View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3723_low_3 (Length: 235)
Name: NF3723_low_3
Description: NF3723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3723_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 6 - 224
Target Start/End: Original strand, 25011488 - 25011706
Alignment:
| Q |
6 |
aaacacgttgctttgtcaaattatcgtttcgtgtaagtgctatacactattcgaagaattccacaggattgaagagtaagtttgaagagaaattattgaa |
105 |
Q |
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| T |
25011488 |
aaacacgttgctttgtcaaattatcgtttcgaaaaagtgctatacactattcgaagaattccacaggattgaagagtaagtttgaagagaaattattgaa |
25011587 |
T |
|
| Q |
106 |
accgtcaagttgagtactcacagagtgaagaatccctttggttgtaacatcaaatgcacctgcagtaccaccagcagcactgatccagtcaacgatcctc |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25011588 |
accgtcaagttgagtactcacagagtgaagaatccctttggttgtaacatcaaatgcacctgcagtaccaccagcagcactgatccagtcaacgatcctc |
25011687 |
T |
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| Q |
206 |
tgcctgtgtgcatcttgat |
224 |
Q |
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||||||||||||||||||| |
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| T |
25011688 |
tgcctgtgtgcatcttgat |
25011706 |
T |
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