View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3714_low_7 (Length: 233)

Name: NF3714_low_7
Description: NF3714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3714_low_7
NF3714_low_7
[»] chr3 (59 HSPs)
chr3 (40-138)||(43619168-43619266)
chr3 (181-233)||(6065632-6065684)
chr3 (181-233)||(25533791-25533843)
chr3 (182-233)||(9604447-9604498)
chr3 (181-233)||(10621365-10621417)
chr3 (181-233)||(43226444-43226496)
chr3 (182-233)||(747126-747177)
chr3 (182-233)||(10084229-10084279)
chr3 (182-233)||(38210738-38210789)
chr3 (182-233)||(50494366-50494417)
chr3 (181-230)||(6063282-6063331)
chr3 (176-233)||(28412864-28412921)
chr3 (182-233)||(4308122-4308174)
chr3 (181-233)||(11168469-11168520)
chr3 (182-233)||(10191152-10191202)
chr3 (182-233)||(41849420-41849470)
chr3 (184-233)||(5192018-5192066)
chr3 (181-233)||(18099009-18099062)
chr3 (180-233)||(31151703-31151756)
chr3 (181-233)||(43421259-43421312)
chr3 (181-233)||(456275-456326)
chr3 (181-233)||(458652-458703)
chr3 (197-233)||(5886565-5886601)
chr3 (197-233)||(5900038-5900074)
chr3 (181-233)||(7606442-7606493)
chr3 (181-233)||(10958162-10958213)
chr3 (182-233)||(18096740-18096792)
chr3 (182-233)||(36012191-36012243)
chr3 (193-233)||(43228654-43228694)
chr3 (182-233)||(45883305-45883357)
chr3 (181-229)||(51726846-51726893)
chr3 (182-233)||(53915338-53915390)
chr3 (182-233)||(5522466-5522516)
chr3 (182-233)||(10955867-10955917)
chr3 (182-233)||(22114143-22114193)
chr3 (180-233)||(25389274-25389328)
chr3 (188-233)||(27101028-27101074)
chr3 (199-233)||(53893910-53893944)
chr3 (182-233)||(1313769-1313822)
chr3 (181-233)||(1321846-1321898)
chr3 (200-233)||(38890408-38890441)
chr3 (181-233)||(42990666-42990718)
chr3 (181-233)||(43423307-43423360)
chr3 (181-233)||(53917505-53917558)
chr3 (179-231)||(11170740-11170791)
chr3 (182-233)||(28761287-28761339)
chr3 (184-226)||(47701522-47701565)
chr3 (181-230)||(3859881-3859931)
chr3 (182-220)||(43228695-43228733)
chr3 (181-233)||(3315048-3315101)
chr3 (182-233)||(27635497-27635550)
chr3 (181-233)||(28101847-28101900)
chr3 (182-230)||(35917876-35917925)
chr3 (182-233)||(4103736-4103787)
chr3 (182-233)||(17795617-17795669)
chr3 (182-233)||(19104057-19104109)
chr3 (181-233)||(23633811-23633863)
chr3 (182-233)||(24980074-24980126)
chr3 (198-233)||(28181365-28181401)
[»] chr7 (48 HSPs)
chr7 (177-233)||(11759524-11759580)
chr7 (179-231)||(31153688-31153740)
chr7 (182-233)||(9027034-9027085)
chr7 (183-233)||(28487950-28488000)
chr7 (14-119)||(31540078-31540183)
chr7 (180-233)||(7469862-7469915)
chr7 (181-233)||(7471820-7471872)
chr7 (181-233)||(20297759-20297811)
chr7 (181-233)||(38394383-38394435)
chr7 (182-233)||(44961-45012)
chr7 (182-233)||(1606776-1606827)
chr7 (182-233)||(20626430-20626481)
chr7 (182-233)||(20630321-20630372)
chr7 (182-233)||(20642740-20642791)
chr7 (182-233)||(25542925-25542976)
chr7 (181-233)||(40836582-40836635)
chr7 (181-233)||(28485962-28486014)
chr7 (181-233)||(40550226-40550278)
chr7 (179-233)||(1046754-1046809)
chr7 (194-233)||(20299857-20299896)
chr7 (182-233)||(22137476-22137527)
chr7 (182-233)||(40552503-40552554)
chr7 (182-233)||(48458050-48458100)
chr7 (181-233)||(1049128-1049181)
chr7 (180-233)||(3878976-3879029)
chr7 (181-233)||(4295780-4295833)
chr7 (181-233)||(13099316-13099369)
chr7 (184-233)||(38397036-38397084)
chr7 (193-233)||(36026-36066)
chr7 (182-233)||(1850378-1850429)
chr7 (181-231)||(7349116-7349167)
chr7 (181-231)||(7351490-7351541)
chr7 (182-233)||(43253358-43253408)
chr7 (199-233)||(1502832-1502866)
chr7 (181-233)||(7094300-7094352)
chr7 (182-233)||(31434892-31434945)
chr7 (198-230)||(25276518-25276550)
chr7 (182-233)||(2935666-2935716)
chr7 (181-231)||(42223550-42223601)
chr7 (180-233)||(27832486-27832540)
chr7 (188-233)||(3036121-3036166)
chr7 (181-233)||(7092053-7092105)
chr7 (181-233)||(21678454-21678507)
chr7 (181-233)||(26804903-26804956)
chr7 (182-230)||(27306076-27306125)
chr7 (181-233)||(44724970-44725023)
chr7 (201-233)||(40946727-40946759)
chr7 (182-233)||(42330846-42330898)
[»] chr6 (38 HSPs)
chr6 (14-121)||(12198101-12198207)
chr6 (10-96)||(20832706-20832791)
chr6 (180-233)||(11982870-11982923)
chr6 (181-233)||(8717194-8717246)
chr6 (181-233)||(26068234-26068286)
chr6 (182-233)||(12195354-12195405)
chr6 (182-233)||(18322515-18322566)
chr6 (182-233)||(26065961-26066012)
chr6 (182-233)||(29754549-29754600)
chr6 (181-233)||(2628726-2628777)
chr6 (182-233)||(9020346-9020398)
chr6 (182-233)||(13057607-13057659)
chr6 (181-233)||(26932402-26932454)
chr6 (182-233)||(4816071-4816122)
chr6 (178-233)||(30034443-30034497)
chr6 (181-231)||(14458606-14458656)
chr6 (181-230)||(1230089-1230137)
chr6 (181-233)||(15367446-15367499)
chr6 (180-233)||(28241161-28241213)
chr6 (182-233)||(5273055-5273107)
chr6 (182-233)||(13040180-13040232)
chr6 (197-233)||(26065404-26065440)
chr6 (197-233)||(26085373-26085409)
chr6 (181-233)||(33309279-33309330)
chr6 (182-233)||(30967623-30967673)
chr6 (182-233)||(33311548-33311598)
chr6 (179-233)||(14507015-14507068)
chr6 (50-96)||(20598707-20598753)
chr6 (181-233)||(15540989-15541042)
chr6 (200-233)||(19704422-19704455)
chr6 (181-233)||(24338294-24338347)
chr6 (181-233)||(30728668-30728721)
chr6 (182-229)||(20915197-20915244)
chr6 (193-230)||(15346764-15346802)
chr6 (181-233)||(3631783-3631836)
chr6 (181-233)||(17012450-17012503)
chr6 (188-232)||(22491028-22491073)
chr6 (182-233)||(3629711-3629763)
[»] chr4 (55 HSPs)
chr4 (180-233)||(22780210-22780263)
chr4 (181-233)||(44599679-44599731)
chr4 (181-233)||(47868843-47868895)
chr4 (180-233)||(3937124-3937177)
chr4 (181-233)||(22782576-22782628)
chr4 (179-233)||(18847593-18847647)
chr4 (181-233)||(14789272-14789325)
chr4 (180-233)||(24348642-24348694)
chr4 (181-233)||(36921337-36921390)
chr4 (181-233)||(8631259-8631310)
chr4 (193-233)||(11435396-11435436)
chr4 (181-233)||(11437804-11437856)
chr4 (182-233)||(14787274-14787326)
chr4 (181-233)||(16931630-16931682)
chr4 (181-233)||(16933987-16934039)
chr4 (182-233)||(24889234-24889286)
chr4 (182-233)||(37089212-37089264)
chr4 (182-233)||(38928024-38928076)
chr4 (182-233)||(5635318-5635368)
chr4 (182-233)||(14633759-14633810)
chr4 (182-233)||(31849440-31849490)
chr4 (179-233)||(9173984-9174037)
chr4 (178-227)||(49088998-49089048)
chr4 (181-233)||(16453744-16453797)
chr4 (181-233)||(22046525-22046578)
chr4 (181-233)||(22802576-22802629)
chr4 (185-233)||(36919432-36919481)
chr4 (181-233)||(53405574-53405627)
chr4 (182-233)||(2891728-2891780)
chr4 (182-230)||(9148679-9148727)
chr4 (181-233)||(9176314-9176365)
chr4 (182-233)||(16455662-16455714)
chr4 (181-233)||(22132228-22132280)
chr4 (181-233)||(22134456-22134508)
chr4 (182-233)||(22800705-22800757)
chr4 (182-233)||(33415334-33415386)
chr4 (181-233)||(47210636-47210688)
chr4 (182-233)||(2484715-2484765)
chr4 (182-233)||(7941764-7941814)
chr4 (182-233)||(17662092-17662142)
chr4 (182-233)||(26085818-26085868)
chr4 (182-231)||(6765285-6765335)
chr4 (188-233)||(27499484-27499530)
chr4 (181-233)||(40091258-40091312)
chr4 (181-233)||(11006093-11006145)
chr4 (181-233)||(11008407-11008459)
chr4 (197-233)||(22044247-22044283)
chr4 (182-233)||(37312924-37312976)
chr4 (182-233)||(40637514-40637566)
chr4 (197-233)||(51015686-51015722)
chr4 (182-233)||(56030893-56030945)
chr4 (182-233)||(5198845-5198895)
chr4 (198-233)||(18709020-18709055)
chr4 (199-233)||(38409645-38409679)
chr4 (197-233)||(3824464-3824501)
[»] chr8 (30 HSPs)
chr8 (181-233)||(18811151-18811203)
chr8 (181-233)||(28283061-28283113)
chr8 (181-233)||(43530558-43530610)
chr8 (182-233)||(3883436-3883487)
chr8 (182-233)||(24873039-24873090)
chr8 (180-233)||(3874436-3874489)
chr8 (182-233)||(15073150-15073202)
chr8 (181-233)||(43080045-43080097)
chr8 (182-233)||(15809661-15809711)
chr8 (182-233)||(18813325-18813376)
chr8 (181-233)||(22684490-22684544)
chr8 (182-233)||(43082416-43082467)
chr8 (179-229)||(32339757-32339806)
chr8 (181-233)||(14477688-14477741)
chr8 (182-233)||(28251410-28251462)
chr8 (181-230)||(15068423-15068473)
chr8 (181-233)||(15956391-15956444)
chr8 (181-233)||(27827428-27827480)
chr8 (181-233)||(41383102-41383155)
chr8 (182-231)||(44721288-44721337)
chr8 (181-233)||(4424462-4424513)
chr8 (182-233)||(21482746-21482798)
chr8 (182-233)||(27829739-27829790)
chr8 (182-231)||(33541255-33541305)
chr8 (193-233)||(13858345-13858386)
chr8 (182-233)||(14808199-14808252)
chr8 (182-233)||(183258-183310)
chr8 (182-233)||(27106747-27106799)
chr8 (174-233)||(27911515-27911575)
chr8 (174-233)||(27957934-27957994)
[»] chr5 (43 HSPs)
chr5 (182-233)||(38959972-38960023)
chr5 (181-233)||(39798417-39798469)
chr5 (182-233)||(3372977-3373028)
chr5 (181-233)||(36402169-36402222)
chr5 (181-233)||(15354413-15354465)
chr5 (181-233)||(15356689-15356741)
chr5 (181-233)||(23665433-23665485)
chr5 (181-233)||(23793102-23793154)
chr5 (181-233)||(34476893-34476944)
chr5 (182-233)||(21684294-21684344)
chr5 (182-233)||(23741697-23741748)
chr5 (182-233)||(31179213-31179264)
chr5 (182-233)||(38882475-38882525)
chr5 (181-233)||(25804411-25804464)
chr5 (181-233)||(4410408-4410459)
chr5 (181-233)||(31543121-31543173)
chr5 (181-233)||(34479258-34479309)
chr5 (199-233)||(10750087-10750121)
chr5 (199-233)||(10757563-10757597)
chr5 (181-233)||(6745455-6745508)
chr5 (181-233)||(18467071-18467124)
chr5 (181-233)||(18511055-18511108)
chr5 (181-233)||(18597027-18597080)
chr5 (181-233)||(27910820-27910873)
chr5 (181-229)||(41585579-41585628)
chr5 (182-233)||(10528937-10528989)
chr5 (182-233)||(18469396-18469448)
chr5 (201-233)||(25921333-25921365)
chr5 (182-233)||(34530559-34530611)
chr5 (182-233)||(39854869-39854921)
chr5 (194-233)||(40221911-40221951)
chr5 (198-233)||(2175288-2175323)
chr5 (188-231)||(31545472-31545515)
chr5 (199-233)||(4237015-4237049)
chr5 (196-233)||(16776542-16776580)
chr5 (188-233)||(21289141-21289187)
chr5 (181-230)||(31465832-31465882)
chr5 (183-233)||(6756874-6756926)
chr5 (181-233)||(24127239-24127292)
chr5 (182-233)||(658204-658255)
chr5 (182-233)||(10587201-10587252)
chr5 (186-233)||(21948416-21948464)
chr5 (188-231)||(27912925-27912969)
[»] chr1 (47 HSPs)
chr1 (182-233)||(23816272-23816323)
chr1 (182-233)||(47906653-47906704)
chr1 (181-233)||(16226556-16226608)
chr1 (181-233)||(46431547-46431599)
chr1 (179-233)||(6995537-6995592)
chr1 (182-233)||(9459277-9459328)
chr1 (182-233)||(9463104-9463155)
chr1 (182-233)||(16231951-16232002)
chr1 (182-233)||(23786227-23786278)
chr1 (181-233)||(18839970-18840023)
chr1 (182-231)||(24326052-24326101)
chr1 (180-233)||(31490294-31490347)
chr1 (180-233)||(51750426-51750478)
chr1 (182-233)||(10399669-10399721)
chr1 (179-231)||(13358963-13359014)
chr1 (181-233)||(20291844-20291895)
chr1 (182-233)||(39462904-39462956)
chr1 (181-233)||(47177750-47177802)
chr1 (181-233)||(51757922-51757974)
chr1 (182-233)||(13447117-13447167)
chr1 (182-233)||(31735365-31735416)
chr1 (182-233)||(47180101-47180152)
chr1 (182-231)||(13762225-13762275)
chr1 (181-233)||(16429335-16429388)
chr1 (181-233)||(31424861-31424914)
chr1 (182-233)||(2949079-2949131)
chr1 (182-233)||(31422706-31422758)
chr1 (182-233)||(39932462-39932514)
chr1 (182-233)||(15294678-15294728)
chr1 (182-233)||(20302829-20302879)
chr1 (188-233)||(25251127-25251173)
chr1 (181-231)||(28842883-28842932)
chr1 (181-233)||(50078634-50078688)
chr1 (181-230)||(8348904-8348953)
chr1 (181-233)||(2617905-2617956)
chr1 (182-233)||(40134326-40134378)
chr1 (187-233)||(11457327-11457374)
chr1 (182-233)||(15916770-15916821)
chr1 (182-231)||(25248398-25248448)
chr1 (182-233)||(4131221-4131274)
chr1 (181-233)||(14097814-14097867)
chr1 (193-233)||(16432769-16432810)
chr1 (181-233)||(28206911-28206964)
chr1 (181-233)||(50307388-50307441)
chr1 (197-233)||(2232873-2232909)
chr1 (182-233)||(3579431-3579482)
chr1 (197-233)||(9526744-9526779)
[»] chr2 (22 HSPs)
chr2 (177-230)||(45332015-45332068)
chr2 (181-233)||(36560980-36561032)
chr2 (184-233)||(45279844-45279893)
chr2 (181-233)||(19501842-19501893)
chr2 (181-233)||(35217809-35217861)
chr2 (182-233)||(43623423-43623475)
chr2 (182-233)||(35215433-35215484)
chr2 (182-233)||(36558721-36558772)
chr2 (185-233)||(27105160-27105209)
chr2 (181-233)||(19504177-19504228)
chr2 (181-233)||(42453840-42453891)
chr2 (179-230)||(45238839-45238891)
chr2 (199-233)||(23452094-23452128)
chr2 (182-231)||(24162063-24162113)
chr2 (181-233)||(11739420-11739473)
chr2 (181-233)||(21520533-21520586)
chr2 (182-233)||(22874467-22874519)
chr2 (180-233)||(22287179-22287233)
chr2 (180-233)||(28196993-28197047)
chr2 (198-231)||(13909902-13909935)
chr2 (182-233)||(17849475-17849528)
chr2 (182-233)||(19007998-19008051)
[»] scaffold0472 (1 HSPs)
scaffold0472 (181-233)||(6595-6647)
[»] scaffold0140 (2 HSPs)
scaffold0140 (180-233)||(24788-24841)
scaffold0140 (181-233)||(22513-22565)
[»] scaffold0005 (3 HSPs)
scaffold0005 (181-233)||(50405-50458)
scaffold0005 (182-233)||(52404-52456)
scaffold0005 (182-233)||(183482-183533)
[»] scaffold1899 (1 HSPs)
scaffold1899 (193-233)||(11-51)
[»] scaffold0127 (1 HSPs)
scaffold0127 (181-233)||(12714-12766)
[»] scaffold1674 (1 HSPs)
scaffold1674 (188-231)||(1298-1341)
[»] scaffold0131 (2 HSPs)
scaffold0131 (178-233)||(14227-14281)
scaffold0131 (188-227)||(15393-15433)
[»] scaffold0068 (1 HSPs)
scaffold0068 (182-233)||(29566-29616)
[»] scaffold0154 (1 HSPs)
scaffold0154 (183-231)||(11315-11364)
[»] scaffold0038 (1 HSPs)
scaffold0038 (180-233)||(41323-41375)
[»] scaffold0031 (1 HSPs)
scaffold0031 (182-233)||(79579-79631)
[»] scaffold0370 (1 HSPs)
scaffold0370 (198-233)||(1309-1344)
[»] scaffold0267 (1 HSPs)
scaffold0267 (182-233)||(422-473)
[»] scaffold0250 (1 HSPs)
scaffold0250 (199-233)||(3275-3309)
[»] scaffold0045 (1 HSPs)
scaffold0045 (184-233)||(85621-85671)
[»] scaffold0011 (1 HSPs)
scaffold0011 (184-233)||(35987-36037)
[»] scaffold0004 (1 HSPs)
scaffold0004 (181-233)||(80253-80306)
[»] scaffold0891 (1 HSPs)
scaffold0891 (181-231)||(4517-4567)
[»] scaffold0256 (1 HSPs)
scaffold0256 (181-233)||(16606-16657)
[»] scaffold0025 (1 HSPs)
scaffold0025 (182-233)||(69133-69184)


Alignment Details
Target: chr3 (Bit Score: 55; Significance: 9e-23; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 43619168 - 43619266
Alignment:
Q  40 tatatacaacatgttccagcaatagcttgcataacaagtaaatgctaactgtctaaccaaccagctaaaaacatggaaaagttagttacataggaaaca 138  Q
    |||||||||||| |||| ||||||| |||||||| || |||| |||||||||||||||||  ||||||||||| |||||||||| |||| |||||||||    
T  43619168 tatatacaacatcttccggcaatagtttgcataataaataaaggctaactgtctaaccaattagctaaaaacaaggaaaagttaattacttaggaaaca 43619266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 6065632 - 6065684
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6065632 ttgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 6065684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 25533843 - 25533791
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25533843 ttgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 25533791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 9604447 - 9604498
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9604447 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 9604498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 10621365 - 10621417
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  10621365 ttgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 10621417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 43226496 - 43226444
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  43226496 ttgttgcgaattcgatgagaaatcacaccaataacaacttgatgtgtggagca 43226444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 747177 - 747126
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  747177 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 747126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 10084229 - 10084279
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10084229 tgttgcgaatccgatgaaaa-tcacaccaataacaacttgatgtgtggagca 10084279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 38210789 - 38210738
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  38210789 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 38210738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 50494417 - 50494366
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  50494417 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 50494366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 6063282 - 6063331
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtgga 230  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  6063282 ttgttgcgaattcgatgaaaaatcacaccgataacaacttgatgtgtgga 6063331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 28412864 - 28412921
Alignment:
Q  176 tgattttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||| |||||| |||| |||||||||| ||||||||||||||||||||||||||||||    
T  28412864 tgatattgttgtgaattcgatgaaaaaacacaccaataacaacttgatgtgtggagca 28412921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 4308122 - 4308174
Alignment:
Q  182 tgttgcgaatccgatgaaaa-atcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  4308122 tgttgcgaattcgatgaaaatatcacaccaataacaacttgatgtgtggagca 4308174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 11168520 - 11168469
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  11168520 ttgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 11168469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 10191152 - 10191202
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  10191152 tgttgcgaatctgatgaaaa-tcacaccaataacaacttgatgtgtggagca 10191202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 41849470 - 41849420
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  41849470 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 41849420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 5192066 - 5192018
Alignment:
Q  184 ttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  5192066 ttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 5192018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 18099009 - 18099062
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  18099009 ttgttgggaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 18099062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 31151756 - 31151703
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||| |||| ||||||||||||||||||||||  |||||||||||||||||    
T  31151756 tttgttgtgaattcgatgaaaaatcacaccaataaatacttgatgtgtggagca 31151703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 43421259 - 43421312
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  43421259 ttgttgcgaattcgatgaaaaatcacaccaataacaaagttgatgtgtggagca 43421312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 456326 - 456275
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  456326 ttgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 456275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 458703 - 458652
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  458703 ttgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 458652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 5886601 - 5886565
Alignment:
Q  197 gaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||||||||||    
T  5886601 gaaaaatcacaccaataacaacttgatgtgtggagca 5886565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 5900074 - 5900038
Alignment:
Q  197 gaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||||||||||    
T  5900074 gaaaaatcacaccaataacaacttgatgtgtggagca 5900038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 7606442 - 7606493
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  7606442 ttgttgcaaattcgatgaaaaat-acaccaataacaacttgatgtgtggagca 7606493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 10958162 - 10958213
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  10958162 ttgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 10958213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 18096740 - 18096792
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  18096740 tgttgcgaattcgatgaaaaattacaccaataacaaacttgatgtgtggagca 18096792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 36012243 - 36012191
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| |||||||    
T  36012243 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtatggagca 36012191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 43228694 - 43228654
Alignment:
Q  193 cgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  43228694 cgatgagaaatcacaccaataacaacttgatgtgtggagca 43228654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 45883357 - 45883305
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  45883357 tgttgcaaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 45883305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 51726846 - 51726893
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtgg 229  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  51726846 ttgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtgg 51726893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 53915338 - 53915390
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| |||||||    
T  53915338 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtatggagca 53915390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 5522466 - 5522516
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| || |||||| |||||||||||||||||||||||||||||||    
T  5522466 tgttgcgaattcgttgaaaa-tcacaccaataacaacttgatgtgtggagca 5522516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 10955867 - 10955917
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  10955867 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 10955917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 22114143 - 22114193
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  22114143 tgttgcgaattcgatgaaaa-tcacaccaatagcaacttgatgtgtggagca 22114193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 25389328 - 25389274
Alignment:
Q  180 tttgttgcgaatccgatgaaaaa-tcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||| |||| |||||||||| ||| |||||||||||||||||||||||||||    
T  25389328 tttgttgtgaattcgatgaaaaaatcataccaataacaacttgatgtgtggagca 25389274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 27101028 - 27101074
Alignment:
Q  188 gaatccgatgaaaa-atcacaccaataacaacttgatgtgtggagca 233  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  27101028 gaattcgatgaaaatatcacaccaataacaacttgatgtgtggagca 27101074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 53893910 - 53893944
Alignment:
Q  199 aaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||||||||    
T  53893910 aaaatcacaccaataacaacttgatgtgtggagca 53893944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 1313822 - 1313769
Alignment:
Q  182 tgttgcgaatccgatgaaaaa-tcacaccaataacaa-cttgatgtgtggagca 233  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  1313822 tgttgcgaattcgatgaaaaactcacaccaataacaaacttgatgtgtggagca 1313769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 1321898 - 1321846
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  1321898 ttgttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagca 1321846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 38890441 - 38890408
Alignment:
Q  200 aaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||||||||||||||||||||||||||    
T  38890441 aaatcacaccaataacaacttgatgtgtggagca 38890408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 42990718 - 42990666
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  42990718 ttgttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagca 42990666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 43423307 - 43423360
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||||| ||||||||||| || |||||||||||||||    
T  43423307 ttgttgcgaattcgatgaaaaattacaccaataacaaagttgatgtgtggagca 43423360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 53917505 - 53917558
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||  |||||||||||||||| |||||| ||||||||||||||||||    
T  53917505 ttgttgcgaaatcgatgaaaaatcacactaataacaaacttgatgtgtggagca 53917558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 11170791 - 11170740
Alignment:
Q  179 ttttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggag 231  Q
    ||||||||||||| ||||||||| |||||  ||||||||||||||||||||||    
T  11170791 ttttgttgcgaattcgatgaaaa-tcacattaataacaacttgatgtgtggag 11170740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 28761287 - 28761339
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaa-cttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||| || ||||||||||||||||    
T  28761287 tgttgtgaattcgatgaaaaatcacaccaataataatcttgatgtgtggagca 28761339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 47701522 - 47701565
Alignment:
Q  184 ttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtg 226  Q
    |||||||| ||||||||||||||||||||||| |||||||||||    
T  47701522 ttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtg 47701565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 3859931 - 3859881
Alignment:
Q  181 ttgttgcgaatccgat-gaaaaatcacaccaataacaacttgatgtgtgga 230  Q
    |||||| |||| |||| ||||| ||||||||||||||||||||||||||||    
T  3859931 ttgttgtgaattcgatcgaaaagtcacaccaataacaacttgatgtgtgga 3859881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 43228733 - 43228695
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaactt 220  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  43228733 tgttgcgaattcgatgagaaatcacaccaataacaactt 43228695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 3315101 - 3315048
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataa-caacttgatgtgtggagca 233  Q
    ||||||||||| |||||| ||| |||||||||||  ||||||||||||||||||    
T  3315101 ttgttgcgaattcgatgagaaaacacaccaataataaacttgatgtgtggagca 3315048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 27635497 - 27635550
Alignment:
Q  182 tgttgcgaatccgatga-aaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| ||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  27635497 tgttgcaaattcgatgagaaaatcacaccaataacaaacttgatgtgtggagca 27635550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 28101847 - 28101900
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataa-caacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||| ||||||||||  ||||||||||||||||||    
T  28101847 ttgttgtgaattcgatgaaaaattacaccaataataaacttgatgtgtggagca 28101900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 35917876 - 35917925
Alignment:
Q  182 tgttgcgaatccgatgaaaaa-tcacaccaataacaacttgatgtgtgga 230  Q
    |||||||||| |||||||||| | ||||||||||||||||||||| ||||    
T  35917876 tgttgcgaattcgatgaaaaaattacaccaataacaacttgatgtatgga 35917925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 4103736 - 4103787
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||| ||||||||    
T  4103736 tgttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgcgtggagca 4103787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 17795669 - 17795617
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataa-caacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||||||||||||||||  || |||||||||||||||    
T  17795669 tgttgtgaattcgatgaaaaatcacaccaataataaatttgatgtgtggagca 17795617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 19104109 - 19104057
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataa-caacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||||||||||||||||  || |||||||||||||||    
T  19104109 tgttgtgaattcgatgaaaaatcacaccaataataaatttgatgtgtggagca 19104057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 23633863 - 23633811
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||||||||  ||| |||||||| ||||    
T  23633863 ttgttgtgaattcgatgaaaaatcacaccaataaatactagatgtgtgaagca 23633811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 24980126 - 24980074
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  24980126 tgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagca 24980074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 233
Target Start/End: Complemental strand, 28181401 - 28181365
Alignment:
Q  198 aaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||||||||||| ||||||||||||||||||    
T  28181401 aaaaatcacaccaataacaaacttgatgtgtggagca 28181365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 11759580 - 11759524
Alignment:
Q  177 gattttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11759580 gattttgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 11759524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 31153688 - 31153740
Alignment:
Q  179 ttttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggag 231  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31153688 ttttgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggag 31153740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 9027034 - 9027085
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9027034 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 9027085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 28488000 - 28487950
Alignment:
Q  183 gttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28488000 gttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 28487950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 31540183 - 31540078
Alignment:
Q  14 gctttattgaatgacgaaccaaggtatatatacaacat-gttccagcaatagcttgcataacaagtaaatgctaactgtctaaccaaccagctaaaaaca 112  Q
    |||||||||| ||| |||||||| ||||||||||  || ||| |||| ||| ||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  31540183 gctttattgattgaggaaccaag-tatatatacacaattgtttcagctataacttgcatcacaagtaactgctaactgtctaaccaactagctaaaaaca 31540085  T
Q  113 tggaaaa 119  Q
     ||||||    
T  31540084 aggaaaa 31540078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 7469862 - 7469915
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  7469862 tttgttgcgaattcgatgaaaaatcacaccaataacaatttgatgtgtggagca 7469915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 7471820 - 7471872
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  7471820 ttgttgcgaattcaatgaaaaatcacaccaataacaacttgatgtgtggagca 7471872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 20297811 - 20297759
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  20297811 ttgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 20297759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 38394435 - 38394383
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  38394435 ttgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 38394383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 45012 - 44961
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  45012 tgttgcgaattcgatgagaaatcacaccaataacaacttgatgtgtggagca 44961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 1606827 - 1606776
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  1606827 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 1606776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 20626481 - 20626430
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  20626481 tgttgcgaattcgatgaaaaatcacaccaataacaacctgatgtgtggagca 20626430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 20630372 - 20630321
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  20630372 tgttgcgaattcgatgaaaaatcacaccaataacaacctgatgtgtggagca 20630321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 20642791 - 20642740
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  20642791 tgttgcgaattcgatgaaaaatcacaccaataacaacctgatgtgtggagca 20642740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 25542976 - 25542925
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  25542976 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 25542925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 40836582 - 40836635
Alignment:
Q  181 ttgttgcgaatccgat-gaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  40836582 ttgttgcgaattcgatcgaaaaatcacaccaataacaacttgatgtgtggagca 40836635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 28486014 - 28485962
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||||||||||||||||| |||||||||    
T  28486014 ttgttgtgaattcgatgaaaaatcacaccaataacaacttgatatgtggagca 28485962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 40550278 - 40550226
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  40550278 ttgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtggagca 40550226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 1046754 - 1046809
Alignment:
Q  179 ttttgttgcgaatccgatgaaaa-atcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  1046754 ttttgttgcgaattcgaagaaaaaatcacaccaataacaacttgatgtgtggagca 1046809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 20299896 - 20299857
Alignment:
Q  194 gatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20299896 gatgaaaaatcacaccaataacaacttgatgtgtggagca 20299857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 22137527 - 22137476
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  22137527 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtggagca 22137476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 40552554 - 40552503
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  40552554 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtggagca 40552503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 48458100 - 48458050
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  48458100 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 48458050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 1049128 - 1049181
Alignment:
Q  181 ttgttgcgaatccgatgaaaaat-cacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  1049128 ttgttgcgaattcgaagaaaaattcacaccaataacaacttgatgtgtggagca 1049181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 3879029 - 3878976
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||| |||||| |||||||| |||||| ||||||||||||||||||    
T  3879029 tttgttgcgaattcgatgagaaatcacatcaataataacttgatgtgtggagca 3878976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 4295780 - 4295833
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  4295780 ttgttgcaaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 4295833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 13099316 - 13099369
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  13099316 ttgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 13099369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 38397084 - 38397036
Alignment:
Q  184 ttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  38397084 ttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 38397036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 36066 - 36026
Alignment:
Q  193 cgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  36066 cgatgagaaatcacaccaataacaacttgatgtgtggagca 36026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 1850429 - 1850378
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||   ||||||||||||||||||||||||||||||||||    
T  1850429 tgttgcgaattcgatttgaaatcacaccaataacaacttgatgtgtggagca 1850378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 7349116 - 7349167
Alignment:
Q  181 ttgttgcgaatccgatgaaaa-atcacaccaataacaacttgatgtgtggag 231  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||||||    
T  7349116 ttgttgtgaattcgatgaaaaaatcacaccaataacaacttgatgtgtggag 7349167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 7351490 - 7351541
Alignment:
Q  181 ttgttgcgaatccgatgaaaa-atcacaccaataacaacttgatgtgtggag 231  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||||||    
T  7351490 ttgttgtgaattcgatgaaaaaatcacaccaataacaacttgatgtgtggag 7351541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 43253358 - 43253408
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  43253358 tgttgcgaattcgatgaaaa-tcacaccaataacaatttgatgtgtggagca 43253408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 1502832 - 1502866
Alignment:
Q  199 aaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||||||||    
T  1502832 aaaatcacaccaataacaacttgatgtgtggagca 1502866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 7094300 - 7094352
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  7094300 ttgttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagca 7094352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 31434892 - 31434945
Alignment:
Q  182 tgttgcgaatccgatga-aaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  31434892 tgttgcgaattcgatgagaaaatcacaccaataacaaacttgatgtgtggagca 31434945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 230
Target Start/End: Complemental strand, 25276550 - 25276518
Alignment:
Q  198 aaaaatcacaccaataacaacttgatgtgtgga 230  Q
    |||||||||||||||||||||||||||||||||    
T  25276550 aaaaatcacaccaataacaacttgatgtgtgga 25276518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 2935716 - 2935666
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||| ||||    
T  2935716 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtgaagca 2935666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 42223601 - 42223550
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggag 231  Q
    ||||||||||| |||| ||||| |||||||||||| ||||||||||||||||    
T  42223601 ttgttgcgaattcgataaaaaaacacaccaataacaaacttgatgtgtggag 42223550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 27832486 - 27832540
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||| |||| ||||||||||||| ||||||||| ||||| ||||||||||||    
T  27832486 tttgttgtgaattcgatgaaaaatcataccaataacaaacttaatgtgtggagca 27832540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 3036166 - 3036121
Alignment:
Q  188 gaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||| |||||| |||||||||||||||||| ||||||| |||||||    
T  3036166 gaattcgatgagaaatcacaccaataacaatttgatgtttggagca 3036121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 7092053 - 7092105
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||| ||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  7092053 ttgttgcaaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagca 7092105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 21678507 - 21678454
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||| ||||| |||||||| |||||||||    
T  21678507 ttgttgtgaattcgatgaaaaatcacaccgataacaaacttgatttgtggagca 21678454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 26804956 - 26804903
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||||  ||||| |||||||||||||||| || |||||||||||||||    
T  26804956 ttgttgcgaatttgatgagaaatcacaccaataacaaatttgatgtgtggagca 26804903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 27306076 - 27306125
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtgga 230  Q
    |||||||||| |||||| | |||||||||||||| |||||||||||||||    
T  27306076 tgttgcgaattcgatgagagatcacaccaataacaaacttgatgtgtgga 27306125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 44725023 - 44724970
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| |||||  ||| |||||||||||| ||||||||||||||||||    
T  44725023 ttgttgcgaattcgatgggaaaacacaccaataacaaacttgatgtgtggagca 44724970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 40946759 - 40946727
Alignment:
Q  201 aatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||| |||||||||||||||||||||||||    
T  40946759 aatcacatcaataacaacttgatgtgtggagca 40946727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 42330846 - 42330898
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaa-cttgatgtgtggagca 233  Q
    |||||||||| |||||| ||||||| ||||||| || ||||||||||||||||    
T  42330846 tgttgcgaattcgatgagaaatcacgccaataataaacttgatgtgtggagca 42330898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 12198101 - 12198207
Alignment:
Q  14 gctttattgaatgacgaaccaaggtatatatacaacatgttccagcaatagcttgcataacaagtaaatgctaactgtctaaccaaccagctaaaaacat 113  Q
    |||||||| ||||| |||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||| |||   |||||||||     
T  12198101 gctttattaaatgaggaaccaag-tatatatacaacatgttctagctatagcttgcattacaagtaaatgctaattgtctaactaactttctaaaaacaa 12198199  T
Q  114 ggaaaagt 121  Q
    || |||||    
T  12198200 ggtaaagt 12198207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 20832791 - 20832706
Alignment:
Q  10 attagctttattgaatgacgaaccaaggtatatatacaacatgttccagcaatagcttgcataacaagtaaatgctaactgtctaac 96  Q
    ||||||||||||||| || |||||||| |||||||||||||||||||| | || |||||||||| |||||| |||||||||||||||    
T  20832791 attagctttattgaacgaggaaccaag-tatatatacaacatgttccaactatcgcttgcataagaagtaagtgctaactgtctaac 20832706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 11982870 - 11982923
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  11982870 tttgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 11982923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 8717194 - 8717246
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  8717194 ttgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 8717246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 26068234 - 26068286
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  26068234 ttgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 26068286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 12195354 - 12195405
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  12195354 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 12195405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 18322566 - 18322515
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  18322566 tgttgcgaattctatgaaaaatcacaccaataacaacttgatgtgtggagca 18322515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 26065961 - 26066012
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  26065961 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 26066012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 29754549 - 29754600
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  29754549 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 29754600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 2628726 - 2628777
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  2628726 ttgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 2628777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 9020398 - 9020346
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  9020398 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 9020346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 13057659 - 13057607
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  13057659 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 13057607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 26932402 - 26932454
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  26932402 ttgttgtgaatttgatgaaaaatcacaccaataacaacttgatgtgtggagca 26932454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 4816071 - 4816122
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  4816071 tgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtggagca 4816122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 30034443 - 30034497
Alignment:
Q  178 attttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||    
T  30034443 attttgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtatggagca 30034497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 14458606 - 14458656
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggag 231  Q
    ||||||||||| |||||||||||||||||||||| | ||||||||||||||    
T  14458606 ttgttgcgaattcgatgaaaaatcacaccaataatagcttgatgtgtggag 14458656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 1230089 - 1230137
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtgga 230  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  1230089 ttgttgcgaattcgat-aaaaatcacaccaataacaacttgatgtgtgga 1230137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 15367499 - 15367446
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  15367499 ttgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 15367446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 28241161 - 28241213
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  28241161 tttgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 28241213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 5273055 - 5273107
Alignment:
Q  182 tgttgcgaatccgatgaaaa-atcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  5273055 tgttgtgaattcgatgaaaaaatcacaccaataacaacttgatgtgtggagca 5273107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 13040232 - 13040180
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||||||||||    
T  13040232 tgttgcgaattcgatgaaaaatcacactaataacaaacttgatgtgtggagca 13040180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 26065440 - 26065404
Alignment:
Q  197 gaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||||||||||    
T  26065440 gaaaaatcacaccaataacaacttgatgtgtggagca 26065404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 26085409 - 26085373
Alignment:
Q  197 gaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||||||||||    
T  26085409 gaaaaatcacaccaataacaacttgatgtgtggagca 26085373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 33309330 - 33309279
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  33309330 ttgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 33309279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 30967673 - 30967623
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| || |||||| |||||||||||||||||||||||||||||||    
T  30967673 tgttgcgaattcgttgaaaa-tcacaccaataacaacttgatgtgtggagca 30967623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 33311598 - 33311548
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  33311598 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 33311548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 14507015 - 14507068
Alignment:
Q  179 ttttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||| ||| ||||||| | |||||||||||||||||||||||||||||||    
T  14507015 ttttgttgcaaattcgatgaata-tcacaccaataacaacttgatgtgtggagca 14507068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 20598707 - 20598753
Alignment:
Q  50 atgttccagcaatagcttgcataacaagtaaatgctaactgtctaac 96  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||    
T  20598707 atgttccagctatagcttgcataataagtaagtgctaactgtctaac 20598753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 15540989 - 15541042
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||| | ||||||||||||| ||||||||| ||||||||||||||||||    
T  15540989 ttgttgcgacttcgatgaaaaatcaaaccaataacaaacttgatgtgtggagca 15541042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 19704422 - 19704455
Alignment:
Q  200 aaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||||||||||||||||||||||||||    
T  19704422 aaatcacaccaataacaacttgatgtgtggagca 19704455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 24338294 - 24338347
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  24338294 ttgttgtgaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagca 24338347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 30728668 - 30728721
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||| |||||| || |||||||||||||||||||| ||||||||||||||||||    
T  30728668 ttgtagcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtggagca 30728721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 20915197 - 20915244
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtgg 229  Q
    ||||| ||||| ||| ||||||||||||||||| ||||||||||||||    
T  20915197 tgttgtgaatctgatcaaaaatcacaccaataataacttgatgtgtgg 20915244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 15346802 - 15346764
Alignment:
Q  193 cgatgaaaaatcacaccaataac-aacttgatgtgtgga 230  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  15346802 cgatgaaaaatcacaccaataacaaacttgatgtgtgga 15346764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 3631783 - 3631836
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| |||||||||| |||||||||||| ||||||| ||||||||||    
T  3631783 ttgttgtgaattcgatgaaaaaacacaccaataacaaacttgacgtgtggagca 3631836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 17012503 - 17012450
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataaca-acttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||| |||||| | |||||||||||||||||    
T  17012503 ttgttgtgaattcgatgaaaaatcacaacaataaaatacttgatgtgtggagca 17012450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 22491073 - 22491028
Alignment:
Q  188 gaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagc 232  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||||    
T  22491073 gaattcgatgaaaaatcacaccaataacaaacttaatgtgtggagc 22491028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 3629711 - 3629763
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  3629711 tgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagca 3629763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 9e-20; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 22780210 - 22780263
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22780210 tttgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 22780263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 44599679 - 44599731
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44599679 ttgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 44599731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 47868895 - 47868843
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47868895 ttgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 47868843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 3937124 - 3937177
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  3937124 tttgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgaggagca 3937177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 22782576 - 22782628
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  22782576 ttgttgcgaattcgacgaaaaatcacaccaataacaacttgatgtgtggagca 22782628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 18847647 - 18847593
Alignment:
Q  179 ttttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  18847647 ttttgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtggagca 18847593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 14789272 - 14789325
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  14789272 ttgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 14789325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 24348694 - 24348642
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  24348694 tttgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 24348642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 36921337 - 36921390
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  36921337 ttgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 36921390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 8631259 - 8631310
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  8631259 ttgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 8631310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 11435436 - 11435396
Alignment:
Q  193 cgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11435436 cgatgaaaaatcacaccaataacaacttgatgtgtggagca 11435396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 11437856 - 11437804
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| |||||||    
T  11437856 ttgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtatggagca 11437804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 14787274 - 14787326
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  14787274 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 14787326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 16931630 - 16931682
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| |||||||||||||||||||||||||||| ||||||||||||    
T  16931630 ttgttgtgaattcgatgaaaaatcacaccaataacaacttaatgtgtggagca 16931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 16933987 - 16934039
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| |||||||||||||||||||||||||||| ||||||||||||    
T  16933987 ttgttgtgaattcgatgaaaaatcacaccaataacaacttaatgtgtggagca 16934039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 24889286 - 24889234
Alignment:
Q  182 tgttgcgaatccgatgaaaa-atcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  24889286 tgttgcgaattcgatgaaaatatcacaccaataacaacttgatgtgtggagca 24889234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 37089212 - 37089264
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  37089212 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 37089264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 38928024 - 38928076
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  38928024 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 38928076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 5635318 - 5635368
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  5635318 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 5635368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 14633810 - 14633759
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||||||||||    
T  14633810 tgttccgaattcgatgagaaatcacaccaataacaacttgatgtgtggagca 14633759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 31849440 - 31849490
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  31849440 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 31849490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 9173984 - 9174037
Alignment:
Q  179 ttttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  9173984 ttttgttgcgaattcgatgaaaa-tcacactaataacaacttgatgtgtggagca 9174037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 49089048 - 49088998
Alignment:
Q  178 attttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgt 227  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  49089048 attttgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgt 49088998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 16453797 - 16453744
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  16453797 ttgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 16453744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 22046525 - 22046578
Alignment:
Q  181 ttgttgcgaatccgat-gaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| |||| |||||||||||||||||||||||||||||||||||||    
T  22046525 ttgttgtgaattcgatcgaaaaatcacaccaataacaacttgatgtgtggagca 22046578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 22802576 - 22802629
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  22802576 ttgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 22802629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 36919432 - 36919481
Alignment:
Q  185 tgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  36919432 tgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 36919481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 53405627 - 53405574
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataa-caacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||    
T  53405627 ttgttgcgaattcgatgaaaaatcacaccaataataaacttgatgtgtggagca 53405574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 2891780 - 2891728
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  2891780 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 2891728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 9148727 - 9148679
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtgga 230  Q
    |||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  9148727 tgttgcgaattcgatgagaaaacacaccaataacaacttgatgtgtgga 9148679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 9176314 - 9176365
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  9176314 ttgttgcgaattcgacgaaaa-tcacaccaataacaacttgatgtgtggagca 9176365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 16455714 - 16455662
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  16455714 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 16455662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 22132228 - 22132280
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| ||||| ||| || |||||||||||||||||||||||||||||||||    
T  22132228 ttgttgtgaatctgatcaataatcacaccaataacaacttgatgtgtggagca 22132280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 22134456 - 22134508
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| ||||| ||| || |||||||||||||||||||||||||||||||||    
T  22134456 ttgttgtgaatctgatcaataatcacaccaataacaacttgatgtgtggagca 22134508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 22800705 - 22800757
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  22800705 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtggggagca 22800757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 33415334 - 33415386
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  33415334 tgttgcgaatccgatgagaaatcacacaaataacaaacttgatgtgtggagca 33415386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 47210636 - 47210688
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| || ||  ||||||||||||||||||||||||||||||||||    
T  47210636 ttgttgcgaattcgttgtgaaatcacaccaataacaacttgatgtgtggagca 47210688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 2484715 - 2484765
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  2484715 tgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 2484765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 7941814 - 7941764
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  7941814 tgttgcgaattcgatgaaaa-tcacaccaacaacaacttgatgtgtggagca 7941764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 17662092 - 17662142
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| || |||||| |||||||||||||||||||||||||||||||    
T  17662092 tgttgcgaattcgttgaaaa-tcacaccaataacaacttgatgtgtggagca 17662142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 26085818 - 26085868
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| |||||| || |||||||||||||||||||||||||||||||    
T  26085818 tgttgcgaattcgatgagaa-tcacaccaataacaacttgatgtgtggagca 26085868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 6765335 - 6765285
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggag 231  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||||||||||    
T  6765335 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggag 6765285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 27499530 - 27499484
Alignment:
Q  188 gaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27499530 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 27499484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 40091258 - 40091312
Alignment:
Q  181 ttgttgcgaatccgatgaaaaa-tcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  40091258 ttgttgcgaattcgatgaaaaattcacaccaataacaaacttgatgtgtggagca 40091312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 11006093 - 11006145
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||  |||| ||||||||||||||||||||||||||||||    
T  11006093 ttgttgtgaattcgatcgaaaaacacaccaataacaacttgatgtgtggagca 11006145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 11008407 - 11008459
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||  |||| ||||||||||||||||||||||||||||||    
T  11008407 ttgttgtgaattcgatcgaaaaacacaccaataacaacttgatgtgtggagca 11008459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 22044247 - 22044283
Alignment:
Q  197 gaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||| |||||||||||||||||||||||||||||    
T  22044247 gaaaaataacaccaataacaacttgatgtgtggagca 22044283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 37312924 - 37312976
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataa-caacttgatgtgtggagca 233  Q
    ||||||||||  |||||||||||||||||||||  ||||||||||||||||||    
T  37312924 tgttgcgaatttgatgaaaaatcacaccaataataaacttgatgtgtggagca 37312976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 40637566 - 40637514
Alignment:
Q  182 tgttgcgaatccgatgaaaa-atcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| || ||| || ||||||||||||||||||||||||||||||||    
T  40637566 tgttgcgaattcgttgagaatatcacaccaataacaacttgatgtgtggagca 40637514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 51015722 - 51015686
Alignment:
Q  197 gaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| ||||||||||||||||||||||||||||||    
T  51015722 gaaaaaacacaccaataacaacttgatgtgtggagca 51015686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 56030945 - 56030893
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataa-caacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||  |||||||| |||||||||    
T  56030945 tgttgcgaattcgatgaaaaatcacaccaataataaacttgatatgtggagca 56030893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 5198895 - 5198845
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||| |||||||||||| ||||||||||||||||||    
T  5198895 tgttgtgaattcgatgaaaa-tcacaccaataataacttgatgtgtggagca 5198845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 233
Target Start/End: Original strand, 18709020 - 18709055
Alignment:
Q  198 aaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| ||||||||||||||||||||||||||||||    
T  18709020 aaaaaccacaccaataacaacttgatgtgtggagca 18709055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 38409679 - 38409645
Alignment:
Q  199 aaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||| ||||||||||||||||||||||||||||||    
T  38409679 aaaaacacaccaataacaacttgatgtgtggagca 38409645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 3824464 - 3824501
Alignment:
Q  197 gaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  3824464 gaaaaatcacaccaataacaaacttgatgtgtggagca 3824501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 18811203 - 18811151
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18811203 ttgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 18811151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 28283061 - 28283113
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28283061 ttgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 28283113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 43530610 - 43530558
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  43530610 ttgttgcgaattcaatgaaaaatcacaccaataacaacttgatgtgtggagca 43530558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 3883436 - 3883487
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  3883436 tgttgcgaattcgatgaaaaatcacatcaataacaacttgatgtgtggagca 3883487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 24873039 - 24873090
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  24873039 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 24873090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 3874489 - 3874436
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||| |||| || ||||||||||||||||||||||||||||||||||||||    
T  3874489 tttgttgtgaattcgttgaaaaatcacaccaataacaacttgatgtgtggagca 3874436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 15073202 - 15073150
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  15073202 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 15073150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 43080097 - 43080045
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  43080097 ttgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtggagca 43080045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 15809711 - 15809661
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  15809711 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 15809661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 18813376 - 18813325
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| |||||    
T  18813376 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatatgtagagca 18813325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 22684490 - 22684544
Alignment:
Q  181 ttgttgcgaatccgatg--aaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  22684490 ttgttgcgaattcgatggaaaaaatcacaccaataacaacttgatgtgtggagca 22684544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 43082467 - 43082416
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  43082467 tgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtggagca 43082416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 32339806 - 32339757
Alignment:
Q  179 ttttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtgg 229  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  32339806 ttttgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtgg 32339757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 14477741 - 14477688
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  14477741 ttgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 14477688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 28251410 - 28251462
Alignment:
Q  182 tgttgcgaatccgatgaaaa-atcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  28251410 tgttgtgaattcgatgaaaaaatcacaccaataacaacttgatgtgtggagca 28251462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 15068473 - 15068423
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtgga 230  Q
    ||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  15068473 ttgttgcgaattcgatgaaaaatcacaccaacaacaaacttgatgtgtgga 15068423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 15956444 - 15956391
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  15956444 ttgttgtgaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagca 15956391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 27827480 - 27827428
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  27827480 ttgttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagca 27827428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 41383155 - 41383102
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||| | |||||||||| |||||||||||| ||||||||||||||||||    
T  41383155 ttgttgcgagttcgatgaaaaaccacaccaataacaaacttgatgtgtggagca 41383102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 44721337 - 44721288
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggag 231  Q
    ||||| ||||| ||| || |||||||||||||||||||||||||||||||    
T  44721337 tgttgtgaatctgatcaataatcacaccaataacaacttgatgtgtggag 44721288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 4424513 - 4424462
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||| ||||||||||||||||||| |||||||||||    
T  4424513 ttgttgtgaattcgatgaaaa-tcacaccaataacaacttggtgtgtggagca 4424462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 21482798 - 21482746
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataa-caacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||||||||||||||||  ||||||||||||||||||    
T  21482798 tgttgtgaattcgatgaaaaatcacaccaataataaacttgatgtgtggagca 21482746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 27829790 - 27829739
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  27829790 tgttgcgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagca 27829739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 33541255 - 33541305
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggag 231  Q
    ||||| |||| |||| |||||||||||||||||| ||||||||||||||||    
T  33541255 tgttgtgaattcgatcaaaaatcacaccaataacaaacttgatgtgtggag 33541305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 13858345 - 13858386
Alignment:
Q  193 cgatgaaaaatcacaccaataa-caacttgatgtgtggagca 233  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  13858345 cgatgaaaaatcacaccaataagaaacttgatgtgtggagca 13858386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 14808252 - 14808199
Alignment:
Q  182 tgttgcgaatccgatgaaaaa-tcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||| || |||||||||| ||||||||||||| ||||||||||||||||||    
T  14808252 tgttgcgcattcgatgaaaaaatcacaccaataacaaacttgatgtgtggagca 14808199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 183310 - 183258
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  183310 tgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagca 183258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 27106747 - 27106799
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| ||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  27106747 tgttgcaaattcgatgagaaaacacaccaataacaaacttgatgtgtggagca 27106799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 27911575 - 27911515
Alignment:
Q  174 agtgattttgttgcgaatccgatgaaaaatcacaccaat-aacaacttgatgtgtggagca 233  Q
    |||||| |||||| ||||  | ||||||||||||||||| || ||||||||||||||||||    
T  27911575 agtgatcttgttgtgaatttgttgaaaaatcacaccaataaaaaacttgatgtgtggagca 27911515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 27957994 - 27957934
Alignment:
Q  174 agtgattttgttgcgaatccgatgaaaaatcacaccaat-aacaacttgatgtgtggagca 233  Q
    |||||| |||||| ||||  | ||||||||||||||||| || ||||||||||||||||||    
T  27957994 agtgatcttgttgtgaatttgttgaaaaatcacaccaataaaaaacttgatgtgtggagca 27957934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 38959972 - 38960023
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38959972 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 38960023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 39798469 - 39798417
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  39798469 ttgttgcgaattcgatgaaaaatcacaccaataacaatttgatgtgtggagca 39798417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 3372977 - 3373028
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  3372977 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 3373028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 36402169 - 36402222
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  36402169 ttgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 36402222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 15354413 - 15354465
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  15354413 ttgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtggagca 15354465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 15356689 - 15356741
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  15356689 ttgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtggagca 15356741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 23665485 - 23665433
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  23665485 ttgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtggagca 23665433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 23793102 - 23793154
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  23793102 ttgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtggagca 23793154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 34476893 - 34476944
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  34476893 ttgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 34476944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 21684294 - 21684344
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  21684294 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 21684344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 23741697 - 23741748
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  23741697 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtggagca 23741748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 31179213 - 31179264
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| |||||||    
T  31179213 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtatggagca 31179264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 38882525 - 38882475
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  38882525 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 38882475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 25804464 - 25804411
Alignment:
Q  181 ttgttgcgaatccgatgaaaa-atcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||||||    
T  25804464 ttgttgcgtattcgatgaaaatatcacaccaataacaacttgatgtgtggagca 25804411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 4410459 - 4410408
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| || |||||| |||||||||||||||||||||||||||||||    
T  4410459 ttgttgcgaattcgttgaaaa-tcacaccaataacaacttgatgtgtggagca 4410408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 31543173 - 31543121
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| ||||| ||| || |||||||||||||||||||||||||||||||||    
T  31543173 ttgttgtgaatctgatcaataatcacaccaataacaacttgatgtgtggagca 31543121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 34479258 - 34479309
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  34479258 ttgttgcgaatttgatgaaaa-tcacaccaataacaacttgatgtgtggagca 34479309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 10750121 - 10750087
Alignment:
Q  199 aaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||||||||    
T  10750121 aaaatcacaccaataacaacttgatgtgtggagca 10750087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 10757597 - 10757563
Alignment:
Q  199 aaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||||||||    
T  10757597 aaaatcacaccaataacaacttgatgtgtggagca 10757563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 6745508 - 6745455
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  6745508 ttgttgcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagca 6745455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 18467124 - 18467071
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| |||||||||||||||| |||||| ||||||||||||||||||    
T  18467124 ttgttgtgaattcgatgaaaaatcacactaataacaaacttgatgtgtggagca 18467071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 18511055 - 18511108
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| |||||| |||||||| ||||||| ||||||||||||||||||    
T  18511055 ttgttgcgaattcgatgataaatcacatcaataacaaacttgatgtgtggagca 18511108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 18597080 - 18597027
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||| ||| ||||||||||||||||||||||| |||||||||| |||||||    
T  18597080 ttgttgcaaattcgatgaaaaatcacaccaataacaaacttgatgtatggagca 18597027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 27910873 - 27910820
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||||||||| || |||||||||||||||    
T  27910873 ttgttgtgaattcgatgaaaaatcacaccaataacaaatttgatgtgtggagca 27910820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 41585579 - 41585628
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtgg 229  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  41585579 ttgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgg 41585628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 10528937 - 10528989
Alignment:
Q  182 tgttgcgaatccgatga-aaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||||| ||||    
T  10528937 tgttgtgaattcgatgagaaaatcacaccaataacaacttgatgtgtgaagca 10528989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 18469448 - 18469396
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  18469448 tgttgtgaattcgatgaaaaatcataccaataacaaacttgatgtgtggagca 18469396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 25921333 - 25921365
Alignment:
Q  201 aatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||||||    
T  25921333 aatcacaccaataacaacttgatgtgtggagca 25921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 34530559 - 34530611
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||||||||||||||||| |||||||||||| |||||    
T  34530559 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtcgagca 34530611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 39854921 - 39854869
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataa-caacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||  |||||||| |||||||||    
T  39854921 tgttgcgaattcgatgaaaaatcacaccaataataaacttgatatgtggagca 39854869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 40221951 - 40221911
Alignment:
Q  194 gatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  40221951 gatgaaaaatcacaccaataacaaacttgatgtgtggagca 40221911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 233
Target Start/End: Complemental strand, 2175323 - 2175288
Alignment:
Q  198 aaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||| |||||||||||||||||||||||||||||||    
T  2175323 aaaagtcacaccaataacaacttgatgtgtggagca 2175288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 31545515 - 31545472
Alignment:
Q  188 gaatccgatgaaaaatcacaccaataacaacttgatgtgtggag 231  Q
    ||||| ||| || |||||||||||||||||||||||||||||||    
T  31545515 gaatctgattaataatcacaccaataacaacttgatgtgtggag 31545472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 4237049 - 4237015
Alignment:
Q  199 aaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||| ||||    
T  4237049 aaaatcacaccaataacaacttgatgtgtgaagca 4237015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 16776580 - 16776542
Alignment:
Q  196 tgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  16776580 tgaaaaatcacaccaataacaaacttgatgtgtggagca 16776542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 21289187 - 21289141
Alignment:
Q  188 gaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||    
T  21289187 gaattcgatgaaaaatcacaccaatatcaaacttgatgtgtggagca 21289141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 31465832 - 31465882
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtgga 230  Q
    |||||||||||  |||||||||||||||||||||| || ||||||||||||    
T  31465832 ttgttgcgaatttgatgaaaaatcacaccaataacaaatttgatgtgtgga 31465882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 6756926 - 6756874
Alignment:
Q  183 gttgcgaatccgatgaaaaatcacaccaataac--aacttgatgtgtggagca 233  Q
    ||||||||| |||||| ||| ||||||||||||  ||||||||||||||||||    
T  6756926 gttgcgaattcgatgagaaaacacaccaataacaaaacttgatgtgtggagca 6756874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 24127292 - 24127239
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| |||||||||||||||| |||||| ||||| ||||||||||||    
T  24127292 ttgttgtgaattcgatgaaaaatcacacaaataacaaacttaatgtgtggagca 24127239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 658204 - 658255
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| ||||||||||||| || |||||||||||||||    
T  658204 tgttgcgaattcgatgaaaa-tcacaccaataacaaatttgatgtgtggagca 658255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 10587252 - 10587201
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  10587252 tgttgtgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagca 10587201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 21948464 - 21948416
Alignment:
Q  186 gcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  21948464 gcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagca 21948416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 27912969 - 27912925
Alignment:
Q  188 gaatccgatgaaaaatcacaccaataac-aacttgatgtgtggag 231  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||    
T  27912969 gaattcgatgaaaaatcccaccaataacaaacttgatgtgtggag 27912925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 23816323 - 23816272
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23816323 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 23816272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 47906704 - 47906653
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47906704 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 47906653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 16226608 - 16226556
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  16226608 ttgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 16226556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 46431547 - 46431599
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  46431547 ttgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtttggagca 46431599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 6995537 - 6995592
Alignment:
Q  179 ttttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  6995537 ttttgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 6995592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 9459277 - 9459328
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  9459277 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 9459328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 9463104 - 9463155
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  9463104 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 9463155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 16232002 - 16231951
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  16232002 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 16231951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 23786278 - 23786227
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  23786278 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 23786227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 18840023 - 18839970
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  18840023 ttgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 18839970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 24326101 - 24326052
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggag 231  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  24326101 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggag 24326052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 31490347 - 31490294
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||||||||    
T  31490347 tttgttgcgaattcgatgaaaaatcacaccaatacaaacttgatgtgtggagca 31490294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 51750478 - 51750426
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  51750478 tttgttgcgaattcgat-aaaaatcacaccaataacaacttgatgtgtggagca 51750426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 10399669 - 10399721
Alignment:
Q  182 tgttgcgaatccgatgaaaa-atcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  10399669 tgttgcgaattcgatgaaaatatcacaccaataacaacttgatgtgtggagca 10399721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 13359014 - 13358963
Alignment:
Q  179 ttttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggag 231  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  13359014 ttttgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggag 13358963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 20291895 - 20291844
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  20291895 ttgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 20291844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 39462956 - 39462904
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  39462956 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 39462904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 47177802 - 47177750
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| |||| ||||||||||||||||||||||||||||||||||||    
T  47177802 ttgttgtgaattcgatcaaaaatcacaccaataacaacttgatgtgtggagca 47177750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 51757974 - 51757922
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||||||||||    
T  51757974 ttgttgtgaattcgatgaaaaatgacaccaataacaacttgatgtgtggagca 51757922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 13447117 - 13447167
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  13447117 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 13447167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 31735365 - 31735416
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  31735365 tgttgcgaattcgatgagaaattacaccaataacaacttgatgtgtggagca 31735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 47180152 - 47180101
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||    
T  47180152 tgttgtgaattcgatcaaaaatcacaccaataacaacttgatgtgtggagca 47180101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 13762275 - 13762225
Alignment:
Q  182 tgttgcgaatccgatga-aaaatcacaccaataacaacttgatgtgtggag 231  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  13762275 tgttgcgaattcgatgagaaaatcacaccaataacaacttgatgtgtggag 13762225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 16429388 - 16429335
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  16429388 ttgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 16429335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 31424861 - 31424914
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  31424861 ttgttgcgaattcaatgaaaaatcacaccaataacaaacttgatgtgtggagca 31424914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 2949079 - 2949131
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  2949079 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 2949131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 31422706 - 31422758
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  31422706 tgttgcgaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagca 31422758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 39932514 - 39932462
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  39932514 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 39932462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 15294678 - 15294728
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  15294678 tgttgcgatttcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 15294728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 20302879 - 20302829
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| |||||||    
T  20302879 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtctggagca 20302829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 25251127 - 25251173
Alignment:
Q  188 gaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  25251127 gaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 25251173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 28842932 - 28842883
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggag 231  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  28842932 ttgttgcgaattcgatgaaaa-tcacactaataacaacttgatgtgtggag 28842883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 50078634 - 50078688
Alignment:
Q  181 ttgttgcgaatccgatga-aaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  50078634 ttgttgcgaattcgatgagaaaatcacaccaataacaaacttgatgtgtggagca 50078688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 8348904 - 8348953
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtgga 230  Q
    |||||| |||| |||||||||||||||||||||| ||||||| |||||||    
T  8348904 ttgttgtgaattcgatgaaaaatcacaccaataaaaacttgacgtgtgga 8348953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 2617956 - 2617905
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||| ||||    
T  2617956 ttgttgcgaattcgatgaaaac-cacaccaataacaacttgatgtgtgaagca 2617905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 40134378 - 40134326
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  40134378 tgttgtgaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagca 40134326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 11457327 - 11457374
Alignment:
Q  187 cgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  11457327 cgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgaagca 11457374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 15916821 - 15916770
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||| ||||||||||||  |||||||||||||||||    
T  15916821 tgttgtgaattcgatgaaaagtcacaccaataaatacttgatgtgtggagca 15916770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 25248398 - 25248448
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggag 231  Q
    ||||| |||| ||||||||||||||| ||||||| ||||||||||||||||    
T  25248398 tgttgtgaattcgatgaaaaatcacaacaataacaaacttgatgtgtggag 25248448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 4131221 - 4131274
Alignment:
Q  182 tgttgcgaatccgatgaaaaa-tcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||    
T  4131221 tgttgcgaattcgatgaaaaactcacaccaataacaaacttgatgtgcggagca 4131274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 14097814 - 14097867
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| ||| |||||| |||||||||||| ||||||||||||| ||||    
T  14097814 ttgttgcgaattcgaagaaaaaacacaccaataacaaacttgatgtgtgaagca 14097867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 16432810 - 16432769
Alignment:
Q  193 cgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  16432810 cgatgaaaaatcacaccaataacaaatttgatgtgtggagca 16432769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 28206911 - 28206964
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  28206911 ttgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagca 28206964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 50307388 - 50307441
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataa-caacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||||||||  |||||||||| |||||||    
T  50307388 ttgttgggaattcgatgaaaaatcacaccaataataaacttgatgtctggagca 50307441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 2232909 - 2232873
Alignment:
Q  197 gaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  2232909 gaaaaaccacaccaataaaaacttgatgtgtggagca 2232873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 3579431 - 3579482
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaa-cttgatgtgtggagca 233  Q
    ||||| |||| |||||||||| |||||||||||||| ||||||||||||||||    
T  3579431 tgttgtgaattcgatgaaaaa-cacaccaataacaaacttgatgtgtggagca 3579482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 9526779 - 9526744
Alignment:
Q  197 gaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||| ||||||||||||||||||    
T  9526779 gaaaaatcacaccaataa-aacttgatgtgtggagca 9526744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 45332015 - 45332068
Alignment:
Q  177 gattttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtgga 230  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  45332015 gattttgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 45332068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 36560980 - 36561032
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  36560980 ttgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 36561032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 45279844 - 45279893
Alignment:
Q  184 ttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  45279844 ttgcgaattcgatgagaaatcacaccaataacaacttgatgtgtggagca 45279893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 19501842 - 19501893
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  19501842 ttgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 19501893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 35217809 - 35217861
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  35217809 ttgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtggagca 35217861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 43623423 - 43623475
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  43623423 tgttgcgaattcgatgaaaaatcacaccaataactaacttgatgtgtggagca 43623475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 35215433 - 35215484
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  35215433 tgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtggagca 35215484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 36558721 - 36558772
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||||||||||||||| ||||||||||||||||||    
T  36558721 tgttgtgaattcgatgaaaaatcacaccaataataacttgatgtgtggagca 36558772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 27105209 - 27105160
Alignment:
Q  185 tgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27105209 tgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 27105160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 19504177 - 19504228
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  19504177 ttgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 19504228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 42453891 - 42453840
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  42453891 ttgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 42453840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 45238839 - 45238891
Alignment:
Q  179 ttttgttgcgaatccgatgaaaaatcacaccaataa-caacttgatgtgtgga 230  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  45238839 ttttgttgcgaattcgatgaaaaatcacaccaataataaacttgatgtgtgga 45238891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 23452094 - 23452128
Alignment:
Q  199 aaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||||||||    
T  23452094 aaaatcacaccaataacaacttgatgtgtggagca 23452128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 24162063 - 24162113
Alignment:
Q  182 tgttgcgaatccgatgaaaa-atcacaccaataacaacttgatgtgtggag 231  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||||||    
T  24162063 tgttgtgaatacgatgaaaatatcacaccaataacaacttgatgtgtggag 24162113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 11739420 - 11739473
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||||| |||||    
T  11739420 ttgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtagagca 11739473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 21520533 - 21520586
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  21520533 ttgttgcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagca 21520586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 22874519 - 22874467
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataa-caacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||||||||||||||||  ||||||||||||||||||    
T  22874519 tgttgtgaattcgatgaaaaatcacaccaataataaacttgatgtgtggagca 22874467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 22287179 - 22287233
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||| |||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  22287179 tttgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagca 22287233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 28197047 - 28196993
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||| || | ||||||||||||||||||||||| || |||||||||||||||    
T  28197047 tttgttgtgagttcgatgaaaaatcacaccaataacaaatttgatgtgtggagca 28196993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 13909902 - 13909935
Alignment:
Q  198 aaaaatcacaccaataacaacttgatgtgtggag 231  Q
    |||| |||||||||||||||||||||||||||||    
T  13909902 aaaagtcacaccaataacaacttgatgtgtggag 13909935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 17849528 - 17849475
Alignment:
Q  182 tgttgcgaatccgatgaaaaa-tcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  17849528 tgttgtgaattcgatgaaaaaatcacaccaataacaaacttgatgtgtggagca 17849475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 19008051 - 19007998
Alignment:
Q  182 tgttgcgaatccgatgaaaaa-tcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  19008051 tgttgtgaattcgatgaaaaaatcacaccaataacaaacttgatgtgtggagca 19007998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 6647 - 6595
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  6647 ttgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggagca 6595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 24841 - 24788
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  24841 tttgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtggagca 24788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 22565 - 22513
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  22565 ttgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtggagca 22513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 50458 - 50405
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  50458 ttgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 50405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 52456 - 52404
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  52456 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagca 52404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 183482 - 183533
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||||||||||    
T  183482 tgttccgaattcgatgagaaatcacaccaataacaacttgatgtgtggagca 183533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 51 - 11
Alignment:
Q  193 cgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  51 cgatgaaaaatcacaccaataacaacttgatgtgtggagca 11  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 12714 - 12766
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||||||||||    
T  12714 ttgttgtgaattcgatgaaaaatgacaccaataacaacttgatgtgtggagca 12766  T

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Target: scaffold1674 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 1298 - 1341
Alignment:
Q  188 gaatccgatgaaaaatcacaccaataacaacttgatgtgtggag 231  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  1298 gaattcgatgaaaaatcacaccaataacaacttgatgtgtggag 1341  T

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Target: scaffold0131 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 14227 - 14281
Alignment:
Q  178 attttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  14227 attttgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 14281  T

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Target: scaffold0131; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 15433 - 15393
Alignment:
Q  188 gaatccgatgaaaaatcacaccaataac-aacttgatgtgt 227  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  15433 gaattcgatgaaaaatcacaccaataacaaacttgatgtgt 15393  T

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Target: scaffold0068 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 29616 - 29566
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  29616 tgttgcgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 29566  T

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Target: scaffold0154 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 11315 - 11364
Alignment:
Q  183 gttgcgaatccgatgaaaa-atcacaccaataacaacttgatgtgtggag 231  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  11315 gttgcgaattcgatgaaaatatcacaccaataacaacttgatgtgtggag 11364  T

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Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 41323 - 41375
Alignment:
Q  180 tttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  41323 tttgttgtgaattcgatgaaaa-tcacaccaataacaacttgatgtgtggagca 41375  T

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Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 79631 - 79579
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  79631 tgttgcgaattcaatgaaaaatcacaccaataacaaacttgatgtgtggagca 79579  T

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Target: scaffold0370 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 233
Target Start/End: Original strand, 1309 - 1344
Alignment:
Q  198 aaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||||||||||||||||||||||||||||||||||    
T  1309 aaaaatcacaccaataacaacttgatgtgtggagca 1344  T

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Target: scaffold0267 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 473 - 422
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    ||||| |||| || ||| ||||||||||||||||||||||||||||||||||    
T  473 tgttgtgaattcgttgagaaatcacaccaataacaacttgatgtgtggagca 422  T

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Target: scaffold0250 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 3309 - 3275
Alignment:
Q  199 aaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||||||||||||||||||||||||||||||||    
T  3309 aaaatcacaccaataacaacttgatgtgtggagca 3275  T

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Target: scaffold0045 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 85671 - 85621
Alignment:
Q  184 ttgcgaatccgatgaaaaatcacaccaataacaa-cttgatgtgtggagca 233  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||||||||    
T  85671 ttgcgaattcgatgaaaaatcacaccaataacaatcttaatgtgtggagca 85621  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 36037 - 35987
Alignment:
Q  184 ttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  36037 ttgcgaattcgatgaaaaattacaccaataacaaacttgatgtgtggagca 35987  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 80306 - 80253
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  80306 ttgttgcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagca 80253  T

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Target: scaffold0891 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 4517 - 4567
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggag 231  Q
    |||||| ||||| |||  ||||||||||||||||||| |||||||||||||    
T  4517 ttgttgtgaatctgatccaaaatcacaccaataacaatttgatgtgtggag 4567  T

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Target: scaffold0256 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 16657 - 16606
Alignment:
Q  181 ttgttgcgaatccgatgaaaaatcacaccaataacaacttgatgtgtggagca 233  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||| ||||||||    
T  16657 ttgttgtgaattcgatgaaaa-tcacaccaataaaaacttgatgcgtggagca 16606  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 69133 - 69184
Alignment:
Q  182 tgttgcgaatccgatgaaaaatcacaccaataac-aacttgatgtgtggagca 233  Q
    ||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  69133 tgttgtgaattcgatgaaaa-tcacaccaataacaaacttgatgtgtggagca 69184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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