View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3713_low_10 (Length: 293)
Name: NF3713_low_10
Description: NF3713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3713_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 17 - 265
Target Start/End: Complemental strand, 41899755 - 41899507
Alignment:
| Q |
17 |
actctccaccaccacctccaagagtctattgatgcggctaaatcaacttaatttgtttcaatattttgcattacattatcgctatttcatttatatcagg |
116 |
Q |
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| T |
41899755 |
actctccaccacctcctccaagagtctattgatgcggctaaaccaacttaatttgtttcaatattatgcattacattatcgctatttcatttatatcagg |
41899656 |
T |
|
| Q |
117 |
gtctacatcaaagagcattgctatgaatgtagccctattgtatcattttgtttcattctcaattcaaaagtttgttttgttctaaacattcttcgtatta |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41899655 |
gtctacatcaaagagcattgctatgaatgtagccctattgtatcattttgtttcattctcaattcaaaagtttgttttgttctaaacattcttcgtatta |
41899556 |
T |
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| Q |
217 |
tattgtacattggaactgttgttaagtctattctgctcattcgaaagac |
265 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
41899555 |
tattgtatattggaactgttgttaagtctattctgctcattcgaaagac |
41899507 |
T |
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