View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3721_low_2 (Length: 351)

Name: NF3721_low_2
Description: NF3721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3721_low_2
NF3721_low_2
[»] chr6 (60 HSPs)
chr6 (2-341)||(16966491-16966834)
chr6 (5-227)||(22375787-22376009)
chr6 (228-330)||(16914008-16914110)
chr6 (2-214)||(20183575-20183788)
chr6 (2-214)||(22152203-22152416)
chr6 (18-227)||(25739164-25739373)
chr6 (2-227)||(17229049-17229271)
chr6 (18-227)||(20137418-20137626)
chr6 (18-227)||(22195243-22195451)
chr6 (18-141)||(26923659-26923784)
chr6 (18-209)||(28103448-28103639)
chr6 (18-141)||(18333806-18333931)
chr6 (18-141)||(22783051-22783176)
chr6 (18-141)||(24423370-24423495)
chr6 (18-109)||(27852167-27852258)
chr6 (18-141)||(33865101-33865226)
chr6 (18-141)||(2290392-2290517)
chr6 (18-141)||(12743143-12743268)
chr6 (18-141)||(17882710-17882834)
chr6 (18-109)||(20733244-20733335)
chr6 (18-141)||(1540125-1540250)
chr6 (18-141)||(8055854-8055978)
chr6 (18-141)||(19858136-19858261)
chr6 (18-141)||(33862620-33862745)
chr6 (113-227)||(18198677-18198791)
chr6 (18-122)||(18343033-18343139)
chr6 (63-127)||(27572168-27572232)
chr6 (2-130)||(34963909-34964038)
chr6 (120-227)||(22792529-22792636)
chr6 (18-227)||(16246069-16246270)
chr6 (19-141)||(2077128-2077251)
chr6 (18-101)||(19401063-19401146)
chr6 (2-130)||(23992958-23993087)
chr6 (18-130)||(25721034-25721147)
chr6 (18-227)||(18453971-18454179)
chr6 (2-48)||(18259158-18259204)
chr6 (6-202)||(18697299-18697494)
chr6 (19-154)||(19772667-19772803)
chr6 (18-127)||(25753380-25753490)
chr6 (18-127)||(25755550-25755660)
chr6 (18-130)||(16198334-16198447)
chr6 (18-130)||(17027864-17027977)
chr6 (18-130)||(25535944-25536057)
chr6 (18-130)||(25689362-25689475)
chr6 (18-130)||(31629861-31629974)
chr6 (5-69)||(31734708-31734772)
chr6 (104-227)||(9621628-9621751)
chr6 (18-227)||(19363210-19363415)
chr6 (6-202)||(18707050-18707245)
chr6 (113-227)||(23527396-23527509)
chr6 (123-209)||(35011931-35012017)
chr6 (19-83)||(1599017-1599082)
chr6 (18-83)||(8226740-8226805)
chr6 (18-83)||(23531896-23531961)
chr6 (166-209)||(19669183-19669226)
chr6 (18-83)||(19005924-19005990)
chr6 (18-51)||(18914933-18914966)
chr6 (118-207)||(23539701-23539790)
chr6 (113-209)||(9097747-9097842)
chr6 (18-130)||(30676039-30676152)
[»] scaffold0001 (5 HSPs)
scaffold0001 (2-228)||(498900-499126)
scaffold0001 (18-227)||(447257-447465)
scaffold0001 (113-227)||(498167-498280)
scaffold0001 (18-83)||(152111-152176)
scaffold0001 (18-130)||(501793-501906)
[»] chr7 (77 HSPs)
chr7 (7-227)||(15203021-15203241)
chr7 (18-219)||(9724802-9725003)
chr7 (6-191)||(14980658-14980843)
chr7 (6-191)||(15410134-15410319)
chr7 (18-227)||(13893289-13893498)
chr7 (6-109)||(11085481-11085584)
chr7 (18-141)||(457146-457271)
chr7 (18-141)||(15375927-15376052)
chr7 (18-141)||(20384337-20384462)
chr7 (18-141)||(16233345-16233471)
chr7 (18-141)||(11392516-11392639)
chr7 (18-141)||(13870169-13870294)
chr7 (18-141)||(16410883-16411008)
chr7 (18-141)||(27217685-27217809)
chr7 (18-141)||(32126314-32126439)
chr7 (18-141)||(41523743-41523868)
chr7 (18-127)||(8135238-8135347)
chr7 (5-192)||(11054589-11054778)
chr7 (118-227)||(11768188-11768297)
chr7 (6-106)||(11091610-11091710)
chr7 (7-227)||(16996936-16997155)
chr7 (21-141)||(41526205-41526327)
chr7 (18-141)||(18628389-18628514)
chr7 (18-141)||(26355194-26355318)
chr7 (18-141)||(26357646-26357770)
chr7 (113-227)||(130037-130150)
chr7 (18-190)||(15095637-15095810)
chr7 (19-141)||(16460036-16460160)
chr7 (18-141)||(18431536-18431661)
chr7 (18-141)||(18641095-18641220)
chr7 (19-141)||(16580544-16580668)
chr7 (18-227)||(42462715-42462923)
chr7 (18-130)||(5294432-5294545)
chr7 (18-130)||(8941203-8941316)
chr7 (18-121)||(36685146-36685249)
chr7 (19-130)||(11973084-11973196)
chr7 (18-141)||(14948333-14948458)
chr7 (18-127)||(15140155-15140265)
chr7 (18-101)||(15623988-15624070)
chr7 (18-109)||(46579759-46579850)
chr7 (18-227)||(9176835-9177043)
chr7 (113-227)||(11524893-11525007)
chr7 (19-141)||(14259323-14259445)
chr7 (18-130)||(5295605-5295718)
chr7 (18-130)||(5296778-5296891)
chr7 (18-130)||(8469271-8469384)
chr7 (18-130)||(9945010-9945123)
chr7 (27-141)||(20484903-20485018)
chr7 (18-130)||(23461633-23461746)
chr7 (18-130)||(45846765-45846878)
chr7 (18-92)||(24703098-24703172)
chr7 (18-92)||(24705545-24705619)
chr7 (18-101)||(30820151-30820233)
chr7 (18-83)||(14269084-14269150)
chr7 (113-227)||(17016689-17016802)
chr7 (166-227)||(12902112-12902173)
chr7 (98-227)||(13848987-13849115)
chr7 (18-83)||(19485973-19486038)
chr7 (123-227)||(1867336-1867440)
chr7 (123-227)||(14036962-14037066)
chr7 (123-227)||(14346992-14347096)
chr7 (113-209)||(15007744-15007839)
chr7 (19-123)||(21188926-21189031)
chr7 (19-154)||(32302141-32302278)
chr7 (156-227)||(4071661-4071732)
chr7 (18-92)||(14317516-14317590)
chr7 (118-227)||(9032614-9032723)
chr7 (5-82)||(16214461-16214539)
chr7 (6-83)||(18455578-18455656)
chr7 (113-175)||(38519577-38519638)
chr7 (25-130)||(15081169-15081275)
chr7 (6-59)||(15119295-15119348)
chr7 (98-227)||(16574088-16574216)
chr7 (98-227)||(16591446-16591574)
chr7 (7-82)||(10658840-10658916)
chr7 (19-55)||(20488351-20488387)
chr7 (6-54)||(37793380-37793428)
[»] chr4 (52 HSPs)
chr4 (2-227)||(19739581-19739806)
chr4 (2-227)||(27996634-27996859)
chr4 (18-219)||(13591069-13591270)
chr4 (18-199)||(26014153-26014336)
chr4 (4-227)||(16043801-16044023)
chr4 (67-220)||(50160935-50161089)
chr4 (102-227)||(14651467-14651591)
chr4 (102-225)||(40907801-40907925)
chr4 (18-109)||(10057622-10057713)
chr4 (6-227)||(12841408-12841628)
chr4 (18-141)||(15117566-15117691)
chr4 (22-141)||(3485792-3485913)
chr4 (18-141)||(12032985-12033110)
chr4 (18-227)||(15792538-15792746)
chr4 (18-141)||(18238826-18238951)
chr4 (18-141)||(19243526-19243651)
chr4 (18-141)||(44616114-44616239)
chr4 (18-141)||(25031088-25031214)
chr4 (18-141)||(1836734-1836857)
chr4 (18-141)||(7640400-7640525)
chr4 (18-141)||(14873299-14873424)
chr4 (18-141)||(29268179-29268304)
chr4 (18-141)||(50221552-50221677)
chr4 (113-227)||(26049715-26049828)
chr4 (18-141)||(44772297-44772422)
chr4 (18-130)||(363102-363215)
chr4 (19-141)||(18022937-18023060)
chr4 (113-227)||(14852119-14852232)
chr4 (18-130)||(14970027-14970140)
chr4 (18-130)||(15489469-15489582)
chr4 (18-130)||(18214524-18214637)
chr4 (18-130)||(52872402-52872515)
chr4 (18-92)||(14717934-14718008)
chr4 (132-227)||(17334044-17334139)
chr4 (18-92)||(19617395-19617469)
chr4 (6-227)||(32306140-32306360)
chr4 (166-209)||(46643597-46643640)
chr4 (18-130)||(12778196-12778310)
chr4 (19-69)||(52313545-52313595)
chr4 (18-92)||(19858380-19858455)
chr4 (18-83)||(22354655-22354720)
chr4 (18-130)||(3515736-3515849)
chr4 (18-70)||(14745700-14745752)
chr4 (67-154)||(15011521-15011607)
chr4 (113-209)||(53081397-53081492)
chr4 (23-130)||(11773-11881)
chr4 (18-69)||(26921509-26921560)
chr4 (7-101)||(51993530-51993624)
chr4 (113-227)||(21189057-21189170)
chr4 (118-227)||(26790099-26790209)
chr4 (166-227)||(15100038-15100099)
chr4 (63-227)||(8711375-8711536)
[»] scaffold0338 (1 HSPs)
scaffold0338 (3-227)||(10747-10971)
[»] scaffold0780 (1 HSPs)
scaffold0780 (18-228)||(2471-2682)
[»] chr8 (66 HSPs)
chr8 (18-227)||(37516450-37516659)
chr8 (1-202)||(13660837-13661039)
chr8 (1-202)||(13719480-13719682)
chr8 (13-227)||(19928753-19928967)
chr8 (18-227)||(21999438-21999647)
chr8 (2-225)||(22385062-22385282)
chr8 (5-227)||(22252303-22252523)
chr8 (102-227)||(21979551-21979676)
chr8 (18-141)||(1485225-1485350)
chr8 (18-141)||(4484103-4484228)
chr8 (18-141)||(14408658-14408783)
chr8 (18-141)||(14824599-14824724)
chr8 (18-109)||(19807394-19807485)
chr8 (18-141)||(45289761-45289886)
chr8 (18-141)||(18677276-18677401)
chr8 (18-141)||(20045409-20045534)
chr8 (17-227)||(21966700-21966902)
chr8 (18-141)||(24485254-24485379)
chr8 (104-227)||(44474780-44474903)
chr8 (118-228)||(16800202-16800312)
chr8 (2-227)||(22245222-22245445)
chr8 (107-227)||(20501319-20501438)
chr8 (113-220)||(17085399-17085505)
chr8 (2-130)||(16412619-16412748)
chr8 (118-226)||(22984409-22984517)
chr8 (102-209)||(2418085-2418191)
chr8 (18-141)||(5852507-5852631)
chr8 (18-141)||(22002578-22002703)
chr8 (104-227)||(34951275-34951398)
chr8 (18-219)||(21330677-21330876)
chr8 (18-130)||(1326445-1326558)
chr8 (118-226)||(22996558-22996666)
chr8 (18-130)||(32810423-32810536)
chr8 (18-141)||(4541584-4541709)
chr8 (18-109)||(22237050-22237141)
chr8 (113-227)||(28398332-28398445)
chr8 (19-127)||(42265510-42265619)
chr8 (118-227)||(22526253-22526362)
chr8 (18-130)||(19897243-19897356)
chr8 (18-130)||(20457407-20457520)
chr8 (123-227)||(22365399-22365503)
chr8 (18-130)||(24049339-24049452)
chr8 (18-130)||(27471737-27471850)
chr8 (18-130)||(32122457-32122570)
chr8 (19-130)||(20404008-20404120)
chr8 (102-181)||(21983036-21983115)
chr8 (18-100)||(22317911-22317993)
chr8 (102-209)||(40492112-40492218)
chr8 (113-227)||(20532628-20532741)
chr8 (19-141)||(23914807-23914931)
chr8 (18-101)||(3273859-3273942)
chr8 (18-130)||(11361246-11361359)
chr8 (18-130)||(15202306-15202419)
chr8 (123-227)||(19154116-19154220)
chr8 (118-226)||(22183888-22183996)
chr8 (18-130)||(38549133-38549246)
chr8 (113-208)||(17266238-17266332)
chr8 (166-209)||(39834439-39834482)
chr8 (113-227)||(22418679-22418792)
chr8 (18-59)||(17978416-17978457)
chr8 (18-59)||(22474767-22474808)
chr8 (19-52)||(25733821-25733854)
chr8 (18-123)||(37609722-37609828)
chr8 (114-226)||(11250872-11250984)
chr8 (6-54)||(20501218-20501266)
chr8 (98-154)||(43112945-43113000)
[»] scaffold0331 (1 HSPs)
scaffold0331 (1-209)||(12098-12307)
[»] scaffold0379 (2 HSPs)
scaffold0379 (2-227)||(3877-4104)
scaffold0379 (2-227)||(13871-14098)
[»] scaffold0065 (1 HSPs)
scaffold0065 (2-227)||(55783-56009)
[»] scaffold0529 (1 HSPs)
scaffold0529 (18-220)||(4016-4217)
[»] scaffold0151 (2 HSPs)
scaffold0151 (5-227)||(30951-31173)
scaffold0151 (18-130)||(36599-36712)
[»] scaffold0877 (1 HSPs)
scaffold0877 (18-227)||(1171-1382)
[»] scaffold0480 (1 HSPs)
scaffold0480 (18-209)||(10196-10387)
[»] chr2 (59 HSPs)
chr2 (18-228)||(24792759-24792969)
chr2 (4-228)||(24834009-24834233)
chr2 (18-141)||(39683139-39683264)
chr2 (20-141)||(24897411-24897534)
chr2 (20-141)||(24899894-24900017)
chr2 (20-141)||(24902371-24902494)
chr2 (20-141)||(24904848-24904971)
chr2 (18-141)||(18809766-18809891)
chr2 (18-141)||(23711227-23711352)
chr2 (6-109)||(27473417-27473520)
chr2 (18-141)||(32038711-32038836)
chr2 (18-109)||(34858192-34858283)
chr2 (18-109)||(34873254-34873345)
chr2 (20-138)||(24907323-24907443)
chr2 (18-141)||(23131685-23131810)
chr2 (18-141)||(23134152-23134277)
chr2 (18-141)||(26508680-26508805)
chr2 (18-141)||(34401736-34401861)
chr2 (18-138)||(572224-572347)
chr2 (7-141)||(22695158-22695294)
chr2 (113-227)||(27845401-27845514)
chr2 (18-130)||(28577939-28578053)
chr2 (18-141)||(23136391-23136516)
chr2 (18-141)||(26506202-26506327)
chr2 (18-141)||(27919978-27920103)
chr2 (113-227)||(18546238-18546351)
chr2 (18-141)||(38968303-38968425)
chr2 (19-141)||(9785466-9785589)
chr2 (22-109)||(20916268-20916355)
chr2 (19-130)||(24368555-24368668)
chr2 (18-130)||(22106194-22106307)
chr2 (18-130)||(23932189-23932302)
chr2 (18-130)||(32214250-32214363)
chr2 (19-130)||(6726776-6726888)
chr2 (18-127)||(18388190-18388300)
chr2 (18-92)||(24682204-24682278)
chr2 (18-227)||(26393166-26393374)
chr2 (121-227)||(25109633-25109739)
chr2 (113-227)||(34137708-34137821)
chr2 (113-209)||(23792057-23792152)
chr2 (18-130)||(45027220-45027333)
chr2 (7-81)||(19358879-19358954)
chr2 (18-69)||(28652552-28652603)
chr2 (113-227)||(22412409-22412522)
chr2 (35-141)||(22690562-22690670)
chr2 (18-83)||(23706346-23706412)
chr2 (18-130)||(24918869-24918982)
chr2 (166-209)||(18786158-18786201)
chr2 (166-209)||(22458835-22458878)
chr2 (19-130)||(24671754-24671866)
chr2 (17-55)||(12626426-12626464)
chr2 (113-227)||(20519416-20519529)
chr2 (131-209)||(23005533-23005611)
chr2 (19-154)||(23068408-23068544)
chr2 (19-69)||(25616578-25616628)
chr2 (113-227)||(43946613-43946726)
chr2 (166-227)||(23208061-23208122)
chr2 (19-123)||(21154136-21154241)
chr2 (6-54)||(23079862-23079910)
[»] scaffold0359 (1 HSPs)
scaffold0359 (18-227)||(16176-16385)
[»] chr3 (58 HSPs)
chr3 (2-127)||(46752049-46752174)
chr3 (18-208)||(14604725-14604914)
chr3 (18-227)||(16828281-16828490)
chr3 (18-227)||(37428458-37428667)
chr3 (18-109)||(6804892-6804983)
chr3 (6-227)||(11202065-11202285)
chr3 (18-141)||(17464001-17464126)
chr3 (18-141)||(34160149-34160274)
chr3 (18-141)||(45577655-45577780)
chr3 (18-141)||(1864367-1864492)
chr3 (18-141)||(10246936-10247061)
chr3 (18-141)||(15978358-15978483)
chr3 (18-109)||(52988858-52988949)
chr3 (18-141)||(55477315-55477440)
chr3 (118-227)||(15265926-15266035)
chr3 (18-141)||(7780559-7780684)
chr3 (18-141)||(13151002-13151127)
chr3 (18-141)||(13153470-13153595)
chr3 (6-227)||(9578389-9578609)
chr3 (2-130)||(12119169-12119298)
chr3 (18-109)||(14967145-14967236)
chr3 (18-141)||(15413254-15413379)
chr3 (18-141)||(16453489-16453614)
chr3 (18-141)||(28847833-28847958)
chr3 (18-92)||(13522202-13522276)
chr3 (5-141)||(6468335-6468473)
chr3 (19-141)||(14671709-14671832)
chr3 (2-130)||(46822990-46823119)
chr3 (19-130)||(13937295-13937407)
chr3 (132-227)||(15246805-15246900)
chr3 (19-130)||(41124668-41124780)
chr3 (18-127)||(49968859-49968969)
chr3 (113-227)||(13919615-13919728)
chr3 (19-154)||(22758835-22758971)
chr3 (18-130)||(55318624-55318737)
chr3 (18-92)||(24514251-24514325)
chr3 (19-130)||(38961158-38961271)
chr3 (113-227)||(320003-320116)
chr3 (19-154)||(18699431-18699567)
chr3 (113-227)||(23318031-23318144)
chr3 (18-83)||(8927555-8927620)
chr3 (5-130)||(10379868-10379994)
chr3 (18-82)||(20629512-20629577)
chr3 (18-83)||(22146768-22146833)
chr3 (18-83)||(37641504-37641569)
chr3 (18-55)||(45606140-45606177)
chr3 (19-130)||(16282079-16282191)
chr3 (19-130)||(17444084-17444196)
chr3 (170-209)||(21838236-21838275)
chr3 (67-192)||(37038925-37039051)
chr3 (6-101)||(40957199-40957293)
chr3 (19-92)||(13938301-13938374)
chr3 (19-154)||(43888756-43888892)
chr3 (166-227)||(1464781-1464842)
chr3 (105-154)||(12470759-12470808)
chr3 (161-210)||(14568742-14568791)
chr3 (169-222)||(42387104-42387157)
chr3 (113-209)||(37250412-37250507)
[»] scaffold0016 (3 HSPs)
scaffold0016 (6-209)||(118743-118944)
scaffold0016 (18-227)||(172109-172318)
scaffold0016 (19-130)||(184998-185110)
[»] chr1 (46 HSPs)
chr1 (228-325)||(42105846-42105943)
chr1 (18-141)||(51083101-51083226)
chr1 (18-141)||(13989689-13989814)
chr1 (18-109)||(21995664-21995755)
chr1 (18-141)||(14237655-14237780)
chr1 (18-141)||(21474298-21474423)
chr1 (18-141)||(21922503-21922628)
chr1 (18-141)||(23592944-23593069)
chr1 (113-227)||(20958872-20958985)
chr1 (18-130)||(41373308-41373422)
chr1 (268-328)||(42106152-42106212)
chr1 (18-141)||(16362743-16362868)
chr1 (113-220)||(21042600-21042706)
chr1 (118-225)||(21683742-21683849)
chr1 (18-127)||(22350658-22350768)
chr1 (18-227)||(48521255-48521463)
chr1 (113-227)||(22125042-22125155)
chr1 (5-192)||(51476869-51477058)
chr1 (1-227)||(47191345-47191570)
chr1 (18-141)||(21841594-21841719)
chr1 (113-227)||(22777206-22777320)
chr1 (123-209)||(27652495-27652581)
chr1 (18-101)||(21708118-21708201)
chr1 (18-101)||(21712661-21712744)
chr1 (18-101)||(48444360-48444443)
chr1 (19-130)||(22122168-22122280)
chr1 (19-130)||(41230941-41231053)
chr1 (18-92)||(46560056-46560130)
chr1 (113-227)||(52940122-52940235)
chr1 (18-123)||(22050350-22050456)
chr1 (18-130)||(9044518-9044631)
chr1 (102-222)||(16093105-16093224)
chr1 (18-130)||(16274573-16274686)
chr1 (18-69)||(43543494-43543545)
chr1 (18-59)||(14792563-14792604)
chr1 (18-51)||(29299050-29299083)
chr1 (18-51)||(34770627-34770660)
chr1 (18-59)||(41225454-41225495)
chr1 (18-59)||(41226707-41226748)
chr1 (18-51)||(42314751-42314784)
chr1 (18-101)||(7320594-7320677)
chr1 (166-202)||(16381903-16381939)
chr1 (14-54)||(20959045-20959085)
chr1 (169-209)||(41049322-41049362)
chr1 (113-209)||(50613334-50613429)
chr1 (113-209)||(50621162-50621257)
[»] scaffold0074 (2 HSPs)
scaffold0074 (18-227)||(8949-9159)
scaffold0074 (5-109)||(1899-2003)
[»] scaffold0054 (1 HSPs)
scaffold0054 (18-227)||(75025-75233)
[»] scaffold0005 (2 HSPs)
scaffold0005 (102-227)||(165701-165825)
scaffold0005 (102-209)||(268432-268538)
[»] scaffold0032 (1 HSPs)
scaffold0032 (5-109)||(68258-68362)
[»] scaffold0026 (2 HSPs)
scaffold0026 (18-109)||(22137-22228)
scaffold0026 (18-67)||(10103-10152)
[»] scaffold0012 (1 HSPs)
scaffold0012 (113-227)||(220427-220540)
[»] scaffold0716 (2 HSPs)
scaffold0716 (118-227)||(1905-2014)
scaffold0716 (5-123)||(5430-5549)
[»] scaffold0254 (2 HSPs)
scaffold0254 (18-141)||(21574-21699)
scaffold0254 (18-121)||(19116-19221)
[»] scaffold0153 (2 HSPs)
scaffold0153 (18-109)||(5258-5349)
scaffold0153 (18-109)||(12278-12369)
[»] scaffold0134 (1 HSPs)
scaffold0134 (18-141)||(38645-38770)
[»] scaffold0028 (6 HSPs)
scaffold0028 (18-141)||(135036-135161)
scaffold0028 (18-141)||(137505-137630)
scaffold0028 (18-141)||(139974-140099)
scaffold0028 (18-141)||(142443-142568)
scaffold0028 (18-141)||(144912-145037)
scaffold0028 (19-192)||(3053-3227)
[»] scaffold0023 (2 HSPs)
scaffold0023 (18-141)||(95234-95359)
scaffold0023 (2-130)||(16744-16873)
[»] scaffold0040 (6 HSPs)
scaffold0040 (113-227)||(22961-23075)
scaffold0040 (120-219)||(14113-14212)
scaffold0040 (18-141)||(13033-13158)
scaffold0040 (18-130)||(20573-20686)
scaffold0040 (28-130)||(43467-43570)
scaffold0040 (166-209)||(102936-102979)
[»] scaffold1419 (1 HSPs)
scaffold1419 (113-225)||(802-913)
[»] scaffold0297 (1 HSPs)
scaffold0297 (18-141)||(2918-3041)
[»] scaffold0174 (1 HSPs)
scaffold0174 (21-109)||(13598-13686)
[»] scaffold0546 (1 HSPs)
scaffold0546 (22-141)||(7860-7981)
[»] scaffold0230 (3 HSPs)
scaffold0230 (18-141)||(14773-14898)
scaffold0230 (18-130)||(22700-22813)
scaffold0230 (21-92)||(20527-20598)
[»] scaffold0109 (2 HSPs)
scaffold0109 (22-141)||(5326-5447)
scaffold0109 (18-141)||(19-144)
[»] scaffold0063 (1 HSPs)
scaffold0063 (18-141)||(38952-39077)
[»] scaffold0015 (1 HSPs)
scaffold0015 (17-227)||(209711-209913)
[»] chr5 (38 HSPs)
chr5 (18-141)||(29346804-29346929)
chr5 (18-141)||(29349277-29349402)
chr5 (18-141)||(29351750-29351875)
chr5 (18-141)||(39245959-39246084)
chr5 (53-125)||(19616477-19616549)
chr5 (21-92)||(26832599-26832670)
chr5 (18-141)||(38620259-38620384)
chr5 (18-141)||(39364207-39364332)
chr5 (113-227)||(21327507-21327620)
chr5 (18-141)||(20909837-20909963)
chr5 (18-227)||(26739797-26740005)
chr5 (18-141)||(42244576-42244701)
chr5 (133-227)||(25573691-25573785)
chr5 (133-227)||(25574926-25575020)
chr5 (133-227)||(25576119-25576213)
chr5 (18-130)||(2153952-2154065)
chr5 (2-81)||(21914476-21914556)
chr5 (18-130)||(23065350-23065464)
chr5 (18-141)||(263982-264107)
chr5 (5-164)||(21405615-21405776)
chr5 (18-130)||(17516290-17516403)
chr5 (18-130)||(24473803-24473916)
chr5 (18-130)||(29330702-29330815)
chr5 (19-130)||(20917168-20917280)
chr5 (118-209)||(22177445-22177536)
chr5 (113-204)||(23470558-23470648)
chr5 (18-83)||(10774664-10774730)
chr5 (113-227)||(26732079-26732192)
chr5 (166-227)||(21740893-21740954)
chr5 (18-83)||(40726667-40726732)
chr5 (18-74)||(20901326-20901382)
chr5 (2-174)||(41860565-41860738)
chr5 (113-204)||(23476269-23476359)
chr5 (18-132)||(31251892-31252006)
chr5 (5-59)||(26762413-26762467)
chr5 (166-208)||(27988251-27988293)
chr5 (18-59)||(14025807-14025848)
chr5 (18-90)||(21554303-21554374)
[»] scaffold0019 (3 HSPs)
scaffold0019 (18-128)||(158621-158733)
scaffold0019 (19-154)||(29986-30122)
scaffold0019 (18-130)||(21901-22014)
[»] scaffold0282 (1 HSPs)
scaffold0282 (2-227)||(17320-17543)
[»] scaffold0014 (1 HSPs)
scaffold0014 (118-227)||(203640-203749)
[»] scaffold0009 (1 HSPs)
scaffold0009 (18-207)||(191798-191986)
[»] scaffold0395 (1 HSPs)
scaffold0395 (5-109)||(11850-11954)
[»] scaffold0146 (1 HSPs)
scaffold0146 (18-141)||(22912-23038)
[»] scaffold0439 (1 HSPs)
scaffold0439 (18-101)||(12363-12446)
[»] scaffold0029 (1 HSPs)
scaffold0029 (18-141)||(12113-12238)
[»] scaffold1835 (1 HSPs)
scaffold1835 (113-227)||(51-164)
[»] scaffold0091 (1 HSPs)
scaffold0091 (113-227)||(31730-31843)
[»] scaffold0073 (1 HSPs)
scaffold0073 (118-220)||(57640-57742)
[»] scaffold0046 (2 HSPs)
scaffold0046 (113-227)||(16181-16294)
scaffold0046 (113-227)||(25368-25481)
[»] scaffold0031 (1 HSPs)
scaffold0031 (18-128)||(56220-56332)
[»] scaffold0347 (1 HSPs)
scaffold0347 (118-227)||(9644-9753)
[»] scaffold0175 (1 HSPs)
scaffold0175 (18-192)||(8518-8694)
[»] scaffold0577 (1 HSPs)
scaffold0577 (18-121)||(9008-9111)
[»] scaffold0485 (1 HSPs)
scaffold0485 (115-227)||(10893-11004)
[»] scaffold0695 (1 HSPs)
scaffold0695 (18-141)||(6768-6893)
[»] scaffold0444 (1 HSPs)
scaffold0444 (18-141)||(14217-14342)
[»] scaffold0301 (2 HSPs)
scaffold0301 (104-227)||(11400-11523)
scaffold0301 (104-227)||(15800-15923)
[»] scaffold0044 (1 HSPs)
scaffold0044 (18-141)||(41223-41348)
[»] scaffold0853 (1 HSPs)
scaffold0853 (113-203)||(46-135)
[»] scaffold0417 (1 HSPs)
scaffold0417 (113-227)||(373-486)
[»] scaffold0010 (2 HSPs)
scaffold0010 (113-227)||(1401-1514)
scaffold0010 (19-227)||(7053-7260)
[»] scaffold0004 (2 HSPs)
scaffold0004 (113-227)||(333080-333193)
scaffold0004 (63-227)||(204397-204557)
[»] scaffold0914 (1 HSPs)
scaffold0914 (118-227)||(2490-2599)
[»] scaffold0574 (1 HSPs)
scaffold0574 (18-131)||(7179-7293)
[»] scaffold0011 (1 HSPs)
scaffold0011 (118-227)||(37381-37490)
[»] scaffold1792 (1 HSPs)
scaffold1792 (18-130)||(1087-1200)
[»] scaffold0711 (1 HSPs)
scaffold0711 (18-130)||(6897-7010)
[»] scaffold0494 (1 HSPs)
scaffold0494 (18-130)||(36-149)
[»] scaffold0420 (1 HSPs)
scaffold0420 (123-227)||(5564-5668)
[»] scaffold0149 (1 HSPs)
scaffold0149 (18-130)||(34225-34338)
[»] scaffold0138 (1 HSPs)
scaffold0138 (123-227)||(17469-17573)
[»] scaffold0035 (2 HSPs)
scaffold0035 (18-130)||(107204-107317)
scaffold0035 (18-92)||(115744-115818)
[»] scaffold0454 (1 HSPs)
scaffold0454 (18-141)||(406-531)
[»] scaffold0363 (1 HSPs)
scaffold0363 (18-141)||(10069-10194)
[»] scaffold0169 (1 HSPs)
scaffold0169 (6-227)||(28684-28903)
[»] scaffold0008 (1 HSPs)
scaffold0008 (18-127)||(135504-135614)
[»] scaffold0007 (1 HSPs)
scaffold0007 (18-127)||(158822-158932)
[»] scaffold0708 (1 HSPs)
scaffold0708 (113-227)||(1698-1811)
[»] scaffold0357 (2 HSPs)
scaffold0357 (18-227)||(4709-4917)
scaffold0357 (166-227)||(13915-13976)
[»] scaffold0232 (1 HSPs)
scaffold0232 (25-141)||(4153-4270)
[»] scaffold0108 (1 HSPs)
scaffold0108 (153-227)||(3921-3995)
[»] scaffold0072 (1 HSPs)
scaffold0072 (114-227)||(58580-58692)
[»] scaffold0535 (1 HSPs)
scaffold0535 (18-130)||(7513-7626)
[»] scaffold0322 (1 HSPs)
scaffold0322 (18-130)||(18666-18779)
[»] scaffold0191 (1 HSPs)
scaffold0191 (18-130)||(3549-3662)
[»] scaffold0006 (2 HSPs)
scaffold0006 (123-227)||(97791-97895)
scaffold0006 (123-227)||(107069-107173)
[»] scaffold0686 (2 HSPs)
scaffold0686 (18-109)||(1400-1490)
scaffold0686 (166-227)||(2023-2084)
[»] scaffold0481 (1 HSPs)
scaffold0481 (18-92)||(4-78)
[»] scaffold0180 (2 HSPs)
scaffold0180 (18-127)||(28329-28439)
scaffold0180 (123-209)||(33773-33859)
[»] scaffold0145 (1 HSPs)
scaffold0145 (18-92)||(8147-8221)
[»] scaffold0043 (2 HSPs)
scaffold0043 (18-154)||(27892-28029)
scaffold0043 (18-82)||(10761-10826)
[»] scaffold0042 (1 HSPs)
scaffold0042 (19-130)||(43169-43281)
[»] scaffold0037 (1 HSPs)
scaffold0037 (6-127)||(81509-81631)
[»] scaffold0819 (1 HSPs)
scaffold0819 (18-83)||(5352-5418)
[»] scaffold0371 (1 HSPs)
scaffold0371 (5-59)||(10433-10487)
[»] scaffold0106 (1 HSPs)
scaffold0106 (113-227)||(18948-19061)
[»] scaffold0098 (2 HSPs)
scaffold0098 (104-226)||(24997-25119)
scaffold0098 (104-226)||(35867-35989)
[»] scaffold0034 (1 HSPs)
scaffold0034 (19-154)||(120869-121005)
[»] scaffold0261 (1 HSPs)
scaffold0261 (18-59)||(6420-6461)
[»] scaffold0107 (1 HSPs)
scaffold0107 (18-55)||(51328-51365)
[»] scaffold0452 (1 HSPs)
scaffold0452 (67-154)||(12673-12759)
[»] scaffold0278 (1 HSPs)
scaffold0278 (18-130)||(8661-8774)
[»] scaffold0251 (1 HSPs)
scaffold0251 (5-116)||(20073-20184)
[»] scaffold0235 (1 HSPs)
scaffold0235 (113-209)||(14368-14463)
[»] scaffold1296 (1 HSPs)
scaffold1296 (18-69)||(2045-2096)
[»] scaffold0848 (1 HSPs)
scaffold0848 (18-127)||(2021-2131)
[»] scaffold0747 (1 HSPs)
scaffold0747 (18-92)||(1476-1550)
[»] scaffold0308 (1 HSPs)
scaffold0308 (18-127)||(13382-13492)
[»] scaffold0039 (1 HSPs)
scaffold0039 (18-69)||(9928-9979)
[»] scaffold0411 (1 HSPs)
scaffold0411 (18-48)||(13417-13447)
[»] scaffold0306 (1 HSPs)
scaffold0306 (18-83)||(10660-10726)
[»] scaffold0081 (1 HSPs)
scaffold0081 (113-227)||(4097-4210)
[»] scaffold0077 (1 HSPs)
scaffold0077 (113-227)||(54907-55020)
[»] scaffold0020 (1 HSPs)
scaffold0020 (5-59)||(174232-174286)
[»] scaffold0630 (1 HSPs)
scaffold0630 (18-59)||(9074-9115)
[»] scaffold0401 (1 HSPs)
scaffold0401 (18-59)||(8832-8873)
[»] scaffold0162 (1 HSPs)
scaffold0162 (166-227)||(25621-25682)
[»] scaffold0122 (1 HSPs)
scaffold0122 (18-55)||(33837-33874)
[»] scaffold0117 (1 HSPs)
scaffold0117 (18-83)||(40219-40284)
[»] scaffold0048 (1 HSPs)
scaffold0048 (18-59)||(56984-57025)
[»] scaffold0319 (1 HSPs)
scaffold0319 (18-130)||(6050-6163)
[»] scaffold0317 (1 HSPs)
scaffold0317 (18-130)||(6257-6370)
[»] scaffold0290 (1 HSPs)
scaffold0290 (6-54)||(1088-1136)
[»] scaffold0125 (1 HSPs)
scaffold0125 (6-54)||(1039-1087)
[»] scaffold0053 (1 HSPs)
scaffold0053 (19-51)||(60745-60777)


Alignment Details
Target: chr6 (Bit Score: 255; Significance: 1e-142; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 2 - 341
Target Start/End: Complemental strand, 16966834 - 16966491
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt 101  Q
    ||||||||||||||| |||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16966834 tgccgatcgattatcctaagttaagggtgagactaacctttaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggttgtagtttt 16966735  T
Q  102 agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatcc-- 199  Q
    ||||||||||||||||  |||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||      
T  16966734 agaatttggggattagttttaaaagtgataaattgatgactagatgatggaaaactgttgaattgatgtagaaactgtgtacagaccttagataatccat 16966635  T
Q  200 --ataggatgatgattggaatcaattttaaaaacttgtgacaattacaagttgctctgtttgaagtaacgtgattttgtgattcaatgtctgaacagtgc 297  Q
      |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||    
T  16966634 atataggatgatgattggaatcaattttaaaaacctgtgacaattacaagttgctccgtttgaagtaaagtgattttatgattcaatgtatgaacagtgc 16966535  T
Q  298 aattgcaaaacttgatttattgggagaaggatgttgtatctgtg 341  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  16966534 aattgcaaaacttgatttattgggagaaggatgttgtatgtgtg 16966491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 5 - 227
Target Start/End: Original strand, 22375787 - 22376009
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttaga 104  Q
    |||||| | ||| |||||||||||||||||||||||||||||||  | ||||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  22375787 cgatcgttaatcctaaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaattgaatttaacatggttgtaggttggagttttaga 22375886  T
Q  105 atttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatagg 204  Q
    ||||| | |||||||||||||||||  |||||||||| |||||||| ||||||||||||| |||||||||||| ||| |||||||||| |||||||||||    
T  22375887 atttgagaattagggttaaaagtgaggaattgatgattagatgatgaaaaactgttgaattgatgtagaaactatgtacagaccttagataatccatagg 22375986  T
Q  205 atgatgattggaatcaattttaa 227  Q
    ||||| |||||||||| ||||||    
T  22375987 atgataattggaatcagttttaa 22376009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 228 - 330
Target Start/End: Complemental strand, 16914110 - 16914008
Alignment:
Q  228 aaacttgtgacaattacaagttgctctgtttgaagtaacgtgattttgtgattcaatgtctgaacagtgcaattgcaaaacttgatttattgggagaagg 327  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16914110 aaacttgtgacaattacgagttgctccgtttgaagtaacatgattttgtgattcaatgtcttaacagtgcaattgcaaaacttgatttattgggagaagg 16914011  T
Q  328 atg 330  Q
    |||    
T  16914010 atg 16914008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 20183788 - 20183575
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgact-ctgaaattgaatttaacatggttgtaggtagtagttt 100  Q
    ||||||||||||| | ||||||||||||||||||| | |||| || |||||||| | ||| | ||||||||| |||||||||| |   ||||  ||||||    
T  20183788 tgccgatcgattaacctaaggtaagggtgggactatcattcagtactcttaagtctatgatttctgaaattggatttaacatgtt---aggttttagttt 20183692  T
Q  101 t---agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaat 197  Q
    |   || ||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||  || |||||||||||||||| |||||||||| ||||    
T  20183691 ttcgaggatttgaggattagggttaaaagtgatgaattgaggattagatgatggaaaactgttagattgatgtagaaactgtgtacagaccttagataat 20183592  T
Q  198 ccataggatgatgattg 214  Q
    ||| | |||||| ||||    
T  20183591 ccacaagatgataattg 20183575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 22152203 - 22152416
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgact-ctgaaattgaatttaacatggttgtaggtagtagttt 100  Q
    ||||||||||||| | ||||||||||||||||||| | |||| || |||||||| | ||| | ||||||||| |||||||||| |   ||||  ||||||    
T  22152203 tgccgatcgattaacctaaggtaagggtgggactatcattcagtactcttaagtctatgatttctgaaattggatttaacatgtt---aggttttagttt 22152299  T
Q  101 t---agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaat 197  Q
    |   || ||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||  || |||||||||||||||| |||||||||| ||||    
T  22152300 ttcgaggatttgaggattagggttaaaagtgatgaattgaggattagatgatggaaaactgttagattgatgtagaaactgtgtacagaccttagataat 22152399  T
Q  198 ccataggatgatgattg 214  Q
    ||| | |||||| ||||    
T  22152400 ccacaagatgataattg 22152416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 25739373 - 25739164
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt---agaatttggggat 114  Q
    ||||||||||||||||||| | |||| | ||||||||| | ||| |||||||||| |||||||||| |   ||||  |||||||   |||||||| | ||    
T  25739373 taaggtaagggtgggactatcattcagtgatcttaagtctatgattctgaaattggatttaacatgtt---aggttttagtttttggagaatttgagaat 25739277  T
Q  115 tagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattg 214  Q
    |||||||||||||||||| |||||||| ||||| || |||  ||||||||  ||||||||||||||| |||||||| | |||| |||||||||||||||     
T  25739276 tagggttaaaagtgataatttgatgattagatggtgaaaatgtgttgaattaatgtagaaactgtgtacagacctttgataatgcataggatgatgatta 25739177  T
Q  215 gaatcaattttaa 227  Q
    |||||| ||||||    
T  25739176 gaatcagttttaa 25739164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 17229049 - 17229271
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagttt 100  Q
    |||||||||||| || ||||||||||||||||||||| ||||||  |||||||  | ||| ||| | ||||  |||||||||| ||||||||  ||||||    
T  17229049 tgccgatcgattttc-taaggtaagggtgggactaacattcaatcttcttaagcctatgattctaataattagatttaacatg-ttgtaggtt-tagttt 17229145  T
Q  101 t--agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatc 198  Q
    |  ||||||||   ||||||||||| |||||||| |||||||| |||||||| ||||||| ||||| |||||||||| ||||| |||||||||| |||||    
T  17229146 ttgagaatttgaa-attagggttaagagtgataa-ttgatgattagatgatg-aaaactgctgaattgatgtagaaagtgtgtacagaccttagataatc 17229242  T
Q  199 cataggatgatgattggaatcaattttaa 227  Q
    |||||| ||||| || |||||||||||||    
T  17229243 catagggtgatgtttagaatcaattttaa 17229271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 20137626 - 20137418
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||| ||||||||||||||| ||||||  |||||||  | ||| ||||| ||||  |||||||||| ||||||||  ||||||| |||||||||  |||    
T  20137626 taaggaaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatg-ttgtaggtt-tagttttgagaatttgga-att 20137530  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgg 215  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| ||||| |||||||||| ||||| |||||||| | ||||||||| | ||||| ||      
T  20137529 agggttaaaagtgatgaattgatgattagatgatgaaaaactgctgaattgatgtagaaagtgtgtacagaccttggataatccataaggtgatgtttat 20137430  T
Q  216 aatcaattttaa 227  Q
    ||||| ||||||    
T  20137429 aatcagttttaa 20137418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 22195243 - 22195451
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||| ||||||||||||||| ||||||  |||||||  | ||| ||||| ||||  |||||||||| ||||||||  ||||||| |||||||||  |||    
T  22195243 taaggaaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatg-ttgtaggtt-tagttttgagaatttgga-att 22195339  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgg 215  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| ||||| |||||||||| ||||| |||||||| | ||||||||| | ||||| ||      
T  22195340 agggttaaaagtgatgaattgatgattagatgatgaaaaactgctgaattgatgtagaaagtgtgtacagaccttggataatccataaggtgatgtttat 22195439  T
Q  216 aatcaattttaa 227  Q
    ||||| ||||||    
T  22195440 aatcagttttaa 22195451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 26923659 - 26923784
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||||||||||||| |||||||||  |||||||  |||||||||| ||    
T  26923659 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattgaatttaacat-gttgtaggttttagtttttgagaatttgggaat 26923757  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  26923758 tagggttaaaagtgattatttgatgat 26923784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 28103448 - 28103639
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttag-aatttggggatta 116  Q
    |||||||||||||||||||| ||||||||||  | ||||||||| ||||||  |||||||||||||||||||||| |  ||||||| || |||| || |     
T  28103448 taaggtaagggtgggactaatcttcaataattctgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaaaattggagaatt 28103547  T
Q  117 gggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
     |||| ||||||| ||||||||| | |  ||||| |||  ||||  || |||||||||| ||| | |||||||||| ||||||||||||||||    
T  28103548 aggtt-aaagtgagaaattgatgtttaattgatgaaaagttgttagattgatgtagaaattgtttacagaccttagataatccataggatgat 28103639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 18333806 - 18333931
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  18333806 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 18333904  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  18333905 tagggttaaaagtgattatttgatgat 18333931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 22783176 - 22783051
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  22783176 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggttttagtttttgagaatttgggaat 22783078  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  22783077 tagggttaaaagtgattatttgatgat 22783051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 24423495 - 24423370
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  24423495 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 24423397  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  24423396 tagggttaaaagtgattatttgatgat 24423370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 27852258 - 27852167
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    |||||||||||||||||||||||||||| ||  ||||||||||| ||||||  |||||||||||||||||||||| |  |||||||||||||    
T  27852258 taaggtaagggtgggactaaccttcaatcattctaagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaatttg 27852167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 33865226 - 33865101
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  33865226 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 33865128  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  33865127 tagggttaaaagtgattatttgatgat 33865101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 2290392 - 2290517
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    |||||||| |||||||||||| ||||||||||||||||   ||| |||| |||||||||||||||| ||||||||   |||||||  |||||||||| ||    
T  2290392 taaggtaaaggtgggactaacattcaataatcttaagtcattgattctgaaaattgaatttaacat-gttgtagggtttagtttttgagaatttgggaat 2290490  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  2290491 tagggttaaaagtgattatttgatgat 2290517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 12743268 - 12743143
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  12743268 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 12743170  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    || ||||||||||| | ||||||||||    
T  12743169 taaggttaaaagtggttaattgatgat 12743143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 17882710 - 17882834
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||||| ||    
T  17882710 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgcatttaacatg-ttgtaggtt-tagtttttgagaatttgggaat 17882807  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  17882808 tagggttaaaagtgattaattgatgat 17882834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 20733244 - 20733335
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| ||||||  | |||||||||||||||||||| |  |||||||||||||    
T  20733244 taaggtaagggtgagactaaccttcaataattttgagtatgtgattctgaagataaatttaacatggttgtaggttgaggttttagaatttg 20733335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 1540125 - 1540250
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||| ||| ||||||||||||||||   ||| |||  |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  1540125 taaggtaagggtgagacaaacattcaataatcttaagtcattgattctaaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 1540223  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  1540224 tagggttaaaagtgattaattgatgat 1540250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 8055978 - 8055854
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| || | |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  8055978 taaggtaagggtgggactaacattcaataatcttgagtctatgattccgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgggaat 8055881  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  8055880 tagggttaaaagtgattatttgatgat 8055854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 19858136 - 19858261
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| |||||| || |||||||||  |||||||  |||||||| | ||    
T  19858136 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaagat-gttgtaggttttagtttttgagaatttgagaat 19858234  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  19858235 tagggttaaaagtgattatttgatgat 19858261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 33862745 - 33862620
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||| | ||    
T  33862745 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgagaat 33862647  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  33862646 tagggttaaaagtggttaattgatgat 33862620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 18198677 - 18198791
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    |||| ||||||||||||  |||||||||| |||||||| |||| ||||  || |||||||||||||||  | |||||||| ||||||||||||||||       
T  18198677 attaaggttaaaagtgaggaattgatgattagatgatgaaaaattgttagattgatgtagaaactgtgcacggaccttagataatccataggatgatatc 18198776  T
Q  213 tggaatcaattttaa 227  Q
    |||||||||| ||||    
T  18198777 tggaatcaatattaa 18198791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 18343139 - 18343033
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  18343139 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 18343041  T
Q  115 tagggtta 122  Q
    ||||||||    
T  18343040 tagggtta 18343033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 27572168 - 27572232
Alignment:
Q  63 tctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggattagggttaaaagt 127  Q
    ||||||||||||||||||||||||||||||   |||||||||||||| | |||||||||||||||    
T  27572168 tctgaaattgaatttaacatggttgtaggttaaagttttagaatttgagaattagggttaaaagt 27572232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 34964038 - 34963909
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagttt 100  Q
    ||||||||| | ||| ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  ||||||    
T  34964038 tgccgatcgttaatcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagttt 34963941  T
Q  101 t--agaatttggggattagggttaaaagtgat 130  Q
    |  |||||||| | ||||||||||| ||||||    
T  34963940 ttgagaatttgagaattagggttaagagtgat 34963909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 22792529 - 22792636
Alignment:
Q  120 ttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatc 219  Q
    ||||||||||| |||||| ||| ||||||||||||  ||| |||| |||||||||| ||| | |||||||||| ||||||||| | ||||| || |||||    
T  22792529 ttaaaagtgatcaattgaggattagatgatggaaatttgtagaattgatgtagaaagtgtatacagaccttagataatccataaggtgatgtttagaatc 22792628  T
Q  220 aattttaa 227  Q
    | ||||||    
T  22792629 agttttaa 22792636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 16246270 - 16246069
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg-gggatta 116  Q
    |||||||||||||||||||||||||||||||  | ||| | | | ||| |||||||||||||||||||||||| | |   |||||||||||| | ||||     
T  16246270 taaggtaagggtgggactaaccttcaataattatgagtttctaattctaaaattgaatttaacatggttgtagattgagtttttagaatttgagagatt- 16246172  T
Q  117 gggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgga 216  Q
            |||||  |||||||||| |  ||||  |||||||| ||||  ||||||||| ||||| |||||||||| |||||||| ||||| | || |||    
T  16246171 --------agtgaggaattgatgattaattgataaaaaactgtcgaattaatgtagaaattgtgtacagaccttagataatccatgggatggtaatcgga 16246080  T
Q  217 atcaattttaa 227  Q
    |||| ||||||    
T  16246079 atcagttttaa 16246069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 2077251 - 2077128
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatta 116  Q
    |||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| |||||| || | |||| ||  ||||||| |||||||||| ||||    
T  2077251 aaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaatat-gctgtaagttttagttttgagaatttgggaatta 2077153  T
Q  117 gggttaaaagtgataaattgatgat 141  Q
    ||||||||| |||| | ||||||||    
T  2077152 gggttaaaattgattatttgatgat 2077128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 19401146 - 19401063
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt 101  Q
    |||||||||||||||||||||||||| ||||  ||||| | ||| |||| ||||||||||||||| |||||||||| ||||||||    
T  19401146 taaggtaagggtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaaca-ggttgtaggttgtagtttt 19401063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 23993087 - 23992958
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagttt 100  Q
    ||||||||| | ||| ||||||||||||||||||||| |||||||||||| ||| | | | |||| |||||| ||||||||| |||||||||  ||||||    
T  23993087 tgccgatcgttaatcttaaggtaagggtgggactaacattcaataatcttgagtctataattctgaaaattgtatttaacat-gttgtaggt-ttagttt 23992990  T
Q  101 t--agaatttggggattagggttaaaagtgat 130  Q
    |  |||||||| | ||||||||||| ||||||    
T  23992989 ttgagaatttgagaattagggttaagagtgat 23992958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 25721147 - 25721034
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  25721147 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 25721050  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  25721049 tagggttaagagtgat 25721034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 18454179 - 18453971
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||||||||||||||||||| ||||||  ||||||| || ||| ||||| ||||  |||||||||| ||||||||   | |||| ||||||||   |||    
T  18454179 taaggtaagggtgggactaacattcaatcttcttaagcatatgattctgataattagatttaacatg-ttgtaggtttaatttttgagaatttgaa-att 18454082  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgg 215  Q
    |||||||| |||||||| || ||||| |||||||| ||||| | ||||| ||||||||||    || || ||||||| ||||||||||| | ||| || |    
T  18454081 agggttaagagtgataa-ttaatgattagatgatgaaaaaccgctgaattgatgtagaaagaaggtacaaaccttagataatccatagggtaatgtttag 18453983  T
Q  216 aatcaattttaa 227  Q
    ||||| ||||||    
T  18453982 aatcagttttaa 18453971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 18259158 - 18259204
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataat 48  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||    
T  18259158 tgccaatcgattatcctaaggtaagggtgggactaaccttcaataat 18259204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 202
Target Start/End: Complemental strand, 18697494 - 18697299
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt-ag 103  Q
    |||||||| || ||||||||||||||||||| | ||||||  |||||||  | ||| ||||| ||||  |||||||||| ||| ||||  ||||||| ||    
T  18697494 gatcgattttcttaaggtaagggtgggactagcattcaatcttcttaagcctatgattctgataattagatttaacatg-ttggaggtt-tagttttgag 18697397  T
Q  104 aatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccata 202  Q
    |||| | | |||||| ||||||||||  |||||||||| |||||||| |||| ||||  || |||||||||| |||||  |||||||||  ||||||||    
T  18697396 aattggagaattagg-ttaaaagtgaggaattgatgattagatgatgaaaaagtgttagattgatgtagaaattgtgtatagaccttagacaatccata 18697299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 19772667 - 19772803
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgact-ctgaaa-ttgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    |||||||||||||||||| |||||||||||  ||||| | | | | |||||| ||| |||||||||| ||||||||  ||||||| || ||||||| |||    
T  19772667 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatg-ttgtaggtt-tagttttgaggatttgggaatt 19772764  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaa 154  Q
    ||||||||||||||||||||| |||| | ||||| ||||    
T  19772765 agggttaaaagtgataaattgttgattatatgattgaaa 19772803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 25753490 - 25753380
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  25753490 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 25753393  T
Q  115 tagggttaaaagt 127  Q
    |||||||| ||||    
T  25753392 tagggttagaagt 25753380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 25755660 - 25755550
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  25755660 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 25755563  T
Q  115 tagggttaaaagt 127  Q
    |||||||| ||||    
T  25755562 tagggttagaagt 25755550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 16198447 - 16198334
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  16198447 taaggtaagggtgtgactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 16198350  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  16198349 tagggttaagagtgat 16198334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 17027864 - 17027977
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  ||||| || | ||    
T  17027864 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatctgagaat 17027961  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  17027962 tagggttaagagtgat 17027977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 25536057 - 25535944
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  25536057 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 25535960  T
Q  115 tagggttaaaagtgat 130  Q
    || |||||| ||||||    
T  25535959 tatggttaagagtgat 25535944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 25689475 - 25689362
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  25689475 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 25689378  T
Q  115 tagggttaaaagtgat 130  Q
    ||| ||||| ||||||    
T  25689377 tagagttaagagtgat 25689362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 31629861 - 31629974
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  31629861 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 31629958  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  31629959 tagggttaagagtgat 31629974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 31734772 - 31734708
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa 69  Q
    |||||||||| | |||||||||||||||||||||||||  ||||| ||||||||| | |||||||    
T  31734772 cgatcgattaacctaaggtaagggtgggactaaccttctttaatcataagtatgtaattctgaaa 31734708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 9621628 - 9621751
Alignment:
Q  104 aatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatag 203  Q
    |||||||| |||||||| |||  |||||| ||| |||| ||||| || |||  ||||||||  ||||||||| ||| | |||| ||||| || | |||||    
T  9621628 aatttgggaattagggtaaaagatgataatttggtgattagatggtgaaaatgtgttgaattaatgtagaaattgtatacagatcttagatattgcatag 9621727  T
Q  204 gatgatgattggaatcaattttaa 227  Q
    |||||||||| |||||| ||||||    
T  9621728 gatgatgattagaatcagttttaa 9621751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 19363415 - 19363210
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttaga-atttggggatta 116  Q
    ||||||||||||| ||||||| ||||||  |||||||  | ||| |||||  ||  |||||||||| ||||||| | ||||||| || | ||||  ||||    
T  19363415 taaggtaagggtgagactaacattcaattttcttaagcctatgattctga--ttagatttaacatg-ttgtagg-attagttttggagaattggaaatta 19363320  T
Q  117 gggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgga 216  Q
    ||||||| |||||  | |||| ||| ||||||||||||  ||| |||| |||||||||| | | | |||||||||| ||||||||||| ||||| || ||    
T  19363319 gggttaagagtgagga-ttgaagattagatgatggaaacttgtagaattgatgtagaaagtttttacagaccttagataatccatagggtgatgtttaga 19363221  T
Q  217 atcaattttaa 227  Q
    |||| ||||||    
T  19363220 atcagttttaa 19363210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 202
Target Start/End: Complemental strand, 18707245 - 18707050
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt-ag 103  Q
    |||||||| || ||||||||||||||||||| | ||||||  |||||||    ||| ||||| ||||  |||||||||| ||| ||||  ||||||| ||    
T  18707245 gatcgattttcttaaggtaagggtgggactagcattcaatcttcttaagcccatgattctgataattagatttaacatg-ttggaggtt-tagttttgag 18707148  T
Q  104 aatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccata 202  Q
    |||| | | |||||| ||||||||||  |||||||||| |||||||| |||| ||||  || |||||| ||||||||| |||| |||||  ||||||||    
T  18707147 aattggagaattagg-ttaaaagtgaggaattgatgattagatgatgaaaaagtgttagattgatgtaaaaactgtgtacagatcttagacaatccata 18707050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 23527396 - 23527509
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||| || ||||||| |  ||||| |||| || ||||| |||||||||| ||||| |||||||||| ||||||  | |||||| ||    
T  23527396 attagggttaagagtgat-aagtgatgattaattgatgaaaaattgctgaattgatgtagaaagtgtgtacagaccttagataatccgcaagatgattat 23527494  T
Q  213 tggaatcaattttaa 227  Q
     ||||||| ||||||    
T  23527495 aggaatcagttttaa 23527509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 35012017 - 35011931
Alignment:
Q  123 aaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    ||||||| ||||||||||| |  ||||| |||| ||||  || |||||||||||||||| ||||||||||  |||||||||| ||||    
T  35012017 aaagtgagaaattgatgattaattgatgaaaaattgttagattgatgtagaaactgtgtacagaccttagacaatccataggttgat 35011931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 1599082 - 1599017
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatg 83  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||||    
T  1599082 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg 1599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 8226740 - 8226805
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatg 83  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| |||||||||| ||||||||||    
T  8226740 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaaattggatttaacatg 8226805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 23531896 - 23531961
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatg 83  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| |||||||||| ||||||||||    
T  23531896 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaaattggatttaacatg 23531961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 19669226 - 19669183
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||||| | |||||||||| ||||||||||||||||    
T  19669226 gatgtagaaactgtatacagaccttagataatccataggatgat 19669183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 19005990 - 19005924
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatg 83  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||||    
T  19005990 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg 19005924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 18914966 - 18914933
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatctt 51  Q
    ||||||||||||||||||||| ||||||||||||    
T  18914966 taaggtaagggtgggactaacattcaataatctt 18914933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 207
Target Start/End: Complemental strand, 23539790 - 23539701
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatg 207  Q
    |||||||||||| ||||||||||| |  ||||| |||  ||||  || |||||||||||||| | ||||||||||  |||||||| ||||    
T  23539790 ggttaaaagtgagaaattgatgattaattgatgaaaagttgttagattgatgtagaaactgtatacagaccttagacaatccataagatg 23539701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 9097747 - 9097842
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||| | || ||||||| ||| |  ||||| | |||||||  || |||||||||||||| | |||||||||| |||||||||| |||||    
T  9097747 attagggttaaa-gagagaaattgaggattaattgatgtagaactgttagattgatgtagaaactgtttacagaccttagataatccatagaatgat 9097842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 30676039 - 30676152
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| | |||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  30676039 taaggtaagggtgagactaacatgcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 30676136  T
Q  115 tagggttaaaagtgat 130  Q
    ||| ||||| ||||||    
T  30676137 tagagttaagagtgat 30676152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 151; Significance: 8e-80; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 499126 - 498900
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt 101  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  499126 tgccaatcgattatcctaaggtaagggtgggactaaccttcaataattttgagtatgtgattctgaaaatgaatttaacatggttgtaggttgtagtttt 499027  T
Q  102 agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccat 201  Q
    |||||||||| ||||||||||||||| || |||||||||| |||||||||| ||||||||||| |||||||||||||||| |||||||||| ||| ||||    
T  499026 agaatttgggaattagggttaaaagtaatgaattgatgattagatgatggagaactgttgaattgatgtagaaactgtgtacagaccttagataacccat 498927  T
Q  202 aggatgatgattggaatcaattttaaa 228  Q
     ||||||| |||||||||| |||||||    
T  498926 tggatgataattggaatcagttttaaa 498900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 447465 - 447257
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaa-attgaatttaacatggttgtaggtagtagttttaga-atttggggatt 115  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| |||||  |||  |||||||||| |||||||   ||||||| || | ||||  |||    
T  447465 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatg-ttgtagggt-tagtttttgagaattggaaatt 447368  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgg 215  Q
    |||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| ||||| |||||||||| ||||||||||| ||||| || |    
T  447367 agggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatccatagggtgatgtttag 447269  T
Q  216 aatcaattttaa 227  Q
    ||||||||||||    
T  447268 aatcaattttaa 447257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 498280 - 498167
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| |||||  ||||||||| ||||||||||| | ||| |    
T  498280 attagggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtatagaccttagataatccatagggttatgtt 498182  T
Q  213 tggaatcaattttaa 227  Q
    |  ||||||||||||    
T  498181 tataatcaattttaa 498167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 152111 - 152176
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatg 83  Q
    ||||||||||||||||||| | |||| ||||||||||| | | | |||||||||||||||||||||    
T  152111 taaggtaagggtgggactatcattcagtaatcttaagtttataattctgaaattgaatttaacatg 152176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 501906 - 501793
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||| |||| |||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  501906 taaggtaagtgtggtactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 501809  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  501808 tagggttaagagtgat 501793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 15203241 - 15203021
Alignment:
Q  7 atcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaat 106  Q
    |||||||||| |||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||||||||||||||||||||| |||||||||||||    
T  15203241 atcgattatcctaaggtaagggtgggactaaccttcaataattatgagtatgtgattctgaaaatgaatttaacatggttgtaggttgtagttttagaat 15203142  T
Q  107 ttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggat 206  Q
    ||||| |||| ||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  15203141 ttgggaattacggttaaaagtgatgaattgaggattagatgatggaaaactgttgaattgatgtagaaactgtgtacagaccttagataatccataggat 15203042  T
Q  207 gatgattggaatcaattttaa 227  Q
    |||  ||||||||| ||||||    
T  15203041 gatagttggaatcagttttaa 15203021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 9724802 - 9725003
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggattag 117  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||||| || |  ||||||||||||| | |||||    
T  9724802 taaggtaagggtgggactaaccttaaataatcttgagtatgtgaatctgatattgaatttaacatggttgtatgttgaggttttagaatttgagaattag 9724901  T
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||  |||||||||| ||||||| |||||||||||| | |||| ||||||||||| || ||||||  ||||||||||||||||||||||||    
T  9724902 ggttaaaagtgaggaattgatgattagatgatagaaaactgttgagttgatggagaaactgtgtacataccttatataatccataggatgatgattggaa 9725001  T
Q  218 tc 219  Q
    ||    
T  9725002 tc 9725003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 14980658 - 14980843
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaa 105  Q
    |||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |   |||||| |    
T  14980658 gatcgattttcttaaggtaagggtgggactaaccttcaataatcttgagtatgtgattctgaaattgaatttaacatggttgtaggttgagtttttagga 14980757  T
Q  106 tttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagacctta 191  Q
    |||  | |||||||||||||||||  |||||||||| ||||||| |||||||||||||| ||||| |||||||||| |||||||||    
T  14980758 ttttagaattagggttaaaagtgaagaattgatgattagatgatagaaaactgttgaattgatgttgaaactgtgtacagacctta 14980843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 15410134 - 15410319
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaa 105  Q
    |||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |   |||||| |    
T  15410134 gatcgattttcttaaggtaagggtgggactaaccttcaataatcttgagtatgtgattctgaaattgaatttaacatggttgtaggttgagtttttagga 15410233  T
Q  106 tttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagacctta 191  Q
    |||  | |||||||||||||||||  |||||||||| ||||||| |||||||||||||| ||||| |||||||||| |||||||||    
T  15410234 ttttagaattagggttaaaagtgaagaattgatgattagatgatagaaaactgttgaattgatgttgaaactgtgtacagacctta 15410319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 13893498 - 13893289
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt---agaatttggggat 114  Q
    ||||||||||||||||||| | |||| | ||||||||| | ||| |||||||||| |||||||||| |   ||||  |||||||   |||||||| | ||    
T  13893498 taaggtaagggtgggactatcattcagtgatcttaagtctatgattctgaaattggatttaacatgtt---aggttttagtttttggagaatttgagaat 13893402  T
Q  115 tagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattg 214  Q
    | ||||| |||||||||| |||||||| ||||| ||||||  |||||||   ||||||||||||||| || ||||||| |||| |||||||||||||||     
T  13893401 ttgggttgaaagtgataatttgatgattagatggtggaaacgtgttgaagtaatgtagaaactgtgtacataccttagataatgcataggatgatgatta 13893302  T
Q  215 gaatcaattttaa 227  Q
    |||||| ||||||    
T  13893301 gaatcagttttaa 13893289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 11085584 - 11085481
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaa 105  Q
    |||||||| || |||||||||||||||||||||||||||||||  | ||||||||| ||||||  |||||||||||||||||||||| |  |||||||||    
T  11085584 gatcgattttcttaaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaa 11085485  T
Q  106 tttg 109  Q
    ||||    
T  11085484 tttg 11085481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 457271 - 457146
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  457271 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 457173  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  457172 tagggttaaaagtgattatttgatgat 457146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 15375927 - 15376052
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  15375927 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 15376025  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  15376026 tagggttaaaagtgattatttgatgat 15376052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 20384337 - 20384462
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  20384337 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 20384435  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  20384436 tagggttaaaagtgattatttgatgat 20384462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 16233471 - 16233345
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg--aaattgaatttaacatggttgtaggtagtagtttt--agaatttgggga 113  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| ||||  |||||| ||||||||| |||||||||  |||||||  |||||||||| |    
T  16233471 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaa 16233373  T
Q  114 ttagggttaaaagtgataaattgatgat 141  Q
    ||||||||||||||||| | ||||||||    
T  16233372 ttagggttaaaagtgattatttgatgat 16233345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 11392516 - 11392639
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||  |||||||||| |||||||  |||||||||| ||    
T  11392516 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaaca--gttgtaggta-tagtttttgagaatttgggaat 11392612  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  11392613 tagggttaaaagtgattatttgatgat 11392639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 13870294 - 13870169
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||| | ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  13870294 taaggtaagggtgggactagcattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 13870196  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  13870195 tagggttaaaagtgattatttgatgat 13870169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 16411008 - 16410883
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  ||||||| || ||    
T  16411008 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaattttggaat 16410910  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  16410909 tagggttaaaagtgattatttgatgat 16410883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 27217809 - 27217685
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  27217809 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggt-ttagtttttgagaatttgggaat 27217712  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  27217711 tagggttaaaagtgattatttgatgat 27217685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 32126439 - 32126314
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||| ||| ||||||||||||||||   ||| |||  |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  32126439 taaggtaagggtgggacaaacattcaataatcttaagtcattgattctaaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 32126341  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  32126340 tagggttaaaagtgattaattgatgat 32126314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 41523868 - 41523743
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||    || |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  41523868 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 41523770  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  41523769 tagggttaaaagtggttaattgatgat 41523743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 8135238 - 8135347
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttta-gaatttggggatta 116  Q
    ||||||||||||| |||||||||||| ||||| ||||| | ||| ||||||||||||||||||| |||||||||| ||||||||| ||||||| | ||||    
T  8135238 taaggtaagggtgagactaaccttcactaatcctaagtgtatgattctgaaattgaatttaaca-ggttgtaggttgtagttttaggaatttgagaatta 8135336  T
Q  117 gggttaaaagt 127  Q
    || ||| ||||    
T  8135337 ggtttagaagt 8135347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 192
Target Start/End: Complemental strand, 11054778 - 11054589
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-a 102  Q
    ||||||||||   |||||||||||||||||||||||||||| ||  ||||| | ||| |||| ||||||||||||||| |||||||||| ||| ||||      
T  11054778 cgatcgattaaactaaggtaagggtgggactaaccttcaatgattctaagtgtttgattctgaaaattgaatttaaca-ggttgtaggttgtaattttgg 11054680  T
Q  103 gaatttggg-gattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttag 192  Q
    |||||||||  |||||||||| ||||  ||| | | |||| ||||||| |||| |||||||||  ||| |||||| |||| ||||||||||    
T  11054679 gaatttgggaaattagggttataagttgtaattggttgattagatgatagaaacctgttgaattaatgaagaaacagtgttcagaccttag 11054589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 11768188 - 11768297
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||| |||||| ||| ||||||||||||  ||| |||| |||||||||| ||| | |||||||||| ||||||||||| ||||| || |||    
T  11768188 ggttaaaagtgatcaattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtttacagaccttagataatccatagggtgatgtttagaa 11768287  T
Q  218 tcaattttaa 227  Q
    ||| ||||||    
T  11768288 tcagttttaa 11768297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 11091710 - 11091610
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaa 105  Q
    |||||||| || ||||||||||||||||||||||||||| |||  | ||||||||| | ||||  |||||||||||||||||||||| |  |||||||||    
T  11091710 gatcgattttcttaaggtaagggtgggactaaccttcaacaattctgagtatgtgattatgaagatgaatttaacatggttgtaggttgaggttttagaa 11091611  T
Q  106 t 106  Q
    |    
T  11091610 t 11091610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 16997155 - 16996936
Alignment:
Q  7 atcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaa-attgaatttaacatggttgtagg--tagtagttttag 103  Q
    ||||||| || ||||||||||||||||||||| ||||||  |||||||  | ||| |||||  |||  |||||||||| |||||||  ||||  ||||||    
T  16997155 atcgattttcttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatg-ttgtagggttagtt-ttttag 16997058  T
Q  104 aatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatag 203  Q
    |||| |   ||||||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| ||||| |||||||||| |||||||||     
T  16997057 aatt-gtaaattagggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatccataa 16996960  T
Q  204 gatgatgattggaatcaattttaa 227  Q
    | ||||| || |||||| ||||||    
T  16996959 ggtgatgtttagaatcagttttaa 16996936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 41526327 - 41526205
Alignment:
Q  21 ggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggattag 117  Q
    |||||||||||||||||| ||||||||||||||||    || |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| |||||    
T  41526327 ggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaattag 41526229  T
Q  118 ggttaaaagtgataaattgatgat 141  Q
    ||||||||||| | ||||||||||    
T  41526228 ggttaaaagtggttaattgatgat 41526205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 18628514 - 18628389
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    |||||||||||||||| |||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  18628514 taaggtaagggtgggaataacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 18628416  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    ||||||||||| |||| | ||||||||    
T  18628415 tagggttaaaaatgattatttgatgat 18628389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 26355194 - 26355318
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| || | |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  26355194 taaggtaagggtgggactaacattcaataatcttgagtctatgattccgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgggaat 26355291  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  26355292 tagggttaaaagtgattatttgatgat 26355318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 26357646 - 26357770
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| || | |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  26357646 taaggtaagggtgggactaacattcaataatcttgagtctatgattccgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgggaat 26357743  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  26357744 tagggttaaaagtgattatttgatgat 26357770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 130037 - 130150
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| ||||| |||||| ||| ||||||||||| ||||| |    
T  130037 attagggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccatagataatccatagggtgatgtt 130135  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  130136 tagaatcagttttaa 130150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 15095637 - 15095810
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    |||||||||||||||||||||||||| ||||  ||||| | ||| |||| ||||||||||||||| |||||||||| ||||||||  ||||||||| |||    
T  15095637 taaggtaagggtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaaca-ggttgtaggttgtagttttgggaatttgggaatt 15095735  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagacctt 190  Q
    ||| ||| ||||  ||| | | ||||   ||  | |||| ||||||||| ||||||||||| |||| ||||||||    
T  15095736 aggtttagaagttgtaattagttgatttaatagtagaaatctgttgaattgatgtagaaacagtgttcagacctt 15095810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 16460036 - 16460160
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    ||||||||||| |||||||| ||||| ||||||||||   ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||||| |||    
T  16460036 aaggtaagggttggactaacattcaacaatcttaagtcattgattctgaaaattggatttaacatg-ttgtaggttttagtttttgagaatttgggaatt 16460134  T
Q  116 agggttaaaagtgataaattgatgat 141  Q
    ||||||||||||||| | ||||||||    
T  16460135 agggttaaaagtgattatttgatgat 16460160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 18431661 - 18431536
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| |||| |||| |||||||||  |||||||  |||||||| | ||    
T  18431661 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggattttacat-gttgtaggttttagtttttgagaatttgagaat 18431563  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    ||| |||||||||||| | ||||||||    
T  18431562 tagagttaaaagtgattatttgatgat 18431536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 18641220 - 18641095
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    |||||||||||||||| |||| ||||||||||||||||   ||| |||| |||||| |||||| || |||||||||  |||||||  |||||||||| ||    
T  18641220 taaggtaagggtgggaataacattcaataatcttaagtcattgattctgaaaattggatttaatat-gttgtaggttttagtttttgagaatttgggaat 18641122  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    ||||||||||| |||| | ||||||||    
T  18641121 tagggttaaaaatgattatttgatgat 18641095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 16580668 - 16580544
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    ||||||||||| |||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||  |||    
T  16580668 aaggtaagggttggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttggaaatt 16580570  T
Q  116 agggttaaaagtgataaattgatgat 141  Q
    || |||||||||||| | ||||||||    
T  16580569 agagttaaaagtgattatttgatgat 16580544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 42462923 - 42462715
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaa-attgaatttaacatggttgtagg--tagtagttttagaatttggggat 114  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| |||||  |||  |||||||||| |||||||  ||||  |||||||||| ||  ||    
T  42462923 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatg-ttgtagggttagtt-ttttagaatt-ggaaat 42462827  T
Q  115 tagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattg 214  Q
    || |||||| |||||||| |||| ||| ||||||||||||  ||| |||| ||||| |||| |||||  ||||||||| ||||||||||| ||||| ||     
T  42462826 taaggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgttgaaagtgtgtatagaccttagataatccatagggtgatgttta 42462728  T
Q  215 gaatcaattttaa 227  Q
    |||||| ||||||    
T  42462727 gaatcagttttaa 42462715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 5294432 - 5294545
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  5294432 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 5294529  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  5294530 tagggttaagagtgat 5294545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 8941316 - 8941203
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  8941316 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 8941219  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  8941218 tagggttaagagtgat 8941203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 36685146 - 36685249
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttag-aatttggggatta 116  Q
    |||||||||||||| || |||||||||||||  | ||||||| | ||||||| || |||||||| |||||||||| |||||||| | |||||||| ||||    
T  36685146 taaggtaagggtggaaccaaccttcaataattctgagtatgtaattctgaaactggatttaaca-ggttgtaggttgtagttttggaaatttgggaatta 36685244  T
Q  117 gggtt 121  Q
    |||||    
T  36685245 gggtt 36685249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 11973196 - 11973084
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | |||    
T  11973196 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaatt 11973099  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  11973098 agggttaagagtgat 11973084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 14948333 - 14948458
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||| ||||||   ||| |||| |||||| ||||||||| ||||||| |  | |||||  |||||||| | ||    
T  14948333 taaggtaagggtgggactaacattcaataatattaagtcattgattctgaaaattggatttaacat-gttgtagcttttcgtttttgagaatttgagaat 14948431  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  14948432 tagggttaaaagtggttaattgatgat 14948458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 15140265 - 15140155
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||||| ||||| |||||||||||| ||||  ||||| | ||| |||| ||||||||||||||| |||||||||| ||||||||  ||||||||| |||    
T  15140265 taaggtatgggtgagactaaccttcactaattctaagtgtatgattctgaaaattgaatttaaca-ggttgtaggttgtagttttgggaatttgggaatt 15140167  T
Q  116 agggttaaaagt 127  Q
    ||| ||||||||    
T  15140166 aggtttaaaagt 15140155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 15624070 - 15623988
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt 101  Q
    ||||||||||||| |||||||||||||||||  ||||| | ||| ||||||||||||||||| | |||||||| | ||||||||    
T  15624070 taaggtaagggtgagactaaccttcaataattctaagtgtatgattctgaaattgaatttaata-ggttgtagtttgtagtttt 15623988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 46579759 - 46579850
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    ||||||||||||||||  |||||||||||||    ||||||||| ||||||  |||||||||||||||||||||| |   ||||||||||||    
T  46579759 taaggtaagggtgggaacaaccttcaataattcagagtatgtgattctgaagatgaatttaacatggttgtaggttgagattttagaatttg 46579850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 9176835 - 9177043
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||| | ||||||  | |||||| ||| | ||||| |||| ||||||||| |  |||||| | |||||||  |||||||| ||||    
T  9176835 taaggtaagggtgagactagcattcaattttattaagtctgtaattctgataattaaatttaacaag--tgtagg-attagttttagagaatttgaggat 9176931  T
Q  115 tagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattg 214  Q
    ||||||||| |||||  |||||||||| |  ||||| |||  ||||  || |||||||||||||||| |||||| |||  |||||||||||||||   ||    
T  9176932 tagggttaagagtga-gaattgatgattaattgatgaaaatttgttagattgatgtagaaactgtgtacagaccctagacaatccataggatgatatctg 9177030  T
Q  215 gaatcaattttaa 227  Q
    |||||||| ||||    
T  9177031 gaatcaatgttaa 9177043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 11524893 - 11525007
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    |||||||||| ||||||| |||||| |||  |||||||||||  ||| |||| |||||||||| ||| | || ||||||| ||||||||| | ||||| |    
T  11524893 attagggttataagtgatcaattgaggatttgatgatggaaatttgtagaattgatgtagaaagtgtttacataccttagataatccatatggtgatgtt 11524992  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  11524993 tagaatcagttttaa 11525007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 14259445 - 14259323
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgact-ctgaaa-ttgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    |||||||||||||||||| |||||||||||  ||||| | | | | |||||| ||| |||||||||| |||||| |  ||||||| |||||||||| |||    
T  14259445 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatg-ttgtagtt--tagttttgagaatttgggaatt 14259349  T
Q  116 agggttaaaagtgataaattgatgat 141  Q
    ||||||||||||||||||||| ||||    
T  14259348 agggttaaaagtgataaattgttgat 14259323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 5295605 - 5295718
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| | ||||||| |||||||||  |||||||  |||||||| | ||    
T  5295605 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtaattaacat-gttgtaggt-ttagtttttgagaatttgagaat 5295702  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  5295703 tagggttaagagtgat 5295718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 5296778 - 5296891
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| | ||||||| |||||||||  |||||||  |||||||| | ||    
T  5296778 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtaattaacat-gttgtaggt-ttagtttttgagaatttgagaat 5296875  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  5296876 tagggttaagagtgat 5296891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 8469384 - 8469271
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||| || ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  8469384 taaggtaagggtgggactaacattcaataattttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 8469287  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  8469286 tagggttaagagtgat 8469271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 9945010 - 9945123
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  9945010 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 9945107  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  9945108 tagggttaagagtgat 9945123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 20485018 - 20484903
Alignment:
Q  27 ggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggattagggttaaa 124  Q
    |||||||||||| ||||||||||||||||   ||| |||| ||||||||||||| || |||||| ||  ||||||| ||||||||||  |||||||||||    
T  20485018 ggtgggactaacattcaataatcttaagtcattgattctgaaaattgaatttaatat-gttgtaagttttagttttgagaatttgggatttagggttaaa 20484920  T
Q  125 agtgataaattgatgat 141  Q
    | |||| | ||||||||    
T  20484919 attgattatttgatgat 20484903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 23461633 - 23461746
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  23461633 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 23461730  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  23461731 tagggttaagagtgat 23461746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 45846765 - 45846878
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| | || |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  45846765 taaggtaagggtgggactaacattcaataatcttgagtctctgattttgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 45846862  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  45846863 tagggttaagagtgat 45846878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 24703172 - 24703098
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||    
T  24703172 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggt 24703098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 24705619 - 24705545
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||    
T  24705619 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggt 24705545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 30820151 - 30820233
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt 101  Q
    |||||| ||||||||||||||||||| ||||  | ||||||| | ||||||| || |||||||| |||||||||| ||||||||    
T  30820151 taaggtgagggtgggactaaccttcagtaattctgagtatgtaattctgaaactggatttaaca-ggttgtaggttgtagtttt 30820233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 14269084 - 14269150
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatg 83  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||||    
T  14269084 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg 14269150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 17016689 - 17016802
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| ||||| || |||||| | |||||||| | ||  || |||| |||||||||| ||| | |||||||||| |||||| |||| ||||| |    
T  17016689 attagggttaagagtgagaa-ttgatggttagatgatgtagaatggtagaattgatgtagaaagtgtttacagaccttagataatccgtagggtgatgtt 17016787  T
Q  213 tggaatcaattttaa 227  Q
    | |||||||||||||    
T  17016788 tagaatcaattttaa 17016802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 12902173 - 12902112
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    |||||||||||||| | |||||||||| |||||||||||||||| |  ||||||||| ||||    
T  12902173 gatgtagaaactgtttacagaccttagataatccataggatgattacaggaatcaatattaa 12902112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 227
Target Start/End: Original strand, 13848987 - 13849115
Alignment:
Q  98 ttttagaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaat 197  Q
    |||||||||||||  |||||||||||||||  || ||||||||| | || |||||||| |||||||| | || | ||||||||| || ||||||    ||    
T  13848987 ttttagaatttgga-attagggttaaaagttgtagattgatgattaaataatggaaaaatgttgaattggtgcaaaaactgtgtacaaaccttaaaagat 13849085  T
Q  198 ccataggatgatgattggaatcaattttaa 227  Q
     |||||| ||||| || |||||||||||||    
T  13849086 tcataggttgatgtttagaatcaattttaa 13849115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 19485973 - 19486038
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatg 83  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| |||||||||| ||||||||||    
T  19485973 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaaattggatttaacatg 19486038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 1867336 - 1867440
Alignment:
Q  123 aaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaat 222  Q
    |||||||  |||||||||| |  ||||| |||| ||||  || |||||||||||||| | |||||||||| ||||||||||  ||||  |||||||||||    
T  1867336 aaagtgaggaattgatgattaattgatgaaaaagtgttagattgatgtagaaactgtttacagaccttagataatccatagtttgatatttggaatcaat 1867435  T
Q  223 tttaa 227  Q
     ||||    
T  1867436 gttaa 1867440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 14037066 - 14036962
Alignment:
Q  123 aaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaat 222  Q
    |||||||  |||||||||| |  ||||| |||| ||||  || |||||||||||||| | |||||||||| ||||| ||||| ||||  |||||||||||    
T  14037066 aaagtgaggaattgatgattaattgatgaaaaattgttagattgatgtagaaactgtttacagaccttagataatcaataggttgatatttggaatcaat 14036967  T
Q  223 tttaa 227  Q
     ||||    
T  14036966 gttaa 14036962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 14347096 - 14346992
Alignment:
Q  123 aaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaat 222  Q
    |||||||  |||||||||| |  ||||| |||| ||||  || |||||||||||||| | |||||||||| ||||| ||||| ||||  |||||||||||    
T  14347096 aaagtgaggaattgatgattaattgatgaaaaattgttagattgatgtagaaactgtttacagaccttagataatcaataggttgatatttggaatcaat 14346997  T
Q  223 tttaa 227  Q
     ||||    
T  14346996 gttaa 14346992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 15007744 - 15007839
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||| |||| ||||||| ||| |  ||||| |||  ||||  || |||||||||||||| | |||||||||| ||||||||||||||||    
T  15007744 attagggttaaa-gtgagaaattgaggattaattgatgaaaagttgttagattgatgtagaaactgtttacagaccttagataatccataggatgat 15007839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 21188926 - 21189031
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtagg--tagtagttttagaatttggggatt 115  Q
    |||||||||||||||||||| || ||||||||| ||| | ||| |||| |||||| ||||||||| ||||||||  ||||  |||||||||||| | |||    
T  21188926 aaggtaagggtgggactaacatttaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagt-tttttagaatttgagaatt 21189023  T
Q  116 agggttaa 123  Q
    ||||||||    
T  21189024 agggttaa 21189031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 32302278 - 32302141
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgact-ctgaaa--ttgaatttaacatggttgtaggtagtagtttt-agaatttggggat 114  Q
    |||||||||||||||||| |||||||||||  ||||| | | | | ||||||  ||| |||||||||| ||||||||  ||||||| || ||||||| ||    
T  32302278 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaaattgtatttaacatg-ttgtaggtt-tagttttgaggatttgggaat 32302181  T
Q  115 tagggttaaaagtgataaattgatgatcagatgatggaaa 154  Q
    |||||||||||||||| ||||| |||| | ||||| ||||    
T  32302180 tagggttaaaagtgatgaattgttgattatatgattgaaa 32302141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 4071732 - 4071661
Alignment:
Q  156 ctgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    ||||||||| ||||||||||  |||| |||||||||| | || ||||| |  ||||||||||||||||||||    
T  4071732 ctgttgaattgatgtagaaatagtgtccagaccttagattattcatagaacaatgattggaatcaattttaa 4071661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 14317516 - 14317590
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||    
T  14317516 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt 14317590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 9032614 - 9032723
Alignment:
Q  118 ggttaaaagtgataaattgatga-tcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgga 216  Q
    ||||||||||||| |||||| || | ||||||| ||||  ||| |||| |||||||||| ||| | || ||||||| ||||||||||| ||||| || ||    
T  9032614 ggttaaaagtgatcaattgaggaattagatgatagaaacttgtagaattgatgtagaaagtgtatacataccttagataatccatagg-tgatgtttaga 9032712  T
Q  217 atcaattttaa 227  Q
    |||| ||||||    
T  9032713 atcagttttaa 9032723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 16214539 - 16214461
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacat 82  Q
    |||||||||| | |||||||||||||||| |||  |||||||||||| ||| | ||| |||| |||||| |||||||||    
T  16214539 cgatcgattaacctaaggtaagggtgggattaatattcaataatcttgagtctatgattctgaaaattgtatttaacat 16214461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 18455578 - 18455656
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatg 83  Q
    |||||||| || ||||||||||||||||||||| ||||||  ||||||| || ||| ||||| ||||  ||||||||||    
T  18455578 gatcgattttcttaaggtaagggtgggactaacattcaatcttcttaagcatatgattctgataattagatttaacatg 18455656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 38519638 - 38519577
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaa 175  Q
    ||||||||||| |||||| |||||||||| ||||||||  |||||| ||||| ||||||||||    
T  38519638 attagggttaagagtgat-aattgatgattagatgatgagaaactgctgaattgatgtagaaa 38519577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 15081169 - 15081275
Alignment:
Q  25 agggtgggactaaccttcaataatcttaagtatgtgactc-tgaaattgaatttaacatggttgtaggtagtagtttt--agaatttggggattagggtt 121  Q
    |||||||||||||| |||||||||||| ||| | ||| || | |||||| ||||||||| |||||||||  |||||||  |||||||| | |||||||||    
T  15081169 agggtgggactaacattcaataatcttgagtctatgattcttaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaattagggtt 15081266  T
Q  122 aaaagtgat 130  Q
    || ||||||    
T  15081267 aagagtgat 15081275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 15119295 - 15119348
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    ||||||||| | |||||||||||| ||||||||||||  ||||| |||||||||    
T  15119295 gatcgattaacctaaggtaagggtaggactaaccttctttaatcataagtatgt 15119348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 227
Target Start/End: Complemental strand, 16574216 - 16574088
Alignment:
Q  98 ttttagaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaat 197  Q
    |||||||||||||  |||||||||||||||   | ||||||||| | || |||||||  |||||||| |||| | ||||||||| || |||||||   ||    
T  16574216 ttttagaatttgga-attagggttaaaagttgcagattgatgattaaataatggaaacatgttgaattgatgcaaaaactgtgtacaaaccttagaagat 16574118  T
Q  198 ccataggatgatgattggaatcaattttaa 227  Q
     |||||| ||||| || |||||| ||||||    
T  16574117 tcataggttgatgtttagaatcagttttaa 16574088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 227
Target Start/End: Original strand, 16591446 - 16591574
Alignment:
Q  98 ttttagaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaat 197  Q
    |||||||||||||  |||||||||||||||   | ||||||||| | || |||||||  |||||||| |||| | ||||||||| || |||||||   ||    
T  16591446 ttttagaatttgga-attagggttaaaagttgcagattgatgattaaataatggaaacatgttgaattgatgcaaaaactgtgtacaaaccttagaagat 16591544  T
Q  198 ccataggatgatgattggaatcaattttaa 227  Q
     |||||| ||||| || |||||| ||||||    
T  16591545 tcataggttgatgtttagaatcagttttaa 16591574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 10658840 - 10658916
Alignment:
Q  7 atcgattatcgtaaggtaagggtgggactaaccttcaataatcttaag-tatgtgactctgaaattgaatttaacat 82  Q
    |||||||| | |||||||||||||||||||||||||  ||||  |||| | | ||| |||||||||| |||||||||    
T  10658840 atcgattaacctaaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacat 10658916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 20488387 - 20488351
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagt 55  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  20488387 aaggtaagggtgagactaacattcaataatcttaagt 20488351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 37793380 - 37793428
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaag 54  Q
    |||||||| || ||||||||||||||||||||| ||||||  |||||||    
T  37793380 gatcgattttcttaaggtaagggtgggactaacattcaatcttcttaag 37793428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 4e-72; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 19739806 - 19739581
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt 101  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||||  | ||||||||| | ||||  ||||||||||| |||||||||| ||||||||    
T  19739806 tgccaatcgattatcctaaggtaagggtgagactaaccttcaataattctgagtatgtgattatgaatatgaatttaacacggttgtaggttgtagtttt 19739707  T
Q  102 agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccat 201  Q
    |||||||||| |||||||||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||||||||| ||||||||||||||||||     
T  19739706 agaatttgggaattagggttaaaagtgatgaattgatgattagatgttggaaaattgttgaattgatgtagaaactgtgtacagaccttaggtaatccac 19739607  T
Q  202 aggatgatgattggaatcaattttaa 227  Q
    |||||||| |||||||||| ||||||    
T  19739606 aggatgataattggaatcagttttaa 19739581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 27996859 - 27996634
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt 101  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||||||||||||||||||| | ||||||||    
T  27996859 tgccaatcgattatcctaaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaaatgaatttaacatggttgtagattgtagtttt 27996760  T
Q  102 agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccat 201  Q
    |||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||| |||  ||||||||| ||||| |||||||||| ||||||||    
T  27996759 agaatttgggaattagggttaaaagtgatgaattgatgattagatgatggaaaactgttaaattaatgtagaaattgtgtacagaccttagataatccat 27996660  T
Q  202 aggatgatgattggaatcaattttaa 227  Q
    | || ||| |||||||||| ||||||    
T  27996659 atgaggataattggaatcagttttaa 27996634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 13591069 - 13591270
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggattag 117  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||||| || |  ||||||||||||| | |||||    
T  13591069 taaggtaagggtgggactaaccttaaataatcttgagtatgtgaatctgatattgaatttaacatggttgtatgttgaggttttagaatttgagaattag 13591168  T
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||  |||||||||| ||||||| |||||||||||| | |||| ||||||||||| || ||||||  ||||||||||||||||||||||||    
T  13591169 ggttaaaagtgaggaattgatgattagatgatagaaaactgttgagttgatggagaaactgtgtacataccttatataatccataggatgatgattggaa 13591268  T
Q  218 tc 219  Q
    ||    
T  13591269 tc 13591270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 26014336 - 26014153
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggattag 117  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||| |   |||||| ||||| | |||||    
T  26014336 taaggtaagggtgggactaaccttcaataatcttgagtatgtgattttgaaattgaatttaacatggttgtaggttgagtttttaggatttgagaattag 26014237  T
Q  118 ggttaaaagtgataaattgatgatcagatgat--ggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatcc 199  Q
    ||||||||||||  ||||||||||  ||||||   |||||||||||||| ||||| |||||||||| |||||||||| ||||||    
T  26014236 ggttaaaagtgaagaattgatgattggatgatagagaaaactgttgaattgatgttgaaactgtgtacagaccttagataatcc 26014153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 16044023 - 16043801
Alignment:
Q  4 ccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttta 102  Q
    |||||||||| || ||||||||||||| ||||||| | || ||||||||||| | ||  ||||||| ||| |||||||||| || |||| | |||||||     
T  16044023 ccgatcgattttc-taaggtaagggtgagactaacatgcagtaatcttaagtctatggttctgaaaattgtatttaacatg-ttatagg-attagttttt 16043927  T
Q  103 ga--atttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatcca 200  Q
    ||  ||||| | ||||||||||| |||||||| |||||||| |  ||||| ||||||||||||| |||||||||| ||||| |||||||||| |||||||    
T  16043926 gaggatttgagaattagggttaagagtgataa-ttgatgattaattgatgaaaaactgttgaattgatgtagaaaatgtgtacagaccttagataatcca 16043828  T
Q  201 taggatgatgattggaatcaattttaa 227  Q
    ||||||||| || ||||||||||||||    
T  16043827 taggatgattataggaatcaattttaa 16043801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 220
Target Start/End: Complemental strand, 50161089 - 50160935
Alignment:
Q  67 aaattgaatttaacatggttgtaggtagtagttttagaatttggggattagggttaaaagtgataaattgatgatcagatgatgga-aaactgttgaatg 165  Q
    ||||||||||| |||||||||||||| |   |||||||||||| | |||||||||||||||||  | |||||||| |||||| | | ||| ||||||||     
T  50161089 aaattgaattttacatggttgtaggttgagtttttagaatttgagaattagggttaaaagtgaggatttgatgattagatgaggaataaattgttgaatt 50160990  T
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatca 220  Q
    |||||||||||| ||| |||||||||| |||| |||||||||||| || ||||||    
T  50160989 gatgtagaaactatgtacagaccttagataattcataggatgatgtttagaatca 50160935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 227
Target Start/End: Complemental strand, 14651591 - 14651467
Alignment:
Q  102 agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccat 201  Q
    |||||||||| |||||| ||||||||||| |||||| ||| | ||||||||||  ||| |||| |||||||||||||||| |||||||||| ||||||||    
T  14651591 agaatttgggaattagg-ttaaaagtgatcaattgaggattaaatgatggaaacttgtagaattgatgtagaaactgtgtacagaccttagataatccat 14651493  T
Q  202 aggatgatgattggaatcaattttaa 227  Q
    ||| |||| |||||||||| ||||||    
T  14651492 agggtgataattggaatcagttttaa 14651467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 40907925 - 40907801
Alignment:
Q  102 agaatttggggattagggttaaaa-gtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatcca 200  Q
    |||||||| | ||||||||||||| |||||||||||||||| ||||||||||||  ||||||||  |||||||||||| ||  ||||||||| |||| ||    
T  40907925 agaatttgagaattagggttaaaaagtgataaattgatgattagatgatggaaacgtgttgaattaatgtagaaactgagtatagaccttagataatgca 40907826  T
Q  201 taggatgatgattggaatcaatttt 225  Q
    ||||||||||||| |||||| ||||    
T  40907825 taggatgatgattagaatcagtttt 40907801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 10057713 - 10057622
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||  |||||||||||||||||||||| |  |||||||||||||    
T  10057713 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaatttg 10057622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 12841628 - 12841408
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt-ag 103  Q
    |||||||| || ||||||||||||||||||||| ||||||  |||||||    ||| ||||| ||||  |||||||||| ||| ||||  ||||||| ||    
T  12841628 gatcgattttcttaaggtaagggtgggactaacattcaatcttcttaagcccatgattctgataattagatttaacatg-ttggaggtt-tagttttgag 12841531  T
Q  104 aatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatag 203  Q
    |||| | | |||||| ||||||||||  |||||||||| |||||||| |||| |||| ||| |||||||||| ||| | ||||| |||| ||||||||||    
T  12841530 aattggagaattagg-ttaaaagtgaggaattgatgattagatgatgaaaaagtgttaaattgatgtagaaagtgtttacagacattagataatccatag 12841432  T
Q  204 gatgatgattggaatcaattttaa 227  Q
    | ||||| || |||||||||||||    
T  12841431 ggtgatgtttagaatcaattttaa 12841408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 15117566 - 15117691
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  15117566 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 15117664  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  15117665 tagggttaaaagtgattatttgatgat 15117691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 3485913 - 3485792
Alignment:
Q  22 gtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggattagg 118  Q
    ||||||||| ||||||| |||||||||||||||| | ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||| | ||||||    
T  3485913 gtaagggtgagactaacattcaataatcttaagtctatgattctgaaaattggatttaacatg-ttgtaggttttagtttttgagaatttgagaattagg 3485815  T
Q  119 gttaaaagtgataaattgatgat 141  Q
    |||||||||||| ||||||||||    
T  3485814 gttaaaagtgattaattgatgat 3485792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 12032985 - 12033110
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  12032985 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 12033083  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    || ||||||||||| | ||||||||||    
T  12033084 taaggttaaaagtggttaattgatgat 12033110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 15792746 - 15792538
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaa-attgaatttaacatggttgtaggtagtagttttaga-atttggggatt 115  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| |||||  |||  |||||||||| ||||||| | ||||||| || | ||||  |||    
T  15792746 taaggtaagggtgggactaacattcaattttcttaagcctatgattctgatgattagatttaacatg-ttgtagg-attagtttttgagaattggaaatt 15792649  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgg 215  Q
    |||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| ||||| |||||||||| ||||||||||| ||||| || |    
T  15792648 agggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatccatagggtgatgtttag 15792550  T
Q  216 aatcaattttaa 227  Q
    || || ||||||    
T  15792549 aaccagttttaa 15792538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 18238826 - 18238951
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||||||   ||| ||| ||||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  18238826 taaggtaagggtgagactaacattcaataatcttaagtcattgattctggaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 18238924  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  18238925 tagggttaaaagtgattatttgatgat 18238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 19243651 - 19243526
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  19243651 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgagaat 19243553  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  19243552 tagggttaaaagtgattatttgatgat 19243526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 44616239 - 44616114
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||  || | ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||||| ||    
T  44616239 taaggtaagggtgagactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatg-ttgtaggttttagtttttgagaatttgggaat 44616141  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  44616140 tagggttaaaagtgattaattgatgat 44616114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 25031214 - 25031088
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg--aaattgaatttaacatggttgtaggtagtagtttt--agaatttgggga 113  Q
    ||||||||||||||||||||| ||||||||||||||||    || ||||  |||||| ||||||||| |||||||||  |||||||  |||||||| | |    
T  25031214 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaaattggatttaacat-gttgtaggttttagtttttgagaatttgagaa 25031116  T
Q  114 ttagggttaaaagtgataaattgatgat 141  Q
    ||||||||||||||||| ||||||||||    
T  25031115 ttagggttaaaagtgattaattgatgat 25031088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 1836734 - 1836857
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | | | |||| |||||| ||||||||  |||||||||| |||||||  |||||||||| ||    
T  1836734 taaggtaagggtgggactaacattcaataatcttgagtctatcattctgaaaattgtatttaaca--gttgtaggta-tagtttttgagaatttgggaat 1836830  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  1836831 tagggttaaaagtgattatttgatgat 1836857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 7640400 - 7640525
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  7640400 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggttttagtttttgagaatttgggaat 7640498  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    || ||||||||||||| | ||||||||    
T  7640499 taaggttaaaagtgattatttgatgat 7640525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 14873299 - 14873424
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||  ||||||||||||||||    || |||| |||||| ||||||||| |||||||||  || ||||  |||||||||| ||    
T  14873299 taaggtaagggtgggactaaaattcaataatcttaagtcatagattctgaaaattggatttaacat-gttgtaggttttaatttttgagaatttgggaat 14873397  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  14873398 tagggttaaaagtgattaattgatgat 14873424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 29268304 - 29268179
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  || ||||||| ||    
T  29268304 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagtatttgggaat 29268206  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    || ||||||||||| | ||||||||||    
T  29268205 taaggttaaaagtggttaattgatgat 29268179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 50221552 - 50221677
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  50221552 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgagaat 50221650  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  50221651 tagggttaaaagtggttaattgatgat 50221677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 26049715 - 26049828
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| ||||| |||||||||| ||||||||||| ||||| |    
T  26049715 attagggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatccatagggtgatgtt 26049813  T
Q  213 tggaatcaattttaa 227  Q
    |  ||||| ||||||    
T  26049814 tataatcagttttaa 26049828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 44772297 - 44772422
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| |||| |||| |||||||||  |||||||  |||||||| | ||    
T  44772297 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggattttacat-gttgtaggttttagtttttcagaatttgagaat 44772395  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    ||| |||||||||||| | ||||||||    
T  44772396 tagagttaaaagtgattatttgatgat 44772422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 363215 - 363102
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  363215 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 363118  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  363117 tagggttaagagtgat 363102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 18023060 - 18022937
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatta 116  Q
    |||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||| || || |||||| ||  ||||||| |||||||||| ||||    
T  18023060 aaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggattgaatat-gttgtaagttttagttttgagaatttgggaatta 18022962  T
Q  117 gggttaaaagtgataaattgatgat 141  Q
    ||||||||| |||| | ||||||||    
T  18022961 gggttaaaattgattatttgatgat 18022937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 14852119 - 14852232
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    |||||| |||| |||||||| |||| ||| ||||||||||||  ||| |||| ||||||||||  |||| |||||||||| |||||||| || ||||| |    
T  14852119 attaggattaagagtgataa-ttgaggattagatgatggaaatttgtagaattgatgtagaaagcgtgtacagaccttagataatccatggggtgatgtt 14852217  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  14852218 tagaatcagttttaa 14852232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 14970027 - 14970140
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| ||||| |||| |||||| ||||||||| ||| |||||  |||||||  |||||||| | ||    
T  14970027 taaggtaagggtgagactaacattcaataatcttgagtctgtgattctgaaaattgtatttaacat-gttataggt-ttagtttttgagaatttgagaat 14970124  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  14970125 tagggttaagagtgat 14970140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 15489469 - 15489582
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    |||||||||||||||| |||| |||||||||||| ||| | | | |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  15489469 taaggtaagggtgggaataacattcaataatcttgagtctataattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 15489566  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||||||||||    
T  15489567 tagggttaaaagtgat 15489582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 18214524 - 18214637
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||| ||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  18214524 taaggtaagcgtgggactaacattcaataatcttgagtctatgattctgcaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 18214621  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  18214622 tagggttaagagtgat 18214637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 52872402 - 52872515
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    |||||||||||||||| |||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  52872402 taaggtaagggtgggattaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 52872499  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  52872500 tagggttaagagtgat 52872515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 14717934 - 14718008
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||    
T  14717934 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggt 14718008  T

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Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 17334139 - 17334044
Alignment:
Q  132 aattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    |||||||| | |||||||| | || ||| |||| |||||||||| ||| |  ||||||||| ||||||||||| ||||| || |||||||||||||    
T  17334139 aattgatggttagatgatgtagaattgtagaattgatgtagaaagtgtttatagaccttagataatccatagggtgatgtttagaatcaattttaa 17334044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 19617395 - 19617469
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||    
T  19617395 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt 19617469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 227
Target Start/End: Original strand, 32306140 - 32306360
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaa-attgaatttaacatggttgtaggtagtagttttaga 104  Q
    |||||||| || ||||||||||||||||||||| ||||||  |||||||  | ||| | |||  |||  |||||||||| |||||||   ||||||| ||    
T  32306140 gatcgattttcttaaggtaagggtgggactaacattcaatcttcttaagcctatgattttgatgattagatttaacatg-ttgtagggt-tagtttttga 32306237  T
Q  105 -atttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatag 203  Q
     | ||||  ||||||||||| |||||||| |||| ||| | | |||| |||  ||| |||| |||||||||| ||||| || ||||||| ||||||||||    
T  32306238 gaattggaaattagggttaagagtgataa-ttgaggattaaacgatgaaaacttgtagaattgatgtagaaagtgtgtacaaaccttagataatccatag 32306336  T
Q  204 gatgatgattggaatcaattttaa 227  Q
    | ||||| || |||||| ||||||    
T  32306337 gctgatgtttagaatcagttttaa 32306360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 46643640 - 46643597
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  46643640 gatgtagaaactgtttacagaccttaggtaatccataggatgat 46643597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 12778196 - 12778310
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg--aaattgaatttaacatggttgtaggtagtagtttt--agaatttgggga 113  Q
    ||||| ||||||||||||||| |||||||||||| ||| | ||| ||||  |||||| ||||||||| |||||||||  |||||||  |||||||| | |    
T  12778196 taaggcaagggtgggactaacattcaataatcttgagtctatgattctgaaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaa 12778293  T
Q  114 ttagggttaaaagtgat 130  Q
    |||||||||| ||||||    
T  12778294 ttagggttaagagtgat 12778310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 52313595 - 52313545
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa 69  Q
    |||||||||||||||||||| |||||||||||||||| | ||| |||||||    
T  52313595 aaggtaagggtgggactaacattcaataatcttaagtctatgattctgaaa 52313545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 19858455 - 19858380
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg--aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| ||||  |||||| ||||||||| |||||||||    
T  19858455 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaaattgtatttaacat-gttgtaggt 19858380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 22354720 - 22354655
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatg 83  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| |||||||||| ||||||||||    
T  22354720 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaaattggatttaacatg 22354655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 3515849 - 3515736
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  | |||||| | ||    
T  3515849 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgataatttgagaat 3515752  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  3515751 tagggttaagagtgat 3515736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 14745700 - 14745752
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaat 70  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| ||||||||    
T  14745700 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaat 14745752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 15011521 - 15011607
Alignment:
Q  67 aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaa 154  Q
    |||||| |||||||||| ||||||||  ||||||| || ||||||| |||||||||||||||||||||||| |||| | ||||| ||||    
T  15011521 aaattgtatttaacatg-ttgtaggtt-tagttttgaggatttgggaattagggttaaaagtgataaattgttgattatatgattgaaa 15011607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 53081397 - 53081492
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||| |||| ||||||||||| |  ||||| | || ||||  || |||||||||||||||| || ||||||| ||||| ||||||||||    
T  53081397 attagggttaaa-gtgagaaattgatgattaattgatgtagaattgttagattgatgtagaaactgtgtacataccttagataatctataggatgat 53081492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 11773 - 11881
Alignment:
Q  23 taagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggattaggg 119  Q
    |||||||||||||||| |||||||||||| ||| | ||| |||| |||||| |||||| || |||||||||  |||||||  |||||||| | |||||||    
T  11773 taagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatat-gttgtaggt-ttagtttttgagaatttgagaattaggg 11870  T
Q  120 ttaaaagtgat 130  Q
    |||| ||||||    
T  11871 ttaagagtgat 11881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 26921509 - 26921560
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa 69  Q
    |||||||||||| ||||||||||||| ||||| ||||||||| | |||||||    
T  26921509 taaggtaagggtaggactaaccttcattaatcataagtatgtaattctgaaa 26921560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 51993624 - 51993530
Alignment:
Q  7 atcgattatcgtaaggtaagggtgggactaaccttcaataatcttaag-tatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt 101  Q
    |||||||| | |||||||||||||||||||||||||  ||||  |||| | ||| | |||||||||| ||||||||| ||||||||  ||||||||    
T  51993624 atcgattaacctaaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacat-gttgtaggatgtagtttt 51993530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 21189057 - 21189170
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| ||||| || |||| | | ||||||||||||  |||||||| | |||||||||||||| ||| ||||||   || |||||| ||||| |    
T  21189057 attagggttaagagtgagaa-ttgagggttagatgatggaaacatgttgaattggtgtagaaactgtgtacaggccttagaagattcataggttgatgtt 21189155  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  21189156 tagaatcagttttaa 21189170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 26790209 - 26790099
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaac-tgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgga 216  Q
    ||||||||||||  |||||| | | |||||||||||||| |||  ||| |||||||||| ||| | |||||||||| |||| |||||| ||||| ||  |    
T  26790209 ggttaaaagtgagcaattgagggttagatgatggaaaacttgtataattgatgtagaaagtgtatacagaccttagataattcatagggtgatgtttaaa 26790110  T
Q  217 atcaattttaa 227  Q
    |||| ||||||    
T  26790109 atcagttttaa 26790099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 15100099 - 15100038
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    |||||||||||||| | |||||||||| ||||||||||| |||| |  ||||||| ||||||    
T  15100099 gatgtagaaactgtttacagaccttagataatccatagggtgattacaggaatcagttttaa 15100038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 8711536 - 8711375
Alignment:
Q  63 tctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttga 162  Q
    ||||||||||| ||||||||||  |||||| | ||||| |||||||||  |||||||||||||||  ||||||| |||| |||| ||  |||  ||||||    
T  8711536 tctgaaattga-tttaacatgggagtaggttgaagttt-agaatttgga-attagggttaaaagttgtaaattggtgattagataatataaacatgttga 8711440  T
Q  163 atggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    || | || | ||||||||| || | ||||| | || ||||| |||||| || |||||| ||||||    
T  8711439 attggtgcaaaaactgtgtacaaatcttagatgattcatagaatgatgtttagaatcagttttaa 8711375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 3 - 227
Target Start/End: Original strand, 10747 - 10971
Alignment:
Q  3 gccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttta 102  Q
    |||||||||||||| |||||||||||||||||||||||||||||||  | ||||||||| |||||||||||||||||||||||||||||| | |||||||    
T  10747 gccgatcgattatcctaaggtaagggtgggactaaccttcaataattatgagtatgtgattctgaaattgaatttaacatggttgtaggttgaagtttta 10846  T
Q  103 gaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccata 202  Q
     |||||||| |||||||||||||||  |||||||||||| |||||||||||| ||||||||| |||||||||| ||||| |||||||||| |||| | ||    
T  10847 taatttgggaattagggttaaaagttgtaaattgatgattagatgatggaaacctgttgaattgatgtagaaattgtgtacagaccttagataattccta 10946  T
Q  203 ggatgatgattggaatcaattttaa 227  Q
    ||||| ||||| |||||| ||||||    
T  10947 ggatggtgattagaatcagttttaa 10971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 18 - 228
Target Start/End: Original strand, 2471 - 2682
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggt--agtagttttagaatttggggatt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||  |||||||||||| | |||    
T  2471 taaggtaagggtgggactaaccttcaataatcttgagtatgtgaatctgaaattgaatttaacatggttgtaggttaagtt-ttttagaatttgagaatt 2569  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgg 215  Q
    ||||||||||||||  |||||||||| ||||||| |||||||||||||| |||||||||||||||| ||||| || | ||||| |||||||||| |||||    
T  2570 agggttaaaagtgacgaattgatgattagatgatagaaaactgttgaattgatgtagaaactgtgtacagacttttgataatctataggatgataattgg 2669  T
Q  216 aatcaattttaaa 228  Q
    |||||||||||||    
T  2670 aatcaattttaaa 2682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 4e-60; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 37516659 - 37516450
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggattag 117  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| | | |||||||| |   |||||||||||| | |||||    
T  37516659 taaggtaagggtgggactaaccttcaataatcttgagtatgtgattctgaaattgaatttaaaacgattgtaggttgagtttttagaatttgagaattag 37516560  T
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||  |||||||||| ||||||| ||||| |||||||| |||||||||| ||||| |||||||||| |||||||||||||||| |||| ||    
T  37516559 ggttaaaagtgaggaattgatgattagatgatagaaaattgttgaattgatgtagaaattgtgtacagaccttagataatccataggatgataattgaaa 37516460  T
Q  218 tcaattttaa 227  Q
    ||| ||||||    
T  37516459 tcagttttaa 37516450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 13660837 - 13661039
Alignment:
Q  1 ttgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtt 99  Q
    |||||||| | | ||| |||||||||||||||||||||||||||||||  | ||||||||| ||||||| ||||||||||||||||||||||| | ||||    
T  13660837 ttgccgattgttaatcataaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaaattgaatttaacatggttgtaggttgaagtt 13660936  T
Q  100 ttagaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatcc 199  Q
    |||||||||| | ||||||||| |||||||| |||||||||| |||||||||||||||||| | | ||||||||||||| || |||||||||| |||| |    
T  13660937 ttagaatttgagaattagggttcaaagtgatgaattgatgattagatgatggaaaactgttaatttgatgtagaaactgagtacagaccttagataattc 13661036  T
Q  200 ata 202  Q
    |||    
T  13661037 ata 13661039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 13719480 - 13719682
Alignment:
Q  1 ttgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtt 99  Q
    |||||||| | | ||| |||||||||||||||||||||||||||||||  | ||||||||| ||||||| ||||||||||||||||||||||| | ||||    
T  13719480 ttgccgattgttaatcataaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaaattgaatttaacatggttgtaggttgaagtt 13719579  T
Q  100 ttagaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatcc 199  Q
    |||||||||| | ||||||||| |||||||| |||||||||| |||||||||||||||||| | | ||||||||||||| || |||||||||| |||| |    
T  13719580 ttagaatttgagaattagggttcaaagtgatgaattgatgattagatgatggaaaactgttaatttgatgtagaaactgagtacagaccttagataattc 13719679  T
Q  200 ata 202  Q
    |||    
T  13719680 ata 13719682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 19928753 - 19928967
Alignment:
Q  13 tatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttg 109  Q
    |||| ||||||||||||| ||||||| |||| ||||||||||  | ||| ||||||| ||| |||||||||| || |||||  |||||||  ||||| |     
T  19928753 tatcctaaggtaagggtgagactaacattcattaatcttaagcctttgattctgaaaattgcatttaacatg-ttataggtt-tagttttttagaatgta 19928850  T
Q  110 gggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    || |||||| |||||||||||| ||||||||| |||||||| |||  |||||||| |||||||||||||||| |||||||||| |||||||||| |||||    
T  19928851 ggaattagg-ttaaaagtgatagattgatgattagatgatgaaaacttgttgaattgatgtagaaactgtgtacagaccttagataatccatagaatgat 19928949  T
Q  210 gattggaatcaattttaa 227  Q
     |||||||||| ||||||    
T  19928950 aattggaatcagttttaa 19928967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 21999438 - 21999647
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggattag 117  Q
    ||||||||||||||||||| | |||| | ||||||||| | | | |||||||||| ||||||||||   || | |  |  ||| |||||||| | |||||    
T  21999438 taaggtaagggtgggactatcattcagtgatcttaagtctataattctgaaattggatttaacatgtaagttgttcttgatttgagaatttgagaattag 21999537  T
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||||| ||| |||| ||||| || |||  ||||||||  ||||||||||||||| |||||||||| |||| ||||||||||||||| |||    
T  21999538 ggttaaaagtgataatttggtgattagatggtgaaaacgtgttgaattaatgtagaaactgtgtacagaccttagataatgcataggatgatgatttgaa 21999637  T
Q  218 tcaattttaa 227  Q
    ||| ||||||    
T  21999638 tcagttttaa 21999647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 225
Target Start/End: Original strand, 22385062 - 22385282
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagttt 100  Q
    |||||||||||| || |||||||| |||||||||||| ||||||  |||||||  | ||| ||||| ||||  |||||||||| ||||||||  ||||||    
T  22385062 tgccgatcgattttc-taaggtaatggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatg-ttgtaggtt-tagttt 22385158  T
Q  101 t-agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatcc 199  Q
    | ||||||||   ||||||||||| |||||||| |||||||| |||||||| ||||||||||||| |||||||||| ||||| |||||||||  ||||||    
T  22385159 tgagaatttgaa-attagggttaagagtgataa-ttgatgattagatgatgaaaaactgttgaattgatgtagaaagtgtgtacagaccttatataatcc 22385256  T
Q  200 ataggatgatgattggaatcaatttt 225  Q
    ||||| ||||| || |||||| ||||    
T  22385257 atagggtgatgtttagaatcagtttt 22385282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 227
Target Start/End: Original strand, 22252303 - 22252523
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt-- 101  Q
    ||||||||| || ||||||||||||||||||||| ||||||  |||||||  | ||| ||||| ||||  |||||||||| ||||||||  |||||||      
T  22252303 cgatcgattttc-taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatg-ttgtaggtt-tagtttttg 22252399  T
Q  102 agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccat 201  Q
    ||||||||   ||||||||||| |||||||| |||||||| ||||||||  |||||| ||||| |||||||||| ||||| |||| ||||| ||||||||    
T  22252400 agaatttgaa-attagggttaagagtgataa-ttgatgattagatgatgagaaactgctgaattgatgtagaaagtgtgtacagaacttagataatccat 22252497  T
Q  202 aggatgatgattggaatcaattttaa 227  Q
    ||| ||||| || |||||| ||||||    
T  22252498 agggtgatgtttagaatcagttttaa 22252523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 21979551 - 21979676
Alignment:
Q  102 agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccat 201  Q
    |||||||| | |||||||||||||||||||| ||| |||| ||||| || |||  ||||||||  ||||||||||||||| || ||||||| |||| |||    
T  21979551 agaatttgagaattagggttaaaagtgataatttggtgattagatgttgaaaacgtgttgaattaatgtagaaactgtgtacataccttagataatgcat 21979650  T
Q  202 aggatgatgattggaatcaattttaa 227  Q
    |||||||||||| |||||| ||||||    
T  21979651 aggatgatgatttgaatcagttttaa 21979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 1485350 - 1485225
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  1485350 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 1485252  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  1485251 tagggttaaaagtgattatttgatgat 1485225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 4484228 - 4484103
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  4484228 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 4484130  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  4484129 tagggttaaaagtgatcatttgatgat 4484103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 14408658 - 14408783
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  14408658 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 14408756  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  14408757 tagggttaaaagtgattatttgatgat 14408783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 14824724 - 14824599
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  14824724 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 14824626  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  14824625 tagggttaaaagtgattatttgatgat 14824599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 19807394 - 19807485
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||  |||||||||||||| ||||||| | ||||||||||||||    
T  19807394 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaagatgaatttaacatggatgtaggttgaagttttagaatttg 19807485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 45289761 - 45289886
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||||||| | ||| |||  |||||| ||||||||| ||||||||   |||||||  |||||||||| ||    
T  45289761 taaggtaagggtgggactaacattcaataatcttaagtctatgattctaaaaattggatttaacat-gttgtagggtttagtttttgagaatttgggaat 45289859  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  45289860 tagggttaaaagtgattaattgatgat 45289886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 18677276 - 18677401
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||||| ||    
T  18677276 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgggaat 18677374  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  18677375 tagggttaaaagtgattatttgatgat 18677401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 20045409 - 20045534
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  | |||||||| ||    
T  20045409 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgaaaatttgggaat 20045507  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  20045508 tagggttaaaagtgattatttgatgat 20045534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 227
Target Start/End: Original strand, 21966700 - 21966902
Alignment:
Q  17 gtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggatta 116  Q
    |||||||||||||||||||| | |||| | ||||||||| | | | |||||||||| ||||||||||    ||   ||| ||| | || |||| | ||||    
T  21966700 gtaaggtaagggtgggactatcattcagtgatcttaagtctataattctgaaattggatttaacatg----ta---agttgttcttga-tttgagaatta 21966791  T
Q  117 gggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgga 216  Q
    |||||||||||||| | ||| |||| |||||||| |||  ||||||||  ||||| ||| ||||| |||||||||| |||| ||||||||||||||| ||    
T  21966792 gggttaaaagtgatgatttggtgattagatgatgaaaacgtgttgaattaatgtaaaaattgtgtacagaccttagataatgcataggatgatgatttga 21966891  T
Q  217 atcaattttaa 227  Q
    ||||| |||||    
T  21966892 atcaaatttaa 21966902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 24485254 - 24485379
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| || ||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  ||||||| || ||    
T  24485254 taaggtaagggtgggactaacatttaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggttttagtttttgagaatttaggaat 24485352  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  24485353 tagggttaaaagtgattaattgatgat 24485379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 44474780 - 44474903
Alignment:
Q  104 aatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatag 203  Q
    |||||||| |||||||| ||| ||||||||||| |||| ||||| || |||  ||||||||  ||||||||||||| | |||| ||||| |||| |||||    
T  44474780 aatttgggaattagggtaaaaggtgataaattggtgattagatggtgaaaatgtgttgaattaatgtagaaactgtatacagatcttagataatgcatag 44474879  T
Q  204 gatgatgattggaatcaattttaa 227  Q
    |||||||||| |||||| ||||||    
T  44474880 gatgatgattagaatcagttttaa 44474903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 228
Target Start/End: Complemental strand, 16800312 - 16800202
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||| |||||| ||| |||||||| |||  ||| |||| |||||||||| ||| | |||||||||| ||||||||||| ||||| || |||    
T  16800312 ggttaaaagtgatcaattgaggattagatgatgaaaacttgtagaattgatgtagaaagtgtttacagaccttagataatccatagggtgatgtttagaa 16800213  T
Q  218 tcaattttaaa 228  Q
    |||||||||||    
T  16800212 tcaattttaaa 16800202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 22245222 - 22245445
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagttt 100  Q
    |||||||||||| || ||||||||||||||||||||| ||||||  |||||||  | ||| ||||| ||||  |||||||||| ||||||||  ||||||    
T  22245222 tgccgatcgattttc-taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatg-ttgtaggtt-tagttt 22245318  T
Q  101 t--agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatc 198  Q
    |  ||||||||   ||||||||||| |||| ||| |||||||| |||||||   |||||| ||||| ||||||| || ||||| |||| ||||| |||||    
T  22245319 ttgagaatttgaa-attagggttaagagtgttaa-ttgatgattagatgattagaaactgctgaattgatgtagcaagtgtgtacagaacttagataatc 22245416  T
Q  199 cataggatgatgattggaatcaattttaa 227  Q
    |||||| ||||| || |||||| ||||||    
T  22245417 cataggctgatgtttagaatcagttttaa 22245445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 107 - 227
Target Start/End: Original strand, 20501319 - 20501438
Alignment:
Q  107 ttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggat 206  Q
    |||| ||||| |||||| |||||||| |||| ||| ||||||||||||  ||| ||||  ||||||||| |||||||||||||||| ||||||||||| |    
T  20501319 ttggagattaaggttaagagtgataa-ttgaggattagatgatggaaacttgtagaatttatgtagaaagtgtgtgcagaccttagataatccatagggt 20501417  T
Q  207 gatgattggaatcaattttaa 227  Q
    |||| || |||||| ||||||    
T  20501418 gatgtttagaatcagttttaa 20501438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 17085399 - 17085505
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||  ||||||||  ||||||||| ||||| |||||||||| ||||||||||| ||||| |    
T  17085399 attagggttaagagtgataa-ttgaggattagatgatggaaacttgttgaatttatgtagaaagtgtgttcagaccttagataatccatagggtgatgtt 17085497  T
Q  213 tggaatca 220  Q
    | ||||||    
T  17085498 tagaatca 17085505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 16412619 - 16412748
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagttt 100  Q
    ||||||||| | ||| ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  ||||||    
T  16412619 tgccgatcgttaatcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagttt 16412716  T
Q  101 t--agaatttggggattagggttaaaagtgat 130  Q
    |  |||||||| | ||||||||||| ||||||    
T  16412717 ttgagaatttgagaattagggttaagagtgat 16412748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 22984517 - 22984409
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||| |||||| ||| ||||||||||||  ||| |||  |||||||||| ||| | |||||||||| ||||||||||| ||||| || |||    
T  22984517 ggttaaaagtgatcaattgaggattagatgatggaaacttgtagaactgatgtagaaagtgtttacagaccttagataatccatagggtgatgtttagaa 22984418  T
Q  218 tcaatttta 226  Q
    ||| |||||    
T  22984417 tcagtttta 22984409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 2418085 - 2418191
Alignment:
Q  102 agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccat 201  Q
    |||||||| | ||||||||||| ||||| || |||||||| ||||| ||  |||||| ||||| |||||||||| ||||| |||||||||| |||| |||    
T  2418085 agaatttgagaattagggttaagagtgagaa-ttgatgattagatggtgagaaactgctgaattgatgtagaaagtgtgtacagaccttagataattcat 2418183  T
Q  202 aggatgat 209  Q
    ||||||||    
T  2418184 aggatgat 2418191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 5852507 - 5852631
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||| | ||||||||| |||||||||  |||||||  |||||||||| ||    
T  5852507 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaatcgtatttaacat-gttgtaggt-ttagtttttgagaatttgggaat 5852604  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||| ||||||| | ||||||||    
T  5852605 tagggttacaagtgattatttgatgat 5852631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 22002703 - 22002578
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||| | ||    
T  22002703 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgagaat 22002605  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  22002604 tagggttaaaagtggttaattgatgat 22002578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 104 - 227
Target Start/End: Complemental strand, 34951398 - 34951275
Alignment:
Q  104 aatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatag 203  Q
    |||||||| |||||||| ||| |||||||| |  |||| ||||| || |||  ||||||||  ||||||||||||| | |||| ||||| |||| |||||    
T  34951398 aatttgggaattagggtaaaaggtgataaaatagtgattagatggtgaaaatgtgttgaattaatgtagaaactgtatacagatcttagataatgcatag 34951299  T
Q  204 gatgatgattggaatcaattttaa 227  Q
    |||||||||| |||||| ||||||    
T  34951298 gatgatgattagaatcagttttaa 34951275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 21330876 - 21330677
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggattag 117  Q
    ||||||||||||||||||| | |||| | ||||||||| | ||| | |||||||| |||||||||| | |    ||||  ||  |||||||| | |||||    
T  21330876 taaggtaagggtgggactatcattcagtgatcttaagtctatgattttgaaattggatttaacatgttagggtttagtttttggagaatttgagaattag 21330777  T
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||| || | ||    ||||| ||||| || |||  ||||||||  ||||||||||||||| |||||||||| |||| ||||||||||||||| |||    
T  21330776 ggttaaaggttagaacc--atgattagatgttgaaaatgtgttgaattaatgtagaaactgtgtacagaccttagataatgcataggatgatgattagaa 21330679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 1326445 - 1326558
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  1326445 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 1326542  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  1326543 tagggttaagagtgat 1326558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 22996666 - 22996558
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||| |||||| ||| ||||||||||||  ||| | |  |||||||||| ||| | |||||||||| ||||||||||| ||||| || |||    
T  22996666 ggttaaaagtgatcaattgaggattagatgatggaaacttgtaggactgatgtagaaagtgtttacagaccttagataatccatagggtgatgtttagaa 22996567  T
Q  218 tcaatttta 226  Q
    ||| |||||    
T  22996566 tcagtttta 22996558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 32810536 - 32810423
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  32810536 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 32810439  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  32810438 tagggttaagagtgat 32810423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 4541584 - 4541709
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||  ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  | ||||||||  |    
T  4541584 taaggtaagggtgggactaatattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgataatttgggatt 4541682  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    ||||||||||||| || | ||||||||    
T  4541683 tagggttaaaagttattatttgatgat 4541709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 22237050 - 22237141
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    |||||||||||||||| ||| ||||||||||  | ||||||||| | ||||  |||||||||||||||||||||| |  |||| ||||||||    
T  22237050 taaggtaagggtgggagtaatcttcaataattctgagtatgtgattttgaagatgaatttaacatggttgtaggttgaggtttcagaatttg 22237141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 28398445 - 28398332
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| || || |||||||||| |||| |||||| ||||| |    
T  28398445 attagggttaagagtgataa-ttgaggattagatgatggaaatttgtagaattgatgtagaaagtgcgtacagaccttagataattcatagggtgatgtt 28398347  T
Q  213 tggaatcaattttaa 227  Q
    | ||| || ||||||    
T  28398346 tagaaccagttttaa 28398332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 42265510 - 42265619
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatta 116  Q
    ||||||||||||||||||||||| |||||   | ||||| ||| |||| |||||||||||||||  ||||||||| ||||||||  ||||||||| ||||    
T  42265510 aaggtaagggtgggactaacctttaataagtctgagtatatgattctgaaaattgaatttaaca-agttgtaggttgtagttttgggaatttgggaatta 42265608  T
Q  117 gggttaaaagt 127  Q
    |||||| ||||    
T  42265609 gggttagaagt 42265619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 22526362 - 22526253
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||| |||||| ||| |||||||| |||  ||| |||| |||||||||| ||| | || ||||||| ||||||||| | ||||| || |||    
T  22526362 ggttaaaagtgatcaattgaggattagatgatgaaaacttgtagaattgatgtagaaagtgtttacataccttagataatccatatggtgatgtttagaa 22526263  T
Q  218 tcaattttaa 227  Q
    ||| ||||||    
T  22526262 tcagttttaa 22526253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 19897356 - 19897243
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  19897356 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 19897259  T
Q  115 tagggttaaaagtgat 130  Q
    ||| ||||| ||||||    
T  19897258 tagagttaagagtgat 19897243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 20457520 - 20457407
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | |||  ||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  20457520 taaggtaagggtgggactaacattcaataatcttgagtctatgatcctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 20457423  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  20457422 tagggttaagagtgat 20457407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 22365503 - 22365399
Alignment:
Q  123 aaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaat 222  Q
    ||||||| |||||| |||| |  ||||| |||| ||||  || |||||||||||||| | |||||||||| ||||||||||| ||||  |||||||||||    
T  22365503 aaagtgagaaattggtgattaattgatgaaaaattgttagattgatgtagaaactgtttacagaccttagataatccataggttgatatttggaatcaat 22365404  T
Q  223 tttaa 227  Q
     ||||    
T  22365403 gttaa 22365399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 24049452 - 24049339
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||  ||||||||| |||||||||  |||||||  |||||||| | ||    
T  24049452 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattatatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 24049355  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  24049354 tagggttaagagtgat 24049339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 27471737 - 27471850
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| | || |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  27471737 taaggtaagggtgggactaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 27471834  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  27471835 tagggttaagagtgat 27471850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 32122570 - 32122457
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    |||||||||||||| |||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  32122570 taaggtaagggtggaactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 32122473  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  32122472 tagggttaagagtgat 32122457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 20404120 - 20404008
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| ||||| ||||| ||||||||| |||||||||  |||||||  |||||||  | |||    
T  20404120 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgataattgtatttaacat-gttgtaggt-ttagtttttgagaattttagaatt 20404023  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  20404022 agggttaagagtgat 20404008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 21983036 - 21983115
Alignment:
Q  102 agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgt 181  Q
    |||||||| | |||||||||||||||||||| ||| |||| ||||| || |||  ||||||||  |||||||||||||||    
T  21983036 agaatttgagaattagggttaaaagtgataatttggtgattagatggtgaaaacgtgttgaattaatgtagaaactgtgt 21983115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 22317911 - 22317993
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagttt 100  Q
    |||||||||||||||||||||||||| ||||  ||||| | ||| |||| ||||||||||||||| |||| ||||| |||||||    
T  22317911 taaggtaagggtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaaca-ggttctaggttgtagttt 22317993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 40492112 - 40492218
Alignment:
Q  102 agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccat 201  Q
    |||||||| | ||||||||||| |||||  |||||||||| ||||| || |||  ||| |||| |||||||||| ||| | |||||||||| ||||||||    
T  40492112 agaatttgagaattagggttaagagtga-gaattgatgattagatggtgaaaacttgtagaattgatgtagaaagtgtttacagaccttagataatccat 40492210  T
Q  202 aggatgat 209  Q
    | ||||||    
T  40492211 acgatgat 40492218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 20532628 - 20532741
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| ||||| || |||||| | |||||||| | || |||  ||| |||||||||| ||| | |||||||||| ||||||||||| ||||| |    
T  20532628 attagggttaagagtgagaa-ttgatggttagatgatgtagaattgtaaaattgatgtagaaagtgtttacagaccttagataatccatagggtgatgtt 20532726  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  20532727 tagaatcagttttaa 20532741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 23914931 - 23914807
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||||||||||| ||||| ||||||||||   ||| |||| |||||| |||||| || |||||| ||  |||||||  |||||||| | |||    
T  23914931 aaggtaagggtgggactaacattcaaaaatcttaagtcattgattctgaaaattggatttaatat-gttgtaagttttagtttttgagaatttgagaatt 23914833  T
Q  116 agggttaaaagtgataaattgatgat 141  Q
    |||||||||| |||| | ||||||||    
T  23914832 agggttaaaattgattatttgatgat 23914807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 3273942 - 3273859
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt 101  Q
    |||||||||||||||||||||||| ||||||  |  |||| ||| |||| ||||||||||||||| |||||| ||| ||||||||    
T  3273942 taaggtaagggtgggactaacctttaataattatgtgtatatgattctgaaaattgaatttaaca-ggttgtgggttgtagtttt 3273859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 11361359 - 11361246
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||  |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  11361359 taaggtaagggtgggactaacattcaataatcttgagtctatgattctaaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 11361262  T
Q  115 tagggttaaaagtgat 130  Q
    || |||||| ||||||    
T  11361261 taaggttaagagtgat 11361246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 15202306 - 15202419
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| |||||| || |||||||||  |||||||  |||||||| | ||    
T  15202306 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaatat-gttgtaggt-ttagtttttgagaatttgagaat 15202403  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  15202404 tagggttaagagtgat 15202419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 19154116 - 19154220
Alignment:
Q  123 aaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaat 222  Q
    ||||||| ||||||||||| |  ||||| |||| ||||  || ||||||||||||||||  |||||||||  |||||||||| ||||   ||||||||||    
T  19154116 aaagtgagaaattgatgattaattgatgaaaaattgttagattgatgtagaaactgtgtatagaccttagacaatccataggttgatatctggaatcaat 19154215  T
Q  223 tttaa 227  Q
     ||||    
T  19154216 gttaa 19154220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 22183996 - 22183888
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||| |||||| ||| | ||||||||||   || |||| |||||||||| ||| | || | ||||| ||||||||||| ||||| || |||    
T  22183996 ggttaaaagtgattaattgaggattaaatgatggaaattcgtagaattgatgtagaaagtgtatacatagcttagataatccatagggtgatgtttagaa 22183897  T
Q  218 tcaatttta 226  Q
    ||| |||||    
T  22183896 tcagtttta 22183888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 38549133 - 38549246
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    |||||||||||| |||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| ||||| |||  |||||||  |||||||| | ||    
T  38549133 taaggtaagggttggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtgggt-ttagtttttgagaatttgagaat 38549230  T
Q  115 tagggttaaaagtgat 130  Q
    |||| |||||||||||    
T  38549231 taggcttaaaagtgat 38549246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 17266238 - 17266332
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatga 208  Q
    |||||||||||| |||| |||||||||||    ||||| | || ||| |||| |||||||||| ||| | |||||||||| |||||||||||||||    
T  17266238 attagggttaaa-gtgagaaattgatgatttattgatgtagaattgtagaattgatgtagaaagtgtttacagaccttagataatccataggatga 17266332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 39834482 - 39834439
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||||| | |||||||||| ||||||||||||||||    
T  39834482 gatgtagaaactgtttacagaccttagataatccataggatgat 39834439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 22418679 - 22418792
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| | |||||| |||||||| ||||| ||  |||||  | ||| |||||||||| ||| | |||||||| | |||||||| || ||||| |    
T  22418679 attagggttaagattgataa-ttgatgattagatggtgagaaacttctaaattgatgtagaaagtgtttacagaccttggataatccatggggtgatgtt 22418777  T
Q  213 tggaatcaattttaa 227  Q
    | |||||||||||||    
T  22418778 tagaatcaattttaa 22418792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 17978416 - 17978457
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    |||||||||||||||||||| |||| |||||| |||||||||    
T  17978416 taaggtaagggtgggactaaacttctataatcataagtatgt 17978457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 22474808 - 22474767
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  22474808 taaggtaagggtgggactaaccttctttaatcataagtatgt 22474767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 25733821 - 25733854
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatctta 52  Q
    |||||||||||||||||||| |||||||||||||    
T  25733821 aaggtaagggtgggactaacattcaataatctta 25733854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 37609722 - 37609828
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||  |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  37609722 taaggtaagggtgagactaacattcaataatcttgagtctatgattctaaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 37609819  T
Q  115 tagggttaa 123  Q
    |||||||||    
T  37609820 tagggttaa 37609828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 11250872 - 11250984
Alignment:
Q  114 ttagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgatt 213  Q
    ||||||| ||| ||||||| ||| |||| ||||| || |||  ||||||||  | |||| || ||||| |||| ||||| |||| |||||||||||||||    
T  11250872 ttagggtaaaaggtgataatttggtgattagatggtgaaaacgtgttgaattaacgtagtaattgtgtacagatcttagctaatgcataggatgatgatt 11250971  T
Q  214 ggaatcaatttta 226  Q
     ||| || |||||    
T  11250972 agaaccagtttta 11250984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 20501218 - 20501266
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaag 54  Q
    |||||||| || ||||||||||||||||||||| ||||||  |||||||    
T  20501218 gatcgattttcttaaggtaagggtgggactaacattcaatcttcttaag 20501266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 43113000 - 43112945
Alignment:
Q  98 ttttagaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaa 154  Q
    |||||||||||||  |||||||||||||||  |||||||||||| |||| |||||||    
T  43113000 ttttagaatttgga-attagggttaaaagttgtaaattgatgattagataatggaaa 43112945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 114; Significance: 9e-58; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 12098 - 12307
Alignment:
Q  1 ttgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttt 100  Q
    |||||||||| | ||| |||||||||||||||||||||||||||||||  | ||||||||| |||||||| ||||||||||||||||||||| | |||||    
T  12098 ttgccgatcgttaatcctaaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaatcgaatttaacatggttgtaggttgaagttt 12197  T
Q  101 tagaatttg-gggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatcc 199  Q
    ||||||||| | ||||||||||||||||||  ||||||||||  ||||||||| ||| ||||||| |||||||||||||||| || ||||||| ||||||    
T  12198 tagaatttgagagattagggttaaaagtgagtaattgatgattggatgatggacaaccgttgaattgatgtagaaactgtgtacataccttagataatcc 12297  T
Q  200 ataggatgat 209  Q
    ||| ||||||    
T  12298 atatgatgat 12307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 104; Significance: 8e-52; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 3877 - 4104
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagttt 100  Q
    |||| |||||||||| ||||||||||| |||||||||||||||||||  | ||||||| | ||||||| ||||||||||||||||||||||| |  ||||    
T  3877 tgccaatcgattatcctaaggtaagggagggactaaccttcaataattatgagtatgtaattctgaaaattgaatttaacatggttgtaggttgaggttt 3976  T
Q  101 tagaatttggg-gattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatcc 199  Q
    ||||||||| | ||||||||||||||||||  |||||||||| |||||||||||||| | ||||| |||||||||||| ||| || ||||||| ||||||    
T  3977 tagaatttgagagattagggttaaaagtgaggaattgatgattagatgatggaaaaccgatgaattgatgtagaaactatgtacataccttagataatcc 4076  T
Q  200 ataggatgatgattggaatcaattttaa 227  Q
    ||| |||||| || | ||||| ||||||    
T  4077 atatgatgataatcgaaatcagttttaa 4104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 13871 - 14098
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagttt 100  Q
    |||| |||||||||  ||||||||||||||||| |||||||||||||  | ||||||| | ||| ||| ||||||||||||||||||||||| |  ||||    
T  13871 tgccaatcgattattctaaggtaagggtgggaccaaccttcaataattgtgagtatgtaattctaaaaattgaatttaacatggttgtaggttgaggttt 13970  T
Q  101 tagaatttggg-gattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatcc 199  Q
    || |||||| | ||||||||||||||||||  |||||||||| |||||||||||||| | |||||  ||||||||||||||| || ||||||| ||||||    
T  13971 taaaatttgagagattagggttaaaagtgaggaattgatgattagatgatggaaaaccgatgaattaatgtagaaactgtgtacataccttagataatcc 14070  T
Q  200 ataggatgatgattggaatcaattttaa 227  Q
    |||| ||||| || | ||||| ||||||    
T  14071 atagaatgataatcgaaatcagttttaa 14098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 56009 - 55783
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt 101  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||||  | ||||||||| ||||||||||||||||||||||||||||||   ||||||    
T  56009 tgccaatcgattatcctaaggtaagggtgagactaaccttcaataattctgagtatgtgattctgaaattgaatttaacatggttgtaggttaaagtttt 55910  T
Q  102 agaatttggggattagggttaaaagtgataaattga-tgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatcca 200  Q
    |||||||| | ||||||||||||| ||   |||| |  ||| ||||||||||||  |||||||| |||||||||| ||||| || ||||||| |||||||    
T  55909 agaatttgagaattagggttaaaattggagaattaaccgattagatgatggaaacatgttgaattgatgtagaaattgtgtacaaaccttagataatcca 55810  T
Q  201 taggatgatgattggaatcaattttaa 227  Q
    ||||||||| ||| ||||| |||||||    
T  55809 taggatgataattagaatcgattttaa 55783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 4217 - 4016
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggattag 117  Q
    |||||||| |||| ||||||||||||||| |  ||||||||||| ||||||||| |||||||||||||||||||| | | |||||| ||||| | |||||    
T  4217 taaggtaaaggtgagactaaccttcaatacttctaagtatgtgattctgaaattcaatttaacatggttgtaggttgaatttttaggatttgagaattag 4118  T
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||  | |||||||| |||||  ||||||||||||||| |||||||||| ||||| || ||||||| |||| |||||||||||| || |||    
T  4117 ggttaaaagtgaggatttgatgattagatg-gggaaaactgttgaattgatgtagaaattgtgtacaaaccttagataattcataggatgatgtttagaa 4019  T
Q  218 tca 220  Q
    |||    
T  4018 tca 4016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 227
Target Start/End: Complemental strand, 31173 - 30951
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagttttag 103  Q
    |||||||||| | |||||||||||||||||||||||||||||||  | ||||||| | ||||||| ||| |||||||| | |||||||| |||||||  |    
T  31173 cgatcgattaacctaaggtaagggtgggactaaccttcaataattctgagtatgtaattctgaaaattggatttaacaag-ttgtaggttgtagtttggg 31075  T
Q  104 aatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatag 203  Q
    |||||||| |||||||||||||||  ||||||| |||| ||||||||||||  |||||||| ||| |||||||||||| || ||||||| | ||  |||     
T  31074 aatttgggaattagggttaaaagttgtaaattgttgattagatgatggaaatttgttgaattgatatagaaactgtgtacaaaccttagatgattgatat 30975  T
Q  204 gatgatgattggaatcaattttaa 227  Q
    |||||||||| |||||| ||||||    
T  30974 gatgatgattagaatcagttttaa 30951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 36599 - 36712
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||| ||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  | |||||| | ||    
T  36599 taaggtaagtgtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttaaaaatttgagaat 36696  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  36697 tagggttaagagtgat 36712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 1171 - 1382
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt-agaatttggg-gatt 115  Q
    |||||||||||||||| |||||| ||||||   | ||||||| | ||| |||||||||||||||||| ||||||| ||| |||| || |||||   ||||    
T  1171 taaggtaagggtgggagtaacctgcaataactctgagtatgtaattctaaaattgaatttaacatggctgtaggttgtattttttaggatttgacagatt 1270  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgg 215  Q
    ||||||||||||||  |||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||| ||| |||||||||||| ||| ||  |    
T  1271 agggttaaaagtgaggaattgatgattagatgatggaaaaccgttgaattgatgtagaaactgtgtacagaccatagataatccataggaagataatcag 1370  T
Q  216 aatcaattttaa 227  Q
    ||||| ||||||    
T  1371 aatcagttttaa 1382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 10387 - 10196
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| ||||| ||||| ||||| |||| |||| |||  ||||||| |||||||||| |||    
T  10387 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattgcatttagcatg-ttgttggtt-tagttttgagaatttgggaatt 10290  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||  || |||||||||||||||| |||||||||| ||||||||||||||||    
T  10289 agggttaaaagtgatgaattgaggattagatgatggaaaactgttagattgatgtagaaactgtgtacagaccttagataatccataggatgat 10196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 7e-37; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 18 - 228
Target Start/End: Original strand, 24792759 - 24792969
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggattag 117  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||||||||||||||||||||| | ||| |||||||||| | |||||    
T  24792759 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaactgaatttaacatggttgtaggttggagtcttagaatttgagaattag 24792858  T
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    |||||||| ||   ||||  | |    |   | |||| ||||||||| |||||||||||||||| || ||||||| |||||||||||||||| || ||||    
T  24792859 ggttaaaattggagaattagtcaattaagagtagaaacctgttgaattgatgtagaaactgtgtacaaaccttagataatccataggatgataataggaa 24792958  T
Q  218 tcaattttaaa 228  Q
    ||| |||||||    
T  24792959 tcagttttaaa 24792969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 228
Target Start/End: Original strand, 24834009 - 24834233
Alignment:
Q  4 ccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttag 103  Q
    ||||||| | ||| |||||||||||||||||||||| ||||||||  | ||||||||| || ||||||||||||||||||||||||||| | ||||||||    
T  24834009 ccgatcgttaatcctaaggtaagggtgggactaaccatcaataattctgagtatgtgattccgaaattgaatttaacatggttgtaggttggagttttag 24834108  T
Q  104 aatttggggattagggttaaaagt-gataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccata 202  Q
    ||||||   ||||||||||||| | || || | |   || | | | | ||||  |||||||| |||||||||||||||| |||||||||| |||||||||    
T  24834109 aatttgataattagggttaaaattggagaattagtcaattaaaag-tagaaacatgttgaattgatgtagaaactgtgtacagaccttagataatccata 24834207  T
Q  203 ggatgatgattggaatcaattttaaa 228  Q
    ||||||| || ||||||| |||||||    
T  24834208 ggatgataataggaatcagttttaaa 24834233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 39683264 - 39683139
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||||||||||||| |||||||||  |||||||  |||||||||| ||    
T  39683264 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattgaatttaacat-gttgtaggttttagtttttgagaatttgggaat 39683166  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  39683165 tagggttaaaagtgattatttgatgat 39683139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 24897411 - 24897534
Alignment:
Q  20 aggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggatta 116  Q
    ||||||||||||||||||| |||||||||||| ||| | ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||||| ||||    
T  24897411 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggttttagtttttgagaatttgggaatta 24897509  T
Q  117 gggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| ||||||||||    
T  24897510 gggttaaaagtgattaattgatgat 24897534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 24899894 - 24900017
Alignment:
Q  20 aggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggatta 116  Q
    ||||||||||||||||||| |||||||||||| ||| | ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||||| ||||    
T  24899894 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggttttagtttttgagaatttgggaatta 24899992  T
Q  117 gggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| ||||||||||    
T  24899993 gggttaaaagtgattaattgatgat 24900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 24902371 - 24902494
Alignment:
Q  20 aggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggatta 116  Q
    ||||||||||||||||||| |||||||||||| ||| | ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||||| ||||    
T  24902371 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggttttagtttttgagaatttgggaatta 24902469  T
Q  117 gggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| ||||||||||    
T  24902470 gggttaaaagtgattaattgatgat 24902494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 24904848 - 24904971
Alignment:
Q  20 aggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggatta 116  Q
    ||||||||||||||||||| |||||||||||| ||| | ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||||| ||||    
T  24904848 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg-ttgtaggttttagtttttgagaatttgggaatta 24904946  T
Q  117 gggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| ||||||||||    
T  24904947 gggttaaaagtgattaattgatgat 24904971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 18809891 - 18809766
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  18809891 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 18809793  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  18809792 tagggttaaaagtgattatttgatgat 18809766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 23711227 - 23711352
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  23711227 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 23711325  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  23711326 tagggttaaaagtgattatttgatgat 23711352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 27473520 - 27473417
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaa 105  Q
    |||||||| || |||| ||||||||||||||||||||||||||  | ||||||||| ||||||  |||||||||||||||||||||| |  |||||||||    
T  27473520 gatcgattttcttaagttaagggtgggactaaccttcaataattatgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaa 27473421  T
Q  106 tttg 109  Q
    ||||    
T  27473420 tttg 27473417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 32038711 - 32038836
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  32038711 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 32038809  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  32038810 tagggttaaaagtgattatttgatgat 32038836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 34858192 - 34858283
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    ||||||||||||||||||||||||||||||| || ||||||||| ||||||  |||||||||||||||| ||||| |  |||||||||||||    
T  34858192 taaggtaagggtgggactaaccttcaataattttgagtatgtgattctgaagatgaatttaacatggttttaggttgaggttttagaatttg 34858283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 34873254 - 34873345
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    ||||||||||||||||||||||||||||||| || ||||||||| ||||||  |||||||||||||||| ||||| |  |||||||||||||    
T  34873254 taaggtaagggtgggactaaccttcaataattttgagtatgtgattctgaagatgaatttaacatggttttaggttgaggttttagaatttg 34873345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 24907323 - 24907443
Alignment:
Q  20 aggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatta 116  Q
    ||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||||    
T  24907323 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggttttagtttttgagaatttgggaatta 24907421  T
Q  117 gggttaaaagtgataaattgat 138  Q
    |||||||||||||| |||||||    
T  24907422 gggttaaaagtgattaattgat 24907443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 23131810 - 23131685
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||  ||    
T  23131810 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttggaaat 23131712  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  23131711 tagggttaaaagtgattatttgatgat 23131685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 23134277 - 23134152
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||  ||    
T  23134277 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttggaaat 23134179  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  23134178 tagggttaaaagtgattatttgatgat 23134152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 26508805 - 26508680
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||||||   ||| ||| ||||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  26508805 taaggtaagggtgagactaacattcaataatcttaagtcattgattctggaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 26508707  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  26508706 tagggttaaaagtgattatttgatgat 26508680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 34401736 - 34401861
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||  ||    
T  34401736 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttggaaat 34401834  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  34401835 tagggttaaaagtgattatttgatgat 34401861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 572347 - 572224
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg--aaattgaatttaacatggttgtaggtagtagtttt--agaatttgggga 113  Q
    ||||||||||||||||||||| ||||||||||||||||    || ||||  |||||| ||||||||| |||||||||  |||||||  |||||||||| |    
T  572347 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaa 572249  T
Q  114 ttagggttaaaagtgataaattgat 138  Q
    ||||||||||||||||| |||||||    
T  572248 ttagggttaaaagtgattaattgat 572224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 22695294 - 22695158
Alignment:
Q  7 atcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--ag 103  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||  ||||||||| |||||||||  |||||||  ||    
T  22695294 atcgattaacctaaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaatttgatttaacat-gttgtaggttttagtttttgag 22695196  T
Q  104 aatttggggattagggttaaaagtgataaattgatgat 141  Q
    |||||||| ||||||||||||| |||| | ||||||||    
T  22695195 aatttgggaattagggttaaaaatgattatttgatgat 22695158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 27845514 - 27845401
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    |||||||||||||||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| ||| | || ||||||| ||||||||||||||||| |    
T  27845514 attagggttaaaagtgataa-ttgaggattagatgatggaaatttgtagaattgatgtagaaagtgtatacataccttagataatccataggatgatgtt 27845416  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  27845415 tagaatcagttttaa 27845401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 28578053 - 28577939
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    |||||||||||| |||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  28578053 taaggtaagggtaggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 28577955  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||||||||||    
T  28577954 tagggttaaaagtgat 28577939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 23136516 - 23136391
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||  ||||||||||||||||    || |||| |||||| ||||||||| |||||||||  | |||||  |||||||||| ||    
T  23136516 taaggtaagggtgggactaatattcaataatcttaagtcatcgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgggaat 23136418  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  23136417 tagggttaaaagtgattaattgatgat 23136391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 26506327 - 26506202
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||||||   | | |||| |||||| |||||||||| ||||||||  |||||||  |||||||||| ||    
T  26506327 taaggtaagggtgagactaacattcaataatcttaagtcattaattctggaaattggatttaacatg-ttgtaggttttagtttttgagaatttgggaat 26506229  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  26506228 tagggttaaaagtgattatttgatgat 26506202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 27919978 - 27920103
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||||||   | | |||| |||||| |||||||||| ||||||||  |||||||  |||||||||| ||    
T  27919978 taaggtaagggtgagactaacattcaataatcttaagtcattaattctggaaattggatttaacatg-ttgtaggttttagtttttgagaatttgggaat 27920076  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  27920077 tagggttaaaagtgattatttgatgat 27920103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 18546238 - 18546351
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| ||||| |||||||||| ||||||||| | ||||| |    
T  18546238 attagggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatccatatggtgatgtt 18546336  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  18546337 tagaatcagttttaa 18546351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 38968425 - 38968303
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||||||| | ||| ||| ||| ||| ||||||||||    |||||  |||||||  |||||||| | ||    
T  38968425 taaggtaagggtgggactaacattcaataatcttaagtctatgattctaaaaattggatttaacatg----taggttttagtttttgagaatttgagaat 38968330  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  38968329 tagggttaaaagtgattaattgatgat 38968303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 9785589 - 9785466
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatta 116  Q
    |||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| |||||| || |||||| ||  ||||||| |||||||||| ||||    
T  9785589 aaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaatat-gttgtaagttttagttttgagaatttgggaatta 9785491  T
Q  117 gggttaaaagtgataaattgatgat 141  Q
    ||||||||| |||| | ||||||||    
T  9785490 gggttaaaattgattatttgatgat 9785466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 20916355 - 20916268
Alignment:
Q  22 gtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    |||||||||| ||||||||||||||||  | ||||||||| | ||||  |||||||||||||||||||||| |  |||||||||||||    
T  20916355 gtaagggtggaactaaccttcaataattctgagtatgtgattttgaagatgaatttaacatggttgtaggttgatgttttagaatttg 20916268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 24368668 - 24368555
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt---agaatttggggat 114  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||| |||||||   |||||||| | ||    
T  24368668 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggta-tagttttttgagaatttgagaat 24368571  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  24368570 tagggttaagagtgat 24368555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 22106307 - 22106194
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  22106307 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 22106210  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  22106209 tagggttaagagtgat 22106194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 23932302 - 23932189
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  23932302 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 23932205  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  23932204 tagggttaatagtgat 23932189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 32214250 - 32214363
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  32214250 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 32214347  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  32214348 tagggttaagagtgat 32214363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 6726888 - 6726776
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | |||    
T  6726888 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaatt 6726791  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  6726790 agggttaagagtgat 6726776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 18388190 - 18388300
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||||||||||| |||||||||||||||||| | ||||| ||| |||| |||||| ||||||||  ||||||||| ||||||||  ||||||||| |||    
T  18388190 taaggtaagggtgagactaaccttcaataatcctgagtatatgattctgaaaattggatttaaca-agttgtaggttgtagttttgggaatttgggaatt 18388288  T
Q  116 agggttaaaagt 127  Q
    | ||||| ||||    
T  18388289 atggttagaagt 18388300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 24682278 - 24682204
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||||||||| |||||||||||||||| | ||| |||| |||||| ||||||||| |||||||||    
T  24682278 taaggtaagggtgggactaacattcaataatcttaagtctatgattctgaaaattgtatttaacat-gttgtaggt 24682204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 26393374 - 26393166
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaa-attgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||||||||||| ||||||| ||||||  |||||||| ||| | |||||  ||| ||||||||| | ||||||||  ||||||| |||||| |   |||    
T  26393374 taaggtaagggtgagactaacattcaattctcttaagtctgtaattctgatgattaaatttaacaag-ttgtaggtt-tagttttgagaattggaaaatt 26393277  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgg 215  Q
    |||||||| |||| | ||||||||   |||||||| | || || ||||| |||||||||| ||| | |||||||||| ||||||||||| ||||| || |    
T  26393276 agggttaagagtg-tgaattgatggatagatgatgtagaattgctgaattgatgtagaaagtgtatacagaccttagataatccatagggtgatgtttag 26393178  T
Q  216 aatcaattttaa 227  Q
    ||||| ||||||    
T  26393177 aatcagttttaa 26393166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 25109739 - 25109633
Alignment:
Q  121 taaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatca 220  Q
    ||||||||| ||||||||||| |  ||||| |||  ||||  || |||||||||| ||||| |||||||||| |||||||||||||||| |  |||||||    
T  25109739 taaaagtgagaaattgatgattaattgatgaaaagttgttagattgatgtagaaaatgtgtacagaccttagataatccataggatgattacaggaatca 25109640  T
Q  221 attttaa 227  Q
     ||||||    
T  25109639 gttttaa 25109633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 34137821 - 34137708
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| | | ||||||||||||   || || | |||||||||| ||||| |||||||||| ||||||||||| ||||| |    
T  34137821 attagggttaagagtgataa-ttgagggttagatgatggaaactcgtagatttgatgtagaaagtgtgtacagaccttagataatccatagggtgatgtt 34137723  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  34137722 tcgaatcagttttaa 34137708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 23792152 - 23792057
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||| |||| ||||||||||| |  ||||| |||| ||||  || |||||||||||||||| ||||||||||| ||||| |||| ||||    
T  23792152 attagggttaaa-gtgagaaattgatgattaattgatgaaaaattgttagattgatgtagaaactgtgtacagaccttaggcaatccttaggttgat 23792057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 45027220 - 45027333
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  45027220 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 45027317  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  45027318 tagggttaagagtgat 45027333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 19358954 - 19358879
Alignment:
Q  7 atcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaaca 81  Q
    |||||||| | |||||||||||||||||||||||| ||||||  | ||||| ||| |||| |||||||||||||||    
T  19358954 atcgattaacctaaggtaagggtgggactaacctttaataattctgagtatatgattctgaaaattgaatttaaca 19358879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 28652552 - 28652603
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa 69  Q
    |||||||||||||||||||||||||| ||||| ||||||||| | |||||||    
T  28652552 taaggtaagggtgggactaaccttcattaatcataagtatgtaattctgaaa 28652603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 22412409 - 22412522
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    |||||||||||| |||| ||||||||||| |  ||||| | |  ||||| || |||||||||||||| | |||||||||| ||||||||| |||||| |     
T  22412409 attagggttaaa-gtgagaaattgatgattaattgatgtagatttgttggattgatgtagaaactgtttacagaccttagataatccatatgatgattac 22412507  T
Q  213 tggaatcaattttaa 227  Q
     ||||||||| ||||    
T  22412508 aggaatcaatgttaa 22412522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 22690670 - 22690562
Alignment:
Q  35 taaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggattagggttaaaagtgata 131  Q
    |||| ||||||||||||||||   ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||||| ||||||||||||| ||||     
T  22690670 taacattcaataatcttaagtcattgattctgaaaattggatttaacatg-ttgtaggttttagtttttgagaatttgggaattagggttaaaaatgatt 22690572  T
Q  132 aattgatgat 141  Q
    | ||||||||    
T  22690571 atttgatgat 22690562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 23706346 - 23706412
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatg 83  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||||    
T  23706346 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg 23706412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 24918982 - 24918869
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| ||||||| ||  ||||| |||| ||||||||  |||||||  |||||||| | ||    
T  24918982 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattctatttaccatg-ttgtaggtt-tagtttttgagaatttgagaat 24918885  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  24918884 tagggttaagagtgat 24918869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 18786158 - 18786201
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||||| | |||||||||| ||||||||||||||||    
T  18786158 gatgtagaaactgtttacagaccttagataatccataggatgat 18786201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 22458835 - 22458878
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||||| | |||||||||| ||||||||||||||||    
T  22458835 gatgtagaaactgtttacagaccttagataatccataggatgat 22458878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 24671866 - 24671754
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||  |||||| |||||| || |||||||||  |||||||  |||||||| | |||    
T  24671866 aaggtaagggtgggactaacattcaataatcttgagtctatgattctaaaaattgtatttaatat-gttgtaggt-ttagtttttgagaatttgagaatt 24671769  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  24671768 agggttaagagtgat 24671754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 12626426 - 12626464
Alignment:
Q  17 gtaaggtaagggtgggactaaccttcaataatcttaagt 55  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  12626426 gtaaggtaagggtgggactaaccttcattaatcataagt 12626464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 20519416 - 20519529
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    |||||||||||| |||| ||||||||||| |  ||||| | || ||||  || |||||||||||||| |  |||||||||  |||||||||||||||       
T  20519416 attagggttaaa-gtgagaaattgatgattaattgatgtagaattgttagattgatgtagaaactgtttatagaccttagacaatccataggatgatatc 20519514  T
Q  213 tggaatcaattttaa 227  Q
    |||||||||| ||||    
T  20519515 tggaatcaatgttaa 20519529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 23005611 - 23005533
Alignment:
Q  131 aaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    ||||||||||| |  ||||| |||| |||| |||  ||||||||||||| | |||||||||| ||||||||||| ||||    
T  23005611 aaattgatgattaattgatgaaaaattgttaaatttatgtagaaactgtttacagaccttagataatccataggttgat 23005533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 23068408 - 23068544
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgact-ctgaaa-ttgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    |||||||||||| ||||| |||||||||||  ||||| | | | | |||||| ||| |||||||||| ||||||||  ||||||| || ||||||| |||    
T  23068408 aaggtaagggtgagactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatg-ttgtaggtt-tagttttgaggatttgggaatt 23068505  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaa 154  Q
     |||||||||||||||||||| |||| | ||||| ||||    
T  23068506 cgggttaaaagtgataaattgttgattatatgattgaaa 23068544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 25616628 - 25616578
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa 69  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||||||    
T  25616628 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaa 25616578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 43946613 - 43946726
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| ||||| || |||| ||| |||||||| ||   ||| |||  |||||||||| ||| | |||||||||| ||||||||||| ||||| |    
T  43946613 attagggttaagagtgagaa-ttgaggattagatgatgaaattttgtagaactgatgtagaaagtgtatacagaccttagataatccatagggtgatgtt 43946711  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  43946712 ttgaatcagttttaa 43946726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 23208122 - 23208061
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    |||||||||||||| | |||||||||| ||||||||| |||||| |  ||||||||| ||||    
T  23208122 gatgtagaaactgtttacagaccttagataatccatatgatgattacaggaatcaatgttaa 23208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 21154136 - 21154241
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||| ||||||||||| |||||||||||| ||| | ||| |||| |||||| |||||| || |||||||||  |||||||  |||||||| | |||    
T  21154136 aaggtaagagtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatat-gttgtaggt-ttagtttttgagaatttgagaatt 21154233  T
Q  116 agggttaa 123  Q
    ||||||||    
T  21154234 agggttaa 21154241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 23079862 - 23079910
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaag 54  Q
    |||||||| || ||||||||||||||||||||| ||||||  |||||||    
T  23079862 gatcgattttcttaaggtaagggtgggactaacattcaattttcttaag 23079910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 16385 - 16176
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||| ||||||||||| | | | ||||||| |||  ||||||||| ||||||||  |||||||  |||||||||| ||    
T  16385 taaggtaagggtgggactaacattcattaatcttaagtctattattctgaaaattgcctttaacatg-ttgtaggtt-tagtttttgagaatttgggaat 16288  T
Q  115 tagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattg 214  Q
    |||| ||||||||||| |||||| ||| ||||||||||||| ||| ||||  |||||||||||  || |||||||||| ||||||||||| |||| ||||    
T  16287 tagg-ttaaaagtgatcaattgaggattagatgatggaaaattgtagaattaatgtagaaactaagtacagaccttagataatccatagggtgataattg 16189  T
Q  215 gaatcaattttaa 227  Q
    |||||| ||||||    
T  16188 gaatcagttttaa 16176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 46752174 - 46752049
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt 101  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||||  | ||||||||| ||||||||||||||||||||||||||||||   ||||||    
T  46752174 tgccgatcgttaatcctaaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaattgaatttaacatggttgtaggttaaagtttt 46752075  T
Q  102 agaatttggggattagggttaaaagt 127  Q
    || ||||| | |||||||||||||||    
T  46752074 aggatttgagaattagggttaaaagt 46752049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 14604914 - 14604725
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||||||||||||||||||  |||||| |||||||||   ||| ||||||| ||| ||||||| || |||||| |  ||||||| |||||||||  |||    
T  14604914 taaggtaagggtgggactaatattcaattatcttaagtcattgattctgaaaattgtatttaacttg-ttgtagctt-tagttttgagaatttgga-att 14604818  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatga 208  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||  || |||||||||||||||| |||||||||| ||||||||| |||||    
T  14604817 agggttaaaagtgatgaattgaggattagatgatggaaaactgttagattgatgtagaaactgtgtacagaccttagataatccatatgatga 14604725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 16828281 - 16828490
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt---agaatttggggat 114  Q
    ||||||||||||||||||| | |||| | ||||||||| | ||| |||||||||| |||||||||| |   ||||  |||||||   |||||||| | ||    
T  16828281 taaggtaagggtgggactatcattcagtgatcttaagtctatgattctgaaattggatttaacatgtt---aggttttagtttttggagaatttgagaat 16828377  T
Q  115 tagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattg 214  Q
    |||||||||||||||||| |||||||| ||||| || |||  ||||||||  |||||| |||| ||| || ||||||| |||| |||||||||||||||     
T  16828378 tagggttaaaagtgataatttgatgattagatggtgaaaacgtgttgaattaatgtagtaactatgtacaaaccttagataatgcataggatgatgatta 16828477  T
Q  215 gaatcaattttaa 227  Q
    |||||| ||||||    
T  16828478 gaatcagttttaa 16828490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 37428667 - 37428458
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaa-attgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||  |||||||||| |||||   ||| |||||| |||| ||| |||||| ||||||||  |||||||  |||||||| | ||    
T  37428667 taaggtaagggtgggactaatattcaataatcctaagtcattgattctgaatattgtattcaacatg-ttgtaggtt-tagtttttgagaatttgagaat 37428570  T
Q  115 tagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattg 214  Q
    ||||||||| |||||||| |||| ||| ||||||||||||||||||  || |||||||||| ||||| ||||||||||  |||||||||| ||||  ||     
T  37428569 tagggttaagagtgataa-ttgacgattagatgatggaaaactgttagattgatgtagaaagtgtgtacagaccttagacaatccatagggtgattttta 37428471  T
Q  215 gaatcaattttaa 227  Q
    |||||| ||||||    
T  37428470 gaatcagttttaa 37428458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 6804892 - 6804983
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    ||||||||||||| |||||||||||||||||  | ||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||    
T  6804892 taaggtaagggtgagactaaccttcaataattctgagtatgtgattctgaaattgaatttaacatggttgtaggttaaagttttagaatttg 6804983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 11202285 - 11202065
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagttttaga 104  Q
    |||||||| || ||||||||||||| ||||| | ||||||  |||||||| | ||| ||||| ||||  |||||||||| | | |||| |||||||| |     
T  11202285 gatcgattttcttaaggtaagggtgagactagcattcaatcttcttaagtctatgattctgataattagatttaacatgttag-aggt-gtagttttggg 11202188  T
Q  105 atttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatagg 204  Q
    | |||  || |  ||||||||||||  |||||||||| |||||||| |||| ||||  || |||||||||| ||||| |||||||||| |||||||||||    
T  11202187 aattgaagaattaggttaaaagtgaggaattgatgattagatgatgaaaaagtgttagattgatgtagaaaatgtgtacagaccttagataatccatagg 11202088  T
Q  205 atgatgattggaatcaattttaa 227  Q
    ||||| |||||||||| ||||||    
T  11202087 atgataattggaatcagttttaa 11202065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 17464126 - 17464001
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  17464126 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 17464028  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  17464027 tagggttaaaagtgattatttgatgat 17464001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 34160274 - 34160149
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  34160274 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 34160176  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  34160175 tagggttaaaagtgattatttgatgat 34160149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 45577655 - 45577780
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||||||||  ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  45577655 taaggtaagggtgagactaacattcaataatcttaagtaattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 45577753  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  45577754 tagggttaaaagtgattatttgatgat 45577780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 1864367 - 1864492
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||    || |||| |||||| |||||||||| ||||||||  |||||||  |||||||||| ||    
T  1864367 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctggaaattggatttaacatg-ttgtaggttttagtttttgagaatttgggaat 1864465  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  1864466 tagggttaaaagtggttaattgatgat 1864492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 10246936 - 10247061
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||  ||    
T  10246936 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttggaaat 10247034  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  10247035 tagggttaaaagtgattatttgatgat 10247061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 15978483 - 15978358
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||||| ||    
T  15978483 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgggaat 15978385  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  15978384 tagggttaaaagtgattatttgatgat 15978358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 52988858 - 52988949
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    ||||||||||||| |||||||||||||||||  | ||||||||| ||||||  |||||||||||||||||||||| |  |||||||||||||    
T  52988858 taaggtaagggtgagactaaccttcaataattctgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaatttg 52988949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 55477440 - 55477315
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  55477440 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 55477342  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  55477341 tagggttaaaagtgattatttgatgat 55477315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 15266035 - 15265926
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||| |||||| ||| |||||||||| | |||| |||| |||||||||| ||| | |||||||||| ||||||||||| ||||| || |||    
T  15266035 ggttaaaagtgatcaattgaggattagatgatggatatctgtagaattgatgtagaaagtgtatacagaccttagataatccatagggtgatgtttagaa 15265936  T
Q  218 tcaattttaa 227  Q
    ||| ||||||    
T  15265935 tcagttttaa 15265926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 7780559 - 7780684
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||| | ||    
T  7780559 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgagaat 7780657  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  7780658 tagggttaaaagtggttaattgatgat 7780684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 13151002 - 13151127
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||    || |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  13151002 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 13151100  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    || ||||||||||| | ||||||||||    
T  13151101 taaggttaaaagtggttaattgatgat 13151127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 13153470 - 13153595
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||    || |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  13153470 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 13153568  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    || ||||||||||| | ||||||||||    
T  13153569 taaggttaaaagtggttaattgatgat 13153595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 9578609 - 9578389
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaa-attgaatttaacatggttgtagg--tagtagtttta 102  Q
    |||||||| || ||||||||||||||||||||| ||||||  |||||||  | ||| |||||  |||  |||||||||| |||||||  ||||  |||||    
T  9578609 gatcgattttcttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatg-ttgtagggttagtt-tttta 9578512  T
Q  103 gaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccata 202  Q
    ||||| ||  ||||||||| | |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| ||||| |||||||||| |||| ||||    
T  9578511 gaatt-ggaaattagggtttagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataattcata 9578414  T
Q  203 ggatgatgattggaatcaattttaa 227  Q
    || ||||| || |||| | ||||||    
T  9578413 gggtgatgtttagaattagttttaa 9578389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 12119169 - 12119298
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagttt 100  Q
    |||| |||||||| | ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  ||||||    
T  12119169 tgccaatcgattaacctaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagttt 12119266  T
Q  101 t--agaatttggggattagggttaaaagtgat 130  Q
    |  |||||||| | ||||||||||| ||||||    
T  12119267 ttgagaatttgagaattagggttaagagtgat 12119298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 14967236 - 14967145
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    ||||||||||| |||||||||||||||||||  | || |||||| |||||   |||||||||||||||||||||| |  |||||||||||||    
T  14967236 taaggtaagggggggactaaccttcaataattctgagaatgtgattctgaggatgaatttaacatggttgtaggttgaggttttagaatttg 14967145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 15413379 - 15413254
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    |||||||||||||||| |||| ||||||||||||||||   ||| |||  |||||| ||||||||| || ||||||  |||||||  |||||||||| ||    
T  15413379 taaggtaagggtgggattaacattcaataatcttaagtcattgattctaaaaattggatttaacat-gtggtaggttttagtttttgagaatttgggaat 15413281  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  15413280 tagggttaaaagtgattatttgatgat 15413254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 16453489 - 16453614
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| |||||| || |||||||||  | |||||  |||||||| | ||    
T  16453489 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaatat-gttgtaggttttcgtttttgagaatttgagaat 16453587  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  16453588 tagggttaaaagtggttaattgatgat 16453614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 28847833 - 28847958
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||  ||||||||||||||||    || |||| |||||| ||||||||| |||||||||  | |||||  |||||||||| ||    
T  28847833 taaggtaagggtgggactaatattcaataatcttaagtcatcgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgggaat 28847931  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| |||| |||||    
T  28847932 tagggttaaaagtgattaattcatgat 28847958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 13522202 - 13522276
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||||||| | ||||||  |||||||  | ||| ||||||||||||||||||||||||||||||    
T  13522202 taaggtaagggtgggactagcattcaatcttcttaagcctatgattctgaaattgaatttaacatggttgtaggt 13522276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 6468335 - 6468473
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-- 101  Q
    |||||| | ||| |||||||||||||||| |||| ||||||||||||||||   ||| |||| |||||  ||||||||| |||||||||  |||||||      
T  6468335 cgatcgttaatcttaaggtaagggtgggagtaacattcaataatcttaagtcattgattctgaaaattagatttaacat-gttgtaggttttagtttttg 6468433  T
Q  102 agaatttggggattagggttaaaagtgataaattgatgat 141  Q
    |||||||||| |||||||||| || |||| | ||||||||    
T  6468434 agaatttgggaattagggttacaaatgattatttgatgat 6468473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 14671832 - 14671709
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatta 116  Q
    |||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||| || || |||||| ||  ||||||| |||||||||| ||||    
T  14671832 aaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggattgaatat-gttgtaagttttagttttgagaatttgggaatta 14671734  T
Q  117 gggttaaaagtgataaattgatgat 141  Q
    ||||||||| |||| | ||||||||    
T  14671733 gggttaaaattgattatttgatgat 14671709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 46823119 - 46822990
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagttt 100  Q
    ||||||||| | ||| ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||| | ||||||||| |||||||||  ||||||    
T  46823119 tgccgatcgttaatcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaatcgtatttaacat-gttgtaggt-ttagttt 46823022  T
Q  101 t--agaatttggggattagggttaaaagtgat 130  Q
    |  |||||||| | ||||||||||| ||||||    
T  46823021 ttgagaatttgagaattagggttaagagtgat 46822990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 13937295 - 13937407
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | |||    
T  13937295 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaatt 13937392  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  13937393 agggttaagagtgat 13937407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 15246900 - 15246805
Alignment:
Q  132 aattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    |||||| ||| ||||||||||||  ||| |||| |||||||||| ||| | |||||||||| ||||||||||| ||||| || |||||| ||||||    
T  15246900 aattgaggattagatgatggaaatttgtagaattgatgtagaaagtgtatacagaccttagataatccatagggtgatgtttagaatcagttttaa 15246805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 41124780 - 41124668
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | |||    
T  41124780 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaatt 41124683  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  41124682 agggttaagagtgat 41124668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 49968859 - 49968969
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||||||| |||||||||||||||| ||||  ||||| | ||| |||| ||||||||||||||| |||||||| | |||||||| |||||||||| |||    
T  49968859 taaggtaagagtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaaca-ggttgtagcttgtagttttgagaatttgggaatt 49968957  T
Q  116 agggttaaaagt 127  Q
    ||| ||| ||||    
T  49968958 aggtttataagt 49968969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 13919728 - 13919615
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| ||||| || || ||| | |||||||| | || ||| |||| |||||||||| ||| | |||||||||| ||||||||||| ||||| |    
T  13919728 attagggttaagagtgagaa-ttaatggttagatgatgtagaattgtagaattgatgtagaaagtgtttacagaccttagataatccatagggtgatgtt 13919630  T
Q  213 tggaatcaattttaa 227  Q
    | |||||||||||||    
T  13919629 tagaatcaattttaa 13919615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 22758835 - 22758971
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgact-ctgaaa-ttgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    |||||||||||| |||||||||||||||||  ||||| | | | | |||||| ||| |||||||||| ||||||||  ||||||| || ||||||| |||    
T  22758835 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatg-ttgtaggtt-tagttttgaggatttgggaatt 22758932  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaa 154  Q
    ||||||||||||||||||||| |||| | ||||| ||||    
T  22758933 agggttaaaagtgataaattgttgattatatgattgaaa 22758971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 55318624 - 55318737
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||| ||  |||||||  |||||||| | ||    
T  55318624 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaagt-ttagtttttgagaatttgagaat 55318721  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  55318722 tagggttaagagtgat 55318737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 24514325 - 24514251
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||    
T  24514325 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt 24514251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 38961158 - 38961271
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtagg--tagtagttttagaatttggggatt 115  Q
    |||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| ||||||||  ||||  ||| |||||||| | |||    
T  38961158 aaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggtttagttttttgagaatttgagaatt 38961256  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  38961257 agggttaagagtgat 38961271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 320116 - 320003
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| ||| |||| ||||||   |||||||| | || || | ||| |||||||||| ||||  |||||||||| |||||||||||||||| ||    
T  320116 attagggttaagagtcataa-ttgatggatagatgatgtagaattgctaaattgatgtagaaagtgtggacagaccttagataatccataggatgattat 320018  T
Q  213 tggaatcaattttaa 227  Q
     ||||||| ||||||    
T  320017 aggaatcagttttaa 320003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 18699431 - 18699567
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgact-ctgaaa-ttgaatttaacatggttgtaggtagtagttttaga-atttggggatt 115  Q
    |||||||||||||||||| |||||||||||  ||||| | | | | |||||| ||| |||||||||| ||||||||  |||||||| | ||||||  |||    
T  18699431 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatg-ttgtaggtt-tagttttaaagatttggaaatt 18699528  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaa 154  Q
    ||||||||||||||||||||| |||| | ||||| ||||    
T  18699529 agggttaaaagtgataaattgttgattatatgattgaaa 18699567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 23318031 - 23318144
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| ||| |||||| ||||   |||||||| | || || ||||| |||||||||| ||| | || ||||||| ||||||||||||||||| |    
T  23318031 attagggttaagagtcataaat-gatggatagatgatgtagaattgctgaattgatgtagaaagtgtttacataccttagataatccataggatgatgtt 23318129  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  23318130 tagaatcagttttaa 23318144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 8927555 - 8927620
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatg 83  Q
    ||||||||||||||||||| | |||| ||||||||||| | | | |||||||||| ||||||||||    
T  8927555 taaggtaagggtgggactatcattcagtaatcttaagtttataattctgaaattggatttaacatg 8927620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 10379994 - 10379868
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt-- 101  Q
    |||||| | ||| ||||||||||||||||||||| |||||||||||| ||| | ||| ||||||| ||| |||||| ||| |||||| |  |||||||      
T  10379994 cgatcgttaatcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatg-ttgtagatt-tagtttttg 10379897  T
Q  102 agaatttggggattagggttaaaagtgat 130  Q
    |||||||| | ||||||||||| ||||||    
T  10379896 agaatttgagaattagggttaagagtgat 10379868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 20629512 - 20629577
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacat 82  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| |||||||||    
T  20629512 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat 20629577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 22146768 - 22146833
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatg 83  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| |||||||||| ||||||||||    
T  22146768 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaaattggatttaacatg 22146833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 37641504 - 37641569
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatg 83  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| |||||||||| ||||||||||    
T  37641504 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaaattggatttaacatg 37641569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 45606140 - 45606177
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagt 55  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  45606140 taaggtaagggtgggactaacattcaataatcttaagt 45606177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 16282079 - 16282191
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| |||||| || |||||||||  |||||||  |||||||| | |||    
T  16282079 aaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaatat-gttgtaggt-ttagtttttgagaatttgagaatt 16282176  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  16282177 agggttaagagtgat 16282191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 17444084 - 17444196
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| |||||| || |||||||||  |||||||  |||||||  | |||    
T  17444084 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatat-gttgtaggt-ttagtttttgagaatttaagaatt 17444181  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  17444182 agggttaagagtgat 17444196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 21838275 - 21838236
Alignment:
Q  170 tagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  21838275 tagaaactgtgtacagaccttagataatccataggatgat 21838236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 37039051 - 37038925
Alignment:
Q  67 aaattgaatttaacatggttgtaggtagtagttttag-aatttgggga-ttagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaat 164  Q
    |||||| |||||||||| |||||||| |||||||| | |||||||| | ||||||||||||||  ||| | | |||| ||||||| |||| |||||||||    
T  37039051 aaattggatttaacatg-ttgtaggttgtagttttgggaatttgggaaattagggttaaaagttgtaattggttgattagatgatagaaacctgttgaat 37038953  T
Q  165 ggatgtagaaactgtgtgcagaccttag 192  Q
      ||| ||||||  ||| ||||||||||    
T  37038952 taatgaagaaacgatgttcagaccttag 37038925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 40957293 - 40957199
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt 101  Q
    ||||||||| | ||| ||||| ||| |||||||||| ||||||  | ||||| ||| ||| |||||||||||||||| ||||| ||| ||||||||    
T  40957293 gatcgattaacctaaagtaagagtgagactaacctttaataattctgagtatatgattctaaaattgaatttaacat-gttgttggttgtagtttt 40957199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 13938301 - 13938374
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||| |||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||    
T  13938301 aaggtaagggtgggaataacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt 13938374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 43888756 - 43888892
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgact-ctgaaattga-atttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    |||||||||||||||||| || ||||||||  ||||| | | | | |||||| ||  |||||||||| ||||||||  ||||||| || ||||||| |||    
T  43888756 aaggtaagggtgggactagccatcaataattctaagtgttttaattctgaaaatggtatttaacatg-ttgtaggtt-tagttttgaggatttgggaatt 43888853  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaa 154  Q
    ||||||||||||||||||||| |||| | ||||| ||||    
T  43888854 agggttaaaagtgataaattgttgattatatgattgaaa 43888892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 1464781 - 1464842
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    |||||||||||||| | |||||||||| ||||||||||| |||| |  ||||||| ||||||    
T  1464781 gatgtagaaactgtttacagaccttagataatccatagggtgattacaggaatcagttttaa 1464842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 12470808 - 12470759
Alignment:
Q  105 atttggggattagggttaaaagtgataaattgatgatcagatgatggaaa 154  Q
    ||||||| |||||||||||||||||||||||| |||| | ||||| ||||    
T  12470808 atttgggaattagggttaaaagtgataaattgttgattatatgattgaaa 12470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 14568742 - 14568791
Alignment:
Q  161 gaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatg 210  Q
    |||| |||||||||| ||||| |||||||||| ||||||||||| |||||    
T  14568742 gaattgatgtagaaagtgtgtacagaccttagataatccatagggtgatg 14568791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 42387157 - 42387104
Alignment:
Q  169 gtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaat 222  Q
    ||||||||||| | |||||||||| |||||||||||||||| |  |||||||||    
T  42387157 gtagaaactgtttacagaccttagataatccataggatgattacaggaatcaat 42387104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 37250412 - 37250507
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||| |||| ||||||| ||| |  ||||| |||  ||||  || |||||||||||| | | |||||||||| ||||||||||||||||    
T  37250412 attagggttaaa-gtgagaaattgaggattaattgatgaaaagttgttagattgatgtagaaactatttacagaccttagataatccataggatgat 37250507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 73; Significance: 3e-33; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 209
Target Start/End: Original strand, 118743 - 118944
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt-aga 104  Q
    |||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |||||||||  ||||||||| |||| ||||  ||||||| |||    
T  118743 gatcgattttcttaaggtaagggtgggactaaccttcaataatcttgagtatgtgaatctgaaattagatttaacat-gttggaggt-ttagttttgaga 118840  T
Q  105 atttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatagg 204  Q
    ||| | | | || ||||||||||||  |||||||||| |||||||| |||| ||||  || |||||||||| ||| | ||||| |||| |||||||||||    
T  118841 attggagaacta-ggttaaaagtgaggaattgatgattagatgatgaaaaagtgttagattgatgtagaaagtgtttacagactttagataatccatagg 118939  T
Q  205 atgat 209  Q
    |||||    
T  118940 atgat 118944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 172109 - 172318
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggattag 117  Q
    ||||||||||||||||||| | |||| | ||||||||| | | | |||||||||| ||||||||||   || | |  |  ||| |||||||| | |||||    
T  172109 taaggtaagggtgggactatcattcagtgatcttaagtctataattctgaaattggatttaacatgtaagttgttcttgatttgagaatttgagaattag 172208  T
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||| | ||||||| ||| |||| ||||| || |||  ||||||||  ||||||||||||||| |||| ||||| ||||  |||||||||||||| |||    
T  172209 ggttagaggtgataatttggtgattagatggtgaaaacgtgttgaattaatgtagaaactgtgtacagaacttagataatgaataggatgatgattagaa 172308  T
Q  218 tcaattttaa 227  Q
    ||| ||||||    
T  172309 tcagttttaa 172318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 185110 - 184998
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | |||    
T  185110 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaatt 185013  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  185012 agggttaagagtgat 184998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 228 - 325
Target Start/End: Complemental strand, 42105943 - 42105846
Alignment:
Q  228 aaacttgtgacaattacaagttgctctgtttgaagtaacgtgattttgtgattcaatgtctgaacagtgcaattgcaaaacttgatttattgggagaa 325  Q
    |||||||| ||||||||||||||||   ||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  42105943 aaacttgtaacaattacaagttgcttcatttgaagtaacatgattttgtgattcaacgtctaaacagtgcaattgcaaaacttgatttattgggagaa 42105846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 51083226 - 51083101
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||||||| | ||| | || |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  51083226 taaggtaagggtgggactaacattcaataatcttaagtctatgattttgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 51083128  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  51083127 tagggttaaaagtgattaattgatgat 51083101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 13989814 - 13989689
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  13989814 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 13989716  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  13989715 tagggttaaaagtgattatttgatgat 13989689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 21995664 - 21995755
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    |||| |||||||||||||||||||||||||| || ||||||||| ||||||  |||||||||||||||||||||| |  |||||||||||||    
T  21995664 taagataagggtgggactaaccttcaataattttgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaatttg 21995755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 14237655 - 14237780
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||  |||||||||||||||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  14237655 taaggtaagggtgggactaatattcaataatcttaagtctatgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 14237753  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    ||||||||||||| || | ||||||||    
T  14237754 tagggttaaaagtaattatttgatgat 14237780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 21474298 - 21474423
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||    || |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  21474298 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 21474396  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  21474397 tagggttaaaagtgattatttgatgat 21474423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 21922503 - 21922628
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||||| ||    
T  21922503 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgggaat 21922601  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  21922602 tagggttaaaagtggttaattgatgat 21922628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 23592944 - 23593069
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||    || |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  23592944 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 23593042  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  23593043 tagggttaaaagtggttaattgatgat 23593069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 20958985 - 20958872
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||||||| ||||||||||||  ||| |||| |||||||||| ||||| || ||||||| ||||||||||| ||||| |    
T  20958985 attagggttaagagtgataa-ttgatgattagatgatggaaacttgtagaattgatgtagaaagtgtgtacaaaccttagataatccatagggtgatgtt 20958887  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  20958886 tagaatcagttttaa 20958872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 41373422 - 41373308
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  41373422 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 41373324  T
Q  115 tagggttaaaagtgat 130  Q
    |||||||| |||||||    
T  41373323 tagggttacaagtgat 41373308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 42106152 - 42106212
Alignment:
Q  268 tgattttgtgattcaatgtctgaacagtgcaattgcaaaacttgatttattgggagaagga 328  Q
    |||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42106152 tgatattgcgattcaatgtctcaacagtgcaattgcaaaacttgatttattgggagaagga 42106212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 16362868 - 16362743
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||  ||    
T  16362868 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttggaaat 16362770  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
     ||||||||||||||| | ||||||||    
T  16362769 aagggttaaaagtgattatttgatgat 16362743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 21042600 - 21042706
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||| |||||||||| |||||||| |||| || ||||| |||||||||| ||||| |||||||||| ||||||||||  ||||| |    
T  21042600 attagggttaagagtgat-aattgatgattagatgatgaaaaattgctgaattgatgtagaaagtgtgttcagaccttagataatccatagagtgatgtt 21042698  T
Q  213 tggaatca 220  Q
    | ||||||    
T  21042699 tagaatca 21042706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 21683849 - 21683742
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||| |||||| ||| ||||||||||||| ||| |||| |||||||||| ||| | || ||||||| ||||||||||| ||||| || |||    
T  21683849 ggttaaaagtgatcaattgaggattagatgatggaaaattgtagaattgatgtagaaagtgtttacaaaccttagataatccatagggtgatgtttagaa 21683750  T
Q  218 tcaatttt 225  Q
    ||| ||||    
T  21683749 tcagtttt 21683742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 22350768 - 22350658
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    |||||||||||||||||||||||||||||||  | ||||| ||| |||| |||||||||||||||  ||||||||| ||||||||  ||||||||| |||    
T  22350768 taaggtaagggtgggactaaccttcaataattctgagtatatgattctgaaaattgaatttaaca-agttgtaggttgtagttttgggaatttgggaatt 22350670  T
Q  116 agggttaaaagt 127  Q
    ||||||| ||||    
T  22350669 agggttagaagt 22350658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 48521463 - 48521255
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||||||||||||||||||| ||||||  |||||||  ||||| ||||| ||||  ||||||||| |||| ||||  ||||||| |||||| | | |||    
T  48521463 taaggtaagggtgggactaacattcaatcttcttaagcctgtgattctgataattagatttaacat-gttggaggt-ttagttttgagaattggagaatt 48521366  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgg 215  Q
    | |||||| |||||  |||||||||| |||||||| |||| ||||  ||  ||||||||| ||| | |||||||||| |||| |||||| ||||| || |    
T  48521365 a-ggttaagagtgaggaattgatgattagatgatgaaaaagtgttacatttatgtagaaagtgtttacagaccttagataattcatagggtgatgtttag 48521267  T
Q  216 aatcaattttaa 227  Q
    ||||||||||||    
T  48521266 aatcaattttaa 48521255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 22125155 - 22125042
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||  ||| |||| || ||||||| ||||| |||||||||| ||||||||||| ||||| |    
T  22125155 attagggttaagagtgataa-ttgaggattagatgatggaaacttgtagaatcgaggtagaaagtgtgtacagaccttagataatccatagggtgatgtt 22125057  T
Q  213 tggaatcaattttaa 227  Q
    |  ||||| ||||||    
T  22125056 taaaatcagttttaa 22125042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 192
Target Start/End: Complemental strand, 51477058 - 51476869
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-a 102  Q
    |||||||||| | |||||||||||||||||||||||| |||||| || ||||| ||| |||| ||||||||||||||| |||||| | | ||||||||      
T  51477058 cgatcgattaacctaaggtaagggtgggactaacctttaataattttgagtatatgattctgaaaattgaatttaaca-ggttgtggcttgtagttttgg 51476960  T
Q  103 gaatttggg-gattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttag 192  Q
    |||||||||  |||||||||| || |   || ||| |||| ||||||| |||| | |||||||  ||| |||||| ||||  |||||||||    
T  51476959 gaatttgggaaattagggttagaaattgcaatttgttgattagatgatagaaacccgttgaattaatgaagaaacagtgttaagaccttag 51476869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 47191570 - 47191345
Alignment:
Q  1 ttgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaa-attgaatttaacatggttgtaggtagtagtt 99  Q
    |||| |||||||| |  ||||||||||||||||||||| |||| |  |||||||  | ||| |||||  |||  |||||||||| ||||||| | |||||    
T  47191570 ttgctgatcgattttgttaaggtaagggtgggactaacattcagttttcttaagcctatgattctgatgattagatttaacatg-ttgtagg-attagtt 47191473  T
Q  100 ttaga-atttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatc 198  Q
    || || | ||||  || |||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||| ||| ||||| | |||||||| |||||    
T  47191472 ttggagaattggaaatcagggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtataaagtgtgtacggaccttagataatc 47191374  T
Q  199 cataggatgatgattggaatcaattttaa 227  Q
    |||||| ||||| || |||||| ||||||    
T  47191373 catagggtgatgtttagaatcagttttaa 47191345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 21841719 - 21841594
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||  | ||    
T  21841719 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttcagaat 21841621  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  21841620 tagggttaaaagtggttaattgatgat 21841594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 22777320 - 22777206
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccata-ggatgatga 211  Q
    ||||||||||| ||||| || |||| ||| |||||||| |||| ||| |||| |||||||||| ||| | |||||||||| ||||||||| || |||||     
T  22777320 attagggttaagagtgagaa-ttgaggattagatgatgaaaaattgtagaattgatgtagaaagtgtttacagaccttagataatccataggggtgatgt 22777222  T
Q  212 ttggaatcaattttaa 227  Q
    || |||||||||||||    
T  22777221 ttagaatcaattttaa 22777206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 27652495 - 27652581
Alignment:
Q  123 aaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    ||||||| ||||||||||| |  ||||| |||| ||||  || |||||||||||||||| |||||||||| ||||||||| ||||||    
T  27652495 aaagtgagaaattgatgattaattgatgaaaaattgttagattgatgtagaaactgtgtacagaccttagataatccatatgatgat 27652581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 21708201 - 21708118
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt 101  Q
    |||||||||||||||||||||||||||||||  | ||||||| | |||| |||||| ||||||||| |||||||||  |||||||    
T  21708201 taaggtaagggtgggactaaccttcaataattctgagtatgtaattctgaaaattggatttaacat-gttgtaggttatagtttt 21708118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 21712744 - 21712661
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt 101  Q
    |||||||||||||||||||||||||||||||  | ||||||| | |||| |||||| ||||||||| |||||||||  |||||||    
T  21712744 taaggtaagggtgggactaaccttcaataattctgagtatgtaattctgaaaattggatttaacat-gttgtaggttatagtttt 21712661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 48444443 - 48444360
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt 101  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||    
T  48444443 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttt 48444360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 22122168 - 22122280
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| |||||| || |||||||||  |||||||  |||||||| | |||    
T  22122168 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatat-gttgtaggt-ttagtttttgagaatttgagaatt 22122265  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  22122266 agggttaagagtgat 22122280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 41230941 - 41231053
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||| ||  |||||||  |||||||| | |||    
T  41230941 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaagt-ttagtttttgagaatttgagaatt 41231038  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  41231039 agggttaagagtgat 41231053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 46560130 - 46560056
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||    
T  46560130 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt 46560056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 52940122 - 52940235
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| ||||| ||||||| |  |||| |||||  ||||| |    
T  52940122 attagggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagacctcaaataattcatagtgtgatgtt 52940220  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  52940221 tagaatcagttttaa 52940235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 22050350 - 22050456
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| |||||| || |||||||||  |||||||  |||||||| | ||    
T  22050350 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatat-gttgtaggt-ttagtttttgagaatttgagaat 22050447  T
Q  115 tagggttaa 123  Q
    |||||||||    
T  22050448 tagggttaa 22050456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 9044518 - 9044631
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| | ||||||| |||||||||  |||||||  |||||||| | ||    
T  9044518 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtacttaacat-gttgtaggt-ttagtttttgagaatttgagaat 9044615  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  9044616 tagggttaagagtgat 9044631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 222
Target Start/End: Original strand, 16093105 - 16093224
Alignment:
Q  102 agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccat 201  Q
    |||||||| | |||||||||||| |||| ||||||||| | |  ||||| |||  ||||  || | |||||||||||||| ||||| |||| ||||||||    
T  16093105 agaatttgagaattagggttaaa-gtgagaaattgatggttaattgatgaaaatttgttagattggtgtagaaactgtgtacagacattagataatccat 16093203  T
Q  202 aggatgatgattggaatcaat 222  Q
    ||||||||   ||||||||||    
T  16093204 aggatgatatctggaatcaat 16093224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 16274573 - 16274686
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| | || |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  16274573 taaggtaagggtgagactaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 16274670  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  16274671 tagggttaagagtgat 16274686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 43543545 - 43543494
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa 69  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||||||    
T  43543545 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaa 43543494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 14792563 - 14792604
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  14792563 taaggtaagggtgggactaaccttctttaatcataagtatgt 14792604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 29299083 - 29299050
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatctt 51  Q
    ||||||||||||||||||||| ||||||||||||    
T  29299083 taaggtaagggtgggactaacattcaataatctt 29299050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 34770660 - 34770627
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatctt 51  Q
    ||||||||||||||||||||| ||||||||||||    
T  34770660 taaggtaagggtgggactaacattcaataatctt 34770627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 41225454 - 41225495
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  41225454 taaggtaagggtgggactaaccttctttaatcataagtatgt 41225495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 41226707 - 41226748
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  41226707 taaggtaagggtgggactaaccttctttaatcataagtatgt 41226748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 42314751 - 42314784
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatctt 51  Q
    ||||||||||||||||||||| ||||||||||||    
T  42314751 taaggtaagggtgggactaacattcaataatctt 42314784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 7320594 - 7320677
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt 101  Q
    ||||||||||||||||||||||| || ||||  ||||| | | | |||| ||||||||||||||| |||||||| | ||||||||    
T  7320594 taaggtaagggtgggactaacctacactaattctaagtgtattattctgaaaattgaatttaaca-ggttgtagattgtagtttt 7320677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 16381939 - 16381903
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccata 202  Q
    |||||||||||||||| |||||||||| |||||||||    
T  16381939 gatgtagaaactgtgtacagaccttagataatccata 16381903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 20959085 - 20959045
Alignment:
Q  14 atcgtaaggtaagggtgggactaaccttcaataatcttaag 54  Q
    ||||||||||||||||||||||||| ||||||  |||||||    
T  20959085 atcgtaaggtaagggtgggactaacattcaatcttcttaag 20959045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 41049322 - 41049362
Alignment:
Q  169 gtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    ||||||||||| | |||||||||| ||||||||||||||||    
T  41049322 gtagaaactgtttacagaccttagataatccataggatgat 41049362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 50613334 - 50613429
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||| |||||||||||||||| |  ||||| | || |||  ||| || ||||||| ||| | |||||||||| ||||||||| ||||||    
T  50613334 attagggttaaa-gtgataaattgatgattaattgatgtagaattgtataattgaggtagaaagtgtttacagaccttagataatccataagatgat 50613429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 50621162 - 50621257
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||| |||||||||||||||| |  ||||| | || |||  ||| || ||||||| ||| | |||||||||| ||||||||| ||||||    
T  50621162 attagggttaaa-gtgataaattgatgattaattgatgtagaattgtataattgaggtagaaagtgtttacagaccttagataatccataagatgat 50621257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 9159 - 8949
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| ||| | ||||  ||||| |||| ||||||||   | |||| |||||||||| |||    
T  9159 taaggtaagggtgggactaacattcaatcttcttaagcgtatgattctaataattccatttagcatg-ttgtaggtttaatttttgagaatttgggaatt 9061  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgg 215  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||  || | |||||||||| ||| |||||||||| |||||||||||||||| | | |    
T  9060 agggttaaaagtgatgaattgaggattagatgatggaaaactgttagattgttgtagaaactatgtacagaccttagataatccataggatgataacttg 8961  T
Q  216 aatcaattttaa 227  Q
    ||||| ||||||    
T  8960 aatcagttttaa 8949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 2003 - 1899
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttaga 104  Q
    |||||||||||  |||||||||||||||||||||||||||||||  | ||||||||| | ||||  |||||||||||||||||||||| |  ||||||||    
T  2003 cgatcgattatgctaaggtaagggtgggactaaccttcaataattctgagtatgtgattatgaagatgaatttaacatggttgtaggttgaggttttaga 1904  T
Q  105 atttg 109  Q
    |||||    
T  1903 atttg 1899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 75025 - 75233
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||||||||||||||||||| ||||||  ||||||| || | | ||| | ||||  |||||||||| ||||||||  ||||||| |||||||||  |||    
T  75025 taaggtaagggtgggactaacattcaatcttcttaagcatattattcttataattagatttaacatg-ttgtaggtt-tagttttgagaatttgga-att 75121  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgg 215  Q
    ||||||||||||| | |||||||||| |||||||| ||||||||||||| ||||||||||  |||| |||||||||| ||||||||| | ||||| || |    
T  75122 agggttaaaagtggtgaattgatgattagatgatgaaaaactgttgaattgatgtagaaaaagtgtacagaccttagataatccataaggtgatgtttag 75221  T
Q  216 aatcaattttaa 227  Q
    ||||| ||||||    
T  75222 aatcagttttaa 75233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 165701 - 165825
Alignment:
Q  102 agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccat 201  Q
    |||||||||| |||||| ||||||||||| |||||| ||| | ||||||||||  ||| |||| |||||||||||||||| |||||||||| ||||||||    
T  165701 agaatttgggaattagg-ttaaaagtgatcaattgaggattaaatgatggaaacttgtagaattgatgtagaaactgtgtacagaccttagataatccat 165799  T
Q  202 aggatgatgattggaatcaattttaa 227  Q
    ||| |||| |||||||||| ||||||    
T  165800 agggtgataattggaatcagttttaa 165825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 268538 - 268432
Alignment:
Q  102 agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccat 201  Q
    |||| |||| ||||||||||||| |||| ||||||| ||| |  ||||| | || ||||  || |||||||||||||||| |||||||||| ||||||||    
T  268538 agaagttggagattagggttaaa-gtgagaaattgaggattaattgatgtagaattgttagattgatgtagaaactgtgtacagaccttagataatccat 268440  T
Q  202 aggatgat 209  Q
    ||||||||    
T  268439 aggatgat 268432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 68362 - 68258
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttaga 104  Q
    |||||||||||| |||||||||||||||||||||||||||||||  | ||||||||| ||||||  |||||||||||||| ||||||| |  ||||||||    
T  68362 cgatcgattatcttaaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaagatgaatttaacatggctgtaggttgaggttttaga 68263  T
Q  105 atttg 109  Q
    |||||    
T  68262 atttg 68258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 22228 - 22137
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    ||||||||||||| |||||||||||||||||  | ||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||    
T  22228 taaggtaagggtgagactaaccttcaataattctgagtatgtgattctgaaattgaatttaacatggttgtaggttaaagttttagaatttg 22137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 10152 - 10103
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga 67  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| |||||    
T  10152 taaggtaagggtgagactaaccttcaataattttgagtatgtgattctga 10103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 220427 - 220540
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||||||| |||||||| ||||||||||||| |||||||||| ||| | |||||||||| ||||||||||| ||||| |    
T  220427 attagggttaagagtgataa-ttgatgattagatgatgtaaaactgttgaattgatgtagaaagtgtatacagaccttagataatccatagggtgatgtt 220525  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  220526 tagaatcagttttaa 220540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 2014 - 1905
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    |||||||||||||||||||||||| ||||||||||||  ||| |||| |||||||||||||||| |||||||||| | || |||||| |||||||| |||    
T  2014 ggttaaaagtgataaattgatgattagatgatggaaacttgtagaattgatgtagaaactgtgtacagaccttagatgattcataggttgatgattagaa 1915  T
Q  218 tcaattttaa 227  Q
    | | ||||||    
T  1914 ttagttttaa 1905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 5549 - 5430
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-- 101  Q
    |||||| | ||| |||||||||||||||| |||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||      
T  5549 cgatcgttaatcttaaggtaagggtgggaataacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttg 5452  T
Q  102 agaatttggggattagggttaa 123  Q
    |||||||| | |||||||||||    
T  5451 agaatttgagaattagggttaa 5430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 21699 - 21574
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  21699 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgagaat 21601  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  21600 tagggttaaaagtgattaattgatgat 21574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 19221 - 19116
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||  ||||||||| |||||||||  |||||||  |||||||||| ||    
T  19221 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattagatttaacat-gttgtaggttttagtttttgagaatttgggaat 19123  T
Q  115 tagggtt 121  Q
    |||||||    
T  19122 tagggtt 19116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 5349 - 5258
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||  |||||||||||||||||||||| |  |||||||||||||    
T  5349 taaggtaagggtgggactaaccttcaataattatgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaatttg 5258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 12369 - 12278
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    |||||||||||||||||||||||||||||||  | ||||||||| ||||||  |||||||||||||||||||||| |  |||||||||||||    
T  12369 taaggtaagggtgggactaaccttcaataattatgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaatttg 12278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 38770 - 38645
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  38770 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 38672  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  38671 tagggttaaaagtgattatttgatgat 38645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 56; Significance: 4e-23; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 135161 - 135036
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||  || | ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||||| ||    
T  135161 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatg-ttgtaggttttagtttttgagaatttgggaat 135063  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  135062 tagggttaaaagtgattaattgatgat 135036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 137630 - 137505
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||  || | ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||||| ||    
T  137630 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatg-ttgtaggttttagtttttgagaatttgggaat 137532  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  137531 tagggttaaaagtgattaattgatgat 137505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 140099 - 139974
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||  || | ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||||| ||    
T  140099 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatg-ttgtaggttttagtttttgagaatttgggaat 140001  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  140000 tagggttaaaagtgattaattgatgat 139974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 142568 - 142443
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||  || | ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||||| ||    
T  142568 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatg-ttgtaggttttagtttttgagaatttgggaat 142470  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  142469 tagggttaaaagtgattaattgatgat 142443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 145037 - 144912
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||  || | ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||||| ||    
T  145037 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatg-ttgtaggttttagtttttgagaatttgggaat 144939  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| ||||||||||    
T  144938 tagggttaaaagtgattaattgatgat 144912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 3053 - 3227
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatta 116  Q
    ||||||||||||||||||||||||||||||  ||||| | | | |||| |||||||||||||||  ||||||||| ||||||||  |||||| || ||||    
T  3053 aaggtaagggtgggactaaccttcaataattctaagtgtattattctgaaaattgaatttaaca-agttgtaggttgtagttttgggaatttaggaatta 3151  T
Q  117 gggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttag 192  Q
    |||||| ||||  ||| | | |||| | ||| | |||| ||||||||| |||||||||||||||| || |||||||    
T  3152 gggttagaagttgtaattggttgattaaatggtagaaatctgttgaattgatgtagaaactgtgtacaaaccttag 3227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 95359 - 95234
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  95359 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 95261  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  95260 tagggttaaaagtgattatttgatgat 95234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 16744 - 16873
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagttt 100  Q
    ||||||||| | ||| ||||||||||||| ||||||| |||||||||||| ||| | ||| |||  |||||| ||||||||| ||||||||| | |||||    
T  16744 tgccgatcgttgatcttaaggtaagggtgagactaacattcaataatcttgagtctatgattctaaaaattgtatttaacat-gttgtaggttg-agttt 16841  T
Q  101 t--agaatttggggattagggttaaaagtgat 130  Q
    |  |||||||| | ||||||||||| ||||||    
T  16842 ttgagaatttgagaattagggttaagagtgat 16873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 55; Significance: 1e-22; HSPs: 6)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 23075 - 22961
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    |||||||||||||||||  |||||| ||| |||| | |||||||||||  || |||||||||| ||||| |||||||||| ||||||||| |||||| ||    
T  23075 attagggttaaaagtgaagaattgaggattagataacggaaaactgttagattgatgtagaaattgtgtacagaccttagataatccatatgatgatcat 22976  T
Q  213 tggaatcaattttaa 227  Q
    |||||||| ||||||    
T  22975 tggaatcagttttaa 22961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 14212 - 14113
Alignment:
Q  120 ttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatc 219  Q
    ||||||||||  |||||| ||| |||| | |||||||||||  || |||||||||||||||| |||||||||| |||||||||||||||| |||||||||    
T  14212 ttaaaagtgaagaattgaggattagataacggaaaactgttagattgatgtagaaactgtgtacagaccttagataatccataggatgatcattggaatc 14113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 13033 - 13158
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||  ||    
T  13033 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttggaaat 13131  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||| ||||||||||| | ||||||||    
T  13132 taggattaaaagtgattatttgatgat 13158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 20686 - 20573
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  20686 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 20589  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  20588 tagggttaagagtgat 20573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 43570 - 43467
Alignment:
Q  28 gtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggattagggttaaa 124  Q
    ||||||||||| |||||||||||||||||| ||| |||| |||||| |||||| || |||||||||  |||||||  |||||||| | |||||||||||     
T  43570 gtgggactaacattcaataatcttaagtatatgattctgaaaattgtatttaatat-gttgtaggt-ttagtttttgagaatttgagaattagggttaag 43473  T
Q  125 agtgat 130  Q
    ||||||    
T  43472 agtgat 43467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 102936 - 102979
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||||| | |||||||||| ||||||||||||||||    
T  102936 gatgtagaaactgtttacagaccttagataatccataggatgat 102979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 225
Target Start/End: Complemental strand, 913 - 802
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    |||||||||||| ||||  |||||||||| |  ||||| |||||||| ||||  ||||||||||| ||| |||||||||| |||||||||||||||| ||    
T  913 attagggttaaa-gtgaagaattgatgattaattgatgaaaaactgtagaatttatgtagaaactttgtacagaccttagataatccataggatgattat 815  T
Q  213 tggaatcaatttt 225  Q
    |||||||||||||    
T  814 tggaatcaatttt 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 2918 - 3041
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||  |||||||||| |||||||  |||||||||| ||    
T  2918 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaaca--gttgtaggta-tagtttttgagaatttgggaat 3014  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  3015 tagggttaaaagtgattatttgatgat 3041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 13686 - 13598
Alignment:
Q  21 ggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    ||||||||||||| ||||||||||||||  ||||||||||| ||||||  |||||||||||||||||||||| |  |||||||||||||    
T  13686 ggtaagggtgggagtaaccttcaataattctaagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttagaatttg 13598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 7981 - 7860
Alignment:
Q  22 gtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt--agaatttggggattagg 118  Q
    ||||||||||||||||| |||||||||||||||| | ||| |||  |||||| ||||||||| |||||||||  |||||||  |||||||||| |||| |    
T  7981 gtaagggtgggactaacattcaataatcttaagtctatgattctaaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaattaag 7883  T
Q  119 gttaaaagtgataaattgatgat 141  Q
    |||||||||||| ||||||||||    
T  7882 gttaaaagtgattaattgatgat 7860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 52; Significance: 9e-21; HSPs: 3)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 14898 - 14773
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  14898 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 14800  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    || ||||||||||| | ||||||||||    
T  14799 taaggttaaaagtggttaattgatgat 14773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 22700 - 22813
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| ||||||||| | ||||||  |||||||| | ||    
T  22700 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggttg-agtttttgagaatttgagaat 22797  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  22798 tagggttaagagtgat 22813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 20527 - 20598
Alignment:
Q  21 ggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    |||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||    
T  20527 ggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt 20598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 5326 - 5447
Alignment:
Q  22 gtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt--agaatttggggattagg 118  Q
    ||||||||||||||||| |||||||||||||||| | ||| |||  |||||| ||||||||| |||||||||  |||||||  |||||||||| |||| |    
T  5326 gtaagggtgggactaacattcaataatcttaagtctatgattctaaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaattaag 5424  T
Q  119 gttaaaagtgataaattgatgat 141  Q
    |||||||||||| ||||||||||    
T  5425 gttaaaagtgattaattgatgat 5447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 19 - 144
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||  |||||||||||||||| | ||| ||| ||| ||| |||||||||| ||||||||  |||||||  |||||||||| ||    
T  19 taaggtaagggtgagactaatattcaataatcttaagtctatgattctaaaaattggatttaacatg-ttgtaggttttagtttttgagaatttgggaat 117  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
     ||||||||||||||| ||||||||||    
T  118 gagggttaaaagtgattaattgatgat 144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 38952 - 39077
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtag--ttttagaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||  |||||||||||| | ||    
T  38952 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagttttttagaatttgagaat 39050  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  39051 tagggttaaaagtgattatttgatgat 39077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 227
Target Start/End: Complemental strand, 209913 - 209711
Alignment:
Q  17 gtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggatta 116  Q
    |||||||||||||||||||| | |||| | ||||||||| | | | |||||||||| ||||||||||    ||   ||| ||| | || |||| | ||||    
T  209913 gtaaggtaagggtgggactatcattcagtgatcttaagtctataattctgaaattggatttaacatg----ta---agttgttcttga-tttgagaatta 209822  T
Q  117 gggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgga 216  Q
    |||||||||||||| | ||| |||| |||||||| |||  ||||||||  ||||| ||| ||||| |||||||||| |||| ||||||||||||||| ||    
T  209821 gggttaaaagtgatgatttggtgattagatgatgaaaacgtgttgaattaatgtaaaaattgtgtacagaccttagataatgcataggatgatgatttga 209722  T
Q  217 atcaattttaa 227  Q
    ||||| |||||    
T  209721 atcaaatttaa 209711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 9e-21; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 29346929 - 29346804
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||||| ||    
T  29346929 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgggaat 29346831  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  29346830 tagggttaaaagtggttaattgatgat 29346804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 29349402 - 29349277
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||||| ||    
T  29349402 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgggaat 29349304  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  29349303 tagggttaaaagtggttaattgatgat 29349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 29351875 - 29351750
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||||| ||    
T  29351875 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgggaat 29351777  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  29351776 tagggttaaaagtggttaattgatgat 29351750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 39246084 - 39245959
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  39246084 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 39245986  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||| ||||||||| | ||||||||    
T  39245985 tagggtcaaaagtgattatttgatgat 39245959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 19616477 - 19616549
Alignment:
Q  53 agtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggattagggttaaaa 125  Q
    ||||||||| ||||||||||||||||||||||||||| || | |||||||||||||| | |||||||||||||    
T  19616477 agtatgtgattctgaaattgaatttaacatggttgtaagttgaagttttagaatttgagaattagggttaaaa 19616549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 26832670 - 26832599
Alignment:
Q  21 ggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||| ||||||||||||||  ||||||||||| ||||||  ||||||||||||||||||||||    
T  26832670 ggtaagggtgggagtaaccttcaataattctaagtatgtgattctgaagatgaatttaacatggttgtaggt 26832599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 38620384 - 38620259
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  38620384 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgagaat 38620286  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  38620285 tagggttaaaagtgattatttgatgat 38620259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 39364332 - 39364207
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||| |||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||  ||    
T  39364332 taaggtaagggtgggactaacattcaataaccttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttggaaat 39364234  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  39364233 tagggttaaaagtgattatttgatgat 39364207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 21327507 - 21327620
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||| ||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| ||||| |||||||||| ||||||||||| ||||| |    
T  21327507 attagagttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtccagaccttagataatccatagggtgatgtt 21327605  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  21327606 tagaatcagttttaa 21327620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 20909963 - 20909837
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt---agaatttgggga 113  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||   |||||||| | |    
T  20909963 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgttttttgagaatttgagaa 20909865  T
Q  114 ttagggttaaaagtgataaattgatgat 141  Q
    ||||||||||||||| | ||||||||||    
T  20909864 ttagggttaaaagtggttaattgatgat 20909837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 26739797 - 26740005
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaa-attgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||||||||||| ||||||| ||||||  |||||||| ||| | |||||  ||| ||||||||| | ||||||||  ||||||| |||||| |   |||    
T  26739797 taaggtaagggtgagactaacattcaattctcttaagtctgtaattctgatgattaaatttaacaag-ttgtaggtt-tagttttgagaattggaaaatt 26739894  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgg 215  Q
    |||||||| ||||| || ||||||   |||||||| | || || |||||||||||||||| ||| | |||||||||| ||||||||||| ||||| || |    
T  26739895 agggttaagagtgagaa-ttgatggatagatgatgtataattgctgaatggatgtagaaagtgtatacagaccttagataatccatagggtgatgtttag 26739993  T
Q  216 aatcaattttaa 227  Q
    ||||| ||||||    
T  26739994 aatcagttttaa 26740005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 42244576 - 42244701
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| |||||| || |||||||||  | |||||  |||||||| | ||    
T  42244576 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaatat-gttgtaggttttcgtttttgagaatttgagaat 42244674  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  42244675 tagggttaaaagtggttaattgatgat 42244701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 25573691 - 25573785
Alignment:
Q  133 attgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    ||||| ||| ||||||||||||  ||| |||| |||||||||| ||||| |||||||||| ||||||||||| ||||| || |||||| ||||||    
T  25573691 attgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatccatagggtgatgtttagaatcagttttaa 25573785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 25574926 - 25575020
Alignment:
Q  133 attgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    ||||| ||| ||||||||||||  ||| |||| |||||||||| ||||| |||||||||| ||||||||||| ||||| || |||||| ||||||    
T  25574926 attgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatccatagggtgatgtttagaatcagttttaa 25575020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 25576119 - 25576213
Alignment:
Q  133 attgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    ||||| ||| ||||||||||||  ||| |||| |||||||||| ||||| |||||||||| ||||||||||| ||||| || |||||| ||||||    
T  25576119 attgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatccatagggtgatgtttagaatcagttttaa 25576213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 2153952 - 2154065
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  2153952 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 2154049  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  2154050 tagggttaagagtgat 2154065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 21914476 - 21914556
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaaca 81  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||  | ||||||| | |||| |||||| ||||||||    
T  21914476 tgccgatcgattaacctaaggtaagggtgggactaaccttcaataattctgagtatgtaattctgaaaattggatttaaca 21914556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 23065464 - 23065350
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||| ||||  ||    
T  23065464 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaaattggaaat 23065366  T
Q  115 tagggttaaaagtgat 130  Q
    |||||||| |||||||    
T  23065365 tagggttacaagtgat 23065350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 263982 - 264107
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  | |||||| | ||    
T  263982 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgaaaatttgagaat 264080  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  264081 tagggttaaaagtgcttaattgatgat 264107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 21405615 - 21405776
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-a 102  Q
    |||||||||| | ||||||||||||| |||||||||| ||||||  | ||||| ||| |||| ||||||||||||||| |||||| ||| ||||||||      
T  21405615 cgatcgattaacctaaggtaagggtgagactaacctttaataattctgagtatatgattctgaaaattgaatttaaca-ggttgtgggttgtagttttgg 21405713  T
Q  103 gaatttggg-gattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaat 164  Q
    |||||||||  |||||||||| ||||  ||| | | |||| ||||||| |||| | |||||||    
T  21405714 gaatttgggaaattagggttagaagttgtaattggttgattagatgatagaaacccgttgaat 21405776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 17516290 - 17516403
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  || ||||  |||||||| | ||    
T  17516290 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttattttttgagaatttgagaat 17516387  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  17516388 tagggttaagagtgat 17516403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 24473916 - 24473803
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  24473916 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 24473819  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  24473818 tagggttaagagtgat 24473803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 29330815 - 29330702
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  29330815 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 29330718  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||| | ||||||    
T  29330717 tagggttcagagtgat 29330702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 20917168 - 20917280
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| |||||| || |||||||||  |||||||  |||||||| | |||    
T  20917168 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatat-gttgtaggt-ttagtttttgagaatttgagaatt 20917265  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  20917266 agggttaagagtgat 20917280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 22177445 - 22177536
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||| ||||||| ||||||||||| |  ||||| | || ||||  || |||||||||||||| | |||||||||| ||||||||||||||||    
T  22177445 ggtttaaagtgagaaattgatgattaattgatgtagaattgttagattgatgtagaaactgtttacagaccttagataatccataggatgat 22177536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 23470648 - 23470558
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatagg 204  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||  ||| ||||  ||||||||| ||||| || ||||||| |||||||||||    
T  23470648 attagggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattaatgtagaaagtgtgtacaaaccttagataatccatagg 23470558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 10774664 - 10774730
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatg 83  Q
    |||||||||||||||||||||||||| ||||  ||||| | ||| |||| |||||||||||||||||    
T  10774664 taaggtaagggtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaacatg 10774730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 26732079 - 26732192
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| ||||| || ||||||   |||||||| |||| || ||||| |||||||||| ||| | |||||||||| ||||||||||| ||||| |    
T  26732079 attagggttaagagtgagaa-ttgatggatagatgatgtaaaattgctgaatagatgtagaaagtgtatacagaccttagataatccatagggtgatgtt 26732177  T
Q  213 tggaatcaattttaa 227  Q
    |  ||||| ||||||    
T  26732178 taaaatcagttttaa 26732192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 21740893 - 21740954
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    |||||||||||||| | |||||||||||||||||||||| |||| |  ||||||| ||||||    
T  21740893 gatgtagaaactgtttacagaccttaggtaatccatagggtgattacaggaatcagttttaa 21740954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 40726732 - 40726667
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatg 83  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| |||||||||| ||||||||||    
T  40726732 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaaattggatttaacatg 40726667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 20901326 - 20901382
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaa 74  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| ||||||| ||||    
T  20901326 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaagtgaa 20901382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 41860565 - 41860738
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagttt 100  Q
    |||| |||||||| | ||||||||||||||||||||| ||||||  |||||||  | ||| | ||| ||||  |||||| || |||||||||  ||||||    
T  41860565 tgccaatcgattaacctaaggtaagggtgggactaacattcaatcttcttaagcctatgattttgataattagatttaa-at-gttgtaggttatagttt 41860662  T
Q  101 t--agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaa 174  Q
    |  |||||||| | |||||| ||| ||||  ||||||| |||| ||||||| |||| |||||| || |||||||||    
T  41860663 ttgagaatttgagaattaggattagaagttgtaaattgttgataagatgatagaaacctgttggattgatgtagaa 41860738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 23476359 - 23476269
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatagg 204  Q
    ||||||||||| |||||||| |||| ||| ||||| ||||||  ||| |||| ||||||  || ||||| |||||||||| |||||||||||    
T  23476359 attagggttaagagtgataa-ttgaggattagatgctggaaacttgtagaattgatgtatgaagtgtgtacagaccttagataatccatagg 23476269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 31251892 - 31252006
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttta-gaatttggggatta 116  Q
    ||||||||||||| ||||| | |||| | ||||||||| | | | |||||||||| |||||||| |||| ||||| ||||||||| ||||||| | ||||    
T  31251892 taaggtaagggtgagactatcattcagtgatcttaagtctataattctgaaattggatttaaca-ggttataggttgtagttttaggaatttgagaatta 31251990  T
Q  117 gggttaaaagtgataa 132  Q
    || ||| |||| ||||    
T  31251991 ggtttagaagttataa 31252006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 26762467 - 26762413
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    |||||||||| | |||||||||||||||||||||||||  ||||| ||| |||||    
T  26762467 cgatcgattaacctaaggtaagggtgggactaaccttctttaatcataattatgt 26762413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 27988251 - 27988293
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatga 208  Q
    |||||||||||||||| |||||| ||| |||||||||||||||    
T  27988251 gatgtagaaactgtgtacagaccctagataatccataggatga 27988293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 14025807 - 14025848
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  14025807 taaggtaagggtgggactaaccttctttaatcataagtatgt 14025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 21554303 - 21554374
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtag 90  Q
    |||||||||||||||||||||||||| ||||  | |||| || | ||||||| || |||||||| ||||||||    
T  21554303 taaggtaagggtgggactaaccttcagtaattctgagtacgtaattctgaaactggatttaaca-ggttgtag 21554374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 158733 - 158621
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  158733 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgggaat 158635  T
Q  115 tagggttaaaagtg 128  Q
    ||||||||||||||    
T  158634 tagggttaaaagtg 158621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 30122 - 29986
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgact-ctgaaa-ttgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    |||||||||||||||||||||||||||||   ||||| | | | | |||||| ||| |||||||||| ||||||||  ||||||| || ||||||| |||    
T  30122 aaggtaagggtgggactaaccttcaataaatctaagtgttttaattctgaaaattgtatttaacatg-ttgtaggtt-tagttttgaggatttgggaatt 30025  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaa 154  Q
    || |||||||||||||||||| |||| | ||||| ||||    
T  30024 agagttaaaagtgataaattgttgattatatgattgaaa 29986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 22014 - 21901
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| | || |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  22014 taaggtaagggtgagactaacattcaataatcttgagtctatgattgtgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 21917  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  21916 tagggttaacagtgat 21901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 17320 - 17543
Alignment:
Q  2 tgccgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagttt 100  Q
    |||||||||||| || |||||||||| |||||||||| |||| |  ||||||| || ||| ||||| ||||  |||||||||  ||||||||  ||||||    
T  17320 tgccgatcgattttc-taaggtaaggttgggactaacattcagtcttcttaagcatatgattctgataattagatttaacatt-ttgtaggtt-tagttt 17416  T
Q  101 t--agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatc 198  Q
    |  ||||||||   ||||| ||||| ||| |||| |||||||| ||||||||  |||||| ||||| |||||||||| ||||| |||||||||| |||||    
T  17417 ttgagaatttgaa-attagtgttaagagtaataa-ttgatgattagatgatgagaaactgctgaattgatgtagaaagtgtgtacagaccttagataatc 17514  T
Q  199 cataggatgatgattggaatcaattttaa 227  Q
    |||||| ||||| || |||||| ||||||    
T  17515 catagggtgatgtttagaatcagttttaa 17543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 203640 - 203749
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    |||||||| ||||||||||| ||| ||||||||||||| ||| |||| | |||||||| ||| | |||||||||| ||||||||||| ||||| || |||    
T  203640 ggttaaaactgataaattgaggattagatgatggaaaattgtagaattggtgtagaaagtgtttacagaccttagataatccatagggtgatgtttagaa 203739  T
Q  218 tcaattttaa 227  Q
    ||| ||||||    
T  203740 tcagttttaa 203749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 191798 - 191986
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| ||||| ||||  |||||||||| ||||||||  |||||||  ||||||||   ||    
T  191798 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatg-ttgtaggtt-tagtttttgagaatttgaa-at 191894  T
Q  115 tagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatg 207  Q
    ||||||||| |||||| |||||||| | |||||||| ||||||| ||||| |||||||||| ||||| || ||||||| ||||||||| ||||    
T  191895 tagggttaagagtgat-aattgatgcttagatgatgaaaaactgctgaattgatgtagaaagtgtgtacaaaccttagataatccatatgatg 191986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 11954 - 11850
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttaga 104  Q
    |||||||||| | |||| |||||||| ||||||||| |||||||  | ||||||||| ||||||  |||||||||||||||||||||| |  ||||||||    
T  11954 cgatcgattaacctaagataagggtgagactaacctccaataattatgagtatgtgattctgaagatgaatttaacatggttgtaggttgaggttttaga 11855  T
Q  105 atttg 109  Q
    |||||    
T  11854 atttg 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 23038 - 22912
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatc-ttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt--agaatttgggga 113  Q
    ||||||||||||||||||||| |||||||||| |||||| | ||| |||  |||||| ||||||||| |||||||||  |||||||  |||||||||| |    
T  23038 taaggtaagggtgggactaacattcaataatctttaagtctatgattctaaaaattggatttaacat-gttgtaggttatagtttttgagaatttgggaa 22940  T
Q  114 ttagggttaaaagtgataaattgatgat 141  Q
    ||||||||||||||||| | ||||||||    
T  22939 ttagggttaaaagtgattatttgatgat 22912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 12446 - 12363
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagtttt 101  Q
    ||||||||||||| ||||| | ||||||  |||||||| | ||| |||||||||||||||||||||||||||||| ||||||||    
T  12446 taaggtaagggtgagactagcattcaatcttcttaagtctatgattctgaaattgaatttaacatggttgtaggttgtagtttt 12363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 12238 - 12113
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||| | ||    
T  12238 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgagaat 12140  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  12139 tagggttaaaagtgattatttgatgat 12113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1835 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold1835
Description:

Target: scaffold1835; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 164 - 51
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| ||||| ||||| |||| ||||||||||| ||||| |    
T  164 attagggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagactttagataatccatagggtgatgtt 66  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  65 tagaatcagttttaa 51  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 31730 - 31843
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| || ||||| |||||||| |||||||  ||||||||||||| ||| |||||| ||||| || ||||||| ||||||||||| ||||| |    
T  31730 attagggttaagagggataa-ttgatgattagatgataaaaaactgttgaattgatatagaaagtgtgtacaaaccttagataatccatagggtgatgtt 31828  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  31829 tagaatcagttttaa 31843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 57742 - 57640
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||| |||||| ||| ||||||||||||  |||  |||  ||||||||| ||||| |||||||||| ||||||||||| |||| |||||||    
T  57742 ggttaaaagtgatcaattgaggattagatgatggaaacttgtataattaatgtagaaattgtgtacagaccttagataatccatagggtgataattggaa 57643  T
Q  218 tca 220  Q
    |||    
T  57642 tca 57640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 16181 - 16294
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||  ||||||||||||  ||| |||| |||||||||| ||||| |||||||||| ||||||||||| ||||| |    
T  16181 attagggttaagagtgataa-ttgaggactagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatccatagggtgatgtt 16279  T
Q  213 tggaatcaattttaa 227  Q
    | ||||||| |||||    
T  16280 tagaatcaactttaa 16294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 25368 - 25481
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||| ||||||| ||||  ||| |||| |||||||||| ||||| || ||||||| ||||||||||| ||||| |    
T  25368 attagggttaagagtgataa-ttgaggattagatgatagaaacttgtagaattgatgtagaaagtgtgtacataccttagataatccatagggtgatgtt 25466  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  25467 tagaatcagttttaa 25481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 56220 - 56332
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||  || | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||||| ||    
T  56220 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacat-gttgtaggttttagtttttgagaatttgggaat 56318  T
Q  115 tagggttaaaagtg 128  Q
    ||||||||||||||    
T  56319 tagggttaaaagtg 56332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 9753 - 9644
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    |||| |||||||| |||||| ||| ||||||||||||  ||| |||| |||||||||| ||| | |||||||||| ||||||||||||||||  || |||    
T  9753 ggtttaaagtgatcaattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtttacagaccttagataatccataggatgatttttagaa 9654  T
Q  218 tcaattttaa 227  Q
    ||| ||||||    
T  9653 tcagttttaa 9644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 8694 - 8518
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggg-gat 114  Q
    |||||||||||||||||||||||||| ||||  ||||| | ||| |||| ||||||||||||||| |||||||||| ||||||||  |||||||||  ||    
T  8694 taaggtaagggtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaaca-ggttgtaggttgtagttttgggaatttgggaaat 8596  T
Q  115 tagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttag 192  Q
    |||||||| ||||  ||| | | ||||   ||  | |||| ||||||||| ||||||||||| |||| ||||||||||    
T  8595 tagggttagaagttgtaattggttgatttaatagtagaaatctgttgaattgatgtagaaacggtgttcagaccttag 8518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 9111 - 9008
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtag-ttttagaatttggggatta 116  Q
    |||||||||||||||||||||||||| ||||  | ||||||| | ||||||| || |||||||| |||||||||| |||| |||| ||||||||| ||||    
T  9111 taaggtaagggtgggactaaccttcagtaattctgagtatgtaattctgaaactggatttaaca-ggttgtaggttgtagtttttggaatttgggaatta 9013  T
Q  117 gggtt 121  Q
    |||||    
T  9012 gggtt 9008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 227
Target Start/End: Complemental strand, 11004 - 10893
Alignment:
Q  115 tagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattg 214  Q
    ||||||||| |||||||| |||| ||| ||||||||||||  | | |||| ||||||| || ||||| |||||||||| ||||||||||| ||||| ||     
T  11004 tagggttaagagtgataa-ttgaggattagatgatggaaacttatagaattgatgtaggaagtgtgtacagaccttagataatccatagggtgatgttta 10906  T
Q  215 gaatcaattttaa 227  Q
    |||||||||||||    
T  10905 gaatcaattttaa 10893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 6893 - 6768
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||||||   | | |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  6893 taaggtaagggtgagactaacattcaataatcttaagtcattaattctgaaaattggatttaacat-gttgtaggttttagtttttgagaatttgagaat 6795  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||||| | ||||||||    
T  6794 tagggttaaaagtgattatttgatgat 6768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 14342 - 14217
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||  |||||| ||||||||| |||||||||  | |||||  |||||||| | ||    
T  14342 taaggtaagggtgggactaacattcaataatcttaagtcattgattctcaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgagaat 14244  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  14243 tagggttaaaagtggttaattgatgat 14217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 11400 - 11523
Alignment:
Q  104 aatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatag 203  Q
    |||||| | |||||||| ||| ||||||| ||| |||| ||||| || |||  ||||||||  ||||||||||||||| |||| ||||| ||||  ||||    
T  11400 aatttgagaattagggtaaaaggtgataatttggtgattagatggtgaaaacgtgttgaattaatgtagaaactgtgtacagatcttagataatgtatag 11499  T
Q  204 gatgatgattggaatcaattttaa 227  Q
    |||||||||| |||||| ||||||    
T  11500 gatgatgattagaatcagttttaa 11523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 15800 - 15923
Alignment:
Q  104 aatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatag 203  Q
    |||||| | |||||||| ||| ||||||| ||| |||| ||||| || |||  ||||||||  ||||||||||||||| |||| ||||| ||||  ||||    
T  15800 aatttgagaattagggtaaaaggtgataatttggtgattagatggtgaaaacgtgttgaattaatgtagaaactgtgtacagatcttagataatgtatag 15899  T
Q  204 gatgatgattggaatcaattttaa 227  Q
    |||||||||| |||||| ||||||    
T  15900 gatgatgattagaatcagttttaa 15923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 41348 - 41223
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||||| ||    
T  41348 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgggaat 41250  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    || ||||||||||| | |||| |||||    
T  41249 taaggttaaaagtggttaattaatgat 41223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 46 - 135
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatag 203  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| ||||| |||||||||| ||||||||||    
T  46 attagggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacagaccttagataatccatag 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 486 - 373
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||| ||||| ||||||  ||| |||| |||||||||| ||||| || ||||||| ||||||||||| ||||| |    
T  486 attagggttaagagtgataa-ttgaggattagatggtggaaacttgtggaattgatgtagaaagtgtgtacataccttagataatccatagggtgatgtt 388  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  387 tagaatcagttttaa 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 1514 - 1401
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||  ||| |||| ||||| |||| ||||| |||||||||  ||||||||||| ||||| |    
T  1514 attagggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtggaaagtgtgtacagaccttatataatccatagggtgatgtt 1416  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  1415 tagaatcagttttaa 1401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 7260 - 7053
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaa-attgaatttaacatggttgtaggtagtagttttaga-atttggggatta 116  Q
    |||||||||||||||||||| ||||||  |||||||  | ||| |||||  |||  |||||||||| ||||||||  ||||||  || ||||||  ||||    
T  7260 aaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattatatttaacatg-ttgtaggtt-tagtttgtgagatttggaaatta 7163  T
Q  117 gggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattgga 216  Q
    ||||||| |||||||| |||| ||  |||||||| |||  ||| |||| ||||| |||| ||||| |||||||||| ||||||||||| ||||| || ||    
T  7162 gggttaagagtgataa-ttgaggactagatgatgaaaacttgtagaattgatgtggaaagtgtgtacagaccttagataatccatagggtgatgtttaga 7064  T
Q  217 atcaattttaa 227  Q
    |||| ||||||    
T  7063 atcagttttaa 7053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 333193 - 333080
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    |||||||||||| ||||| |||||| ||| ||||||||||||  ||| |||| |||||||||| ||| |  ||||||||| ||||||||||| ||||| |    
T  333193 attagggttaaa-gtgatcaattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtttatagaccttagataatccatagggtgatgtt 333095  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  333094 tagaatcagttttaa 333080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 227
Target Start/End: Original strand, 204397 - 204557
Alignment:
Q  63 tctgaaattgaatttaacatggttgtaggtagtagttttagaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttga 162  Q
    ||||||||||| |||||||||||| ||||| | ||||| |||| ||||  ||||||||||||||| |||| |||||||| |||| |||||||  ||| ||    
T  204397 tctgaaattga-tttaacatggtt-taggttgaagttt-agaagttgga-attagggttaaaagttataatttgatgattagataatggaaacatgtaga 204492  T
Q  163 atggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    || | || | |||  |||| |||||||||| | || ||| |||||||| || |||||| ||||||    
T  204493 attggtgcaaaaatggtgtacagaccttagatgattcatgggatgatgtttagaatcagttttaa 204557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 2599 - 2490
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||| |||| ||||| ||||||||||||  ||  |||| |||||||||| ||| | |||||| ||| ||||||||||| ||||| || |||    
T  2599 ggttaaaagtgatcaattcatgattagatgatggaaatttggagaattgatgtagaaagtgtatacagaccatagataatccatagggtgatgtttagaa 2500  T
Q  218 tcaattttaa 227  Q
    ||| ||||||    
T  2499 tcagttttaa 2490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 7293 - 7179
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  7293 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 7196  T
Q  115 tagggttaaaagtgata 131  Q
    ||||||||| |||||||    
T  7195 tagggttaagagtgata 7179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 37381 - 37490
Alignment:
Q  118 ggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaa 217  Q
    ||||||||||||| |||||| ||| ||||||||||||  ||| |||| |||||||||| ||| | ||||| |||| ||||||||||  ||||| || |||    
T  37381 ggttaaaagtgattaattgaggattagatgatggaaacttgtagaattgatgtagaaagtgtatacagacattagataatccatagagtgatgtttagaa 37480  T
Q  218 tcaattttaa 227  Q
    ||| ||||||    
T  37481 tcagttttaa 37490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 1200 - 1087
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| ||||||||| | ||||||  |||||||| | ||    
T  1200 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggttg-agtttttgagaatttgagaat 1103  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  1102 tagggttaagagtgat 1087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 6897 - 7010
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  6897 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 6994  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  6995 tagggttaagagtgat 7010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 36 - 149
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||| |||| |||||| ||||||||| |||||||||  |||||||  | |||||| | ||    
T  36 taaggtaagggtgggactaacattcaataatcttgagtctgtgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgaaaatttgagaat 133  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  134 tagggttaagagtgat 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 5564 - 5668
Alignment:
Q  123 aaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaat 222  Q
    ||||||| ||||||||||| |  ||||| | || ||| |||| |||||||||| ||||| |||||||||| ||||||||||||||||   ||||||||||    
T  5564 aaagtgagaaattgatgattaattgatgtagaattgtagaattgatgtagaaagtgtgtacagaccttagataatccataggatgatatctggaatcaat 5663  T
Q  223 tttaa 227  Q
     ||||    
T  5664 gttaa 5668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 34338 - 34225
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  34338 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 34241  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  34240 tagggttaagagtgat 34225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 17469 - 17573
Alignment:
Q  123 aaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaat 222  Q
    ||||||| ||||||||||| |  ||||| | || ||| |||| |||||||||| ||| | |||||||||| ||||||||||||||||   ||||||||||    
T  17469 aaagtgagaaattgatgattaactgatgcagaattgtagaattgatgtagaaagtgtttacagaccttagataatccataggatgatatctggaatcaat 17568  T
Q  223 tttaa 227  Q
    |||||    
T  17569 tttaa 17573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 107317 - 107204
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  107317 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 107220  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  107219 tagggttaagagtgat 107204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 115818 - 115744
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||    
T  115818 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt 115744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 531 - 406
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||  | ||    
T  531 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttcagaat 433  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    |||||||||||||| | ||||||||||    
T  432 tagggttaaaagtggttaattgatgat 406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 10194 - 10069
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||  | |||||  |||||||| | ||    
T  10194 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggttttcgtttttgagaatttgagaat 10096  T
Q  115 tagggttaaaagtgataaattgatgat 141  Q
    ||||||||| |||| | ||||||||||    
T  10095 tagggttaagagtggttaattgatgat 10069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 227
Target Start/End: Original strand, 28684 - 28903
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaa-attgaatttaacatggttgtaggtagtagtttt-ag 103  Q
    |||||||| || ||||||||||||||||||||| ||||||  |||||||  | | | |||||  |||  |||||||| | ||||||||  ||||||| ||    
T  28684 gatcgattttcttaaggtaagggtgggactaacattcaatcttcttaagcctttaattctgatgattagatttaacaag-ttgtaggtt-tagttttgag 28781  T
Q  104 aatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatag 203  Q
    |||| ||  ||||||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||||||||| ||||| || ||||||| |||||||||     
T  28782 aatt-ggaaattagggttaagagtgataa-ttgaggattagatgatggaaacttgtagaattgatgtagaaagtgtgtacaaaccttagataatccataa 28879  T
Q  204 gatgatgattggaatcaattttaa 227  Q
      ||||| || |||||| ||||||    
T  28880 agtgatgtttagaatcagttttaa 28903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 135504 - 135614
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    |||||||||||||||||||||||||| ||||  ||||| | | | |||| ||||||||||||||| |||||||||| ||||||||  ||||||||| |||    
T  135504 taaggtaagggtgggactaaccttcactaattctaagtgtataattctgaaaattgaatttaaca-ggttgtaggttgtagttttgggaatttgggaatt 135602  T
Q  116 agggttaaaagt 127  Q
    || |||| ||||    
T  135603 agagttagaagt 135614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 158822 - 158932
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    |||||||||||||||||||||||||||||||  | ||||| ||| |||  |||||| ||||||||  ||||||||| ||||||||  ||||||||| |||    
T  158822 taaggtaagggtgggactaaccttcaataattctgagtatatgattctaaaaattggatttaaca-agttgtaggttgtagttttgggaatttgggaatt 158920  T
Q  116 agggttaaaagt 127  Q
    ||||||| ||||    
T  158921 agggttagaagt 158932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 1698 - 1811
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| ||||||   |||||||| | || ||| |||| |||||||||| ||| | |||||||||| ||||||||||| ||||| |    
T  1698 attagggttaagagtgataa-ttgatggatagatgatgtagaattgtagaattgatgtagaaagtgtttacagaccttagataatccatagggtgatgtt 1796  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  1797 tagaatcagttttaa 1811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 4917 - 4709
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||| | ||||||  | |||||| | ||| |||||   ||| |||||||| ||||||||| | |||||||  |||||||| | ||    
T  4917 taaggtaagggtgggactagcattcaattctattaagtctatgattctgatggttgtatttaaca-ggttgtagg-attagtttttgagaatttgagaat 4820  T
Q  115 tagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattg 214  Q
    |||| |  ||||||| ||||||||||| |  ||||| |||| ||||  || |||||||||||||||| ||||||||||  |||||||||| ||||   ||    
T  4819 taggtt--aaagtgagaaattgatgattaattgatgaaaaattgttagattgatgtagaaactgtgtacagaccttagacaatccataggttgatatctg 4722  T
Q  215 gaatcaattttaa 227  Q
    |||||||| ||||    
T  4721 gaatcaatgttaa 4709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 13976 - 13915
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    |||||||||||||| | |||||||||| |||||||||||||||| |  ||||||||| ||||    
T  13976 gatgtagaaactgtttacagaccttagataatccataggatgattacaggaatcaatattaa 13915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 4270 - 4153
Alignment:
Q  25 agggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggattagggtta 122  Q
    |||||||||||||| ||||||||||||||||   ||| |||| |||||| |||||| || |||||| ||  ||||||| |||||||||| ||||||||||    
T  4270 agggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaatat-gttgtaagttttagttttgagaatttgggaattagggtta 4172  T
Q  123 aaagtgataaattgatgat 141  Q
    ||| |||| | ||||||||    
T  4171 aaattgattatttgatgat 4153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 3995 - 3921
Alignment:
Q  153 aaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    |||||| ||||| |||||||||| ||||| |||||||||| ||||||||||| ||||| || |||||| ||||||    
T  3995 aaactgctgaattgatgtagaaagtgtgtacagaccttagataatccatagggtgatgttttgaatcagttttaa 3921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 227
Target Start/End: Complemental strand, 58692 - 58580
Alignment:
Q  114 ttagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgatt 213  Q
    |||||||||| ||||| || |||| ||| | ||||||||||  ||| |||| |||||||||| ||| | |||||||||| ||||||||||| ||||| ||    
T  58692 ttagggttaagagtgagaa-ttgaggattaaatgatggaaacttgtagaattgatgtagaaagtgtttacagaccttagataatccatagggtgatgttt 58594  T
Q  214 ggaatcaattttaa 227  Q
     |||||| ||||||    
T  58593 agaatcagttttaa 58580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 7626 - 7513
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctga-aattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| ||||| ||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  7626 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgagaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 7529  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  7528 tagggttaagagtgat 7513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 18779 - 18666
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  ||||| || | ||    
T  18779 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatctgagaat 18682  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  18681 tagggttaagagtgat 18666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 3662 - 3549
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| |||| |||||| |||||| || |||||||||  |||||||  |||||||| | ||    
T  3662 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatat-gttgtaggt-ttagtttttgagaatttgagaat 3565  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  3564 tagggttaagagtgat 3549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 97895 - 97791
Alignment:
Q  123 aaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaat 222  Q
    ||||||||||||||||||| |  ||||| |||| ||||  || ||||||| |||||||| |||||||||   |||||||||||||||   ||||||||||    
T  97895 aaagtgataaattgatgattaattgatgaaaaattgttagattgatgtaggaactgtgtacagaccttacacaatccataggatgatatctggaatcaat 97796  T
Q  223 tttaa 227  Q
     ||||    
T  97795 gttaa 97791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 107173 - 107069
Alignment:
Q  123 aaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaat 222  Q
    ||||||||||||||||||| |  ||||| |||| ||||  || ||||||| |||||||| |||||||||   |||||||||||||||   ||||||||||    
T  107173 aaagtgataaattgatgattaattgatgaaaaattgttagattgatgtaggaactgtgtacagaccttacacaatccataggatgatatctggaatcaat 107074  T
Q  223 tttaa 227  Q
     ||||    
T  107073 gttaa 107069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 1490 - 1400
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatggttgtaggtagtagttttagaatttg 109  Q
    |||||||||||||||| ||| ||| || |||| | ||||||||| ||||||  |||| ||||||||||||||||| |  |||||||||||||    
T  1490 taaggtaagggtgggattaaactttaaaaatcctgagtatgtgattctgaagatgaa-ttaacatggttgtaggttgaggttttagaatttg 1400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 2084 - 2023
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    |||||||||||||||| ||||||||||| ||||| |||| ||||   |||||||||| ||||    
T  2084 gatgtagaaactgtgtacagaccttaggcaatccttaggttgatatctggaatcaatgttaa 2023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 78 - 4
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||    
T  78 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggt 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 28329 - 28439
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    ||||||||||||||||||| |||||||||||  | ||||| ||| |||| |||||| ||||||||  ||||||||| ||||||||  ||||||||  |||    
T  28329 taaggtaagggtgggactacccttcaataattctgagtatatgattctgaaaattggatttaaca-agttgtaggttgtagttttgggaatttggaaatt 28427  T
Q  116 agggttaaaagt 127  Q
    ||||||| ||||    
T  28428 agggttagaagt 28439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 33773 - 33859
Alignment:
Q  123 aaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    ||||||| ||||||||||| |  ||||| |||| ||||  || |||||||||||||||| ||||||||||  |||||||||| ||||    
T  33773 aaagtgagaaattgatgattaattgatgaaaaattgttagattgatgtagaaactgtgtacagaccttagacaatccataggttgat 33859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 8221 - 8147
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||||||||| ||||||||||||||||   ||| |||| |||||| ||||||||| |||||||||    
T  8221 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacat-gttgtaggt 8147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 28029 - 27892
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgact-ctgaaa-ttgaatttaacatggttgtaggtagtagtttt-agaatttggggat 114  Q
    ||||||||||||||||||| |||||||||||  ||||| | | | | |||||| ||| |||||||||| ||||||||  ||||||| || ||||||  ||    
T  28029 taaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatg-ttgtaggtt-tagttttgaggatttggaaat 27932  T
Q  115 tagggttaaaagtgataaattgatgatcagatgatggaaa 154  Q
    |||||||||||||||||||||| |||| | ||||| ||||    
T  27931 tagggttaaaagtgataaattgttgattatatgattgaaa 27892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 10826 - 10761
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacat 82  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| |||||||||    
T  10826 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat 10761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 43169 - 43281
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaa-attgaatttaacatggttgtaggtagtagtttt--agaatttggggatt 115  Q
    |||||||||||||||||||| |||||||||||| ||| | ||| |||||| |||| | ||||||| |||||||||  |||||||  |||||||| | |||    
T  43169 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaatattgtacttaacat-gttgtaggt-ttagtttttgagaatttgagaatt 43266  T
Q  116 agggttaaaagtgat 130  Q
    |||||||| ||||||    
T  43267 agggttaagagtgat 43281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 81631 - 81509
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactct-gaaattgaatttaacatggttgtaggtagtagtttt-ag 103  Q
    |||||||| || |||||||||||||||||||||||||| ||||  ||| |   ||| |||  ||||||||||||||| |||||||||| ||||||||  |    
T  81631 gatcgattttcttaaggtaagggtgggactaaccttcactaattctaaatggatgattctaaaaattgaatttaaca-ggttgtaggttgtagttttggg 81533  T
Q  104 aatttggggattagggttaaaagt 127  Q
    |||||||| |||||| ||| ||||    
T  81532 aatttgggaattaggtttagaagt 81509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 5418 - 5352
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatg 83  Q
    |||||||||||||||||||||||||| ||||  ||||| | ||| |||| |||||||||||||||||    
T  5418 taaggtaagggtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaacatg 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 10433 - 10487
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    |||||||||| | |||||||||||||||||||||||||  ||||| |||||||||    
T  10433 cgatcgattaacctaaggtaagggtgggactaaccttctttaatcataagtatgt 10487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 18948 - 19061
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    |||||||||||| ||||| |||||| ||| ||||||||||||  ||| |||| |||||||| | ||| | |||||||||| | ||||||| | ||||| |    
T  18948 attagggttaaa-gtgatcaattgaggattagatgatggaaacttgtagaattgatgtagagaatgtttccagaccttagatgatccataaggtgatgtt 19046  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  19047 tagaatcagttttaa 19061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 226
Target Start/End: Complemental strand, 25119 - 24997
Alignment:
Q  104 aatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatag 203  Q
    |||||||| |||||||| ||| ||||||| ||| |||| ||||  || |||  ||||||||  | ||||||| ||| | |||| ||||| |||| |||||    
T  25119 aatttgggaattagggtaaaaggtgataatttggtgattagatagtgaaaacgtgttgaattaacgtagaaattgtatacagatcttagataatgcatag 25020  T
Q  204 gatgatgattggaatcaatttta 226  Q
    |||||||||| |||||| |||||    
T  25019 gatgatgattagaatcagtttta 24997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 226
Target Start/End: Complemental strand, 35989 - 35867
Alignment:
Q  104 aatttggggattagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccatag 203  Q
    |||||||| |||||||| ||| ||||||| ||| |||| ||||  || |||  ||||||||  | ||||||| ||| | |||| ||||| |||| |||||    
T  35989 aatttgggaattagggtaaaaggtgataatttggtgattagatagtgaaaacgtgttgaattaacgtagaaattgtatacagatcttagataatgcatag 35890  T
Q  204 gatgatgattggaatcaatttta 226  Q
    |||||||||| |||||| |||||    
T  35889 gatgatgattagaatcagtttta 35867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 121005 - 120869
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatcttaagtatgtgact-ctgaaa-ttgaatttaacatggttgtaggtagtagtttt-agaatttggggatt 115  Q
    |||||||||||||||||| |||||||||||  ||||| | | | | |||||| ||| |||||||||| ||||||||  ||||||| || ||||| | |||    
T  121005 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatg-ttgtaggtt-tagttttgaggatttgtgaatt 120908  T
Q  116 agggttaaaagtgataaattgatgatcagatgatggaaa 154  Q
    ||||||||||||||||||||| |||| | ||||| ||||    
T  120907 agggttaaaagtgataaattgttgattatatgattgaaa 120869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 6420 - 6461
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  6420 taaggtaagggtgggactaaccttcattaatcataagtatgt 6461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 51328 - 51365
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagt 55  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  51328 taaggtaagggtgggactaacattcaataatcttaagt 51365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 12673 - 12759
Alignment:
Q  67 aaattgaatttaacatggttgtaggtagtagtttt-agaatttggggattagggttaaaagtgataaattgatgatcagatgatggaaa 154  Q
    |||||| |||||||||| ||||||||  ||||||| || |||||||||||||||||||||||||| ||||| |||| | ||||| ||||    
T  12673 aaattgtatttaacatg-ttgtaggtt-tagttttgaggatttggggattagggttaaaagtgattaattgttgattatatgattgaaa 12759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 8774 - 8661
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    |||| ||||||||| |||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| |||||||||  |||||||  |||||||| | ||    
T  8774 taagttaagggtggaactaacattcaataatcttgagtgtatgattctgaaaattgtatttaacat-gttgtaggt-ttagtttttgagaatttgagaat 8677  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  8676 tagggttaagagtgat 8661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 20073 - 20184
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagttttag 103  Q
    |||||||| | | ||||||||||| |||||||||||||| ||||  ||||| | | | |||| ||||||||||||||| ||||||||||  ||||||  |    
T  20073 cgatcgatcaacctaaggtaagggcgggactaaccttcactaattctaagtgtataattctgaaaattgaatttaaca-ggttgtaggttatagtttggg 20171  T
Q  104 aatttggggatta 116  Q
    |||||||| ||||    
T  20172 aatttgggaatta 20184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 14463 - 14368
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgat 209  Q
    |||||||||||| |||| |||||   ||| || ||||| |||| ||||  || |||||||||||||| | |||||||||| ||||||||||||||||    
T  14463 attagggttaaa-gtgagaaatttgagattagttgatgaaaaattgttagattgatgtagaaactgtttacagaccttagataatccataggatgat 14368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 2096 - 2045
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa 69  Q
    ||||||||||||| ||||||| |||||||||||||||| | ||| |||||||    
T  2096 taaggtaagggtgagactaacattcaataatcttaagtctatgattctgaaa 2045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 2021 - 2131
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagttttag-aatttggggatt 115  Q
    |||| ||||||||||| ||||||||| ||||  ||||| | ||| | || |||||||||||||||| ||||||||| |||||||| | |||||||| |||    
T  2021 taagctaagggtgggattaaccttcactaattctaagtgtatgattttgaaaattgaatttaacat-gttgtaggttgtagttttggaaatttgggaatt 2119  T
Q  116 agggttaaaagt 127  Q
    ||| ||| ||||    
T  2120 aggtttataagt 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 1550 - 1476
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggt 92  Q
    ||||||||||||||||||||| |||||||||||| ||| | ||| | || |||||| ||||||||| |||||||||    
T  1550 taaggtaagggtgggactaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggt 1476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 13492 - 13382
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagttttag-aatttggggatt 115  Q
    |||||||||| || |||||||||| ||| ||  | ||||| ||| ||||||| |||||||||||| | |||||||| | |||||| | |||||||| |||    
T  13492 taaggtaaggatgtgactaacctttaatcattctcagtatatgattctgaaaattgaatttaacaag-ttgtaggttgaagttttgggaatttgggaatt 13394  T
Q  116 agggttaaaagt 127  Q
    ||||||||||||    
T  13393 agggttaaaagt 13382  T

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Target: scaffold0039 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 9928 - 9979
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa 69  Q
    |||||||||||||||||||||||||  ||||| ||||||||| | |||||||    
T  9928 taaggtaagggtgggactaaccttctttaatcataagtatgtaattctgaaa 9979  T

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Target: scaffold0411 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 48
Target Start/End: Original strand, 13417 - 13447
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataat 48  Q
    |||||||||||||||||||||||||||||||    
T  13417 taaggtaagggtgggactaaccttcaataat 13447  T

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Target: scaffold0306 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 10660 - 10726
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatg 83  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||||    
T  10660 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatg 10726  T

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Target: scaffold0081 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 4097 - 4210
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| ||| |||| ||||||   |||||||| | || ||| |||| |||||||||| ||  | |||||||||| ||||||||||| ||||| |    
T  4097 attagggttaagagtcataa-ttgatggatagatgatgtagaattgtagaattgatgtagaaagtggttacagaccttagataatccatagggtgatgtt 4195  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  4196 tagaatcagttttaa 4210  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 54907 - 55020
Alignment:
Q  113 attagggttaaaagtgataaattgatgatcagatgatggaaaactgttgaatggatgtagaaactgtgtgcagaccttaggtaatccataggatgatgat 212  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||  ||| |||| |||| |||||  |||| || || |||| |||| |||||| ||||| |    
T  54907 attagggttaagagtgataa-ttgaggattagatgatggaaatttgtagaattgatggagaaagcgtgtacatactttagataattcatagggtgatgtt 55005  T
Q  213 tggaatcaattttaa 227  Q
    | |||||| ||||||    
T  55006 tagaatcagttttaa 55020  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 174286 - 174232
Alignment:
Q  5 cgatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    |||||||||| | ||| |||||||||||||||||||||  ||||| |||||||||    
T  174286 cgatcgattaacctaaagtaagggtgggactaaccttctttaatcataagtatgt 174232  T

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Target: scaffold0630 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 9115 - 9074
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  9115 taaggtaagggtgggactaaccttctttaatcataagtatgt 9074  T

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Target: scaffold0401 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 8873 - 8832
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  8873 taaggtaagggtgggactaaccttctttaatcataagtatgt 8832  T

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Target: scaffold0162 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 25621 - 25682
Alignment:
Q  166 gatgtagaaactgtgtgcagaccttaggtaatccataggatgatgattggaatcaattttaa 227  Q
    |||||||||||||| | |||||||||| ||||||||| |||||| |  ||||||||| ||||    
T  25621 gatgtagaaactgtttacagaccttagataatccataagatgattacaggaatcaatgttaa 25682  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 33837 - 33874
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagt 55  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  33837 taaggtaagggtgagactaacattcaataatcttaagt 33874  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 40219 - 40284
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaattgaatttaacatg 83  Q
    ||||||||||||||||||||| ||||||  |||||||  | ||| | |||||||| ||||||||||    
T  40219 taaggtaagggtgggactaacattcaatcttcttaagcctatgattttgaaattggatttaacatg 40284  T

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Target: scaffold0048 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 57025 - 56984
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgt 59  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  57025 taaggtaagggtgggactaaccttctttaatcataagtatgt 56984  T

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Target: scaffold0319 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 6163 - 6050
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctgaaa-ttgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    |||||||| |||| ||||||| ||||||||| || ||| | ||| ||||||| ||| |||||||||| ||||||||  |||||||  |||||||| | ||    
T  6163 taaggtaaaggtgagactaacattcaataattttgagtctatgattctgaaaattgtatttaacatg-ttgtaggtt-tagtttttgagaatttgagaat 6066  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  6065 tagggttaagagtgat 6050  T

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Target: scaffold0317 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 6257 - 6370
Alignment:
Q  18 taaggtaagggtgggactaaccttcaataatcttaagtatgtgactctg-aaattgaatttaacatggttgtaggtagtagtttt--agaatttggggat 114  Q
    ||||| ||||||| ||||||| |||||||||||| ||| | ||| |||| |||||| ||||||||| ||||||| |  |||||||  |||||||| | ||    
T  6257 taaggaaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacat-gttgtagat-ttagtttttgagaatttgagaat 6354  T
Q  115 tagggttaaaagtgat 130  Q
    ||||||||| ||||||    
T  6355 tagggttaagagtgat 6370  T

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Target: scaffold0290 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 1136 - 1088
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaag 54  Q
    |||||||| || ||||||||||||||||||||| ||||||  |||||||    
T  1136 gatcgattttcttaaggtaagggtgggactaacattcaatcttcttaag 1088  T

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Target: scaffold0125 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 1039 - 1087
Alignment:
Q  6 gatcgattatcgtaaggtaagggtgggactaaccttcaataatcttaag 54  Q
    |||||||| || ||||||||||||||||||||| ||||||  |||||||    
T  1039 gatcgattttcttaaggtaagggtgggactaacattcaatcttcttaag 1087  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 60777 - 60745
Alignment:
Q  19 aaggtaagggtgggactaaccttcaataatctt 51  Q
    |||||||||||||||||||| ||||||||||||    
T  60777 aaggtaagggtgggactaacattcaataatctt 60745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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