    |||||||||||||||||||||| |  ||||| || ||||||||| |||| | | ||||||||||||||||||    
T  13986214 caaaatatatttgcatcaaatcttctttcatgcggtacaaaaatttattaactatccataaatatattttca 13986285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 21482394 - 21482324
Alignment:
Q  10 tttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||| || |    ||||||||||||||||  |||||||||  |||||||||||||||||    
T  21482394 tttctaaacccttgtttcagtccac----tctatctcaaagtttactctgatacaaattctatatttatagtaaa 21482324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27911095 - 27911056
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  27911095 gttgttgcctt-ctaaacccttgtttcagccccctctatct 27911056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27957514 - 27957475
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  27957514 gttgttgcctt-ctaaacccttgtttcagccccctctatct 27957475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 84
Target Start/End: Complemental strand, 43081991 - 43081960
Alignment:
Q  53 tagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||    
T  43081991 tagcctgatacaaggtctatatttatagtaaa 43081960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 14419780 - 14419826
Alignment:
Q  34 ctctatctatctcaaagtttagcctgatacaaggtctatatttatag 80  Q
    |||| |||||||||| ||||| |||||||||| ||||||||||||||    
T  14419780 ctctctctatctcaaggtttaccctgatacaatgtctatatttatag 14419826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 6376032 - 6375991
Alignment:
Q  43 tctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||| |||||  ||||||||||||||||||||||||||||    
T  6376032 tctcaatgtttactctgatacaaggtctatatttatagtaaa 6375991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 15185972 - 15186066
Alignment:
Q  9 ctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaac 107  Q
    ||||||||||||||||||||| | ||    | |||||||| |||||  ||||||||| || |||||||||||||||  |||  |||||||| |||||||    
T  15185972 ctttctaaacccttgtttcagtcacc----tttatctcaaggtttactctgatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 15186066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 287
Target Start/End: Original strand, 27820149 - 27820178
Alignment:
Q  258 cacaaaatatatttgaaacaaatcttttat 287  Q
    ||||||||||||||||||||||||||||||    
T  27820149 cacaaaatatatttgaaacaaatcttttat 27820178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 31162241 - 31162192
Alignment:
Q  58 tgatacaaggtctatatttatagtaaacatataactcataaatttggaac 107  Q
    |||||||||||||||||||||||||||  |||  |||||||| |||||||    
T  31162241 tgatacaaggtctatatttatagtaaaagtatccctcataaaattggaac 31162192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43079683 - 43079650
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccc 34  Q
    |||||||| |||||||||||||||||||||||||    
T  43079683 gttgttgcttttctaaacccttgtttcagccccc 43079650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 11701435 - 11701479
Alignment:
Q  285 tatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    |||||||| ||||||||| |||| | |||||||||||||||||||    
T  11701435 tatattttcagcaacaatcttcttcgtccatcaaattttgagtca 11701479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 31035096 - 31035064
Alignment:
Q  57 ctgatacaaggtctatatttatagtaaacatat 89  Q
    |||||||||||||||||||||||||||| ||||    
T  31035096 ctgatacaaggtctatatttatagtaaaaatat 31035064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 273; Significance: 1e-152; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 18469036 - 18468698
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||  ||||||||||||||    
T  18469036 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttatcatgatacaaggtctatatttatagtaaaagtataactcataaat 18468937  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18468936 ttggaacaaataccacactgaagatactttttattttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 18468837  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18468836 caaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaaa 18468737  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18468736 atattctccatccatcaaattttgagtcatactacaaca 18468698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 27912561 - 27912219
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  27912561 gttgttgcctttctaaacccttgtttcagcaccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataa 27912462  T
Q  99 atttggaacgaataccacactgaagatacnnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 196  Q
    ||||||||| |||| ||||||||||||||            |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27912461 atttggaacaaatatcacactgaagatacgtttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatattt 27912362  T
Q  197 gcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagc 296  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27912361 gcatcaaatcgtttttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagc 27912262  T
Q  297 aacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27912261 aacaatattctccatccatcaaattttgagtcatactacaaca 27912219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 342
Target Start/End: Original strand, 18511466 - 18511805
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | |||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  18511466 gttgttgtcattctaaacccttgtttcagccccctctatct--ctcaaagtttagtctgatacaaggtctatatttatattaaacatataactcataaat 18511563  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||||||||||||||| |||||||          |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  18511564 ttggaacgaataccacactaaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatatttcctttcaaaatatatttgcat 18511663  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18511664 caaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaacaaatcttttatatttttagcaaca 18511763  T
Q  301 atattctccatccatcaaattttgagtcatactacaacaata 342  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  18511764 atattcttcatccatcaaattttgagtcatactacaaaaata 18511805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 25804050 - 25803707
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctca-----aagtttagcctgatacaaggtctatatttatagtaaacatataactca 95  Q
    ||||||||| |||||||||||||||| |||||||||||||| ||||      || ||||||||||||||||||||||||||||||||||  |||||||||    
T  25804050 gttgttgccattctaaacccttgtttgagccccctctatctctctctctctcaaatttagcctgatacaaggtctatatttatagtaaaagtataactca 25803951  T
Q  96 taaatttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatt 195  Q
    |||||||||||| ||||  |||||||||||||          |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25803950 taaatttggaacaaatattacactgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatt 25803851  T
Q  196 tgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttag 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25803850 tgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttag 25803751  T
Q  296 caacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25803750 caacaatattctccatccatcaaattttgagtcatactacaaca 25803707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 18509572 - 18509904
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | ||||||||||||||||||||||| |||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18509572 gttgttgtcattctaaacccttgtttcagcccc-tctatct--ctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaat 18509668  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    |||| | ||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18509669 ttgggatgaataccacactgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 18509768  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  18509769 caaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaataaatcttttatatttttagcaaca 18509868  T
Q  301 atattctccatccatcaaattttgagtcatactaca 336  Q
    ||||||||||||||||||||||||||||||||||||    
T  18509869 atattctccatccatcaaattttgagtcatactaca 18509904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 10586867 - 10586549
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  10586867 gttgttgccattctaaacccttgtttcagcccc-tctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 10586769  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    ||||||| |||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10586768 ttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 10586669  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10586668 tcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 10586569  T
Q  300 aatattctccatccatcaaa 319  Q
    ||||||| ||||||||||||    
T  10586568 aatattccccatccatcaaa 10586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 27910475 - 27910135
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    |||||||||||| |||||| |||||||||||||| |||||| ||||  |||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  27910475 gttgttgcctttttaaacc-ttgtttcagcccccgctatctctctctcaaagtttaacctgatacaaggtctatatttatagtaaaagtataactcataa 27910377  T
Q  99 atttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttg 197  Q
    ||||||||| |||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27910376 atttggaacaaataccacactgaagatactttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 27910277  T
Q  198 catcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 297  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27910276 catcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 27910177  T
Q  298 acaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    | ||||||||||||||||||||||||||||||||||||||||    
T  27910176 ataatattctccatccatcaaattttgagtcatactacaaca 27910135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 15552270 - 15551925
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc------aaagtttagcctgatacaaggtctatatttatagtaaacatataactc 94  Q
    |||||||| |||||||||||||||||||| ||||||||||| ||||      ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  15552270 gttgttgcttttctaaacccttgtttcagtcccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactc 15552171  T
Q  95 ataaatttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatata 193  Q
    ||||||||||||| |||||||| ||||||||||           ||||||||||||||||||||||||||||||||| | |||||| |||||||||||||    
T  15552170 ataaatttggaacaaataccacgctgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatgtcatattccctttcaaaatata 15552071  T
Q  194 tttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 293  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  15552070 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatcttttatattttt 15551971  T
Q  294 agcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15551970 agcaacaatattctccatccatcaaattttgagtcatactacaaca 15551925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 26097758 - 26097421
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||| ||||||||| || ||||||||||||||||||    |||||||||  ||||| ||||||||||||||||||||||  ||||||||||||||    
T  26097758 gttgttgccattctaaacctttatttcagccccctctatct----caaagtttactctgattcaaggtctatatttatagtaaaagtataactcataaat 26097663  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnc-tccttcagtgaaagaatatttgcatcaaaaatataatattctctt--tcaaaatatatttg 197  Q
    |||||||||||||||||||||||||||          | |||||||||||||||||||||||||||||||||||| |||  |||  ||||||||||||||    
T  26097662 ttggaacgaataccacactgaagatacatttttttttcctccttcagtgaaagaatatttgcatcaaaaatataacatttccttcttcaaaatatatttg 26097563  T
Q  198 catcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 297  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  26097562 catcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtacaaaatatatttgaaacaaattttttatatttttagca 26097463  T
Q  298 acaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26097462 acaatattctccatccatcaaattttgagtcatactacaaca 26097421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 58 - 339
Target Start/End: Original strand, 3373348 - 3373630
Alignment:
Q  58 tgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaata 156  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||           |||||||||||||| ||||    
T  3373348 tgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaaaaata 3373447  T
Q  157 tttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttca 256  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3373448 tttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttca 3373547  T
Q  257 gcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3373548 gcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattctgagtcatactacaaca 3373630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 26098506 - 26098841
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatt 101  Q
    |||||||| |||||||||||| ||||||||||||||||||    | | |||||  ||||| ||||||||||||||||||||||  ||||||||||||| |    
T  26098506 ttgttgccattctaaacccttatttcagccccctctatct----ccaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaaat 26098601  T
Q  102 tggaacgaataccacactgaagatacnnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    |||||||||||||||| |||||||||            |||||||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  26098602 tggaacgaataccacattgaagatacgtttttttatttctccttcaatgaaagaatttttgtatcaaaaatataatattccctttcaaaatatatttgca 26098701  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  26098702 tcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaat 26098801  T
Q  300 aatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26098802 aatattctccatccatcaaattttgagtcatactacaaca 26098841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 18466709 - 18466453
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18466709 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaaatataactcataaat 18466610  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||| |||||||||||||||||||          |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18466609 ttggaacaaataccacactgaagatac--ttttttttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 18466512  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18466511 caaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagca 18466453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 17 - 343
Target Start/End: Complemental strand, 18596656 - 18596322
Alignment:
Q  17 acccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccac 116  Q
    ||||||||||||||||||||||||     ||| |||||  ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  18596656 acccttgtttcagccccctctatcc----caaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacgaataccac 18596561  T
Q  117 actgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcat 215  Q
    |||||||||||           |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  18596560 actgaagatacgttttttttttctccttcagtgatagaatatttgtatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttctttat 18596461  T
Q  216 acgatacaaaaatatatttat-----------tgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatat 304  Q
    ||| |||||||||||||||||           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18596460 acggtacaaaaatatatttatggtatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatat 18596361  T
Q  305 tctccatccatcaaattttgagtcatactacaacaatat 343  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  18596360 tctccatccatcaaattttgagtcatagtacaacaatat 18596322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 156 - 341
Target Start/End: Complemental strand, 21288713 - 21288527
Alignment:
Q  156 atttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgataca-aaaatatatttattgtccataaatatatttt 254  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| |||  |||||||||||||||||||||||||||||||    
T  21288713 atttgcatcaaaaatataatattccctttcaaaatatatttgcataaaatcgttcttcatacggtaccgaaaatatatttattgtccataaatatatttt 21288614  T
Q  255 cagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacaat 341  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21288613 cagcacaaaatatattttaaacaaatcttttttatttttagcaacaatattctccatccatcaaattttgagttatactacaacaat 21288527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 187 - 332
Target Start/End: Original strand, 17415748 - 17415893
Alignment:
Q  187 aaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatctttta 286  Q
    |||||||||||||||||||  |  |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17415748 aaatatatttgcatcaaattttccttcatacagtacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatctttta 17415847  T
Q  287 tatttttagcaacaatattctccatccatcaaattttgagtcatac 332  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  17415848 tatttttagcaacaatattcttcatccatcaaattttgagtcatac 17415893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 235 - 340
Target Start/End: Original strand, 6661929 - 6662034
Alignment:
Q  235 attgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatacta 334  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||| ||||||||||    
T  6661929 attgtccataaatatattttcaacacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaagttttaagtcatacta 6662028  T
Q  335 caacaa 340  Q
    ||||||    
T  6662029 caacaa 6662034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 40221361 - 40221282
Alignment:
Q  260 caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||    
T  40221361 caaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatcaattaaattttgagtcatactacaaca 40221282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 57 - 259
Target Start/End: Complemental strand, 15143460 - 15143262
Alignment:
Q  57 ctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacnnnnnnnnnn----ctccttcagtgaaag 152  Q
    ||||||||||||||||||||||||  || |||||||||||||||||| |||| ||| ||| ||||||||||              || ||||||||||||    
T  15143460 ctgatacaaggtctatatttatagagaa-atataactcataaatttgtaacggatatcacgctgaagatacgtttcttttttccccttcttcagtgaaag 15143362  T
Q  153 aatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatatt 252  Q
    |||||||||||||||       ||||| |||||||||||||||||||||||||| |  |||||| | ||||||||| |||||||||||||||||||||||    
T  15143361 aatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaatcttccttcatatggtacaaaaatgtatttattgtccataaatatatt 15143269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4410086 - 4410006
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||    
T  4410086 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagt 4410006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21684705 - 21684794
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc------aaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||      ||||||||||||||||||||||||||||||||||||||    
T  21684705 gttgttgcctttttaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaa 21684794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 40221547 - 40221340
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||    ||| |||||  ||||  ||| ||||||||||||||||||  ||  ||||||||||    
T  40221547 gttgttgccattctaaacccttgtttcagccccctctatct----caaggtttactctgagtcaatgtctatatttatagtaaaagta--actcataaat 40221454  T
Q  101 ttggaacgaataccacactgaagatac--------nnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatat 192  Q
    || ||||| ||| ||||||||||||||                  ||||| ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  40221453 ttagaacggatatcacactgaagatacgttttttgttttttccttctcctgcagtgaaagaatatttgcatcaaaaatataatattccttttcaaaatat 40221354  T
Q  193 atttgcatcaaatc 206  Q
    ||||| | ||||||    
T  40221353 atttgaaacaaatc 40221340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1189863 - 1189947
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagttta-gcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||| |||||   ||||||||||||||||||||||||||||    
T  1189863 gttgttgcctttctaaactcttgtttcagccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagtaaa 1189947  T

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Target: chr5; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 41585970 - 41586082
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaa 110  Q
    ||||||||||||||||||||||||| |||||    ||| |||||  |||||||||   ||||||||||||||||  ||||||||||| ||||||||||||    
T  41585970 ttctaaacccttgtttcagccccctttatct----caaggtttactctgatacaaaacctatatttatagtaaaagtataactcatagatttggaacgaa 41586065  T
Q  111 taccacactgaagatac 127  Q
    ||||| |||||||||||    
T  41586066 taccagactgaagatac 41586082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2818590 - 2818669
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||| |||||||||||||||||||||||||||||||    ||||||||||||  ||||||||||||||||||||||||||||    
T  2818590 gttgttacctttctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaaggtctatatttatagtaaa 2818669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 339
Target Start/End: Complemental strand, 18466465 - 18466411
Alignment:
Q  285 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18466465 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 18466411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 5779144 - 5779217
Alignment:
Q  256 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| |||||||||| |||||    
T  5779144 agcacaaaatatatttgaaacaaatcttttatatttttagcaataatcttcttcatctatcaaattttaagtca 5779217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 20507717 - 20507795
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||    ||||||||||||||||  |||||||||| |||||||||||||||||    
T  20507717 ttgttgcctttctaaacccttgtttcagccccc----tctatctcaaagtttactctgatacaagatctatatttatagtaaa 20507795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 285 - 340
Target Start/End: Complemental strand, 15143274 - 15143219
Alignment:
Q  285 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15143274 tatatttttagcaacaatattctccatccatcaaattttgagtcatactataacaa 15143219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25921727 - 25921806
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| ||||||||||||||||||||||||||    |||||||||||||||   ||||||||||||||||||||||||||||    
T  25921727 gttgttgtctttctaaacccttgtttcagccccc----tctatctcaaagtttgctctgatacaaggtctatatttatagtaaa 25921806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 31542760 - 31542681
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||||    |||||||||||||||||||||||||||    
T  31542760 gttgttgcctttctaaacccttgtttcagccccctctatct----caaagtttgctttgatacaaggtctatatttatagtaaa 31542681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 6661446 - 6661555
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaa 110  Q
    |||||||||||||||||| ||| ||||||||    ||| |||||  ||||||||||||||||||||||||| || |||||||||||||||||| |||| |    
T  6661446 ttctaaacccttgtttcaaccctctctatct----caaggtttactctgatacaaggtctatatttatagtgaa-atataactcataaatttgaaacgga 6661540  T
Q  111 taccacactgaagat 125  Q
    ||  |||||||||||    
T  6661541 tataacactgaagat 6661555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 38882131 - 38882051
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||| ||||||   ||||||||||||||||||||||||||||    
T  38882131 gttgttgcctttctaaacccttgtttcagccccc---ctctatctccaagtttgctctgatacaaggtctatatttatagtaaa 38882051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39854508 - 39854433
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||||||||||||||||||||||||||||     |||||||||||||||   |||||||||||||||||||||||||    
T  39854508 gttgttgcctttctaaacccttgtttcagcccc-----tctatctcaaagtttgctctgatacaaggtctatatttatagt 39854433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 21948051 - 21947973
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| |||||||||||||||||||||||||     ||||||||||| ||||  ||||||||||||||||||||||||||||    
T  21948051 gttgttgtctttctaaacccttgtttcagcccc-----tctatctcaaaatttactctgatacaaggtctatatttatagtaaa 21947973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12556177 - 12556256
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| | |||||||||||| |||||||||||||||    ||||||||||||  ||||||||||||||||||||||||||||    
T  12556177 gttgttgtcattctaaacccttatttcagccccctcta----tctcaaagtttactctgatacaaggtctatatttatagtaaa 12556256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17072908 - 17072829
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| |||||||||||||||||||||||||||||    ||||||| |||||  ||||||||| ||||||||||||||||||    
T  17072908 gttgttgtctttctaaacccttgtttcagccccctct----atctcaaggtttacactgatacaatgtctatatttatagtaaa 17072829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25904128 - 25904049
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| |||||||||||||||||||||||||||||    ||||||| |||||  ||||||||| ||||||||||||||||||    
T  25904128 gttgttgtctttctaaacccttgtttcagccccctct----atctcaaggtttacactgatacaatgtctatatttatagtaaa 25904049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 31545105 - 31545026
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||| |||||    ||||||||    |||||||||||||||||||||||||||    
T  31545105 gttgttgcctttctaaacccttgtttcagccccctttatct----caaagtttgctttgatacaaggtctatatttatagtaaa 31545026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10529353 - 10529429
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||||||||||||||||||||||| ||| |    |||||||||||||||   |||||||||||||||||||||||||    
T  10529353 gttgttgcctttctaaacccttgtttcaacccac----tctatctcaaagtttgctctgatacaaggtctatatttatagt 10529429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2174944 - 2174865
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   ||||||||||| || |||||||||||||    
T  2174944 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaaggcctgtatttatagtaaa 2174865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4236654 - 4236575
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||| |||||||||||||||| |||||    | ||||||   ||||||||||||||||||||||||||||    
T  4236654 gttgttgcctttctaaactcttgtttcagccccctttatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 4236575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31179625 - 31179704
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||| ||||||||||    ||||||||    |||||||| ||||||||||||||||||    
T  31179625 gttgttgcctttctaaacccttgtttcagctccctctatct----caaagtttgctttgatacaatgtctatatttatagtaaa 31179704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10474577 - 10474655
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaa 83  Q
    ||||||||||||||||| ||||||||||||||||||||| |    ||| |||||  ||||||||| |||||||||||||||||    
T  10474577 gttgttgcctttctaaatccttgtttcagccccctctattt----caaggtttacactgatacaatgtctatatttatagtaa 10474655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34477308 - 34477353
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  34477308 gttgttgcctttctaaacccttgtttcagccccctctatctctctc 34477353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34479673 - 34479718
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  34479673 gttgttgcctttctaaacccttgtttcagccccctctatctctctc 34479718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6756519 - 6756419
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||| |||||||||| |||    ||||||||||||||||   ||||||||| |||||||| ||||||||  ||||||| | ||||    
T  6756519 gttgttgcctttctaaaccattgtttcagctccc----tctatctcaaagtttaatatgatacaagatctatattaatagtaaaagtataactta-aaat 6756425  T
Q  101 ttggaa 106  Q
    ||||||    
T  6756424 ttggaa 6756419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16092454 - 16092537
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagttta-gcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||| |||||||||||| || | |||||||   ||||||||| |||||||||| |||||||    
T  16092454 gttgttgcctttctaaacccttgtttcaaccccctctatctctcac-aagtttacatctgatacaaagtctatatttctagtaaa 16092537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 36402592 - 36402661
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||    |||||||||| |||||  |||||| |||||||||||||||||||||    
T  36402592 ttctaaacccttgtttcagccccc----tctatctcaacgtttactctgatataaggtctatatttatagtaaa 36402661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16776183 - 16776103
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctata-tttatagtaaa 84  Q
    |||||||||||| ||||||||||||||||||||||||||||    ||||||||   | ||||||||||||||| |||||||||||    
T  16776183 gttgttgcctttgtaaacccttgtttcagccccctctatct----caaagtttgctcagatacaaggtctatattttatagtaaa 16776103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 31466268 - 31466311
Alignment:
Q  41 tatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  31466268 tatctcaaagtttagtctgatacaaggtctatatttatagtaaa 31466311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 24126881 - 24126802
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| |||||||||| ||||||||||||||    ||||||||||| |||||  |||||| || ||||||||||||||||||    
T  24126881 gttgttgtctttctaaactcttgtttcagcccc----atctatctcaaggtttacactgatataatgtctatatttatagtaaa 24126802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31472867 - 31472946
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||| |||||||    |||||||||| |||||  || |||||| ||| ||||||||||||||    
T  31472867 gttgttgcctttctaaacccttgttttagccccc----tctatctcaaggtttacactaatacaatgtccatatttatagtaaa 31472946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 36208597 - 36208526
Alignment:
Q  10 tttctaaacccttgttt-cagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||| |||||||||||||||    ||| |||||  ||||||||||||||||||||||||||||    
T  36208597 tttctaaacccttgttttcagccccctctatct----caaggtttactctgatacaaggtctatatttatagtaaa 36208526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6747331 - 6747253
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||| |||||||||||||||||||||||||||||||| | ||    |||   |||||||||||||||||||||||||    
T  6747331 gttgttgcttttctaaacccttgtttcagccccctctatctctttc--tctttgctctgatacaaggtctatatttatagt 6747253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20043075 - 20043035
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  20043075 gttgttgcctttctaaacacttgtttcagccccctctatct 20043035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 37706037 - 37706109
Alignment:
Q  4 gttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatag 80  Q
    |||||||||||||||| || |||||||||||    |||||||||| |||||  ||||||||| ||||||||||||||    
T  37706037 gttgcctttctaaacctttatttcagccccc----tctatctcaaggtttacactgatacaatgtctatatttatag 37706109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 39398247 - 39398325
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||     |||||||||| |||||  | | ||||| || |||||||||||||||    
T  39398247 gttgttgcctttctaaacccttgtttcagcccc-----tctatctcaaggtttacaccggtacaatgtttatatttatagtaaa 39398325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 695914 - 695835
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||| |||||    | |||||||| |||||  || |||||| ||||||||| ||||||||    
T  695914 gttgttgcctttctaaacccttgtttcatccccc----tttatctcaaggtttacactcatacaatgtctatattcatagtaaa 695835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 17818744 - 17818817
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttata 79  Q
    |||||||||||||||||| ||||||||||||||     ||| |||||| |||||  ||||||||| |||||||||||||    
T  17818744 gttgttgcctttctaaactcttgtttcagcccc-----tctttctcaaggtttacactgatacaatgtctatatttata 17818817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 34530920 - 34530999
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||| |||||||||||||||    |||||||||| |||||  ||||| ||| ||||||||||| ||||||    
T  34530920 gttgttgcatttctaaacacttgtttcagccccc----tctatctcaaggtttactctgattcaaagtctatatttacagtaaa 34530999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 2532750 - 2532784
Alignment:
Q  258 cacaaaatatatttgaaacaaatcttttatatttt 292  Q
    ||||| |||||||||||||||||||||||||||||    
T  2532750 cacaagatatatttgaaacaaatcttttatatttt 2532784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20045035 - 20044956
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| || ||||||||||||||||||||||||| |||    ||| ||||   ||||||||| | ||||||||||||||||    
T  20045035 gttgttgctttcctaaacccttgtttcagccccctctgtct----caaggtttgctctgatacaaagcctatatttatagtaaa 20044956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 2723958 - 2723913
Alignment:
Q  39 tctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  2723958 tctatctcaaggtttacactgatacaatgtctatatttatagtaaa 2723913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6745094 - 6745049
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc 46  Q
    |||||||| ||||||||| |||||||||||||||| ||||| ||||    
T  6745094 gttgttgcttttctaaacacttgtttcagccccctttatctctctc 6745049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 32520316 - 32520241
Alignment:
Q  186 aaaatatatttgcatcaaatcgttattcatacgatacaaaaatata--tttattgtccataaatatattttcagca 259  Q
    ||||||| ||||||||||||  || ||| |||| ||||||||||||  |||| | | |||||||||||||||||||    
T  32520316 aaaatatgtttgcatcaaatttttcttcgtacggtacaaaaatatatttttactctacataaatatattttcagca 32520241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 272; Significance: 1e-152; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 746762 - 746422
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  746762 gttgttgcttttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataa 746663  T
Q  99 atttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    ||||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  746662 atttggaacaaataccacactgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgc 746563  T
Q  199 atcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 298  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  746562 atcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 746463  T
Q  299 caatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  746462 caatattctccatccatcaaattttgagtcatactacaaca 746422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 458289 - 457950
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  458289 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 458190  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    ||||||| |||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  458189 ttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 458090  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  458089 tcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 457990  T
Q  300 aatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  457989 aatattccccatccatcaaattttgagtcatactacaaca 457950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 455912 - 455571
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  455912 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 455813  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    ||||||| |||||| ||||||||||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  455812 ttggaacaaataccgcactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 455713  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  455712 tcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 455613  T
Q  300 aatattctccatccatcaaattttgagtcatactacaacaat 341  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  455612 aatattccccatccatcaaattttgagtcatactacaacaat 455571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 25533447 - 25533107
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc----aaagtttagcctgatacaaggtctatatttatagtaaacatataactcat 96  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  25533447 gttgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcat 25533348  T
Q  97 aaatttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 196  Q
    |||||| |||| |||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25533347 aaatttagaacaaatatcacactgaagatacgttttttt--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatattt 25533250  T
Q  197 gcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagc 296  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25533249 gcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatcttttatatttttagc 25533150  T
Q  297 aacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25533149 aacaatattctccatccatcaaattttgagtcatactacaaca 25533107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 42992291 - 42991953
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||||||||  ||||||||||||||    
T  42992291 gttgttgcctttttaaacccttgtttcagccccctctatctctcttaaagtttagcatgatacaaggtatatatttatagtaaaagtataactcataaat 42992192  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||  ||||  |||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42992191 ttggaattaatattacactgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 42992092  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  42992091 caaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaaccttttatatttttaacaaca 42991992  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42991991 atattctccatccatcaaattttgagtcatactacaaca 42991953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 10621782 - 10622127
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--------aaagtttagcctgatacaaggtctatatttatagtaaacatataac 92  Q
    |||||||| ||||||||||||||||||||| |||||||||| ||||        ||||||||||||||||||||||||||||||||||||||  ||||||    
T  10621782 gttgttgcttttctaaacccttgtttcagcaccctctatctctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataac 10621881  T
Q  93 tcataaatttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatat 192  Q
    ||||||||||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10621882 tcataaatttggaacaaataccacactgaagatacgtttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 10621980  T
Q  193 atttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 292  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  10621981 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatcttttatatttt 10622080  T
Q  293 tagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10622081 tagcaacaatattctccatccatcaaattttgagtcatactacaaca 10622127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 4104147 - 4104485
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  4104147 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 4104246  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    ||||||| |||||||||||||   |||           |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  4104247 ttggaacaaataccacactga---tacgttttttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgca 4104343  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  4104344 tcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcataaagtatatttgaaacaaatcttttatatttttagcaac 4104443  T
Q  300 aatattctccatccatcaaattttgagtcatactacaacaat 341  Q
    |||||||| | |||||||||||||||||||||||||||||||    
T  4104444 aatattcttcttccatcaaattttgagtcatactacaacaat 4104485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 13 - 339
Target Start/End: Original strand, 53915760 - 53916082
Alignment:
Q  13 ctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaata 112  Q
    |||||||||||||||||||||||||||||     || |||||  ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  53915760 ctaaacccttgtttcagccccctctatctt----aaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacgaata 53915855  T
Q  113 ccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttatt 212  Q
    ||||||| |||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  53915856 ccacactcaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttctt 53915955  T
Q  213 catacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatc 312  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53915956 catacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatc 53916055  T
Q  313 catcaaattttgagtcatactacaaca 339  Q
    | |||||||||||||||||||||||||    
T  53916056 cctcaaattttgagtcatactacaaca 53916082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 43 - 337
Target Start/End: Complemental strand, 42990249 - 42989954
Alignment:
Q  43 tctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacnnnnnnnnnn-ctcc 141  Q
    |||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||           ||||    
T  42990249 tctcaaagtttagcatgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacattttttttttctcc 42990150  T
Q  142 ttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtcc 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42990149 ttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtcc 42990050  T
Q  242 ataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 337  Q
    ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42990049 ataaatatactttcagcaaaaaatatatttgaaacaaattttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 42989954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 51943376 - 51943042
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||| |||||||||| ||||||||||    | | |||||  ||||| ||||||||||||||||||||||  ||||| ||||||||    
T  51943376 gttgttgcctttctaaacctttgtttcagcaccctctatct----ccaggtttactctgattcaaggtctatatttatagtaaaagtataaatcataaat 51943281  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    |||||||||||||||||||||||||||          |||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  51943280 ttggaacgaataccacactgaagatacgtttttctttctccttcaatgaaagaatatttacatcaaaaatataatattccctttcaaaatatatttgcat 51943181  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    |||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51943180 caaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 51943081  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  51943080 atattcttcatccatcaaattttgagtcatactacaaca 51943042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 11 - 339
Target Start/End: Complemental strand, 41849147 - 41848804
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctc------aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttgg 104  Q
    ||||||||||||||||||||||||||||||||||||      ||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  41849147 ttctaaacccttgtttcagccccctctatctatctctctctcaaagtttagcctgatacaatgtctatatttatagtaaaagtataactcataaatttgg 41849048  T
Q  105 aacgaataccacactgaagatacnnnnnnnnnn---------ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatt 195  Q
    ||| |||||||||||||||||||                   ||| |||||| |||||||||||||||||||||||||||||||  ||||||||||||||    
T  41849047 aacaaataccacactgaagatacgttttttttttttttttttctctttcagttaaagaatatttgcatcaaaaatataatattccttttcaaaatatatt 41848948  T
Q  196 tgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttag 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41848947 tgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttag 41848848  T
Q  296 caacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41848847 caacaatattctccatccatcaaattttgagtcatactacaaca 41848804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 53917916 - 53918254
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | ||||||||| |||||||||||||||| ||||    ||| |||||  ||||| ||||||||||||||||||||||  ||||||||||||||    
T  53917916 gttgttgtcattctaaaccattgtttcagccccctccatct----caaggtttaatctgattcaaggtctatatttatagtaaaagtataactcataaat 53918011  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||| |||||||||||||||||||||||          |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53918012 ttgaaacgaataccacactgaagatacgtttttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 53918111  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| |||||||| || ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  53918112 caaatcgttcttcatacggtaaaaaaatatatttattgtccataaatatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaaca 53918211  T
Q  301 atattctccatccatcaaattttgagtcatactacaacaatat 343  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  53918212 atattctccatccatcaaattttgagtcatactataacaatat 53918254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 1313414 - 1313081
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||| || |||||| |||||||||||||||||||||    ||| |||||  ||||| ||||||||||||||||||||||  ||||||||||||||    
T  1313414 gttgttgccattgtaaacc-ttgtttcagccccctctatct----caaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaat 1313320  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    |||||||||||| |||||| |||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1313319 ttggaacgaatatcacactaaagatacttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 1313221  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  1313220 caaatcgttcttcatacggtacagaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcatttatatttttagcaaca 1313121  T
Q  301 atattctccatccatcaaattttgagtcatactacaacaa 340  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1313120 atattctccatccatcaaattttgagtcatactacaacaa 1313081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 11 - 339
Target Start/End: Original strand, 27635889 - 27636212
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaaca-tataactcataaatttggaacga 109  Q
    |||||||||||||||||||||||||||||||    ||| |||||  || || |||||||||||||| ||||||| | |||||||||||||||||||||||    
T  27635889 ttctaaacccttgtttcagccccctctatct----caaggtttactctaattcaaggtctatatttgtagtaaaaaatataactcataaatttggaacga 27635984  T
Q  110 ataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgtt 209  Q
    ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27635985 ataccacactgaagatacattttttt--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtt 27636082  T
Q  210 attcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctcc 309  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  27636083 cttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaactaatattttatatttttagcaacaatattctcc 27636182  T
Q  310 atccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||| | |||||||||||||    
T  27636183 atccatcaaattttaaatcatactacaaca 27636212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6561815 - 6561694
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||||||||||||||||||||||||||||||||    ||||||| |||||  |||||||||||||||||||||||| | | |||||||||||||||    
T  6561815 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaggtttactctgatacaaggtctatatttatag-agaaatataactcataaat 6561721  T
Q  101 ttggaacgaataccacactgaagatac 127  Q
    |||||||||||| ||||||||||||||    
T  6561720 ttggaacgaatatcacactgaagatac 6561694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 265 - 339
Target Start/End: Complemental strand, 6561687 - 6561613
Alignment:
Q  265 tatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  6561687 tatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaatttcgagtcatactacaaca 6561613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 53974124 - 53974197
Alignment:
Q  256 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||    
T  53974124 agcacaaaatataattgaaacaaatcttttatatttttaacaacaacattcttcatccatcaaattttgagtca 53974197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6063698 - 6063779
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||    |||||||||||||||||||||||||||    
T  6063698 gttgttgcctttctaaacccttgtttcagccccctctatc--tctcaaagtttgctttgatacaaggtctatatttatagtaaa 6063779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 38210375 - 38210294
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||   ||||||||||||||| ||||||||||||||||    
T  38210375 gttgttgcttttctaaacccttgtttcagccccctctatctctctcaaa--atagcctgatacaaggcctatatttatagtaaa 38210294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 38890045 - 38889965
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||   |||||||||||||||||||||||||    
T  38890045 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagttt-gc--tatacaaggtctatatttatagtaaa 38889965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 10084645 - 10084724
Alignment:
Q  5 ttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||   | ||||||||||||||||||||||||||    
T  10084645 ttgcctttctaaacccttgttccagccccctctatctctctcaaagtttgctccgatacaaggtctatatttatagtaaa 10084724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 329
Target Start/End: Complemental strand, 11066429 - 11066255
Alignment:
Q  173 aatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttc----------------- 255  Q
    |||||||||||| ||||||||||||||||||||  |  |||||| | || ||||||||||||||||||||||||| |||||||                     
T  11066429 aatattctctttaaaaatatatttgcatcaaatattccttcatatggtaaaaaaatatatttattgtccataaatgtattttcaacaacaatcttccgaa 11066330  T
Q  256 agcacaaaatatatttgaaacaaatcttttat-atttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    ||||||| |||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||| |||||||    
T  11066329 agcacaagatatatttgaaacaaatcatttatcttttttagcaacaatattcttcatccatcaaattatgagtca 11066255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 11170409 - 11170330
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||   ||||||||||||||||||||||||||||    
T  11170409 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaagtttgctctgatacaaggtctatatttatagtaaa 11170330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 11072717 - 11072644
Alignment:
Q  256 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||    
T  11072717 agcacaagatatatttgaaacaaatcatttatattttttgcaacaatcttcttcatccatcaaattttgagtca 11072644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4308533 - 4308609
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||   |||||||||||||||||||||||||    
T  4308533 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaagtttgctctgatacaaggtctatatttatagt 4308609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 10191565 - 10191644
Alignment:
Q  5 ttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||||||   | ||||||||||||||||||||||||||    
T  10191565 ttgcctttctaaacccttgttccagccccctttatctctctcaaagtttgctccgatacaaggtctatatttatagtaaa 10191644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1626935 - 1627014
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  1626935 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaggtttacactgatacaatgtctatatttatagtaaa 1627014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 3859533 - 3859454
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   ||||||||||||||||||||||||||||    
T  3859533 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 3859454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5522867 - 5522946
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   ||||||||||||||||||||||||||||    
T  5522867 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 5522946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 11163155 - 11163076
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||   |||||||||||||||||||||| |||||    
T  11163155 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaagtttgctctgatacaaggtctatatttatcgtaaa 11163076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15780865 - 15780786
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| |||||||||||||||||||||||||||    ||||| |||||||  ||||||||||||||||||||||||||||    
T  15780865 gttgttgccattctaaacccttgtttcagccccctct----atctccaagtttactctgatacaaggtctatatttatagtaaa 15780786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 45882944 - 45882865
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    || ||||||   |||||||||||||||||||||||||||    
T  45882944 gttgttgcctttctaaacccttgtttcagccccctctatct----catagtttactatgatacaaggtctatatttatagtaaa 45882865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6066048 - 6066128
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||    |||||||||||||||||||||||||||    
T  6066048 gttgttgcctttctaaacccttgtttcagccccc---ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaa 6066128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 32219100 - 32219026
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttata 79  Q
    |||||||||||||| ||||||||||||||||||||||    |||||||||||||| | |||||||||||||||||||||    
T  32219100 gttgttgcctttctgaacccttgtttcagccccctct----atctcaaagtttagtcagatacaaggtctatatttata 32219026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 47149147 - 47149231
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagttta-gcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| |  ||   ||||||||||||||||||||||||||||    
T  47149147 gttgttgcctttctaaacccttgtttcagccccctctatctccctcaaggcctacatctgatacaaggtctatatttatagtaaa 47149231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24979712 - 24979636
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||| |||||||||||||||||||||||||||||    |||||||||||||  |||||||||||| ||||||||||||    
T  24979712 gttgttgtctttctaaacccttgtttcagccccctct----atctcaaagtttactctgatacaaggtatatatttatagt 24979636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 51727258 - 51727334
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||||||||||||||||||||||||||||    | |||||||||||||   |||||||||||||||||||||||||    
T  51727258 gttgttgcctttctaaacccttgtttcagccccc----tttatctcaaagtttgctctgatacaaggtctatatttatagt 51727334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 10958575 - 10958654
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |    |||||  ||||||||||||||||||||||||||||    
T  10958575 gttgttgccattctaaacccttgtttcagccccctctatctttat----gtttactctgatacaaggtctatatttatagtaaa 10958654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26720553 - 26720474
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||| ||||||||||||||||||    | ||||||   ||||||||||||||||||||||||||||    
T  26720553 gttgttgcctttctaaacccttatttcagccccctctatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 26720474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 47701847 - 47701926
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    | |||||||| |||||  ||||||||| ||||||||||||||||||    
T  47701847 gttgttgcctttctaaacccttgtttcagccccc----tttatctcaaggtttacactgatacaatgtctatatttatagtaaa 47701926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 1321441 - 1321367
Alignment:
Q  6 tgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||    ||||||||||||   ||||||||| ||||||||||||||||||    
T  1321441 tgcctttctaaacccttgtttcagccccctct----atctcaaagtttgctctgatacaaagtctatatttatagtaaa 1321367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 10956279 - 10956358
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| |||||||||||||||||||||||||||||||   |||  |||||  ||||||||||||||||||||||||||||    
T  10956279 gttgttgccattctaaacccttgtttcagccccctctatct---tcat-gtttactctgatacaaggtctatatttatagtaaa 10956358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 18097152 - 18097232
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| |||||||||||||||| |||||||||||||| ||   |||||||   |||||||||||||||||||||||||||    
T  18097152 gttgttgccattctaaacccttgtttgagccccctctatctctc---aagtttactatgatacaaggtctatatttatagtaaa 18097232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 18099422 - 18099501
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||   |||||||  ||||||||||||||||| ||||||||||    
T  18099422 gttgttgccattctaaacccttgtttcagccccctctatctctc---aagtttactctgatacaaggtctata-ttatagtaaa 18099501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27101433 - 27101513
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||||||||||||||||||||||||| ||||||||| | ||  | |||   |||||||||||||||||||||||||    
T  27101433 gttgttgcctttctaaacccttgtttcagcctcctctatctctatctcaatttgctctgatacaaggtctatatttatagt 27101513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 54287487 - 54287627
Alignment:
Q  184 tcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttca-----------------gcacaaaata 266  Q
    ||||||||||||||||||||||  |  |||||||  ||||||||| |||||||| ||||||||||||||||||                 |||| |||||    
T  54287487 tcaaaatatatttgcatcaaatattccttcatacagtacaaaaatgtatttattatccataaatatattttcaacagcaatcttttggaagcacgaaata 54287586  T
Q  267 tatttgaaacaaatcttttatatttttagcaacaatattct 307  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  54287587 tatttgaaacaaatcttttatatttttagcaacaatcttct 54287627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 5191658 - 5191579
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcct-gatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    ||||| |||||| || | ||||||||||||||||||||||||||    
T  5191658 gttgttgcctttctaaacccttgtttcagccccctct----atctccaagttt-gcttagatacaaggtctatatttatagtaaa 5191579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 35918201 - 35918277
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||||||||||||||||||||||||||||||||||||    |||| |||    ||||||||||||||||||||||||    
T  35918201 gttgttgcctttctaaacccttgtttcagccccctctatct----caaaatttgctatgatacaaggtctatatttatagt 35918277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43226091 - 43226015
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   ||||||||| |||||||||||||||    
T  43226091 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaatgtctatatttatagt 43226015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 51675007 - 51675103
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| |||||||||||||||||||||||||||||||||    ||| |||||   |||||||| |||||||||||||||||| | ||  |||||||||    
T  51675007 gttgttgtctttctaaacccttgtttcagccccctctatct----caacgtttacattgatacaacgtctatatttatagtaaaaacatccctcataaat 51675102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12268218 - 12268297
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| |||||||||| ||||||||||| |||||||    ||||||||||||  |||||||||| |||||||||||||||||    
T  12268218 gttgttgtctttctaaactcttgtttcagctccctcta----tctcaaagtttactctgatacaagttctatatttatagtaaa 12268297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 22114561 - 22114636
Alignment:
Q  5 ttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||| |||||||    | ||||||   ||||||||||||||||||||||||||||    
T  22114561 ttgcctttctaaacccttgtttcagccccttctatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 22114636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 28137547 - 28137626
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||| |||||  ||||||||| |  |||||||||||||||    
T  28137547 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaggtttactctgatacaacgcatatatttatagtaaa 28137626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 35777426 - 35777347
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||||||||||||||||||||||||||    ||||||||    |||||||| ||||||||||||||||||    
T  35777426 gttgttgcttttctaaacccttgtttcagccccctctatct----caaagtttgctttgatacaatgtctatatttatagtaaa 35777347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43421667 - 43421746
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||| ||||     |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  43421667 gttgttgcctttctaaacccttgtttcaacccc----ttctatctcaaggtttacactgatacaatgtctatatttatagtaaa 43421746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43423715 - 43423794
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||||| |||    ||| |||||   |||||||| ||||||||||||||||||    
T  43423715 gttgttgcctttctaaacccttgtttcagccccctctttct----caaggtttacagtgatacaatgtctatatttatagtaaa 43423794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 53468707 - 53468786
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| ||||||||||||||||||||||||| ||||||    || |||||  ||||||||| ||||||||||||||||||    
T  53468707 gttgttgccattctaaacccttgtttcagccccctttatcta----aaggtttacactgatacaatgtctatatttatagtaaa 53468786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30005846 - 30005801
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  30005846 gttgttgcctttctaaacccttgtttcagccccctctatctctctc 30005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 32264291 - 32264374
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaag----tttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||| |||||||    ||||||||||||    ||||  ||||||||||||||||||||||||||||    
T  32264291 gttgttgcctttctaaacccttgtttgagccccc----tctatctcaaagttaatttactctgatacaaggtctatatttatagtaaa 32264374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28102254 - 28102294
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  28102254 gttgttgcctttctaaacccttgtttcagccccctctatct 28102294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42990309 - 42990269
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  42990309 gttgttgcctttctaaacccttgtttcagccccctctatct 42990269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9604859 - 9604940
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--aaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||  | |||||   || ||||||||||||||||||||||    
T  9604859 gttgttgcctttctaaacc-ttgtttcagccccctctatctctctctcagagttttctctaatacaaggtctatatttatagt 9604940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28761680 - 28761776
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| |||||||||||||||||||| |||||    |||||||||| |||||  ||||| ||| ||||||||||||||||||  |||  |||||||||    
T  28761680 gttgttgtctttctaaacccttgtttcaaccccc----tctatctcaaggtttactctgatgcaaagtctatatttatagtaaaagtatccctcataaat 28761775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43228296 - 43228220
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||||||||||||| ||||||||||||||||||||||    | ||||||   ||||||||| |||||||||||||||    
T  43228296 gttgttgcctttctaaactcttgtttcagccccctctatct----ccaagtttgctctgatacaatgtctatatttatagt 43228220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 50494004 - 50493928
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||| |||||||||||||||||||||||||||||||| ||    |||||    ||||||||||||||||||||||||    
T  50494004 gttgttgcttttctaaacccttgtttcagccccctctatctctc----agtttgctttgatacaaggtctatatttatagt 50493928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 880704 - 880783
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| |||||||| |||||||||| |||||||||||    ||| |||||  ||||||||| ||||||||||||||||||    
T  880704 gttgttgccattctaaactcttgtttcagacccctctatct----caaggtttacactgatacaatgtctatatttatagtaaa 880783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 3314689 - 3314610
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||| ||||||||||||||| ||||||||||||||    ||||||| |||||  |||||||||  |||||||||||||||||    
T  3314689 gttgttacctttctaaacccttatttcagccccctct----atctcaaggtttacactgatacaatatctatatttatagtaaa 3314610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5927016 - 5927095
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||||||||||||||||| ||||||||    ||| |||||  | ||||||| ||||||||||||||||||    
T  5927016 gttgttgcatttctaaacccttgtttcagccctctctatct----caaggtttacaccgatacaatgtctatatttatagtaaa 5927095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6231454 - 6231375
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||| |||||||||||||| ||||||||    |||  ||||  ||||||||| ||||||||||||||||||    
T  6231454 gttgttgcctttctaaatccttgtttcagcccgctctatct----caagatttacactgatacaatgtctatatttatagtaaa 6231375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 53974011 - 53974077
Alignment:
Q  189 atatatttgcatcaaatcgttatt-catacgatacaaaaatatatttattgtccataaatatatttt 254  Q
    |||||||||||||||||| |  || |||||| ||||||||||||||||||||| |||||||||||||    
T  53974011 atatatttgcatcaaatcttcctttcatacggtacaaaaatatatttattgtctataaatatatttt 53974077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 340
Target Start/End: Complemental strand, 27000123 - 27000082
Alignment:
Q  299 caatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  27000123 caatattctccatccatcaaattttcagtcatactacaacaa 27000082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 53597232 - 53597144
Alignment:
Q  14 taaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaac 107  Q
    ||||||||||||||| ||||     |||||||||| |||||  ||||||||||||||||||||||||||||  |||  |||||||| |||||||    
T  53597232 taaacccttgtttcatcccc-----tctatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatccctcataaaattggaac 53597144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28100293 - 28100333
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  28100293 gttgttgcttttctaaacccttgtttcagccccctctatct 28100333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3306804 - 3306708
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||  |||||||||||||||||||||||||| ||||| |    | |||||  ||||||||| |||||||||||||||||| | ||  |||||||||    
T  3306804 gttgttgtatttctaaacccttgtttcagccccctatatctct----aggtttacactgatacaatgtctatatttatagtaaaaacatctctcataaat 3306709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 11072801 - 11072731
Alignment:
Q  189 atatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    |||||||||||||||||| |   | ||||| ||||||||| ||||| |||||||||||| |||||||||||    
T  11072801 atatatttgcatcaaatcttccgtaatacggtacaaaaatctatttgttgtccataaatgtattttcagca 11072731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 36011832 - 36011753
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| ||||||||| ||||||||||||||||    | |||||||| |||||  || |||||| ||||||||||||||||||    
T  36011832 gttgttgtctttctaaatccttgtttcagccccc----tttatctcaaggtttacactaatacaatgtctatatttatagtaaa 36011753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 48361923 - 48362001
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| | ||||||||| ||||||||||||||| ||||    ||||||||||   |||||||||||||||||||||||||||    
T  48361923 gttgttgtcattctaaacc-ttgtttcagccccctgtatc----tcaaagtttactatgatacaaggtctatatttatagtaaa 48362001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 53591200 - 53591121
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| |||||||||| |||||||||||| ||    |||||||||| |||||  || |||||| ||||||||||||||||||    
T  53591200 gttgttgtctttctaaactcttgtttcagcctcc----tctatctcaaggtttacacttatacaatgtctatatttatagtaaa 53591121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 890024 - 890102
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||||||||||||||  ||    |||||||||| |||||  |||||||||  |||||||||||||||||    
T  890024 ttgttgccattctaaacccttgtttcagcttcc----tctatctcaaggtttacactgatacaatatctatatttatagtaaa 890102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29956691 - 29956646
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc 46  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||    
T  29956691 gttgttgaatttctaaacccttgtttcagccccctctatctctctc 29956646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 39715472 - 39715400
Alignment:
Q  3 tgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatag 80  Q
    |||||||| ||||||||||| ||||||||||     |||||||||| |||||  ||||||||| ||||||||||||||    
T  39715472 tgttgcctctctaaacccttatttcagcccc-----tctatctcaaggtttacactgatacaatgtctatatttatag 39715400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 23633431 - 23633363
Alignment:
Q  39 tctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaac 107  Q
    |||||||||| |||||  ||||||||| ||||||||||||||||||  |||  |||||||| |||||||    
T  23633431 tctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattggaac 23633363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 1618916 - 1619012
Alignment:
Q  10 tttctaaacccttgttt-cagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaac 107  Q
    ||||||||||||||||| ||||||||||| |||  ||||| |||||   || ||||||||||||||||||||| ||  |||  |||||||| |||||||    
T  1618916 tttctaaacccttgttttcagccccctctgtct--ctcaaggtttactatggtacaaggtctatatttatagtcaaagtatccctcataaaattggaac 1619012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 5535882 - 5535929
Alignment:
Q  212 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    |||||||||||||| |||| |||  |||||||||||||||||||||||    
T  5535882 tcatacgatacaaatatatcttttctgtccataaatatattttcagca 5535929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 84
Target Start/End: Complemental strand, 25388855 - 25388824
Alignment:
Q  53 tagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||    
T  25388855 tagcctgatacaaggtctatatttatagtaaa 25388824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 28181027 - 28180950
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| |||||||||||  | ||||||||||||||||||    ||| |||||  ||||||||| ||||||||||||||||||    
T  28181027 gttgttgtctttctaaacc--tatttcagccccctctatct----caaggtttacactgatacaatgtctatatttatagtaaa 28180950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 6719392 - 6719442
Alignment:
Q  34 ctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||| ||| |||||||||||   ||||||||||||||||||||||||||||    
T  6719392 ctctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaa 6719442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 11072898 - 11072830
Alignment:
Q  57 ctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagata 126  Q
    |||||||||| ||| |||||||||  || |||||||||| |||||||||||| ||| ||| |||||||||    
T  11072898 ctgatacaagatctttatttatagagaa-atataactcacaaatttggaacggatatcacgctgaagata 11072830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4560517 - 4560557
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||| ||||| |||||| |||||||||||||||||||||    
T  4560517 gttgttacctttataaaccattgtttcagccccctctatct 4560557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 6719357 - 6719389
Alignment:
Q  9 ctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||||| ||||||||||||||||||    
T  6719357 ctttctaaacccttatttcagccccctctatct 6719389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 54884162 - 54884122
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||||||||||||||||  ||| ||||||||||    
T  54884162 gttgttgcctttctaaacccttgttcgagctccctctatct 54884122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 94)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 31735777 - 31736115
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  31735777 gttgttgcctttctaaacccttgttttagccccctctatctcattcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 31735876  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31735877 ttggaacaaataccacactgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 31735976  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31735977 caaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 31736076  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  31736077 atattctccttccatcaaattttgagtcatactacaaca 31736115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 47906295 - 47905956
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  47906295 gttgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataa 47906196  T
Q  99 atttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    ||||||||| |||||||||||||||||||          |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47906195 atttggaacaaataccacactgaagatacttttttttt-ctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgc 47906097  T
Q  199 atcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 298  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47906096 atcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 47905997  T
Q  299 caatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  47905996 caatattctccatccatcaaattttgagtcatactacaaca 47905956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 39932098 - 39931762
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||| | || |||||||||||||||||||||||||||||||||||||||||    
T  39932098 gttgttgcctttctaaacccttgtttcagccccctctatct--ctcaaagttttgtctcatacaaggtctatatttatagtaaacatataactcataaat 39932001  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||||||||| |||||||||||||          |||||||| | |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  39932000 ttggaacgaatactacactgaagatacgtttttttttctccttcaataaaagaatatttgcatcaaaagtataatattccctttcaaaatatatttgcat 39931901  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39931900 caaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 39931801  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39931800 atattctccatccatcaaattttgagtcatactacaaca 39931762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 9463500 - 9463840
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  9463500 gttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataa 9463599  T
Q  99 atttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    ||||||||| ||||||||| |||||||||          |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9463600 atttggaacaaataccacaatgaagatacgtttttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgc 9463699  T
Q  199 atcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 298  Q
    || |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9463700 attaaattgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 9463799  T
Q  299 caatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9463800 caatattctccatccatcaaattttgagtcatactacaaca 9463840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 21948443 - 21948756
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  21948443 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtatgatacaaggtctatatttatagtaaacatataactcataaat 21948542  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    |||||||||||||||||||||||||||            ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21948543 ttggaacgaataccacactgaagatacgttttttttttcctccttctgtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgc 21948642  T
Q  199 atcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 298  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21948643 atcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 21948742  T
Q  299 caatattctccatc 312  Q
    ||||||||||||||    
T  21948743 caatattctccatc 21948756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 27337194 - 27337532
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||| |||||||    
T  27337194 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagtataacgcataaat 27337293  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||| |||||||||  ||||||||           ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27337294 ttggaacaaataccacatcgaagatacgtttttttttttccttcagttaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 27337393  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27337394 caaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttatatatttttagcaaca 27337493  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  27337494 atattccccatccatcaaatttggagtcatactacaaca 27337532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 9459673 - 9460013
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  9459673 gttgttgactttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataa 9459772  T
Q  99 atttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    ||||||||| ||||||||| |||||||||          |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9459773 atttggaacaaataccacaatgaagatacgtttttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgc 9459872  T
Q  199 atcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 298  Q
    || |||| ||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9459873 attaaattgttcttcatacggtataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 9459972  T
Q  299 caatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9459973 caatattctccatccatcaaattttgagtcatactacaaca 9460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 24325688 - 24325346
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc----aaagtttagcctgatacaaggtctatatttatagtaaacatataactcat 96  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||    |||||||   ||||||||||||||||||||||||||||  ||||||||||    
T  24325688 gttgttgcctttctaa-cccttgtttcagccccctctatctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtataactcat 24325590  T
Q  97 aaatttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 196  Q
    ||||||||||| ||||||||||| |||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24325589 aaatttggaacaaataccacactaaagatacatttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcactttcaaaatatattt 24325490  T
Q  197 gcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagc 296  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24325489 gcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagc 24325390  T
Q  297 aacaatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24325389 aacaatattctccatccatcaaattttgagtcatactacaacaa 24325346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 27339387 - 27339730
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatt 101  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  27339387 ttgttgcctttctaagcccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagtataactcataaatt 27339486  T
Q  102 tggaacgaataccacactgaagatacnnnnnnnnnnct--ccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    |||||| |||||||||||||||||||           |  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27339487 tggaacaaataccacactgaagatacgttcttttttttttccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 27339586  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataa----atatattttcagcacaaaatatatttgaaacaaatcttttatatttttag 295  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27339587 tcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatatattttcagcacaaaatatatttgaaacaaatcttttatatttttag 27339686  T
Q  296 caacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  27339687 caacaatattctccatccgtcaaatttggagtcatactacaaca 27339730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 15295090 - 15295441
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc----------aaagtttagcctgatacaaggtctatatttatagtaaacatata 90  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||          |||||||   ||||||||||||||||||||||||||||||||||    
T  15295090 gttgttgcctttctaaacccttgtttcagccctctctatctctctctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaacatata 15295189  T
Q  91 actcataaatttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaa 189  Q
    ||||||||||| |||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15295190 actcataaattaggaacgaataccacactgaagatacattttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcgctttcaaaa 15295289  T
Q  190 tatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 289  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15295290 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 15295389  T
Q  290 ttttagcaacaatattctccatccatcaaattttgagtcatactacaacaat 341  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  15295390 ttttagcaacaatattcttcttccatcaaattttgagtcatactacaacaat 15295441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 28998509 - 28998845
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | ||||||||||||||||||||| |||||||||    |||||||||  ||||| ||| ||||||||||||||||||  ||||||||||||||    
T  28998509 gttgttgtcattctaaacccttgtttcagcctcctctatct----caaagtttactctgattcaaagtctatatttatagtaaaagtataactcataaat 28998604  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    ||||||||||||||||||| || ||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28998605 ttggaacgaataccacactaaatatacggtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 28998704  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    ||||||  || ||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  28998705 tcaaatatttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttttagcaac 28998804  T
Q  300 aatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  28998805 aatattctccatccatcaaattttgagtcatactacaacaa 28998845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 29004225 - 29004561
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | ||||||||||||||||||||| |||||||||    |||||||||  ||||| ||| ||||||||||||||||||  ||||||||||||||    
T  29004225 gttgttgtcattctaaacccttgtttcagcctcctctatct----caaagtttactctgattcaaagtctatatttatagtaaaagtataactcataaat 29004320  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    ||||||||||||||||||| || ||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29004321 ttggaacgaataccacactaaatatacggtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 29004420  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    ||||||  || ||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  29004421 tcaaatatttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttttagcaac 29004520  T
Q  300 aatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29004521 aatattctccatccatcaaattttgagtcatactacaacaa 29004561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 17324892 - 17325228
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||| |||||||||||||||| |||||||| |||||   |||  |||||  ||| | ||||||||||||||||||||||  ||||||||||||||    
T  17324892 gttgttgccattctaaacccttgttttagccccctgtatct---tcag-gtttactctggttcaaggtctatatttatagtaaaagtataactcataaat 17324987  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    |||||||||||| ||| ||||||||||           |||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  17324988 ttggaacgaatatcaccctgaagatacgttttttttttctccttcagtgaaagaatatttgcataaaaaatataatattcccttgcaaaatatatttgca 17325087  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  17325088 tcaaatcgtttttcatacggtacaaaaatatatttattgtccataaatatattttcaactcaaaatatatttgaaacaaatcttttatatttttagcaac 17325187  T
Q  300 aatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17325188 aatattctccatccatcaaattttgagtcatactacaacaa 17325228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 48665202 - 48664852
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctcta--tctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    |||||||||||||||||||||||||||| |||||||    ||||||| || |||||  ||||| ||||||||||||||||||||||  ||||||||||||    
T  48665202 gttgttgcctttctaaacccttgtttcaaccccctccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagtataactcataa 48665103  T
Q  99 atttggaacgaataccacactgaagatacnnnnnnnnnnctc----------cttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaa 188  Q
    ||||||||| ||||| |||||||||||||           |           ||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  48665102 atttggaacaaatactacactgaagatacgttttttttttttttttttctttcttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaa 48665003  T
Q  189 atatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 288  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48665002 atatatgtgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 48664903  T
Q  289 tttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48664902 tttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 48664852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 2949487 - 2949816
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | |||||||||||||||||||||||||||||||    ||| ||||   | ||| |||  ||||||||||| |||||  ||||||||||||||    
T  2949487 gttgttgtcattctaaacccttgtttcagccccctctatct----caaggttttctcggattcaatatctatatttattgtaaaagtataactcataaat 2949582  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    |||||||||||||||      ||||||             |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  2949583 ttggaacgaatacca------agatacgttttttttttctcttcagtgaaagaatatttgtatcaaaaatataatattccctttcaaaatatatttgcat 2949676  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2949677 caaatcattcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 2949776  T
Q  301 atattctccatccatcaaattttgagtcatactacaacaa 340  Q
    ||||||| ||||||| |||||||||||||||||| |||||    
T  2949777 atattcttcatccatgaaattttgagtcatactataacaa 2949816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 154 - 339
Target Start/End: Original strand, 6115532 - 6115718
Alignment:
Q  154 atatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattt 253  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6115532 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcattcatacgatacaaaaatatatttattgtccataaatatattt 6115631  T
Q  254 tcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaa-ttttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  6115632 tcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttttgagtcatcctacaaca 6115718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 149 - 339
Target Start/End: Original strand, 45693834 - 45694024
Alignment:
Q  149 aaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaata 248  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  45693834 aaagaatatttgcataaaaaatatattattctctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaata 45693933  T
Q  249 tattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  45693934 tatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgaatcatagtacaaca 45694024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 147 - 339
Target Start/End: Original strand, 4131690 - 4131882
Alignment:
Q  147 tgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttatt-gtccataa 245  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  4131690 tgaaagaatatttgcatcaaaa-tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatttgtccataa 4131788  T
Q  246 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4131789 atatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 4131882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 2510583 - 2510801
Alignment:
Q  4 gttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttg 103  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  2510583 gttgcctttataaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttg 2510682  T
Q  104 gaacgaataccacactgaagatac-----nnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    |||| |||||||||||||| ||||               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2510683 gaacaaataccacactgaaaatacgttttttttctttccctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 2510782  T
Q  199 atcaaatcgttattcatac 217  Q
    ||||||||||| |||||||    
T  2510783 atcaaatcgttcttcatac 2510801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 151 - 339
Target Start/End: Complemental strand, 6997395 - 6997214
Alignment:
Q  151 agaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatata 250  Q
    |||||||||||||||||||||||||||||||||||||      |||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||    
T  6997395 agaatatttgcatcaaaaatataatattctctttcaa------tttgcatcaaatcgttcttcatacggtataaaaatatatttattgtccataa-tata 6997303  T
Q  251 ttttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  6997302 tttttagcacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatactataaca 6997214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 34 - 227
Target Start/End: Original strand, 46432013 - 46432207
Alignment:
Q  34 ctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacnnnnnn 133  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||          
T  46432013 ctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacagtgaagatacgttttt 46432112  T
Q  134 nnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaa 227  Q
         |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  46432113 tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaa 46432207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 224 - 339
Target Start/End: Original strand, 46432521 - 46432636
Alignment:
Q  224 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46432521 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 46432620  T
Q  324 gagtcatactacaaca 339  Q
    ||||||||||||||||    
T  46432621 gagtcatactacaaca 46432636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 141 - 301
Target Start/End: Complemental strand, 6996221 - 6996067
Alignment:
Q  141 cttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtc 240  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||      ||| |||||||||||| |||||||| ||||||||||||| |||||||    
T  6996221 cttcagtgaaagaatatttgcaacaaaaatataatattccctttcaa------tttacatcaaatcgttcttcatacggtacaaaaatatatgtattgtc 6996128  T
Q  241 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaa 301  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6996127 cataaatatattttcagcacaaaatatatttgaaacaagtcttttatatttttagcaacaa 6996067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 186 - 339
Target Start/End: Complemental strand, 16561284 - 16561131
Alignment:
Q  186 aaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatctttt 285  Q
    ||||||||||||  ||||||  |  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  16561284 aaaatatatttgtttcaaatattccttcatacggtacaaaaagatatttattgtcaataaatatattttcagcacaaaatatatttgaaacaaatatttt 16561185  T
Q  286 atatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||| ||||||    
T  16561184 atatttttagcaacaatattcttcatccaacaaattttgaatcatacaacaaca 16561131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 329
Target Start/End: Original strand, 13785662 - 13785835
Alignment:
Q  173 aatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagca------------- 259  Q
    |||||||  ||| ||||||||||||||||||||| |  ||||||||||||||||||||||||| | || ||||||||||||||||||                 
T  13785662 aatattccttttaaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctaga 13785761  T
Q  260 ----caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
        ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||    
T  13785762 aacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccatccatcaatttttgagtca 13785835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 39 - 205
Target Start/End: Original strand, 26520408 - 26520580
Alignment:
Q  39 tctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacnnnnnnnnnn- 137  Q
    |||||||||| |||||  ||||||||| ||||||||||||||  || |||||||| |||||||||||||||||| ||||||||||||||               
T  26520408 tctatctcaaggtttactctgatacaaagtctatatttatagagaa-atataacttataaatttggaacgaatatcacactgaagatacatttcttttgt 26520506  T
Q  138 ------ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaat 205  Q
          || |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26520507 ttttttcttcttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 26520580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 173 - 259
Target Start/End: Original strand, 11693580 - 11693666
Alignment:
Q  173 aatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    ||||||| |||| ||||||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11693580 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgtccataaatatattttcagca 11693666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 47177387 - 47177304
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||    |||||||||||||||||||||||||||    
T  47177387 gttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaa 47177304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 47179738 - 47179655
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||    |||||||||||||||||||||||||||    
T  47179738 gttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaa 47179655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 28207322 - 28207401
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| ||||||||||||||||||||||||||||||    ||||||||||||| ||||||||||||||||||||||||||||    
T  28207322 gttgttgtctttctaaacccttgtttcagccccctcta----tctcaaagtttagtctgatacaaggtctatatttatagtaaa 28207401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 6995956 - 6996065
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||| ||||||| |||||||||||||    |||  ||||  ||||| ||||||||||||||||| ||||  ||||||||||||||    
T  6995956 gttgttgcctttctaaaccgttgtttcggccccctctatct----caagatttactctgattcaaggtctatatttataataaaagtataactcataaat 6996051  T
Q  101 ttggaacgaatacc 114  Q
    ||||||||||||||    
T  6996052 ttggaacgaatacc 6996065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12302761 - 12302845
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagttta-gcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||| |||||   ||||||||||||||||||||||||||||    
T  12302761 gttgttgcatttctaaacccttgtttcagccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagtaaa 12302845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 28842520 - 28842439
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||   |||||||||||| |||||||||||||||    
T  28842520 gttgttgcctttctaaacccttgtttcagccccctctatc--tctcaaagtttgctctgatacaaggtttatatttatagtaaa 28842439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 329
Target Start/End: Complemental strand, 32260881 - 32260746
Alignment:
Q  211 ttcatacgatacaaaaatatatttattgtccataaatatattttcag-----------------cacaaaatatatttgaaacaaatcttttatattttt 293  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||                 |||||||||||||| |||||| ||||||||||||||    
T  32260881 ttcatacggtacaaaaatatatttattgttcataaatatattttcagcaacaatcttctgaaaacacaaaatatattttaaacaattcttttatattttt 32260782  T
Q  294 agcaacaatattctccatccatcaaattttgagtca 329  Q
    ||||||||| |||| |||||||||||||||||||||    
T  32260781 agcaacaatcttcttcatccatcaaattttgagtca 32260746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 6115479 - 6115541
Alignment:
Q  138 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6115479 ctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 6115541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 13215106 - 13215027
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    |||||||| ||||  ||||||||||||||||||||||||||||    
T  13215106 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaaatttactctgatacaaggtctatatttatagtaaa 13215027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41646945 - 41646866
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||| ||||||||||||||||||    |||||||||  ||||||||||||||||||||||||||||    
T  41646945 gttgttgcctttctaaacccttatttcagccccctctatct----caaagtttactctgatacaaggtctatatttatagtaaa 41646866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20302484 - 20302405
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||   ||||||||||||||||||||||| ||||    
T  20302484 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaagtttgctctgatacaaggtctatatttataataaa 20302405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 38925734 - 38925813
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||| ||| |||||||||||||||||||    ||||||||||||  ||||||||||||||||||||||||||||    
T  38925734 gttgttgcctttctgaactcttgtttcagccccctcta----tctcaaagtttactctgatacaaggtctatatttatagtaaa 38925813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 51750064 - 51749985
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   ||||||||||||||||||||||||||||    
T  51750064 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 51749985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 28840705 - 28840624
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||| ||||||||||||||||||||| |||||| |||||  ||||||||||   ||||||||||||||||||||||||||||    
T  28840705 gttgtttcctttctaaacccttgtttcatccccctgtatct--ctcaaagtttgctctgatacaaggtctatatttatagtaaa 28840624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 14352842 - 14352759
Alignment:
Q  173 aatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttca 256  Q
    ||||||| |||| ||||||||||||||||||||| |  |||||||| |||||||||||||||| | | ||||||||||||||||    
T  14352842 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttactattcataaatatattttca 14352759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6823040 - 6822961
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||   ||||||||||||||||||  ||||||||    
T  6823040 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaagtttgctctgatacaaggtctatataaatagtaaa 6822961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 13761862 - 13761783
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||| ||||||||    | ||||||   ||||||||||||||||||||||||||||    
T  13761862 gttgttgcctttctaaacccttgtttcagccctctctatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 13761783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15823571 - 15823492
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||| ||||| |    |||||||   |||||||||||||||||||||||||||    
T  15823571 gttgttgcctttctaaacccttgtttcagccccctttatctct----aagtttactttgatacaaggtctatatttatagtaaa 15823492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18307134 - 18307059
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatag 80  Q
    |||||||||||||||||||||||||||||||||||||    ||||||| |||||  ||||||||| ||||||||||||||    
T  18307134 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaggtttacactgatacaatgtctatatttatag 18307059  T

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Target: chr1; HSP #47
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 47451673 - 47451594
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| ||| |||||||||||| ||||||||||||||    |||||||||  ||||||||||||||||||||||||||||    
T  47451673 gttgttgccattccaaacccttgtttaagccccctctatct----caaagtttactctgatacaaggtctatatttatagtaaa 47451594  T

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Target: chr1; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6823910 - 6823830
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||   ||||||||||||||||||  ||||||||    
T  6823910 gttgttgcctttctaaacccttgtttcagccccc---ctctatctcaaagtttgctctgatacaaggtctatataaatagtaaa 6823830  T

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Target: chr1; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3579872 - 3579953
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||| ||||||||| ||||||||||||||||||| ||  |||||||||| ||||  ||||||||||||||||||||| ||||||    
T  3579872 gttgctgcctttctgaacccttgtttcagccccccct--ctatctcaaattttacgctgatacaaggtctatatttaaagtaaa 3579953  T

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Target: chr1; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2617541 - 2617465
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||| ||||||||||||||||||||||| ||    |||||||||||||||   |||||||||||||||||||||||||    
T  2617541 gttgttgtctttctaaacccttgtttcagcctcc----tctatctcaaagtttgctctgatacaaggtctatatttatagt 2617465  T

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Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 10115555 - 10115509
Alignment:
Q  256 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaat 302  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  10115555 agcacaaaatatatttgaaacaaatcttttatatttttaacaacaat 10115509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 11457731 - 11457810
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| ||||||||||| ||||||||||||||    |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  11457731 gttgttgtctttctaaaccattgtttcagccccc----tctatctcaaggtttacactgatacaatgtctatatttatagtaaa 11457810  T

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Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 25248770 - 25248841
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatattt 76  Q
    ||||||||||||||||||||||||||||||||||    |||||||||| |||||  ||||||||| ||||||||||    
T  25248770 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaggtttactctgatacaaagtctatattt 25248841  T

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Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25251531 - 25251610
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| ||||||||||| ||||||||||||||    |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  25251531 gttgttgtctttctaaacctttgtttcagccccc----tctatctcaaggtttactctgatacaaagtctatatttatagtaaa 25251610  T

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Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31423130 - 31423209
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||| |||||  ||||||||| |  |||||||||||||||    
T  31423130 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaggtttacactgatacaatgcttatatttatagtaaa 31423209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 51752390 - 51752311
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||| ||||||||||| ||||||||||||||||||||||    | ||||||   ||||||||||||||||||||||||||||    
T  51752390 gttgttacctttctaaactcttgtttcagccccctctatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 51752311  T

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Target: chr1; HSP #57
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 16231625 - 16231547
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| |||||| |||||||||||||||||||||||||    ||||||||    |||||||||||||||||||||||||||    
T  16231625 ttgttgcttttctagacccttgtttcagccccctctatct----caaagtttgctttgatacaaggtctatatttatagtaaa 16231547  T

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Target: chr1; HSP #58
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16428678 - 16428637
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatcta 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16428678 gttgttgcctttctaaacccttgtttcagccccctctatcta 16428637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 13112047 - 13112099
Alignment:
Q  220 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttg 272  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||||    
T  13112047 tacaaaaatatatttattgtccatgaatatattttcagcataaaatacatttg 13112099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 14098229 - 14098302
Alignment:
Q  4 gttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||| |||||| ||||||||| ||||||||    |||||||||||||  ||||||||||||||||||||||||    
T  14098229 gttgcctttttaaaccattgtttcagtcccctcta----tctcaaagtttagtttgatacaaggtctatatttatagt 14098302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17318918 - 17318878
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17318918 gttgttgcctttctaaacccttgtttcagccccctctatct 17318878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 11693686 - 11693753
Alignment:
Q  262 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    |||||||||| |||||||  ||||||| ||||||||| ||| |||| |||||||||||||||||||||    
T  11693686 aaatatatttaaaacaaaatttttataattttagcaataatcttcttcatccatcaaattttgagtca 11693753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16226192 - 16226113
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||||||||||| || |||||||||||    ||||||||    |||||||||||||||||||||||||||    
T  16226192 gttgttgcttttctaaacccttgttttagacccctctatct----caaagtttgctttgatacaaggtctatatttatagtaaa 16226113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20291482 - 20291403
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||| | ||||||||||    |||| |||   || |||||||||||||||||||||||||    
T  20291482 gttgttgcctttctaaacccttgtttcatctccctctatct----caaaatttgctctaatacaaggtctatatttatagtaaa 20291403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 31489940 - 31489861
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||| ||||||||||||||||||||| ||||||||    ||||||| |||||  || |||||| ||||||||||||||||||    
T  31489940 gttgttacctttctaaacccttgtttcaaccccctct----atctcaaggtttacactaatacaatgtctatatttatagtaaa 31489861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 50076928 - 50077007
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| ||||||||| ||||||||||||||    | |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  50076928 gttgttgtctttctaaatccttgtttcagccc----tttctatctcaaggtttacactgatacaatgtctatatttatagtaaa 50077007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 50079085 - 50079156
Alignment:
Q  9 ctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||    |||||||||| |||||  || |||||| ||||||||||||||||||    
T  50079085 ctttctaaacccttgtttcagccccc----tctatctcaaggtttacactaatacaatgtctatatttatagtaaa 50079156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25127897 - 25127852
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc 46  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  25127897 gttgttgcctttctaaacccttgtttcaggcccctctatctctctc 25127852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 49495468 - 49495534
Alignment:
Q  14 taaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||    ||| |||||  ||||||||| ||||||||||||||||||    
T  49495468 taaacccttgtttcagccccctctatct----caaggtttactctgatacaaagtctatatttatagtaaa 49495534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 14183852 - 14183921
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||| ||||||||    ||| |||||  |||||||| |||||||||||||||||||    
T  14183852 ttctaaacccttgtttcagccctctctatct----caaggtttactctgatacatggtctatatttatagtaaa 14183921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17186384 - 17186424
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  17186384 gttgttgcctttctaaacccttatttcagccccctctatct 17186424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18839612 - 18839572
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  18839612 gttgttgcctatctaaacccttgtttcagccccctctatct 18839572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31425275 - 31425315
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  31425275 gttgttgcctttctaaacccttgtttcagccccctttatct 31425315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 6997388 - 6997427
Alignment:
Q  300 aatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  6997388 aatattctccatccatcatattttgagtcatactacaaca 6997427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 26613503 - 26613571
Alignment:
Q  11 ttctaaacccttgttt-cagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatag 80  Q
    |||||||||||||||| |||||||||||||||  ||||| ||||   ||||||||||||||||||||||||    
T  26613503 ttctaaacccttgttttcagccccctctatct--ctcaaggtttcatctgatacaaggtctatatttatag 26613571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 39462540 - 39462468
Alignment:
Q  5 ttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||| |||||||||| |||||||||||     | ||||||||||||||||  |||||||||||||||||||||||||    
T  39462540 ttgcatttctaaacctttgtttcagcc----ttctctatctcaaagtttactctgatacaaggtctatatttatagt 39462468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 6115344 - 6115456
Alignment:
Q  10 tttctaaacccttgtttcagccccctctatctatctcaaagtttag------cctgatacaaggtctatatttatagtaaacatataa--ctcataaatt 101  Q
    |||||||||||||||||||||||||    |||||||||| ||||||      |  |||||||||||||||||||||| | | ||||||  ||||||||||    
T  6115344 tttctaaacccttgtttcagccccc----tctatctcaaggtttagaggatacaagatacaaggtctatatttatag-agaaatataacgctcataaatt 6115438  T
Q  102 tggaacgaataccacact 119  Q
    ||||||||||| ||||||    
T  6115439 tggaacgaatatcacact 6115456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 10400084 - 10400159
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatag 80  Q
    ||||||| | |||||||||||||||||||||||||||||||  |    |||||   ||||||||||||||||||||||||    
T  10400084 gttgttgtcattctaaacccttgtttcagccccctctatctccc----agtttgctctgatacaaggtctatatttatag 10400159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 50248828 - 50248907
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| |||| |||||| |||||||||| ||||||||||    ||| |||||  ||||||||| ||||||||||||||||||    
T  50248828 gttgttgtctttttaaacctttgtttcagctccctctatct----caaggtttacactgatacaatgtctatatttatagtaaa 50248907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9241342 - 9241421
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||| ||||||||||||||    ||||||| || |||||  ||||||||| | ||||||||||||||||    
T  9241342 gttgttgcctttctaaacc-ttgtttcagcccccc---tctatcttaaggtttactctgatacaaagcctatatttatagtaaa 9241421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 46431963 - 46431996
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  46431963 gttgttgcctttctaaacccttgtttcagccccc 46431996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4131635 - 4131675
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  4131635 gttgttgccattctaaatccttgtttcagccccctctatct 4131675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 10115653 - 10115572
Alignment:
Q  173 aatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttca 256  Q
    |||||||  ||| ||||||||||||||||||||  |  ||||||||  | ||||  ||||||||||||||||||||||||||||    
T  10115653 aatattccgtttaaaaatatatttgcatcaaatattccttcatacgggataaaa--atatttattgtccataaatatattttca 10115572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 18800835 - 18800904
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| |||||||||||||     | |||||||| |||||  ||||||||||||||||||||||||||||    
T  18800835 ttctaaacctttgtttcagcccc----ttgtatctcaaggtttactctgatacaaggtctatatttatagtaaa 18800904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 292
Target Start/End: Original strand, 16855265 - 16855296
Alignment:
Q  261 aaaatatatttgaaacaaatcttttatatttt 292  Q
    ||||||||||||||||||||||||||||||||    
T  16855265 aaaatatatttgaaacaaatcttttatatttt 16855296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 339
Target Start/End: Original strand, 21964366 - 21964397
Alignment:
Q  308 ccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||    
T  21964366 ccatccatcaaattttgagtcatactacaaca 21964397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 42922249 - 42922157
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaac 107  Q
    |||||||||||| ||||| ||||||||||||     || |||||  |||||||||  |||||||||||||||||  |||  ||||||||||||||||    
T  42922249 ttctaaacccttatttcaaccccctctatctt----aaggtttactctgatacaaaatctatatttatagtaaaagtatccctcataaatttggaac 42922157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6756552 - 6756514
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctat 39  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  6756552 gttgttgcctttctaagcccttgtttcagtcccctctat 6756514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 16432430 - 16432396
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccct 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  16432430 gttgttgcctttctaaacccttgtttctgccccct 16432396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 16561441 - 16561373
Alignment:
Q  57 ctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagata 126  Q
    |||||| ||||| |||||||||||  || |||||||||||||||||| |||| ||| ||| |||||||||    
T  16561441 ctgatataaggtttatatttatagagaa-atataactcataaatttgaaacggatatcacgctgaagata 16561373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 30790684 - 30790729
Alignment:
Q  39 tctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  30790684 tctatctcaaggtttactctgatacaatgtctatatttatagtaaa 30790729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 10115506 - 10115466
Alignment:
Q  289 tttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    ||||| |||||||||||||  ||||||||||||||||||||    
T  10115506 ttttttgcaacaatattcttaatccatcaaattttgagtca 10115466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 10115735 - 10115695
Alignment:
Q  86 atataactcataaatttggaacgaataccacactgaagata 126  Q
    ||||||||||||||||||||||| ||| ||| |||||||||    
T  10115735 atataactcataaatttggaacggatatcacgctgaagata 10115695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 13449852 - 13449880
Alignment:
Q  53 tagcctgatacaaggtctatatttatagt 81  Q
    |||||||||||||||||||||||||||||    
T  13449852 tagcctgatacaaggtctatatttatagt 13449880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 20626073 - 20625733
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||    
T  20626073 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataaacatataactcataaat 20625974  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    |||||||||||||||||||||||||||           |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |    
T  20625973 ttggaacgaataccacactgaagatacgtttttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatatttgta 20625874  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20625873 tcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 20625774  T
Q  300 aatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  20625773 aatattctccatccatcaaattttgagtcatactagaacaa 20625733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 20629964 - 20629624
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||    
T  20629964 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataaacatataactcataaat 20629865  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    |||||||||||||||||||||||||||           |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |    
T  20629864 ttggaacgaataccacactgaagatacgtttttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatatttgta 20629765  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20629764 tcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 20629665  T
Q  300 aatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  20629664 aatattctccatccatcaaattttgagtcatactagaacaa 20629624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 20642383 - 20642043
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||    
T  20642383 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataaacatataactcataaat 20642284  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    |||||||||||||||||||||||||||           |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |    
T  20642283 ttggaacgaataccacactgaagatacgtttttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatatttgta 20642184  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20642183 tcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 20642084  T
Q  300 aatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  20642083 aatattctccatccatcaaattttgagtcatactagaacaa 20642043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 3035756 - 3035415
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  3035756 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 3035657  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttg 197  Q
    ||||||| ||||||| |||||||||||             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3035656 ttggaacaaataccatactgaagatacgttttttttctttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttg 3035557  T
Q  198 catcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 297  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3035556 catcaaatcattcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 3035457  T
Q  298 acaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3035456 acaatattctccatccatcaaattttgagtcatactacaaca 3035415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 11757264 - 11756925
Alignment:
Q  1 gttgttgcctttctaaaccc-ttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaa 99  Q
    ||||||| | |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  11757264 gttgttgtcattctaaaccccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaa 11757165  T
Q  100 tttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    |||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11757164 tttggaacaaataccacactgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 11757065  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11757064 tcaaatagttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 11756965  T
Q  300 aatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11756964 aatattctccatccatcaaattttgagtcatactacaaca 11756925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 7472234 - 7472574
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7472234 gttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaat 7472333  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    ||||||| |||||||||||||||||||            |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7472334 ttggaacaaataccacactgaagatacgtttttttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgc 7472433  T
Q  199 atcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 298  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7472434 atcaaatcgttcttcatatgatacaataatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 7472533  T
Q  299 caatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7472534 caatattctccatccatcaaattttgagtcatactacaaca 7472574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 7092429 - 7092768
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | |||||||||||||||||||||||||| |||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  7092429 gttgttgtcattctaaacccttgtttcagccccctccatctctctcaaagtttgctctgatacaaggtctatatttatagtaaacatataactcataaat 7092528  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnc-tccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    |||||||||||||||||||||||||||          | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7092529 ttggaacgaataccacactgaagatacaattttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 7092628  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7092629 tcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 7092728  T
Q  300 aatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7092729 aatattctccatccatcaaattttgagtcatactacaaca 7092768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 7094676 - 7095015
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||    
T  7094676 gttgttgccattctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttataataaacatataactcataaat 7094775  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnc-tccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    |||||||||||||||||||||||||||          | ||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  7094776 ttggaacgaataccacactgaagatacgtttttttttcctccttcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaatatatttgca 7094875  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7094876 tcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 7094975  T
Q  300 aatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7094976 aatattctccatccatcaaattttgagtcatactacaaca 7095015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 7470276 - 7470621
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7470276 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaat 7470375  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-------ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatata 193  Q
    |||||||||||||||||||||||||||                 |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  7470376 ttggaacgaataccacactgaagatacgtttttttttttcttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 7470475  T
Q  194 tttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 293  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7470476 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatgttttatattttt 7470575  T
Q  294 agcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  7470576 agcaataatattctccatccatcaaattttgagtcatactacaaca 7470621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 20299494 - 20299155
Alignment:
Q  1 gttgttgcctttctaaaccc-ttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaa 99  Q
    ||||||| | |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  20299494 gttgttgtcattctaaaccccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaa 20299395  T
Q  100 tttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    | |||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20299394 tatggaacaaataccacactgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 20299295  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20299294 tcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaac 20299195  T
Q  300 aatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20299194 aatattctccatccatcaaattttgagtcatactacaaca 20299155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 38394021 - 38393683
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  38394021 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 38393922  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||| |||||||||||||||||||          | ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  38393921 ttggaacaaataccacactgaagatacgttattttttcaccttcagtgaaagaatatttgcatcaaaaatataacattccctttcaaaatatatttgcat 38393822  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38393821 caaatcgttcttcatacgatacaaaaatatatttattgtccataaataaattttcagcacaaaatatatttgaaacaaatcttatatatttttagcaaca 38393722  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||| || |||||||||||||    
T  38393721 atattctccatccatcaaatttagaatcatactacaaca 38393683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 7349527 - 7349867
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  7349527 gttgttgcctttctaaacccctgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataa 7349626  T
Q  99 atttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    ||||||||| |||| ||||||||||||||          ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7349627 atttggaacaaatatcacactgaagatacgtttttttttctcattcagtgaaagaatatttgcctcaaaaatataatattctctttcaaaatatatttgc 7349726  T
Q  199 atcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 298  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7349727 atcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaa 7349826  T
Q  299 caatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  7349827 caatattctccatccatcaatttttgagtcatactacaaca 7349867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 28485601 - 28485261
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  28485601 gttgttgcctttctaaacccttgtttcaaccccttctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 28485502  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    ||||||| |||||||||||||||||||            ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28485501 ttggaacaaataccacactgaagatacgtgttttttttcctccttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgc 28485402  T
Q  199 atcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 298  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28485401 atcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatattttatatttttagcaa 28485302  T
Q  299 caatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  28485301 caatattcttcatccatcaaattttgaatcatactacaaca 28485261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 342
Target Start/End: Original strand, 7351906 - 7352249
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||||||||||||||  ||||||||||||    
T  7351906 gttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtttatatttatagtaaaagtataactcataa 7352005  T
Q  99 atttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    ||||||||| |||| ||||||||||||||          ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  7352006 atttggaacaaatatcacactgaagatacgtttttttttctcattcagtgaaagaatatttgcctcaaaaatataatattccctttcaaaatatatttgc 7352105  T
Q  199 atcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 298  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7352106 atcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaa 7352205  T
Q  299 caatattctccatccatcaaattttgagtcatactacaacaata 342  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  7352206 caatattctccatccatcaatttttgagtcatactacaacaata 7352249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 18345576 - 18345237
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||||||||||||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||    
T  18345576 gttgttgcctttctaaacccttgtttcaaccccctctatctccctcaaagttcagcctgatacaaggtctatatttatagtaaaagtataactcataaat 18345477  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    ||||||| |||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  18345476 ttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccatttcaaaatatatttgca 18345377  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18345376 tcaaatcgttcttcatacggtacaaaaatatatttattgtcaataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaac 18345277  T
Q  300 aatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18345276 aatattctccatccatcaaattttgagtcatactacaaca 18345237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 28487588 - 28487249
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||  ||||||||||||||    
T  28487588 gttgttacctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacatggtctatatttataggaaaagtataactcataaat 28487489  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    || |||| |||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28487488 ttagaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 28487389  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28487388 tcaaatcattcttcatacgatacaaaattatatttattgtccataaatatattttcagcacaaaatatatttgaagcaaatcttttatatttttagcaac 28487289  T
Q  300 aatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28487288 aatattctccatccatcaaattttgagtcatactacaaca 28487249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 31156165 - 31156500
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||||  | ||||||||| |||||||||||||||||  |||| |||||||||    
T  31156165 gttgttgcctttctaaacccttgtttcagccccctctatct----caaagtttgccttgatacaagctctatatttatagtaaaagtatagctcataaat 31156260  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    ||||||| ||||||||||||||||| |           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31156261 ttggaacaaataccacactgaagattcgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 31156360  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31156361 tcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaac 31156460  T
Q  300 aatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  31156461 aatattctccatccatcaatttttgagtcatactacaaca 31156500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 37412382 - 37412717
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||    | | |||||  ||||| |||||||||||||||||||||| |||||||||||||||    
T  37412382 gttgttgccattctaaacccttgtttcagccccctatatct----ccaggtttactctgattcaaggtctatatttatagtaaaaatataactcataaat 37412477  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    |||||||||||| ||||||||||||||          ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37412478 ttggaacgaataacacactgaagatacgtttttttttctccttcagtggaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 37412577  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    |||||| || |||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37412578 caaatcattcttcatacgttacataattatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 37412677  T
Q  301 atattctccatccatcaaattttgagtcatactacaacaa 340  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37412678 atattctccatccatcaaattttgagtcatactacaacaa 37412717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 34 - 339
Target Start/End: Complemental strand, 38396292 - 38395986
Alignment:
Q  34 ctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacnnnnnn 133  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||          
T  38396292 ctctctctctctcaaaatttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatacgttttt 38396193  T
Q  134 nnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatat 232  Q
         |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38396192 tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatat 38396093  T
Q  233 ttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatac 332  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38396092 ttattgtacataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatac 38395993  T
Q  333 tacaaca 339  Q
    |||||||    
T  38395992 tacaaca 38395986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 39 - 339
Target Start/End: Complemental strand, 1606471 - 1606171
Alignment:
Q  39 tctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacnnnnnnnnnnc 138  Q
    |||||||||||||||    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||| |          |    
T  1606471 tctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagattcgtttttttttc 1606372  T
Q  139 tccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattg 238  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1606371 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattg 1606272  T
Q  239 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 338  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  1606271 tccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaac 1606172  T
Q  339 a 339  Q
    |    
T  1606171 a 1606171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 342
Target Start/End: Complemental strand, 21990185 - 21989850
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | |||||||||||||||||||||||     |||||||| | |||||  ||||| ||||||||||||||||||||||  ||||||||||||||    
T  21990185 gttgttgtcattctaaacccttgtttcagcccc-----tctatctccaggtttactctgattcaaggtctatatttatagtaaaattataactcataaat 21990091  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnc-tccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    |||||||||||||||||| ||||||||          | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21990090 ttggaacgaataccacacagaagatacgtttttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 21989991  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  21989990 tcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca--acacaatatatttgaaacaaatcttttatatttttagcaac 21989893  T
Q  300 aatattctccatccatcaaattttgagtcatactacaacaata 342  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  21989892 aatattctccatccatcaaattttgggtcatactacaacaata 21989850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 42331253 - 42331593
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | |||||||||||||||||||||||||||||||    |||||||||| ||||||||| ||||||||||||||||||  ||||||||||||||    
T  42331253 gttgttgtcattctaaacccttgtttcagccccctctatct----caaagtttagtctgatacaaagtctatatttatagtaaaagtataactcataaat 42331348  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn------ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatat 194  Q
    ||||||||||||||||||| |||||||                |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42331349 ttggaacgaataccacactaaagatacgtttttttttttctttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 42331448  T
Q  195 ttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 294  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42331449 ttgcatcaaatcgttcttcatacggtacaaaaatatacttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatattttta 42331548  T
Q  295 gcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||    
T  42331549 gcaacaatattcttcattcatcaaattttaagtcatactacaaca 42331593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 1850015 - 1849665
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctc------------aaagtttagcctgatacaaggtctatatttatagtaaacatat 89  Q
    |||||||||||||||||||||||||||||||||||||||| ||||            |||||||    ||| |||||||||||||||||||||||  |||    
T  1850015 ttgttgcctttctaaacccttgtttcagccccctctatctctctctctctctctctcaaagtttgctatgaaacaaggtctatatttatagtaaaagtat 1849916  T
Q  90 aactcataaatttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaa 188  Q
    |||||||||||||||||| ||||||||||||||||| |           |||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  1849915 aactcataaatttggaacaaataccacactgaagattcgttttttttttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaa 1849816  T
Q  189 atatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 288  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1849815 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 1849716  T
Q  289 tttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  1849715 tttttagcaacaatattcttcttccatcaaattttgagtcatactacaaca 1849665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 70 - 339
Target Start/End: Original strand, 21470614 - 21470883
Alignment:
Q  70 tatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaa 169  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||          ||||||||||||||||||||||||||||||||    
T  21470614 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaa 21470713  T
Q  170 tataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatat 269  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21470714 tataatattccctttcaaaatatattcgcatcaaatcgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatatat 21470813  T
Q  270 ttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  21470814 ttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcaaactacaaca 21470883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 139 - 339
Target Start/End: Complemental strand, 47865528 - 47865328
Alignment:
Q  139 tccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattg 238  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47865528 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattg 47865429  T
Q  239 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47865428 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatactacaac 47865329  T
Q  339 a 339  Q
    |    
T  47865328 a 47865328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 24258498 - 24258166
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||    ||| |||||  |||||||||   ||||||||||||  || |||||||||||||||    
T  24258498 gttgttgcctttctaaacccttgtttcagccccctctatct----caatgtttactctgatacaaaacctatatttatagagaa-atataactcataaat 24258404  T
Q  101 ttggaacgaataccacac--tgaagatacnnnnnnnnnn------ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatat 192  Q
    |||||||||||| |||||  |||||||||                |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  24258403 ttggaacgaatatcacacactgaagatacatttctttatttttttctccttcagtgaaagaatatttacatcaaaaatataatattccctttcaaaatat 24258304  T
Q  193 atttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 292  Q
    ||||||||||| ||||  |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24258303 atttgcatcaa-tcgtccttcatactgtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 24258205  T
Q  293 tagcaacaatattctccatccatcaaattttgagtcata 331  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  24258204 tagcaacaatattcttcttccatcaaattttgagtcata 24258166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 13099730 - 13099996
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||| |||||||||||||||||| ||||||||||||    ||| |||||   |||| ||||||||||||||||||||||  ||||||||||||||    
T  13099730 gttgttgccattctaaacccttgtttcaaccccctctatct----caaggtttactttgattcaaggtctatatttatagtaaaagtataactcataaat 13099825  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    |||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  13099826 ttggaacgaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgta 13099925  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatt 270  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13099926 tcaaatcgttcttcatacggtacgaaaatatatttattgtccataaatatattttcagcacaaaatatatt 13099996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 2 - 235
Target Start/End: Complemental strand, 20297396 - 20297163
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatt 101  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||  |||||||| ||||||    
T  20297396 ttgttgccattctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtccatatttttagtaaaagtataactcgtaaatt 20297297  T
Q  102 tggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatc 201  Q
    |||||| |||||||||||||||||||          ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20297296 tggaacaaataccacactgaagatacgtttttttttctccttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatc 20297197  T
Q  202 aaatcgttattcatacgatacaaaaatatattta 235  Q
    |||||||| |||||||||||||||||||||||||    
T  20297196 aaatcgttcttcatacgatacaaaaatatattta 20297163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 14 - 340
Target Start/End: Complemental strand, 3677301 - 3676996
Alignment:
Q  14 taaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaatac 113  Q
    ||||||||||||||||||||     |||||||| |||||||  ||||| |||| ||||||||||||||||| | |||||||||||||||||||||||||     
T  3677301 taaacccttgtttcagcccc-----tctatctccaagtttactctgattcaagatctatatttatagtaaaaacataactcataaatttggaacgaatat 3677207  T
Q  114 cacactgaagatacnnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgtta 210  Q
    ||||||||||||||             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  3677206 cacactgaagatacgttttttttttctctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttc 3677107  T
Q  211 ttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctcca 310  Q
    |||||||| ||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3677106 ttcatacggtacaaaaatata-------------------ttttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctcca 3677026  T
Q  311 tccatcaaattttgagtcatactacaacaa 340  Q
    || |||||||||||||||||||||||||||    
T  3677025 tctatcaaattttgagtcatactacaacaa 3676996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 43253770 - 43254035
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccct----ctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcat 96  Q
    ||||||| | ||||||| |||||||||||||| ||    || ||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  43253770 gttgttgtcattctaaaaccttgtttcagccctctttctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcat 43253869  T
Q  97 aaatttggaacgaataccacactgaagatacnnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatata 193  Q
    ||||||||||| |||||||||| ||||||||             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43253870 aaatttggaacaaataccacaccgaagatactttcttattttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 43253969  T
Q  194 tttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43253970 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagca 43254035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 191 - 339
Target Start/End: Complemental strand, 443474 - 443326
Alignment:
Q  191 atatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 290  Q
    ||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  443474 atatttgcatcaaattgttcttcagacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 443375  T
Q  291 tttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  443374 tttagcaacaatattctccatccatcaaattttgagtcatactacaaca 443326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 211 - 342
Target Start/End: Original strand, 40281862 - 40281995
Alignment:
Q  211 ttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaa--tattctc 308  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||  | ||||     
T  40281862 ttcatacggtacaaaaatatatttattttccataaatatattttcaacacaaaatatatttgaaacaaatattttatatttttagcaacaaattcttctt 40281961  T
Q  309 catccatcaaattttgagtcatactacaacaata 342  Q
    |||||||||||||||||||||||||||| |||||    
T  40281962 catccatcaaattttgagtcatactacaccaata 40281995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 48457688 - 48457608
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48457688 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagt 48457608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 443630 - 443508
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||| ||||||||| |||||| ||| ||||||||||    ||| |||||  ||||| ||| ||||||||||||||||||  ||||||||||||||    
T  443630 gttgttgccattctaaaccattgttttagctccctctatct----caaggtttactctgattcaaagtctatatttatagtaaaagtataactcataaat 443535  T
Q  101 ttggaacgaataccacactgaagatac 127  Q
    ||||||||||| |||||||||||||||    
T  443534 ttggaacgaattccacactgaagatac 443508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 27306483 - 27306562
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  27306483 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaagtttactctgatacaaggtctatatttatagtaaa 27306562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 44599 - 44520
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||   ||||||||||||||||||||||||||||    
T  44599 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaagtttgctctgatacaaggtctatatttatagtaaa 44520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 10690756 - 10690684
Alignment:
Q  256 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  10690756 agcacaaaatatatttgaaacata-cttttatatttttagcaacaatcttctccctccatcaaattttgagtca 10690684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 276 - 329
Target Start/End: Complemental strand, 20297161 - 20297108
Alignment:
Q  276 caaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20297161 caaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 20297108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9680854 - 9680770
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagttta-gcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| |||||||||||||||||| |||||||||||| |||||| |||||   ||||||||||||||||||||||||||||    
T  9680854 gttgttgcccttctaaacccttgtttcaaccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagtaaa 9680770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1049549 - 1049628
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||   || |||||||||||||||||||||||||    
T  1049549 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaagtttgctctaatacaaggtctatatttatagtaaa 1049628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18567648 - 18567569
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||     ||||||||||||||||  |||||||||| |||||||||||||||||    
T  18567648 gttgttgcctttctaaacccttgtttcagcccc----ttctatctcaaagtttactctgatacaagatctatatttatagtaaa 18567569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31435301 - 31435380
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||     ||||||||||||||||  |||||||||| |||||||||||||||||    
T  31435301 gttgttgcctttctaaacccttgtttcagcccc----ttctatctcaaagtttactctgatacaagatctatatttatagtaaa 31435380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3878612 - 3878540
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatt 75  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||   |||||||||||||||||||    
T  3878612 gttgttgtctttctaaacccttgtttcagccccctctatc--tctcaaagtttgctctgatacaaggtctatatt 3878540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 35664 - 35585
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| |||||| ||||||||||||||||||||||||||    ||||||||   ||||||||||||||||||||||||||||    
T  35664 gttgttgtctttctgaacccttgtttcagccccctctatct----caaagtttgctctgatacaaggtctatatttatagtaaa 35585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 11355293 - 11355214
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    ||||||| |||||  ||||||||| | ||||||||||||||||    
T  11355293 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaggtttacactgatacaaagcctatatttatagtaaa 11355214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 21680062 - 21679983
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    ||||||| |||||  || |||||| ||||||||||||||||||    
T  21680062 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaggtttacactaatacaatgtctatatttatagtaaa 21679983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9679094 - 9678993
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagttta-gcctgatacaaggtctatatttatagtaaacatataactcataaa 99  Q
    ||||||| | ||||| | ||||||||||||||||||||||| ||||||||||||   |||||||||| ||||||||||||||||| | ||  ||||||||    
T  9679094 gttgttgtcattctagatccttgtttcagccccctctatctctctcaaagtttacatctgatacaagatctatatttatagtaaaaacatccctcataaa 9678995  T
Q  100 tt 101  Q
    ||    
T  9678994 tt 9678993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 22392495 - 22392429
Alignment:
Q  14 taaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||    |||||||||  ||||||||||||||||||||||||||||    
T  22392495 taaacccttgtttcagccccctctatct----caaagtttactctgatacaaggtctatatttatagtaaa 22392429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40946363 - 40946283
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||||||||||||||||||||||||||||||| ||  |||||||||||    ||| ||||||| ||||||||||||    
T  40946363 gttgttgcctttctaaacccttgtttcagccccctctgtccctctcaaagtttgctatgaaacaaggtttatatttatagt 40946283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 7188568 - 7188476
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaac 107  Q
    |||||||||||||||||||||||||||||||    ||| |||||  ||||||||| ||||||||||||||||||  |||  |||||||| |||||||    
T  7188568 ttctaaacccttgtttcagccccctctatct----caaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattggaac 7188476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25542565 - 25542487
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||| |||||||||||| |||||||||||||     |||||||||||||||   ||||||||||||||||||||||||||||    
T  25542565 gttgttacctttctaaacctttgtttcagcccc-----tctatctcaaagtttgctctgatacaaggtctatatttatagtaaa 25542487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 322
Target Start/End: Original strand, 12310542 - 12310608
Alignment:
Q  256 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattt 322  Q
    ||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||| ||||||    
T  12310542 agcacaaaatatatttgaaacaaatcttttatatcagtagcaacaatcttcttcatccattaaattt 12310608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 20137363 - 20137442
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||| |||||  ||||||||| | | ||||||||||||||    
T  20137363 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaggtttactctgatacaaagccaatatttatagtaaa 20137442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22251796 - 22251875
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||| |||||||||||| ||    ||||||||||||||||  ||||| |||||| |||||||||||||||    
T  22251796 gttgttgcctttctaaactcttgtttcagcctcc----tctatctcaaagtttactctgattcaaggtttatatttatagtaaa 22251875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 43254023 - 43254069
Alignment:
Q  285 tatatttttagcaacaatattctccatccatcaaattttgagtcata 331  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  43254023 tatatttttagcaacaatattctccatccatcaaattttgagacata 43254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 44724614 - 44724535
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||| |||||    | | |||||  ||||||||| ||||||||||||||||||    
T  44724614 gttgttgcctttctaaacccttgtttcagccccctatatct----ccaggtttacactgatacaatgtctatatttatagtaaa 44724535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26804604 - 26804529
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||  |    |||||||||||||||||||||||    
T  26804604 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaagtttactc----acaaggtctatatttatagtaaa 26804529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 21678099 - 21678022
Alignment:
Q  3 tgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||    ||| |||||   ||||||||  |||||||||||||||||    
T  21678099 tgttgcctttctaaacccttgtttcagccccctctatct----caaggtttacattgatacaatatctatatttatagtaaa 21678022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1047178 - 1047265
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctcta----tctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||||| |||||||||||||||||    ||| ||||  || ||||| ||||||||||| |||||||||||||||    
T  1047178 gttgttgcttttctaaacccctgtttcagccccctctatctctctctctcttagattagcttgatacaaggtttatatttatagtaaa 1047265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22828887 - 22828966
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||| ||||||||||||||||||||||    ||| |||||  | ||||||| | ||||||||||||||||    
T  22828887 gttgttgcctttctaaactcttgtttcagccccctctatct----caaggtttactcggatacaaagcctatatttatagtaaa 22828966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 40836996 - 40837075
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||| |||||||||||    || ||||| || |||   ||||||||||||||||||||||||||||    
T  40836996 gttgttgcctttctaaacccttctttcagccccc----tcaatctccaaatttgctctgatacaaggtctatatttatagtaaa 40837075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 24748628 - 24748550
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||| ||||||||||||||||||||||||||||||  |    |||||||||  ||||||||| ||||||||||||| ||||    
T  24748628 ttgttgtctttctaaacccttgtttcagccccctctaagt----caaagtttacactgatacaatgtctatatttataataaa 24748550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 42223192 - 42223112
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| |||||||||||||||||| ||| |   ||||||||||| |||||  ||||||||| | ||||||||||||||||    
T  42223192 gttgttgccattctaaacccttgtttcatcccac---atctatctcaaggtttactctgatacaaagcctatatttatagtaaa 42223112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4296189 - 4296269
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatac-aaggtctatatttatagtaaa 84  Q
    ||||||| | ||||||||||||||||||||||||    |||||||||| |||||  ||||||| || ||||||||||||||||||    
T  4296189 gttgttgtcattctaaacccttgtttcagccccc----tctatctcaaggtttacactgatacaaatgtctatatttatagtaaa 4296269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 12484976 - 12485023
Alignment:
Q  212 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||    
T  12484976 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12485023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 12506407 - 12506454
Alignment:
Q  212 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||    
T  12506407 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12506454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 38396351 - 38396316
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctc 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  38396351 gttgttgcctttctaaacccttgtttcagccccctc 38396316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 259
Target Start/End: Original strand, 12310442 - 12310528
Alignment:
Q  173 aatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    |||||||  ||| ||||||||||| ||||||||| |  |||||||| |||||||||||||| | ||||| ||| |||| ||||||||    
T  12310442 aatattccttttaaaaatatatttacatcaaatcttccttcatacggtacaaaaatatattaactgtccttaagtataatttcagca 12310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 39146241 - 39146320
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| || |||||||||||||||||||||||    || ||||||| |||||  ||||||||  ||||||||||||||||||    
T  39146241 gttgttgtctatctaaacccttgtttcagccccc----tccatctcaaggtttacactgatacagtgtctatatttatagtaaa 39146320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21592397 - 21592437
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  21592397 gttgttgcatttctaaacctttgtttcagccccctctatct 21592437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 292
Target Start/End: Complemental strand, 6628884 - 6628853
Alignment:
Q  261 aaaatatatttgaaacaaatcttttatatttt 292  Q
    ||||||||||||||||||||||||||||||||    
T  6628884 aaaatatatttgaaacaaatcttttatatttt 6628853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 12657600 - 12657647
Alignment:
Q  212 tcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    |||||||||||||||||||||||  | ||||| |||||||||||||||    
T  12657600 tcatacgatacaaaaatatatttgctatccatgaatatattttcagca 12657647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 292
Target Start/End: Original strand, 12657667 - 12657698
Alignment:
Q  261 aaaatatatttgaaacaaatcttttatatttt 292  Q
    ||||||||||||||||||||||||||||||||    
T  12657667 aaaatatatttgaaacaaatcttttatatttt 12657698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 41
Target Start/End: Complemental strand, 24465575 - 24465544
Alignment:
Q  10 tttctaaacccttgtttcagccccctctatct 41  Q
    ||||||||||||||||||||||||||||||||    
T  24465575 tttctaaacccttgtttcagccccctctatct 24465544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Original strand, 12485044 - 12485074
Alignment:
Q  262 aaatatatttgaaacaaatcttttatatttt 292  Q
    |||||||||||||||||||||||||||||||    
T  12485044 aaatatatttgaaacaaatcttttatatttt 12485074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Original strand, 12506475 - 12506505
Alignment:
Q  262 aaatatatttgaaacaaatcttttatatttt 292  Q
    |||||||||||||||||||||||||||||||    
T  12506475 aaatatatttgaaacaaatcttttatatttt 12506505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 443490 - 443461
Alignment:
Q  138 ctccttcagtgaaagaatatttgcatcaaa 167  Q
    ||||||||||||||||||||||||||||||    
T  443490 ctccttcagtgaaagaatatttgcatcaaa 443461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 20091829 - 20091897
Alignment:
Q  39 tctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaac 107  Q
    |||||||||| |||||  |||||| || ||||||||||||||||||  |||  |||||||| |||||||    
T  20091829 tctatctcaaggtttactctgataaaaagtctatatttatagtaaaagtatccctcataaaattggaac 20091897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 265; Significance: 1e-148; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 23452491 - 23452829
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  23452491 gttgttgcctttctaaacccttgtttcagccccctctgtctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 23452590  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||| ||||||||||||||| |||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23452591 ttggaacaaataccacactgaaggtacttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 23452690  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23452691 caaatcgtccttcatacgatacaaaaatatatttattgtccataaatttattttcagcataaaatatatttgaaacaaatcttttatatttttagcaaca 23452790  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23452791 atattctccatccatcaaattttgagtcatactacaaca 23452829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 35215840 - 35216184
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc------aaagtttagcctgatacaaggtctatatttatagtaaacatataactc 94  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||      ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  35215840 gttgttgcttttctaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactc 35215939  T
Q  95 ataaatttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatat 194  Q
    ||||||||||||| |||||||||| |||||| |          |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  35215940 ataaatttggaacaaataccacaccgaagattcatttttttttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaatatat 35216039  T
Q  195 ttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 294  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35216040 ttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 35216139  T
Q  295 gcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  35216140 gcaacaatattcttcatccatcaaattttgagtcatactacaaca 35216184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 35218217 - 35218566
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc----------aaagtttagcctgatacaaggtctatatttatagtaaacatata 90  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||          |||||||||||| |||||||||||||||||||||||||  ||||    
T  35218217 gttgttgcttttctaaacccttgtttcagccccctctatctctctctctctctctcaaagtttagccttatacaaggtctatatttatagtaaaagtata 35218316  T
Q  91 actcataaatttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaat 190  Q
    ||||||||||||||| | ||||||||||||||||| |          |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35218317 actcataaatttggagcaaataccacactgaagattcgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaat 35218416  T
Q  191 atatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 290  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35218417 atatttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 35218516  T
Q  291 tttagcaacaatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35218517 tttagcaacaatattcttcatccatcaaattttgagtcatactacaacaa 35218566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 341
Target Start/End: Complemental strand, 42452784 - 42452447
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   ||||||||| ||||||||||||| ||||  ||||||||||||||    
T  42452784 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaatgtctatatttataataaaagtataactcataaat 42452689  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    ||||||| |||||||||| ||||||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42452688 ttggaacaaataccacaccgaagatacattttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 42452589  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42452588 tcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 42452489  T
Q  300 aatattctccatccatcaaattttgagtcatactacaacaat 341  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  42452488 aatattcttcatccatcaaattttaagtcatactacaacaat 42452447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 42923763 - 42924094
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||| ||||||||||||||||||||| |||||||||  ||||| |||||   |||| ||||||||||||||||||||||  ||||||||||||||    
T  42923763 gttgttgccattctaaacccttgtttcagcctcctctatct--ctcaaggtttactatgattcaaggtctatatttatagtaaaagtataactcataaat 42923860  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    |||||||||| |||    |||||||||          |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  42923861 ttggaacgaacacc----tgaagatacttatttgtt-ctccttcagtgaaagaatatttgcatcaaaaatataatatttcttttcaaaatatatttgcat 42923955  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42923956 caaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 42924055  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42924056 atattctccatccatcaaattttgagtcatactacaaca 42924094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 57 - 339
Target Start/End: Original strand, 27583632 - 27583907
Alignment:
Q  57 ctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaat 155  Q
    |||||||||| |||||||||||||  || ||||||||||||||||||||||| ||| ||| ||||||||||           ||||||||||||||||||    
T  27583632 ctgatacaagatctatatttatagagaa-atataactcataaatttggaacggatatcacgctgaagatacatttcttttttctccttcagtgaaagaat 27583730  T
Q  156 atttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttc 255  Q
    ||||||||||||       |||||  ||||||||||||||||||||||||  |  |||||| | || ||||||||||||||||| ||||||||||| |||    
T  27583731 atttgcatcaaa-------tattccttttcaaaatatatttgcatcaaatattccttcatatggtataaaaatatatttattgttcataaatatatcttc 27583823  T
Q  256 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  27583824 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaaatttgagtcatactacaaca 27583907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 138 - 329
Target Start/End: Original strand, 28568556 - 28568740
Alignment:
Q  138 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttatt 237  Q
    ||||||| |||||||||||| |||||||||       ||||| |||||||||||||||||||||||||| |  |||| ||||||||||||||||||||||    
T  28568556 ctccttcggtgaaagaatatatgcatcaaa-------tattccctttcaaaatatatttgcatcaaatcttccttcacacgatacaaaaatatatttatt 28568648  T
Q  238 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  28568649 gtccataaatatattttcaaaacaaaatatatttgaaacaaatcttttatagttttagcaacaatattcttcatctatcaaattttgagtca 28568740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 211 - 342
Target Start/End: Original strand, 27136369 - 27136508
Alignment:
Q  211 ttcatacgatacaaaaatatatttattgtccataaatat--------attttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaat 302  Q
    |||||||| |||||||||||||||||| |||||||||||        ||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  27136369 ttcatacggtacaaaaatatatttattttccataaatatatttatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaccaat 27136468  T
Q  303 attctccatccatcaaattttgagtcatactacaacaata 342  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  27136469 attcttcatccatcaaattttgagtcatactacaacaata 27136508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 332
Target Start/End: Original strand, 34575608 - 34575696
Alignment:
Q  244 aaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatac 332  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34575608 aaatatattttcagcacaaaatatatttagaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatac 34575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 181 - 329
Target Start/End: Complemental strand, 15693747 - 15693583
Alignment:
Q  181 ctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttc-----------------agcacaaa 263  Q
    |||| ||||||||||||||||||||| |  |||||||| ||||||||||||||||||| ||||||||||||||||                 ||||||||    
T  15693747 ctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgcccataaatatattttcagcaacaagtttttggaagcacaaa 15693648  T
Q  264 atatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    |||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| |||||    
T  15693647 atatatttgaaacaaatc-tttatatttttagcaacaatattattcatccatcaaattttaagtca 15693583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21520947 - 21521028
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||| |||||||||||||||    
T  21520947 gttgttgcctttctaaacccttgtttcagccccatctatc--tctcaaagtttagtctgatacaaggtttatatttatagtaaa 21521028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6264399 - 6264483
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatat 89  Q
    ||||||||||||||||||| ||||||||||||||||||    ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  6264399 gttgttgcctttctaaacctttgtttcagccccctcta----tctcaaagtttagtctgatacaaggtctatatttatagtaaaaatat 6264483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 40032312 - 40032391
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  40032312 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaagtttactctgatacaaggtctatatttatagtaaa 40032391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 28568411 - 28568346
Alignment:
Q  264 atatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  28568411 atatatttgaaacaaatcttttatatttttaacaacaatattcttcatccatcaaattttgagtca 28568346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5377683 - 5377763
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||   |||| ||||||||||||||||||||    
T  5377683 gttgttgcctttctaaacccttgtttcagtcccctctatctctctcaaagtttgctctgaaacaaggtctatatttatagt 5377763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24162466 - 24162545
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||   ||||||||||||||||||||||||||||    
T  24162466 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaagtttgctctgatacaaggtctatatttatagtaaa 24162545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 41303549 - 41303623
Alignment:
Q  256 agcacaaaatatatttgaaacaaatcttttata-tttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||| |||||||    
T  41303549 agcacaaaatatatttgaaacaaatcttttatattttttagcaacaatcttcttcatccatcaaattctgagtca 41303623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 39287042 - 39286971
Alignment:
Q  188 aatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    ||||||||||||||||||| | ||||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  39287042 aatatatttgcatcaaatcttcattcatatggtacaaaaatatatttattgtccataaatatattttaagca 39286971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13910298 - 13910377
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   ||||||||||||||||||||||||||||    
T  13910298 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 13910377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19504599 - 19504678
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   ||||||||||||||||||||||||||||    
T  19504599 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 19504678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22163201 - 22163280
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||| ||||||||||||||||    ||||||||||||||||  ||||||||| ||||||||||||||||||    
T  22163201 gttgttgcctttctaaatccttgtttcagccccc----tctatctcaaagtttacactgatacaatgtctatatttatagtaaa 22163280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 27104800 - 27104721
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||| ||||||||||||||||||||||    ||||||||||||   ||||||||||||||||||||||||||||    
T  27104800 gttgttgcctttctgaacccttgtttcagccccctct----atctcaaagttttctctgatacaaggtctatatttatagtaaa 27104721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22287590 - 22287669
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    | ||||||||||||||   | |||||||||||||||||||||||||    
T  22287590 gttgttgcctttctaaacccttgtttcagccccc----tatatctcaaagtttactttaatacaaggtctatatttatagtaaa 22287669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22407663 - 22407742
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||| |||    | ||||||| ||||||  ||||||||||||||||||||||||||||    
T  22407663 gttgttgcctttctaaacccttgtttcagcaccc----tatatctcacagtttactctgatacaaggtctatatttatagtaaa 22407742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31733019 - 31733098
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||| |||||  ||| ||||| ||||||||||||||||||    
T  31733019 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaatgtttactctgttacaaagtctatatttatagtaaa 31733098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 42064516 - 42064437
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||| ||||||||||    | ||||||   ||||||||||||||||||||||||||||    
T  42064516 gttgttgcctttctaaacccttgtttcagctccctctatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 42064437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 6259070 - 6259148
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||| ||||||||| || ||||||    ||||||||||||| || |||||||||||||||||||||||||    
T  6259070 ttgttgcctttctaaactcttgtttcatcctcctcta----tctcaaagtttagtctaatacaaggtctatatttatagtaaa 6259148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 7502715 - 7502638
Alignment:
Q  181 ctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagc 258  Q
    |||| ||||||||||||||||||||| |   |||||| |||||||||||| |||||||| ||||||||||||||||||    
T  7502715 ctttaaaaatatatttgcatcaaatcttctgtcatacaatacaaaaatatttttattgttcataaatatattttcagc 7502638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 19007641 - 19007562
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    ||| |||||   |||||||| | ||||||||||||||||    
T  19007641 gttgttgcctttctaaacccttgtttcagccccctctatct----caaggtttactatgatacaaagcctatatttatagtaaa 19007562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19502265 - 19502344
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||| |||||||||||||||| |||||    | ||||||   ||||||||||||||||||||||||||||    
T  19502265 gttgttgcctttctaaactcttgtttcagccccctttatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 19502344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 18800565 - 18800635
Alignment:
Q  10 tttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||| |||||    | | ||||| |||||||||||||||||||||||||||||    
T  18800565 tttctaaacccttgtttcagccccctatatct----ccatgtttaccctgatacaaggtctatatttatagtaaa 18800635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38020203 - 38020163
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38020203 gttgttgcctttctaaacccttgtttcagccccctctatct 38020163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 325
Target Start/End: Complemental strand, 39286952 - 39286892
Alignment:
Q  261 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttga 325  Q
    ||||||||||||||||||||| |||||||||||||||||||| |    |||||||||||||||||    
T  39286952 aaaatatatttgaaacaaatcatttatatttttagcaacaatct----catccatcaaattttga 39286892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 41303456 - 41303535
Alignment:
Q  180 tctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    ||||| |||||||||||| ||||| || |  |||| ||| ||||||| |||||||| |||||||||||||||||||||||    
T  41303456 tctttaaaaatatatttgaatcaattcttccttcacacggtacaaaattatatttactgtccataaatatattttcagca 41303535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 11739814 - 11739893
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| ||||||||||||||||| ||||||||    |||||||||| |||||  || |||||| ||||||||||||||||||    
T  11739814 gttgttgtctttctaaacccttgttccagccccc----tctatctcaaggtttacactaatacaatgtctatatttatagtaaa 11739893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 17849110 - 17849039
Alignment:
Q  9 ctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||    ||||||| |||||  ||||||||| || |||||||||||||||    
T  17849110 ctttctaaacccttgtttcagccccctct----atctcaaggtttacactgatacaatgtttatatttatagtaaa 17849039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 28196638 - 28196559
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||| |||||||||||||||||    ||||||| |||||  ||||||||| |  |||||||||||||||    
T  28196638 gttgttgcctttctaaacctttgtttcagccccctct----atctcaatgtttactctgatacaaagcatatatttatagtaaa 28196559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 41304807 - 41304884
Alignment:
Q  181 ctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||||||||||| | |||||||||||||| ||||||    
T  41304807 ctttaaaaatatatttgcatcaaatcttccttcatatg-tacaaaaatatatttactatccataaatatattgtcagca 41304884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43623822 - 43623901
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||| |||||||| ||||||||||||  |    ||||||  |||||||||||||||| |||||||||||    
T  43623822 gttgttgcctttctaaaccattgtttcacccccctctatctccc----agtttactctgatacaaggtctatttttatagtaaa 43623901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 45280248 - 45280315
Alignment:
Q  10 tttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||||||||||||||||||||    |||||||||||||||   |||||||||||| ||||||||||||    
T  45280248 tttctaaacccttgtttcagccccc----tctatctcaaagtttgctctgatacaaggtatatatttatagt 45280315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3022164 - 3022086
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaa 83  Q
    |||||||||||| |||||||||||||||||| ||    | |||||||| |||||  ||||||||| |||||||||||||||||    
T  3022164 gttgttgcctttataaacccttgtttcagcctcc----tatatctcaaggtttactctgatacaaagtctatatttatagtaa 3022086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 34575528 - 34575588
Alignment:
Q  138 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaat 205  Q
    ||||||||||||||||||||||||||||       ||||||| |||||||||||||||||||||||||    
T  34575528 ctccttcagtgaaagaatatttgcatca-------aatattccctttcaaaatatatttgcatcaaat 34575588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 37963190 - 37963260
Alignment:
Q  10 tttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||    |||||||||| |||||  || |||||| ||||||||||||||||||    
T  37963190 tttctaaacccttgtttcagccccc----tctatctcaaggtttactcttatacaaagtctatatttatagtaaa 37963260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 11578368 - 11578437
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||| ||||||||    |||  |||| ||||||| |||||||||||||||||||||    
T  11578368 ttctaaacccttgtttcagcccactctatct----caagatttaccctgatataaggtctatatttatagtaaa 11578437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 326
Target Start/End: Complemental strand, 7502633 - 7502582
Alignment:
Q  275 acaaatcttttatatttttagcaacaatattctccatccatcaaattttgag 326  Q
    |||||||||||||| ||| ||||||||| |||| ||||||||||||||||||    
T  7502633 acaaatcttttatactttgagcaacaatcttcttcatccatcaaattttgag 7502582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 15539729 - 15539808
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| | |||||||||||||||||| |||||| |||||    ||| |||||  ||||||||| ||||||||||||||||||    
T  15539729 gttgttgtcattctaaacccttgtttcaaccccctatatct----caaggtttacactgatacaatgtctatatttatagtaaa 15539808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 38020144 - 38020065
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||| || ||||||||||||    | | |||||  | ||||||| ||||||||||||||||||    
T  38020144 gttgttgcctttctaaacccttgttccaaccccctctatct----ccaggtttacaccgatacaatgtctatatttatagtaaa 38020065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 41304898 - 41304964
Alignment:
Q  256 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    ||||||||||||||||||  |||||||||||||||||||     ||| |||| |||||||||||||||||||||    
T  41304898 agcacaaaatatatttga--caaatcttttatattttta-----aatcttcttcatccatcaaattttgagtca 41304964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 20147055 - 20147104
Alignment:
Q  58 tgatacaaggtctatatttatagtaaacatataactcataaatttggaac 107  Q
    ||||||||||||||||||||||||||| ||||  |||||||| |||||||    
T  20147055 tgatacaaggtctatatttatagtaaaaatattcctcataaaattggaac 20147104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 45239238 - 45239314
Alignment:
Q  9 ctttctaaacccttgtttcagccccctctatctatctcaaagttta-gcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| | ||||||||||||||||||||| |||||| |||||   |||||  | |||||||||||||||||||    
T  45239238 ctttctaaatcattgtttcagccccctctatctctctcaaggtttacatctgatgaatggtctatatttatagtaaa 45239314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 41
Target Start/End: Complemental strand, 22874134 - 22874103
Alignment:
Q  10 tttctaaacccttgtttcagccccctctatct 41  Q
    ||||||||||||||||||||||||||||||||    
T  22874134 tttctaaacccttgtttcagccccctctatct 22874103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 34979834 - 34979906
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttat 78  Q
    ||||| ||||||||||| ||||||||||||||||||||||    ||| |||||  || |||||| ||||||||||||    
T  34979834 ttgttacctttctaaacgcttgtttcagccccctctatct----caaggtttacactaatacaatgtctatatttat 34979906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14837274 - 14837195
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| |||| | ||||||||||||||| ||||||||||    ||| |||||  ||||||||| ||||||||||| ||||||    
T  14837274 gttgttgtcttttttaacccttgtttcagctccctctatct----caaggtttacactgatacaatgtctatatttacagtaaa 14837195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 12342673 - 12342743
Alignment:
Q  11 ttctaaaccctt-gtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||| |||||||||||||||||||    ||| |||||  ||||||||| || |||||||||||||||    
T  12342673 ttctaaaccctttgtttcagccccctctatct----caaggtttactctgatacaatgtgtatatttatagtaaa 12342743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 20146914 - 20146955
Alignment:
Q  58 tgatacaaggtctatatttatagtaaacatataactcataaa 99  Q
    ||||||||||||||||||||||||||| ||||  ||||||||    
T  20146914 tgatacaaggtctatatttatagtaaaaatatccctcataaa 20146955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17848444 - 17848404
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    ||||||| ||||||||||||| |||| ||||||||||||||    
T  17848444 gttgttgtctttctaaaccctcgtttgagccccctctatct 17848404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 262; Significance: 1e-146; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 22132644 - 22132987
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagcccc-----ctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactca 95  Q
    |||||||||||||||||||||||||||||||||     |||| ||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  22132644 gttgttgcctttctaaacccttgtttcagcccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactca 22132743  T
Q  96 taaatttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatt 195  Q
    |||||||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22132744 taaatttggaacaaataccacactgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatt 22132843  T
Q  196 tgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttag 295  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22132844 tgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttag 22132943  T
Q  296 caacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  22132944 caacaatattctccatccatcaaattttgaatcatactacaaca 22132987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 24348297 - 24347958
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||    
T  24348297 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcttgatacaaggtctatatttatagtaaaagtataactcataaat 24348198  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    ||||||| ||||||||| |||||||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24348197 ttggaacaaataccacattgaagatactttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 24348098  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24348097 tcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttc-gcacaaaatatatttgaaacaaatcttttatatttttagcaac 24347999  T
Q  300 aatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24347998 aatattctccatccatcaaattttgagtcatactacaacaa 24347958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 14787685 - 14788021
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||    
T  14787685 gttgttgccattctaaacccttgtttcagccccctctatct--ctcaaagtttagtatgatacaaggtctatatttatagtaaaagtataactcataaat 14787782  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14787783 ttggaacgaataccacactgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 14787882  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14787883 caaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatatttttagcaaca 14787982  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
     ||||||||||||||||||||||||||||||||||||||    
T  14787983 ttattctccatccatcaaattttgagtcatactacaaca 14788021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 17662488 - 17662827
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||  ||||||||||||||    
T  17662488 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataaat 17662587  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17662588 ttggaacaaataccacactgaagatacttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 17662687  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17662688 caaatcgttcttcgtacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatatttttagcaaca 17662787  T
Q  301 atattctccatccatcaaattttgagtcatactacaacaa 340  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  17662788 atattctccatccatcaaatttgtagtcatactacaacaa 17662827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 22134869 - 22135219
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagcccc-----------ctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatat 89  Q
    |||||||||||||||||||||||||||||||||           |||| ||| |||||||||||||| |||||||||||||||||||||||||||  |||    
T  22134869 gttgttgcctttctaaacccttgtttcagcccctctatctctctctctctctctctcaaagtttagcttgatacaaggtctatatttatagtaaaagtat 22134968  T
Q  90 aactcataaatttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaa 188  Q
    |||||||||||||||||| |||||||||||||||||||           ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  22134969 aactcataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgaatcaaaaatataatattccctttcaaa 22135068  T
Q  189 atatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 288  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22135069 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 22135168  T
Q  289 tttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22135169 tttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 22135219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 56030523 - 56030184
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | ||||||||||||||||||||||| |||||||    ||| |||||  ||||||||| | |||||||||||||||| |||||||||||||||    
T  56030523 gttgttgtcattctaaacccttgtttcagccccttctatct----caaggtttactctgatacaaagcctatatttatagtaaaaatataactcataaat 56030428  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    |||||| ||||||||||| ||||||||          ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  56030427 ttggaaagaataccacaccgaagatacttttttttttctccttcagtgaaagaatatttgcaccaaaaatataatattccctttcaaaatatatttgcat 56030328  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56030327 caaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 56030228  T
Q  301 atattctccatccatcaaattttgagtcatactacaacaatatg 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  56030227 atattctccatccatcaaattttgagtcatactacaacaatatg 56030184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 5101076 - 5100743
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | ||||||||| ||||||||| |||||||||||    ||| ||||| |||||| ||||||||||||||||||||||  ||||||||||||||    
T  5101076 gttgttgtcattctaaacctttgtttcagtcccctctatct----caaggtttaccctgattcaaggtctatatttatagtaaaagtataactcataaat 5100981  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||||||||||| | |||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5100980 ttggaacgaataccagattgaagatacgtttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 5100882  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5100881 caaatcgttcttcatacggtacaaaaatatatttgttgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatatttttagcaaca 5100782  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5100781 atattctccatccatcaaattttgagtcatactacaaca 5100743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 44600092 - 44600430
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||    ||||||||    | |||||||||||||||||||||||||  ||||||||||||||    
T  44600092 gttgttgcttttctaaacccttgtttcagccccctctatct----caaagtttgctttaatacaaggtctatatttatagtaaaagtataactcataaat 44600187  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    ||| ||| ||||||||||||||||| |            |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  44600188 ttgaaacaaataccacactgaagattcgttttttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattcccttttaaaatatatttgc 44600287  T
Q  199 atcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 298  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44600288 atcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaa 44600387  T
Q  299 caatattctccatccatcaaattttgagtcatactacaacaat 341  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  44600388 caatattctccatccatcaatttttgagtcatactacaacaat 44600430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 58 - 323
Target Start/End: Complemental strand, 30136596 - 30136331
Alignment:
Q  58 tgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaata 156  Q
    |||||| |||| |||||||||||  || |||||||| |||||||| ||||||||| ||||||||||||||           |||||||| ||||||||||    
T  30136596 tgatactaggtatatatttatagagaa-atataactaataaatttagaacgaatatcacactgaagatacgttttttttttctccttcaatgaaagaata 30136498  T
Q  157 tttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttca 256  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||    
T  30136497 tttgaatcaaaaatataatattctcttttaaaatatatttgcatcaaatcgttcttcatacagtacaaaaatatatttattgtccataaatatattttca 30136398  T
Q  257 gcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 323  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30136397 gcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccattcatcaaatttt 30136331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 189 - 342
Target Start/End: Original strand, 47211158 - 47211311
Alignment:
Q  189 atatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 288  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47211158 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttgagcacaaaatatatttgaaacaaatcttttata 47211257  T
Q  289 tttttagcaacaatattctccatccatcaaattttgagtcatactacaacaata 342  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47211258 tttttagcaacaatattctccatccatcaaattttaagtcatactacaacaata 47211311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 53405209 - 53405000
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  53405209 gttgttgcctttctaaacccttgtttcagcccc-tctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 53405111  T
Q  101 ttggaacgaataccacactgaagatac--nnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    ||||||| |||||||||||||| ||||            |||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  53405110 ttggaacaaataccacactgaaaatacgtttttttttttctcctttagtgaaagaatatttgcatcaaaaatataatttttcctttcaaaatatatttgc 53405011  T
Q  199 atcaaatcgtt 209  Q
    |||||||||||    
T  53405010 atcaaatcgtt 53405000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 138 - 340
Target Start/End: Original strand, 38890517 - 38890702
Alignment:
Q  138 ctccttcagtgaaagaatatttgcatcaaaaatataatatt-ctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttat 236  Q
    |||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  38890517 ctcctttagtgaaagaatatttgcatcaaaaatataatatttccctttcaaaatatatttgcatcaaatcgtccttcatacaatacaaaaatatatttat 38890616  T
Q  237 tgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactaca 336  Q
    ||||||||                  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38890617 tgtccata------------------aatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatgctaca 38890698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 57 - 339
Target Start/End: Complemental strand, 10112898 - 10112626
Alignment:
Q  57 ctgatacaaggtctatatttatagtaaaca-tataactcataaatttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaa 154  Q
    ||||||||| |||||||||||||  ||| | |||||||||||||||||||||| ||  ||| ||||||||||           |||||| ||||||| ||    
T  10112898 ctgatacaatgtctatatttataaaaaaaaatataactcataaatttggaacggatttcacgctgaagatacattttttttttctcctttagtgaaataa 10112799  T
Q  155 tatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatatttt 254  Q
    |||||||||||||       |||||||||||||| ||||||| ||||||||| |  |||||||||||||||||||||||||||||||||||||||| |||    
T  10112798 tatttgcatcaaa-------tattctctttcaaa-tatatttacatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatagttt 10112707  T
Q  255 cagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||    ||||||||||||||||||||||||||| ||| || |||||||| |||||||||||||||    
T  10112706 cagcacaaaatatatttgaaac----cttttatatttttagcaacaatattcttcattcaacaaattttaagtcatactacaaca 10112626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 139 - 340
Target Start/End: Complemental strand, 9022252 - 9022059
Alignment:
Q  139 tccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattg 238  Q
    ||||| |||||||||||||||||||||||       ||||| |||| ||||||||||||||||||||| || |||||||| || ||||||||||||||||    
T  9022252 tcctttagtgaaagaatatttgcatcaaa-------tattcccttttaaaatatatttgcatcaaatctttcttcatacggtagaaaaatatatttattg 9022160  T
Q  239 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 338  Q
    || |||||||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||   ||||||| ||||||||| ||||||||||||    
T  9022159 tc-ataaatatattttcagcaaaaaatatatttgaaacaaatcatttatattttcaacaacaatatttctcatccataaaattttgaatcatactacaac 9022061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 47210994 - 47211122
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatcta--tctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  47210994 gttgttgcctttctaaacccttgtttcagccccctctatctccctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataa 47211093  T
Q  99 atttggaacgaataccacactgaagatac 127  Q
    ||||||||| |||||||||||||||||||    
T  47211094 atttggaacaaataccacactgaagatac 47211122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18709417 - 18709547
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc----aaagtttagcctgatacaaggtctatatttatagtaaacatataactcat 96  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    |||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  18709417 gttgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagtataactcat 18709516  T
Q  97 aaatttggaacgaataccacactgaagatac 127  Q
    ||||||||||| |||||||||||||||||||    
T  18709517 aaatttggaacaaataccacactgaagatac 18709547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 19322766 - 19322547
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaa 110  Q
    |||||||||||||||||| ||||||||||||    ||| |||||  |||||||||| |||||||||||||   | ||||||||||||||||||||| |||    
T  19322766 ttctaaacccttgtttcatccccctctatct----caaggtttactctgatacaagatctatatttatagatga-atataactcataaatttggaatgaa 19322672  T
Q  111 taccacactgaagatacnnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcg 207  Q
    || |||| |||||||||             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19322671 tatcacattgaagatacatttcttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcg 19322572  T
Q  208 ttattcatacgatacaaaaatatat 232  Q
    |  || ||||  |||||||||||||    
T  19322571 tcctttatacagtacaaaaatatat 19322547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 185 - 339
Target Start/End: Complemental strand, 9863650 - 9863499
Alignment:
Q  185 caaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttt 284  Q
    |||||||||||||||||||||| |  ||||| |   ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||    
T  9863650 caaaatatatttgcatcaaatcttccttcatgc---acaaaaatatatttattgttcataaatatatttttagcacaaaatatgtttgaaacaaatcatt 9863554  T
Q  285 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||| ||||||||  | |||||| |||||||||||||||| |||||||    
T  9863553 tatatttttagtaacaatatatttcatccaacaaattttgagtcatattacaaca 9863499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 238 - 337
Target Start/End: Complemental strand, 19322510 - 19322410
Alignment:
Q  238 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagc-aacaatattctccatccatcaaattttgagtcatactaca 336  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  19322510 gtccataaatatattttcagtataaaatatatttaaaacaaatcttttatatttttagcaaaaaatattctccatccatcaaattttgagtcatactaca 19322411  T
Q  337 a 337  Q
    |    
T  19322410 a 19322410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 37089625 - 37089707
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  37089625 gttgttgccattctaaacccttgtttcagccccctctatctctctc-aagtttagcctgatacaaggtctatatttatagtaaa 37089707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 268 - 339
Target Start/End: Original strand, 14789500 - 14789571
Alignment:
Q  268 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  14789500 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaaca 14789571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 47274806 - 47274727
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||||||    
T  47274806 gttgttgcctttctaaacccttgtttcagccccctctatct----caaagtttagtctgatacaaggtctatatttatagtaaa 47274727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 36919839 - 36919920
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||||||||||  ||||||||||||||||||||||||||||    
T  36919839 gttgttgcctttctaaacccttgtttcagccccctatatcta--tcaaagtttactctgatacaaggtctatatttatagtaaa 36919920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5637719 - 5637802
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||   || |||||||||||||||||||||||||    
T  5637719 gttgttgcctttctaaactcttgtttcagccccctctatctctctcaaagtttgctcttatacaaggtctatatttatagtaaa 5637802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 11008820 - 11008903
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  |   ||||||||||||||||||||||||||||||||    
T  11008820 gttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaaatagcctgatacaaggtctatatttatagtaaa 11008903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 38209186 - 38209259
Alignment:
Q  256 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  38209186 agcacaaaatatatttaaaacaaatcttttatatttttaacaacaatatttttcatccatcaaattttgagtca 38209259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8631673 - 8631753
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    |||||||| |||||||||||||||    
T  8631673 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaagtctatatttatagt 8631753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 11006491 - 11006574
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  |   ||| ||||||||||||||||||||||||||||    
T  11006491 gttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaaatagtctgatacaaggtctatatttatagtaaa 11006574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 5198499 - 5198420
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||   ||||||||||||||||||||||||||||    
T  5198499 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaagtttgctctgatacaaggtctatatttatagtaaa 5198420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22802988 - 22803067
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| ||||||||||||||||||||||||||||    ||||||||||||  ||||||||||||||||||||||||||||    
T  22802988 gttgttgccattctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaaggtctatatttatagtaaa 22803067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 48486398 - 48486319
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| |||||||||||||||||||||||||||||||    |||||||||  ||||||||||||||||||||||||||||    
T  48486398 gttgttgccattctaaacccttgtttcagccccctctatct----caaagtttactctgatacaaggtctatatttatagtaaa 48486319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 54929107 - 54929180
Alignment:
Q  186 aaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    ||||||||||||||||||||| |  |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  54929107 aaaatatatttgcatcaaatcttccttcatacggtacaaaaatatattttttgtccataaatatattttcagca 54929180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9148332 - 9148251
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||| ||||||||||||||||  |||||||||||   ||||||||||| ||||||||||||||||    
T  9148332 gttgttgcctttctaaacccttgcttcagccccctctatc--tctcaaagtttgctctgatacaaggcctatatttatagtaaa 9148251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 619701 - 619780
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| |||| |||||||||||||||||||||||||    ||||||||||||  ||||||||||||||||||||||||||||    
T  619701 gttgttgtctttataaacccttgtttcagccccctcta----tctcaaagtttactctgatacaaggtctatatttatagtaaa 619780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 5516771 - 5516833
Alignment:
Q  261 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 323  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||    
T  5516771 aaaatatatttgaaacaattcatttatatttttagcaacaatattctccattcatcaaatttt 5516833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 11435034 - 11434955
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   ||||||||||||||||||||||||||||    
T  11435034 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 11434955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22801116 - 22801195
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| | ||||||||||||||||||||||||||||    ||||||||||||  ||||||||||||||||||||||||||||    
T  22801116 gttgttgtcattctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaaggtctatatttatagtaaa 22801195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24446833 - 24446912
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  24446833 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaggtttacactgatacaatgtctatatttatagtaaa 24446912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 24888875 - 24888796
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||||| |    ||||||   ||||||||||||||||||||||||||||    
T  24888875 gttgttgcctttctaaacccttgtttcagccccctctatctct----aagtttgctctgatacaaggtctatatttatagtaaa 24888796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 38409284 - 38409199
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct--atctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||| |||||| |||||||||||||||||||||   |||||||||||   ||||||||||||||||||||||||||||    
T  38409284 gttgttgcctttttaaaccattgtttcagccccctctatctccctctcaaagtttgctctgatacaaggtctatatttatagtaaa 38409199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 40091669 - 40091748
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| ||||||||||||||||||||||||||    ||||||||||||||||   |||||||||||||||||||||||||||    
T  40091669 gttgttgtctttctaaacccttgtttcagccccc----tctatctcaaagtttactttgatacaaggtctatatttatagtaaa 40091748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 36921748 - 36921828
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||| ||||||||||| ||||||||||||  |||||||||||  |||||||||||||||||||||| |||||    
T  36921748 gttgttgcctttctaagcccttgtttca-ccccctctatct--ctcaaagtttactctgatacaaggtctatatttattgtaaa 36921828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6764918 - 6764842
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||||||||||||||||||||||||||||     |||||||||||||||   |||||||||||||||||||||||||    
T  6764918 gttgttgcctttctaaacccttgtttcagcccc----ttctatctcaaagtttgctctgatacaaggtctatatttatagt 6764842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40637153 - 40637077
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   |||||||||||||||||||||||||    
T  40637153 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaaggtctatatttatagt 40637077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 52942700 - 52942777
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctg--atacaaggtctatatttatagt 81  Q
    |||||||||||||||||||||||||||||||||     ||||||||||||||||| |||  ||||||||||||||||||||||    
T  52942700 gttgttgcctttctaaacccttgtttcagcccc-----tctatctcaaagtttagtctgatatacaaggtctatatttatagt 52942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2485126 - 2485203
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||||||||||||||||||||| ||||||||   |||| ||||||||||   |||||||||||||||||||||||||    
T  2485126 gttgttgcctttctaaacccttgttttagccccct---tctagctcaaagtttgctctgatacaaggtctatatttatagt 2485203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 10979754 - 10979676
Alignment:
Q  181 ctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    |||| ||||||||||||||||||||| |  |||||||   |||||||||||||| ||||||||||||||||||||||||    
T  10979754 ctttaaaaatatatttgcatcaaatcttccttcatacagcacaaaaatatatttgttgtccataaatatattttcagca 10979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18847232 - 18847153
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||| ||||||||||||    ||||||||    |||||||||||||||||||||||||||    
T  18847232 gttgttgcctttctaaacccttgtttcaaccccctctatct----caaagtttgttttgatacaaggtctatatttatagtaaa 18847153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22044644 - 22044723
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   ||||||||||| ||||||||||||||||    
T  22044644 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaaggcctatatttatagtaaa 22044723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 36378371 - 36378292
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||     |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  36378371 gttgttgcctttctaaacccttgtttcagcccc----gtctatctcaaggtttattctgatacaaagtctatatttatagtaaa 36378292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 51015325 - 51015246
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   ||||||||| ||||||||||||||||||    
T  51015325 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctctgatacaaagtctatatttatagtaaa 51015246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13544038 - 13543937
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagttta-gcctgatacaaggtctatatttatagtaaacatataactcataaa 99  Q
    ||||||| | ||||| | ||||||||||||||||||||||| ||||||||||||   |||||||||| ||||||||||||||||| | ||  ||||||||    
T  13544038 gttgttgtcattctagatccttgtttcagccccctctatctctctcaaagtttacatctgatacaagatctatatttatagtaaaaacatccctcataaa 13543939  T
Q  100 tt 101  Q
    ||    
T  13543938 tt 13543937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 38270240 - 38270319
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||   ||||| |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  38270240 gttgttgcctttctaaacccttgtttcag---cctct-tctatctcaaggtttacactgatacaatgtctatatttatagtaaa 38270319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 7941400 - 7941319
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||   ||||   ||||||||| ||||||||||||||||||    
T  7941400 gttgttgcctttctaaacccttgtttcagccccctctatc--tctcccggtttgctctgatacaacgtctatatttatagtaaa 7941319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14633398 - 14633323
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||||||||||||| ||||||||||||      ||||||||||||||||  |||||||||||||||||||||||||    
T  14633398 gttgttgcctttctaaacctttgtttcagccct-----tctatctcaaagtttactctgatacaaggtctatatttatagt 14633323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9174400 - 9174479
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||||||||||||||||||||||||||    | ||||||    |||||||||||||||||||||||||||    
T  9174400 gttgttgcttttctaaacccttgtttcagccccctctatct----ccaagtttgctttgatacaaggtctatatttatagtaaa 9174479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9176728 - 9176807
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||||||||||||||||||||||||||    | ||||||    |||||||||||||||||||||||||||    
T  9176728 gttgttgcttttctaaacccttgtttcagccccctctatct----ccaagtttgctttgatacaaggtctatatttatagtaaa 9176807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16934397 - 16934476
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||||||||| ||||||||||||||||    ||||||||    |||||||||||||||||||||||||||    
T  16934397 gttgttgcttttctaaacccttgtatcagccccctctatct----caaagtttgctttgatacaaggtctatatttatagtaaa 16934476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 19095961 - 19095882
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| | |||||||||||||||||||||||||||    ||||||| |||||  ||||||||| ||||||||||||||||||    
T  19095961 gttgttgtcattctaaacccttgtttcagccccctct----atctcaaggtttacactgatacaatgtctatatttatagtaaa 19095882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22046939 - 22047018
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    | ||||||   | ||||||||| ||||||||||||||||    
T  22046939 gttgttgcctttctaaacccttgtttcagccccctctatct----ccaagtttgctccgatacaaggcctatatttatagtaaa 22047018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 24879068 - 24878989
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| ||||||||||||| |||||||||||||||||||    | |||||||  | ||||||||||||||||||||||||||    
T  24879068 gttgttgtctttctaaaccctagtttcagccccctctatct----ccaagtttactcggatacaaggtctatatttatagtaaa 24878989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3824824 - 3824906
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaag-tttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||||||   ||  ||||||||||||||||||||||||||||    
T  3824824 gttgttgcttttctaaacc--tgtttcagccccctctatctctctcaaagaaatactctgatacaaggtctatatttatagtaaa 3824906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 29609914 - 29609983
Alignment:
Q  256 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttga 325  Q
    |||||||||||||||||||| |||||    ||| |||||||||||||||||| |||||||||||||||||    
T  29609914 agcacaaaatatatttgaaaaaaatcaagaatacttttagcaacaatattcttcatccatcaaattttga 29609983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2891396 - 2891356
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2891396 gttgttgcctttctaaacccttgtttcagccccctctatct 2891356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31849853 - 31849893
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31849853 gttgttgcctttctaaacccttgtttcagccccctctatct 31849893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37313320 - 37313360
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37313320 gttgttgcctttctaaacccttgtttcagccccctctatct 37313360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 33415741 - 33415837
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||| |||||||||||||||||||||||||||    |||||||||| |||||  ||||||||| | |||||||| ||||||| | ||  |||||||||    
T  33415741 gttgttacctttctaaacccttgtttcagccccc----tctatctcaaggtttactctgatacaaagcctatatttgtagtaaaaaaatccctcataaat 33415836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47868480 - 47868404
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||||||||||||||||| ||||||||| ||||||||    | ||||||   |||||||||||||||||||||||||    
T  47868480 gttgttgcctttctaaacccttctttcagccctctctatct----ccaagtttgctctgatacaaggtctatatttatagt 47868404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12396099 - 12396178
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||| |||||||||||||||    ||||||||||| |||||   | |||||| ||||||||||||||||||    
T  12396099 gttgttgcctttctaaatccttgtttcagcccc----atctatctcaaggtttacatttatacaatgtctatatttatagtaaa 12396178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12401061 - 12401140
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||| |||||||||||||||    ||||||||||| |||||   | |||||| ||||||||||||||||||    
T  12401061 gttgttgcctttctaaatccttgtttcagcccc----atctatctcaaggtttacatttatacaatgtctatatttatagtaaa 12401140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16932043 - 16932122
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||||||||| ||||||||||||||||    ||||||||    ||||||||||| |||||||||||||||    
T  16932043 gttgttgcttttctaaacccttgtatcagccccctctatct----caaagtttgctttgatacaaggtttatatttatagtaaa 16932122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22780627 - 22780714
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctcta----tctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||||| |||||||||||||||||    ||| ||||  || ||||| ||||||||||| |||||||||||||||    
T  22780627 gttgttgcttttctaaacccctgtttcagccccctctatctctctctctcttagattagcttgatacaaggtttatatttatagtaaa 22780714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22782992 - 22783079
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctcta----tctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||||| |||||||||||||||||    ||| ||||  || ||||| ||||||||||| |||||||||||||||    
T  22782992 gttgttgcttttctaaacccctgtttcagccccctctatctctctctctcttagattagcttgatacaaggtttatatttatagtaaa 22783079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 24880530 - 24880451
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||| ||||  |||||||||||||    | |||||||  | ||||||||||||||||||||||||||    
T  24880530 gttgttgcctttctaaaccctagtttacgccccctctatct----ccaagtttactccgatacaaggtctatatttatagtaaa 24880451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 38928432 - 38928511
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||| |||||||||||||||    |||||||||| |||||  || |||||| | ||||||||||||||||    
T  38928432 gttgttgcctttctaaactcttgtttcagccccc----tctatctcaaggtttactctaatacaaagcctatatttatagtaaa 38928511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 3937464 - 3937541
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||| |||    |||||||||| |||||  |||||| || ||||||||||||||||||    
T  3937464 ttgttgcctttctaaacccttgtttcagctccc----tctatctcaaggtttactctgata-aaagtctatatttatagtaaa 3937541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16453388 - 16453348
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatct 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  16453388 gttgttgcctttttaaacccttgtttcagccccctctatct 16453348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 54929198 - 54929267
Alignment:
Q  258 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    ||||||||| |||| || |||||||||||||||||||||||||||||| |   ||||||||||||| |||||    
T  54929198 cacaaaatacatttaaatcaaatcttttatatttttagcaacaatattat--ttccatcaaattttaagtca 54929267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 18409601 - 18409679
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||     || |||||||||  |||||  |||||||||  |||||||||||||||||    
T  18409601 gttgttgcctttctaaacccttgtttcagc-----ctctctatctcattgtttacactgatacaaattctatatttatagtaaa 18409679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 18537733 - 18537821
Alignment:
Q  10 tttctaaacccttgttt-cagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatt 101  Q
    ||||||||||||||||| |||||||||||||||    ||| |||||  |||||||||| |||||||||||||||||   || |||||||||||    
T  18537733 tttctaaacccttgttttcagccccctctatct----caatgtttactctgatacaagatctatatttatagtaaaagcatcactcataaatt 18537821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 8756538 - 8756583
Alignment:
Q  39 tctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||    
T  8756538 tctatctcaaggtttactctgatacaaggtctatatttatagtaaa 8756583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 25357713 - 25357637
Alignment:
Q  10 tttctaaacccttgttt-cagcccc-ctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||| ||||||| |||  ||| |||||| |||||   |||||||||||||||||||||||||||    
T  25357713 tttctaaacccttgttttcagcccctctcactctctctcaaggtttactttgatacaaggtctatatttatagtaaa 25357637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41997571 - 41997494
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagta 82  Q
    |||||| ||||||| ||| |||||||||||||||| |||||    ||| |||||  ||||||||| ||||||||||||||||    
T  41997571 gttgtttcctttctgaacacttgtttcagccccctttatct----caaggtttactctgatacaaagtctatatttatagta 41997494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 254
Target Start/End: Original strand, 5516704 - 5516747
Alignment:
Q  211 ttcatacgatacaaaaatatatttattgtccataaatatatttt 254  Q
    ||||||||||| ||||||||||||||| || |||||||||||||    
T  5516704 ttcatacgataaaaaaatatatttattatctataaatatatttt 5516747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 14647175 - 14647214
Alignment:
Q  220 tacaaaaatatatttattgtccataaatatattttcagca 259  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  14647175 tacaaaaatatatttgttgtccatgaatatattttcagca 14647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 15032800 - 15032892
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaac 107  Q
    ||||||||||||||||||||||||| |||||    ||| |||||  ||| ||| | ||||||||||||||||||  |||  |||||||| |||||||    
T  15032800 ttctaaacccttgtttcagccccctttatct----caaggtttactctggtaccaagtctatatttatagtaaaagtatccctcataaaattggaac 15032892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 29609838 - 29609897
Alignment:
Q  197 gcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttca 256  Q
    |||||||||| |  |||||||| |||||||||||||||| | | ||||||||||||||||    
T  29609838 gcatcaaatcttccttcatacggtacaaaaatatatttactcttcataaatatattttca 29609897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6132951 - 6132873
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||| |||||||||| ||||| |||||||||    ||| |||||  | ||||||| ||||||||||||||||||    
T  6132951 gttgttgcctttctgaacccttgtt-cagcctcctctatct----caatgtttacaccgatacaatgtctatatttatagtaaa 6132873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 12102162 - 12102090
Alignment:
Q  10 tttctaaacccttgttt-cagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||| ||||||||    |||||||||| ||||   |||||||||| |||||||||||||||||    
T  12102162 tttctaaacccttgttttcagcccccc---tctatctcaaggttttatctgatacaagatctatatttatagtaaa 12102090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 28453714 - 28453682
Alignment:
Q  57 ctgatacaaggtctatatttatagtaaacatat 89  Q
    |||||||||||||||||||||||||||| ||||    
T  28453714 ctgatacaaggtctatatttatagtaaaaatat 28453682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 254; Significance: 1e-141; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 52045 - 51709
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||    
T  52045 gttgttgccattctaaacccttgtttcagccccctctatct--ctcaaagtttagtatgatacaaggtctatatttatagtaaaagtataactcataaat 51948  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51947 ttggaacgaataccacactgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 51848  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51847 caaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatatttttagcaaca 51748  T
Q  301 atattctccatccatcaaattttgagtcatactacaaca 339  Q
     ||||||||||||||||||||||||||||||||||||||    
T  51747 ttattctccatccatcaaattttgagtcatactacaaca 51709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 268 - 339
Target Start/End: Complemental strand, 50230 - 50159
Alignment:
Q  268 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  50230 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaaca 50159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 183894 - 183969
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||||||||||||| ||||||||||||      ||||||||||||||||  |||||||||||||||||||||||||    
T  183894 gttgttgcctttctaaacctttgtttcagccct-----tctatctcaaagtttactctgatacaaggtctatatttatagt 183969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 170115 - 170076
Alignment:
Q  220 tacaaaaatatatttattgtccataaatatattttcagca 259  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  170115 tacaaaaatatatttgttgtccatgaatatattttcagca 170076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 246; Significance: 1e-136; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 30967261 - 30966923
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||    
T  30967261 gttgttgtctttctaaacccttgtttcagccccctctatctctctcaaagtttagcct-atacaaggtctatatttatagtaaaagtataactcataaat 30967163  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    ||||||| ||||||||||||||||| |           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30967162 ttggaacaaataccacactgaagattcgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcgctttcaaaatatatttgca 30967063  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    | |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30967062 ttaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaac 30966963  T
Q  300 aatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  30966962 aatattctccatccatcaaatttggagtcatactacaaca 30966923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 30034857 - 30035198
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  30034857 gttgttgcctttctaaacccttgttttagctccctctatctctcttaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaat 30034956  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    ||||||| |||| |||| |||||||||           |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  30034957 ttggaacaaatatcacattgaagatacgtttttattttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaatatatttgca 30035056  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    | |||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30035057 ttaaatcgttcttcatacgatacaaaaatatatttattgtctataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaac 30035156  T
Q  300 aatattctccatccatcaaattttgagtcatactacaacaat 341  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30035157 aatattctccatccatcaaattttgagtcatactacaacaat 30035198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 2629139 - 2629479
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagcccc-ctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaa 99  Q
    ||||||||||||||||||||||||||||||||| || | ||| |||||||||||| | |||||||||||||||||||||||||||  ||||||| |||||    
T  2629139 gttgttgcctttctaaacccttgtttcagcccctctatctctctctcaaagtttaacatgatacaaggtctatatttatagtaaaagtataactaataaa 2629238  T
Q  100 tttggaacgaataccacactgaagatacnnnnnnnnnnc-tccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    |||||||| ||||| |||||||||||||          | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2629239 tttggaacaaatactacactgaagatacgtttttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgc 2629338  T
Q  199 atcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 298  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2629339 atcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 2629438  T
Q  299 caatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  2629439 caatattcttcttccatcaaattttgagtcatactacaaca 2629479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 12195769 - 12196104
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||    ||||||||    |||||||||||||||||||||||||||  ||||||||||||||    
T  12195769 gttgttgcttttctaaacccttgtttcagccccctctatct----caaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaat 12195864  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgca 199  Q
    ||||||| ||||||||||||||||| |           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12195865 ttggaacaaataccacactgaagattcgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 12195964  T
Q  200 tcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 299  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12195965 tcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaac 12196064  T
Q  300 aatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  12196065 aatattctccatccatcaatttttgagtcatactacaaca 12196104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 19704823 - 19705166
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||  |||||||   ||||||||||||||||||||||||| || |||||||||||||    
T  19704823 gttgttgcctttctaaacccttgtttcagccccctccatctctctctcaaagtttgctctgatacaaggtctatatttatagtgaa-atataactcataa 19704921  T
Q  99 atttggaacgaataccacactgaagatacnnnnnnnnnn---ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatt 195  Q
    |||||||||||||| |||||| |||||||             |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  19704922 atttggaacgaatatcacacttaagatacgtttcttttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatt 19705021  T
Q  196 tgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttag 295  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19705022 tgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgaaacaaatcttttatatttttag 19705121  T
Q  296 caacaatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    |||||||||||| | ||||||||||||||||||||||||||||||    
T  19705122 caacaatattcttcttccatcaaattttgagtcatactacaacaa 19705166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 5 - 340
Target Start/End: Original strand, 26932820 - 26933159
Alignment:
Q  5 ttgcctttctaaacccttgtttcagccccctctatctatctc----aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||| ||||||| ||||||||||| |||||||||||| ||||    |||||||    ||| |||||||||||||||||||| ||  |||||| |||||||    
T  26932820 ttgcttttctaagcccttgtttcaaccccctctatctctctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaat 26932919  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    ||||||| ||||||||||||||||| |          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26932920 ttggaacaaataccacactgaagattcgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 26933019  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26933020 caaatcgttcttcatacgatacaaaaatatatttattgtccataataatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaaca 26933119  T
Q  301 atattctccatccatcaaattttgagtcatactacaacaa 340  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  26933120 atattctccatccatcaatttttgagtcatactacaacaa 26933159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 62 - 340
Target Start/End: Complemental strand, 18318029 - 18317750
Alignment:
Q  62 acaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttg 160  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||    
T  18318029 acaaggtctatatttatagtgaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttg 18317930  T
Q  161 catcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcac 260  Q
    ||| ||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18317929 cataaaaaatataatattccctttcaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcac 18317830  T
Q  261 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  18317829 aaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccttcaaattttgagtcatactacaacaa 18317750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 138 - 344
Target Start/End: Original strand, 5275727 - 5275933
Alignment:
Q  138 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttatt 237  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5275727 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 5275826  T
Q  238 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 337  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5275827 gtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 5275926  T
Q  338 caatatg 344  Q
    || ||||    
T  5275927 cactatg 5275933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 343
Target Start/End: Complemental strand, 17852602 - 17852263
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | |||||||||||||||||||||||||||||||    ||| |||||  ||||| ||| ||||||||||||||||||  ||||||||||||||    
T  17852602 gttgttgtcattctaaacccttgtttcagccccctctatct----caaggtttactctgattcaaagtctatatttatagtaaaagtataactcataaat 17852507  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctcct---tcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttg 197  Q
    |||||||||||||||||| ||||||||          || ||   ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  17852506 ttggaacgaataccacac-gaagatacttttttttttcttctctttcagtgaaataatatttgcatcaaaaatataatattccctttcaaaatatatttg 17852408  T
Q  198 catcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 297  Q
    |||||||| ||| |||||| | |||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  17852407 catcaaatagttcttcataaggtacaaaaatatatttattgtccataaatatattttcagcataaa--atatttgaaacaaatcttttatatttttagca 17852310  T
Q  298 --acaatattctccatccatcaaattttgagtcatactacaacaatat 343  Q
      |||||||||||||| ||||||||||||||||||| | |||||||||    
T  17852309 acacaatattctccat-catcaaattttgagtcatatttcaacaatat 17852263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 39 - 337
Target Start/End: Complemental strand, 17012070 - 17011781
Alignment:
Q  39 tctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacnnnnnnnnnnc 138  Q
    |||||||||| |||||  | ||||||||||||||||||||||  || ||||||||||||||||||||||||| | ||| ||||||||||               
T  17012070 tctatctcaaggtttactccgatacaaggtctatatttatagagaa-atataactcataaatttggaacgaacatcactctgaagatacgttttt----- 17011977  T
Q  139 tccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattg 238  Q
    |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||| |||||||||||||||||||    
T  17011976 tttttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccatcatacggtacaaaaatatatttattg 17011877  T
Q  239 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 337  Q
    |||||||||||||||||  ||||||  |||||| ||||||| |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||    
T  17011876 tccataaatatattttctacacaaa--atatttaaaacaaa-cttttatatttttagcaataatattcttcatccatcaaattttaagtcatactacaa 17011781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 57 - 339
Target Start/End: Original strand, 22858261 - 22858536
Alignment:
Q  57 ctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacnnnnnnnnnn--ctccttcagtgaaagaa 154  Q
    |||||||||||| |||||||||||  || ||||||||||||||||||||||| ||| |||  |||||||||            |||||||| ||||||||    
T  22858261 ctgatacaaggtttatatttatagagaa-atataactcataaatttggaacgtatatcacgttgaagatacgtttctttttttctccttcaatgaaagaa 22858359  T
Q  155 tatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatatttt 254  Q
    ||||||||||||||        ||| ||||||||||||||||||||| |||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  22858360 tatttgcatcaaaa--------ttccctttcaaaatatatttgcatctaatcttctttcatacggtacaaaaatatatttattgtccataaatatatttt 22858451  T
Q  255 cagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||| ||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  22858452 cagcacaaagtatatttaaaacaaatcttttatatttttattaacaatattcttcatccatcaaattttgagtcatactacaaca 22858536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 173 - 337
Target Start/End: Complemental strand, 20526708 - 20526548
Alignment:
Q  173 aatattctctttcaaaa-tatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatattt 271  Q
    ||||||||||||||||| ||||||||||||||||| |  |||||||| ||||||||||||| ||     ||||||||||||||||||| |||||||||||    
T  20526708 aatattctctttcaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatgta-----cataaatatattttcagcataaaatatattt 20526614  T
Q  272 gaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 337  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  20526613 gaaacaaatcttttatatttttagcaacaatattcttcacccatcaaattttgagtcatactacaa 20526548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 20915610 - 20915691
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  20915610 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaa--tttagcctgatacaaggtctatatttatagtaaa 20915691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15532935 - 15533036
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||| |||||||||||||||||||||||||||||||    ||||||||||||| ||||||||||||||||||||||||||||  ||||||| | ||||    
T  15532935 gttgttacctttctaaacccttgtttcagccccctcta----tctcaaagtttagtctgatacaaggtctatatttatagtaaaagtataactta-aaat 15533029  T
Q  101 ttggaac 107  Q
    |||||||    
T  15533030 ttggaac 15533036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 15541398 - 15541473
Alignment:
Q  5 ttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    ||||||||||||| ||||||||||||||||||||||||||||    
T  15541398 ttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttagtctgatacaaggtctatatttatagtaaa 15541473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 317
Target Start/End: Complemental strand, 30445404 - 30445243
Alignment:
Q  173 aatattctctttcaaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttc----------------- 255  Q
    |||||||  ||| ||||||||||||||||||||| |  |||||| | |||||||||||||||||||| |||||||||||||||                     
T  30445404 aatattcctttttaaaatatatttgcatcaaatcttccttcatatggtacaaaaatatatttattgttcataaatatattttcagcaacaatattctgga 30445305  T
Q  256 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatca 317  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  30445304 agcacaaaatatatttgaaacaaatattttatatttctagcaacaatattcttcatccatca 30445243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4816485 - 4816578
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc----------aaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||          ||||||||||||||||||||||||||||||||||||||    
T  4816485 gttgttgcctttctaaacccttgtttcagccccctctatctctctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaa 4816578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24338702 - 24338781
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||| |||||  ||||||||| ||||||||||||||||||    
T  24338702 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaggtttacactgatacaatgtctatatttatagtaaa 24338781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 30443097 - 30443022
Alignment:
Q  256 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc--aaattttgagtca 329  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||  |||||||||||||    
T  30443097 agcaaaaaatatatttgaaacaaatctcttatatttttaacaacaatattcttcatccatcataaattttgagtca 30443022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3390439 - 3390343
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||||||||||||||||||||||||||||     |||||||||| |||||  ||||||||| ||||||||||||||||||  |||  |||||||||    
T  3390439 gttgttgcctttctaaacccttgtttcagcccc----gtctatctcaaggtttatactgatacaatgtctatatttatagtaaaagtatctctcataaat 3390344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28241575 - 28241651
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||||||||||||||||||||||||||||||||||| |    ||||||   |||||||||||||||||||||||||    
T  28241575 gttgttgcctttctaaacccttgtttcagccccctctatctct----aagtttgctctgatacaaggtctatatttatagt 28241651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1072131 - 1072210
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||    |||  ||||||||||||||||  ||||||||| ||||||||||||||||||    
T  1072131 gttgttgcctttctaaacccttgtttcag----ctccttctatctcaaagtttactctgatacaatgtctatatttatagtaaa 1072210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 8995539 - 8995460
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||| |||||||||||||| ||    ||||||  |||||||||| |||||||||||||||||    
T  8995539 gttgttgcctttctaaacccttgttttagccccctctatctctc----agtttactctgatacaagatctatatttatagtaaa 8995460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9019986 - 9019907
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||| |||||||||||||| ||    ||||||  |||||||||| |||||||||||||||||    
T  9019986 gttgttgcctttctaaacccttgttttagccccctctatctctc----agtttactctgatacaagatctatatttatagtaaa 9019907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 13057250 - 13057175
Alignment:
Q  5 ttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||    ||||||| |||||  ||||||||| ||||||||||||||||||    
T  13057250 ttgcctttctaaacccttgtttcagccccctct----atctcaaggtttacactgatacaatgtctatatttatagtaaa 13057175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14507429 - 14507508
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||| |||||||    |||||||||||||||   || |||||||||||||||||||||||||    
T  14507429 gttgttgcctttctaaacccttgttttagccccc----tctatctcaaagtttgctctaatacaaggtctatatttatagtaaa 14507508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25477334 - 25477255
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    ||||||| |||||  ||||||||| ||||||||||| ||||||    
T  25477334 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaggtttacactgatacaatgtctatatttacagtaaa 25477255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 32447570 - 32447649
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||    |||||||||| |||||  ||||||||| | ||||||||||||||||    
T  32447570 gttgttgcctttctaaacccttgtttcagccccc----tctatctcaaggtttactctgatacaaagcctatatttatagtaaa 32447649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 14459019 - 14459093
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttata 79  Q
    |||||||||||||||||||||| |||||||||||    |||||||||||||||   |||||||||||||||||||||||    
T  14459019 gttgttgcctttctaaacccttatttcagccccc----tctatctcaaagtttgctctgatacaaggtctatatttata 14459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 3632192 - 3632272
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaac 85  Q
    |||||||||||||||||||||||||||| | |||    |||||||||| |||||  ||||||||| |||||||||||||||||||    
T  3632192 gttgttgcctttctaaacccttgtttcaactccc----tctatctcaaggtttacactgatacaatgtctatatttatagtaaac 3632272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 11983283 - 11983362
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||| || |||||||||||||||||||||    | ||||||   ||||||||||||||||||||||||||||    
T  11983283 gttgttgcctttctaagcctttgtttcagccccctctatct----ccaagtttgctctgatacaaggtctatatttatagtaaa 11983362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19227662 - 19227741
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||| |||||||    | |||||||||||||   |||||||||| |||||||||||||||||    
T  19227662 gttgttgcctttctaaacccttgtttgagccccc----tttatctcaaagtttgctctgatacaagatctatatttatagtaaa 19227741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26065046 - 26064965
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaag-tttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||| |||   ||   ||||||||||||||||||||||||    
T  26065046 gttgttgccattctaaacccttgtttcagccccctctatctctctccaagaaatactgtgatacaaggtctatatttatagt 26064965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26085015 - 26084934
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaag-tttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||| |||   ||   ||||||||||||||||||||||||    
T  26085015 gttgttgccattctaaacccttgtttcagccccctctatctctctccaagaaatactgtgatacaaggtctatatttatagt 26084934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1230503 - 1230579
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||||||||||||||||||||||| ||| ||||||||    ||||||||    ||||||||||||||||||||||||    
T  1230503 gttgttgcctttctaaacccttgtttcaaccctctctatct----caaagtttgctatgatacaaggtctatatttatagt 1230579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 15530376 - 15530455
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||| |||||| |||||| |||||||||||||||||  |    ||||||  ||||||||||||||||||||||||||||    
T  15530376 gttgttgccattctaagcccttgcttcagccccctctatctccc----agtttactctgatacaaggtctatatttatagtaaa 15530455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30729082 - 30729161
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| ||||| | |||||||||||||||||||||||||    ||| |||||  |||||||||| |||||||||||||||||    
T  30729082 gttgttgtctttcgatacccttgtttcagccccctctatct----caaggtttactctgatacaagatctatatttatagtaaa 30729161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 15346441 - 15346355
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatt 101  Q
    ||||||||||||| |||||||||||||||||    ||| |||||  ||||||||| ||||||||||||||||||  |||  ||||||||||    
T  15346441 ttctaaacccttggttcagccccctctatct----caaggtttacactgatacaatgtctatatttatagtaaaagtatccctcataaatt 15346355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32280056 - 32279982
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatag 80  Q
    |||||||||||| ||||||||||||||||||||     |||||||| |||||||   ||||||||||||||||| |||||    
T  32280056 gttgttgcctttttaaacccttgtttcagcccc-----tctatctccaagtttactatgatacaaggtctatatatatag 32279982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3233985 - 3234063
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| ||||||||| |||||||||||||||||||||||     || |||||  |||||||||| |||||||||||||||||    
T  3233985 gttgttgtctttctaaatccttgtttcagccccctctatctt----aaggtttacactgatacaag-tctatatttatagtaaa 3234063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3630118 - 3630197
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||  ||||||||||||||||||||    |||  ||||   |||||||| ||||||||||||||||||    
T  3630118 gttgttgcctttctaaaccgatgtttcagccccctctatct----caagttttacattgatacaatgtctatatttatagtaaa 3630197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 13039810 - 13039735
Alignment:
Q  5 ttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||| ||    | |||||||| |||||  |||||||||  |||||||||||||||||    
T  13039810 ttgcctttctaaacccttgtttcagcctcc----tatatctcaaggtttacactgatacaatatctatatttatagtaaa 13039735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 30443182 - 30443111
Alignment:
Q  186 aaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagca 259  Q
    |||||| |||||||||||||| |  || ||||| |||||| ||||||||  |||||||||||||||||||||||    
T  30443182 aaaatacatttgcatcaaatcttcctttatacggtacaaacatatattt--tgtccataaatatattttcagca 30443111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 325
Target Start/End: Complemental strand, 12158575 - 12158532
Alignment:
Q  282 ttttatatttttagcaacaatattctccatccatcaaattttga 325  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||    
T  12158575 ttttatatttttagcaacaatcttcttcattcatcaaattttga 12158532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12161809 - 12161887
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||| ||||||||||||||||||||||||     | |||||||| |||||   |||||||| ||||||||||| ||||||    
T  12161809 gttgttgcatttctaaacccttgtttcagcccc-----tttatctcaaggtttacaatgatacaatgtctatatttaaagtaaa 12161887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 41
Target Start/End: Complemental strand, 15719705 - 15719674
Alignment:
Q  10 tttctaaacccttgtttcagccccctctatct 41  Q
    ||||||||||||||||||||||||||||||||    
T  15719705 tttctaaacccttgtttcagccccctctatct 15719674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13870676 - 13870749
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttata 79  Q
    |||||||||||||||||||||| ||||||||||     |||||||||| ||||   ||||||||| | |||||||||||    
T  13870676 gttgttgcctttctaaacccttatttcagcccc-----tctatctcaaggtttgctctgatacaaagcctatatttata 13870749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22490700 - 22490659
Alignment:
Q  1 gttgttgcctttctaaa-cccttgtttcagccccctctatct 41  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  22490700 gttgttgcctttcaaaaacccttgtttcagccccctctatct 22490659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 3833220 - 3833176
Alignment:
Q  261 aaaatatatttgaaacaaatcttttatatttttagcaacaatatt 305  Q
    ||||||||||| |||||||| |||||| |||||||||| ||||||    
T  3833220 aaaatatatttaaaacaaatattttatgtttttagcaataatatt 3833176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 11727 - 12062
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    ||||||| | ||||||| || ||||||||||||||||||||    | | |||||  ||||| ||||||||||||||||||||||  ||||||||||||||    
T  11727 gttgttgtcattctaaatccctgtttcagccccctctatct----ccaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaat 11822  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcat 200  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11823 ttggaacgaataccacactgaagatacgtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 11922  T
Q  201 caaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaca 300  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11923 caaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaattttttatatttttagcaaca 12022  T
Q  301 atattctccatccatcaaattttgagtcatactacaacaa 340  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  12023 atattctccatccatcaaattttgaatcatactacaacaa 12062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 2076 - 1734
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc--aaagtttagcctgatacaaggtctatatttatagtaaacatataactcataa 98  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||    ||| |||||||||||||||||||| ||  ||||||| ||||    
T  2076 gttgttgcctttctaaacccttgtttcagccccctatatctttctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtataacttataa 1977  T
Q  99 atttggaacgaataccacactgaagatacnnnnnnnnnn-ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttg 197  Q
    |||||||||||||||||||||||||||||           |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  1976 atttggaacgaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttg 1877  T
Q  198 catcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 297  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1876 catcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagca 1777  T
Q  298 acaatattctccatccatcaaattttgagtcatactacaacaa 340  Q
    |||||||||| | ||| ||||||||||||||||||||||||||    
T  1776 acaatattcttcttccttcaaattttgagtcatactacaacaa 1734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 79219 - 78883
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||    |||  ||||  ||||| ||||||||||||||||||||||  ||||||||||||||    
T  79219 gttgttgcctttctaaacccttgttttagccccctctatct----caagttttactctgattcaaggtctatatttatagtaaaggtataactcataaat 79124  T
Q  101 ttggaacgaataccacactgaagatacnnnnnnnnnn--ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgc 198  Q
    |||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  79123 ttggaacgaataccacactgaagatacattttttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgc 79024  T
Q  199 atcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaa 298  Q
    ||||||||||| |||||||  |||||||||||||||||| |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||    
T  79023 atcaaatcgttcttcatacagtacaaaaatatatttattatccataaatatatttttagcagaaaatatatttgagacaaatcttttatatttttagcaa 78924  T
Q  299 caatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  78923 caatattctccatccatcaaattttaagtcatactacaaca 78883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 224 - 338
Target Start/End: Original strand, 2070 - 2184
Alignment:
Q  224 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2070 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 2169  T
Q  324 gagtcatactacaac 338  Q
    |||||||||||||||    
T  2170 gagtcatactacaac 2184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 2022 - 2080
Alignment:
Q  138 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2022 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 191 - 339
Target Start/End: Complemental strand, 4694 - 4546
Alignment:
Q  191 atatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 290  Q
    ||||||||||||||| ||  |||||||  ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  4694 atatttgcatcaaattgtccttcatacagtacaaaaatatatatattgtccataaatatattttcagcacgaaatatattcgaaacaaatcttttatatt 4595  T
Q  291 tttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||||    
T  4594 tttagcaacaatattcttcatccatcaaattttgagttatactgcaaca 4546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 4814 - 4727
Alignment:
Q  39 tctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatac 127  Q
    |||||||||| |||||  ||||||||||||||||||||||||  || |||||||||||||||||| |||||||| ||||||||||||||    
T  4814 tctatctcaaggtttactctgatacaaggtctatatttatagagaa-atataactcataaatttgaaacgaatatcacactgaagatac 4727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 245 - 339
Target Start/End: Original strand, 1 - 95
Alignment:
Q  245 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 95  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4031 - 3952
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||||||    
T  4031 gttgttgcctttctaaacccttgtttcagccccctctatct----caaagtttagtctgatacaaggtctatatttatagtaaa 3952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 69545 - 69628
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||| ||||||||||||||| |||||    
T  69545 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatataaggtctatatttattgtaaa 69628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 73277 - 73360
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||||| |||||||||||||||||||    
T  73277 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttcctttgatacacggtctatatttatagtaaa 73360  T

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Target: scaffold0068 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 29205 - 29116
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc------aaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||      ||||||||||||||||||||||||||||||||||||||    
T  29205 gttgttgcctttttaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaa 29116  T

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Target: scaffold0250 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2914 - 2835
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||   |||||||||| |||||||||||||||||    
T  2914 gttgttgcctttctaaacccttgtttcagccccctct----atctcaaagtttgctctgatacaagttctatatttatagtaaa 2835  T

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Target: scaffold0552 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1085 - 1161
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    |||||||||||||||||||||||||||||||||     |||||||||||||||   |||||||||||||||||||||||||    
T  1085 gttgttgcctttctaaacccttgtttcagcccc----ttctatctcaaagtttgctctgatacaaggtctatatttatagt 1161  T

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Target: scaffold0038 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41737 - 41813
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagt 81  Q
    ||||||||||||||||||||||||||||||||||||||||| |    ||||||   |||||||||||||||||||||||||    
T  41737 gttgttgcctttctaaacccttgtttcagccccctctatctct----aagtttgctctgatacaaggtctatatttatagt 41813  T

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Target: scaffold0131 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15053 - 14974
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||||||||||||| | |||||||||||||||||||||    ||||||||   ||||||||||||||||||||||||||||    
T  15053 gttgttgcctttctaaatcattgtttcagccccctctatct----caaagtttgctctgatacaaggtctatatttatagtaaa 14974  T

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Target: scaffold0131; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14636 - 14707
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatat 74  Q
    ||||||| ||||||||||| |||||||| |||||||||||  |||||||||||   || | |||||||||||||    
T  14636 gttgttgtctttctaaaccattgtttcatccccctctatc--tctcaaagtttgctctaaaacaaggtctatat 14707  T

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Target: scaffold0472 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 6232 - 6154
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    ||||||| ||||||||||||||||||||||||||||||||    ||||||||    |||||||||||||||||||||||||||    
T  6232 ttgttgcttttctaaacccttgtttcagccccctctatct----caaagtttgctttgatacaaggtctatatttatagtaaa 6154  T

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Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 57836 - 57905
Alignment:
Q  186 aaaatatatttgcatcaaatcgttattcatacgatacaaaaatatatttattgtccataaatatattttca 256  Q
    ||||||||||||||||||||  || |||||||| |||||||||||||||||||| |||| |||||||||||    
T  57836 aaaatatatttgcatcaaatt-ttcttcatacggtacaaaaatatatttattgttcatacatatattttca 57905  T

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Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 57926 - 57995
Alignment:
Q  258 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    ||||||| |||| | |||||||||||||||| |||||| ||||  ||||  |||||||||||||||||||||    
T  57926 cacaaaaaatatataaaacaaatcttttatacttttagaaaca--attcatcatccatcaaattttgagtca 57995  T

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Target: scaffold0267 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 75 - 30
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagccccctctatctatctc 46  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  75 gttgttgcttttctaaacccttgtttcagccccctctatctctctc 30  T

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Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 79892 - 79814
Alignment:
Q  2 ttgttgcctttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaa 84  Q
    |||||| |||||||||||||||||||||||||||||    ||||||| |||||  |||||||||   ||||||||||||||||    
T  79892 ttgttgtctttctaaacccttgtttcagccccctct----atctcaaggtttacactgatacaaaaactatatttatagtaaa 79814  T

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Target: scaffold0533 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 2232 - 2273
Alignment:
Q  261 aaaatatatttgaaacaaatcttttatatttttagcaacaat 302  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  2232 aaaatatatttgaaacaaatcttttatattttctgcaacaat 2273  T

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Target: scaffold0224 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 16082 - 16174
Alignment:
Q  11 ttctaaacccttgtttcagccccctctatctatctcaaagtttagcctgatacaaggtctatatttatagtaaacatataactcataaatttggaac 107  Q
    |||||||||||| ||||| ||||||||||||     || |||||  |||||||||  |||||||||||||||||  |||  ||||||||||||||||    
T  16082 ttctaaacccttatttcaaccccctctatctt----aaggtttactctgatacaaaatctatatttatagtaaaagtatccctcataaatttggaac 16174  T

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Target: scaffold0474 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 329
Target Start/End: Complemental strand, 10493 - 10443
Alignment:
Q  279 atcttttatatttttagcaacaatattctccatccatcaaattttgagtca 329  Q
    |||||||||||||||| ||||||| || |  ||||||||||||||||||||    
T  10493 atcttttatatttttaacaacaatcttttttatccatcaaattttgagtca 10443  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 35673 - 35644
Alignment:
Q  1 gttgttgcctttctaaacccttgtttcagc 30  Q
    ||||||||||||||||||||||||||||||    
T  35673 gttgttgcctttctaaacccttgtttcagc 35644  T

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