View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3725_low_15 (Length: 251)

Name: NF3725_low_15
Description: NF3725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3725_low_15
NF3725_low_15
[»] chr4 (13 HSPs)
chr4 (11-251)||(36407115-36407355)
chr4 (11-246)||(36399658-36399893)
chr4 (11-250)||(36429270-36429509)
chr4 (11-251)||(36376225-36376465)
chr4 (11-246)||(36435723-36435958)
chr4 (11-248)||(36419277-36419514)
chr4 (85-251)||(36412312-36412478)
chr4 (71-246)||(36370513-36370688)
chr4 (11-246)||(36389469-36389705)
chr4 (11-69)||(36370433-36370491)
chr4 (107-195)||(36437727-36437815)
chr4 (153-197)||(40823841-40823885)
chr4 (152-196)||(48476691-48476735)
[»] chr8 (4 HSPs)
chr8 (72-177)||(15697353-15697458)
chr8 (113-194)||(15799843-15799924)
chr8 (114-194)||(15722546-15722626)
chr8 (113-177)||(15805392-15805456)
[»] chr2 (2 HSPs)
chr2 (88-195)||(2662470-2662577)
chr2 (151-195)||(2682025-2682069)
[»] chr3 (1 HSPs)
chr3 (152-189)||(13855176-13855213)
[»] scaffold0090 (1 HSPs)
scaffold0090 (152-189)||(8284-8321)
[»] chr1 (2 HSPs)
chr1 (152-189)||(47607375-47607412)
chr1 (155-195)||(47287663-47287703)
[»] chr7 (6 HSPs)
chr7 (153-197)||(20168090-20168134)
chr7 (153-197)||(20231557-20231601)
chr7 (153-197)||(20243622-20243666)
chr7 (153-197)||(20264016-20264060)
chr7 (153-197)||(20279525-20279569)
chr7 (153-189)||(20289266-20289302)


Alignment Details
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 36407115 - 36407355
Alignment:
Q  11 caaaggtcatcattggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36407115 caaaggtcatcattggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattc 36407214  T
Q  111 atagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatcca 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36407215 atagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatcca 36407314  T
Q  211 agcaagaacaaaaagagtggtcggaacatagtatgtgtcac 251  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36407315 agcaagaacaaaaagagtggtcggaacatagtatgtgtcac 36407355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 36399658 - 36399893
Alignment:
Q  11 caaaggtcatcattggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattc 110  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36399658 caaaggtcatcattggattggggtaagcgttttgaaattatttgtggcattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattc 36399757  T
Q  111 atagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatcca 210  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36399758 atagagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagatttcggtatggctagaatatttggagaagatgaaatcca 36399857  T
Q  211 agcaagaacaaaaagagtggtcggaacatagtatgt 246  Q
    ||||||||||||||||||||||||||||||||||||    
T  36399858 agcaagaacaaaaagagtggtcggaacatagtatgt 36399893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 11 - 250
Target Start/End: Original strand, 36429270 - 36429509
Alignment:
Q  11 caaaggtcatcattggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattc 110  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36429270 caaaggtcgtcattggattgggtaaagcgttttgaaattatttgtgggattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattc 36429369  T
Q  111 atagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatcca 210  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  36429370 atagagatctaaaagccagcaacgttctcctcgatgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaattca 36429469  T
Q  211 agcaagaacaaaaagagtggtcggaacatagtatgtgtca 250  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  36429470 agcaagaacaaaaagagtggtcggaacatagtaggtgtca 36429509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 36376225 - 36376465
Alignment:
Q  11 caaaggtcatcattggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattc 110  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36376225 caaaggtcatcattggattggggaaagcgttttgaaattatttgtgggattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattc 36376324  T
Q  111 atagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatcca 210  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  36376325 atagagatctaaaagccagcaacgttctcctcgatgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaataca 36376424  T
Q  211 agcaagaacaaaaagagtggtcggaacatagtatgtgtcac 251  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  36376425 agcaagaacaaaaagagtggttggaacatagtatgtttcac 36376465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 36435723 - 36435958
Alignment:
Q  11 caaaggtcatcattggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattc 110  Q
    |||||||||| |||||||||||  |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36435723 caaaggtcattattggattggggtaagcgttttgaaattatttgtggcattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattc 36435822  T
Q  111 atagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatcca 210  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  36435823 atagagatctaaaagccagcaatgttctccttgatgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaataca 36435922  T
Q  211 agcaagaacaaaaagagtggtcggaacatagtatgt 246  Q
    ||||||||||||||||||||| ||||||||||||||    
T  36435923 agcaagaacaaaaagagtggttggaacatagtatgt 36435958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 36419277 - 36419514
Alignment:
Q  11 caaaggtcatcattggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattc 110  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |    
T  36419277 caaaggtcatcattggattgggttacgcgttttgaaattatttgtgggattgctcgaggtgtattatatcttcatcaagattcaaggctgaaaataatcc 36419376  T
Q  111 atagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatcca 210  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  36419377 atagagatctaaaagccagcaacgttctccttgatgctgtaatgaatcccaaaatctcggattttggtatggctagaatatttggagaagatgaaattca 36419476  T
Q  211 agcaagaacaaaaagagtggtcggaacatagtatgtgt 248  Q
    ||| |||||||||||||| || ||||||||||||||||    
T  36419477 agctagaacaaaaagagttgttggaacatagtatgtgt 36419514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 85 - 251
Target Start/End: Original strand, 36412312 - 36412478
Alignment:
Q  85 ccaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggct 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36412312 ccaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggct 36412411  T
Q  185 agaatatttggagaagatgaaatccaagcaagaacaaaaagagtggtcggaacatagtatgtgtcac 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36412412 agaatatttggagaagatgaaatccaagcaagaacaaaaagagtggtcggaacatagtatgtgtcac 36412478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 71 - 246
Target Start/End: Original strand, 36370513 - 36370688
Alignment:
Q  71 gttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcag 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  36370513 gttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcag 36370612  T
Q  171 attttggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaaagagtggtcggaacatagtatgt 246  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36370613 attttggtatggctagaatatttggagaagatgaaattcaagcaagaacaaaaagagtggtcggaacatagtatgt 36370688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 36389469 - 36389705
Alignment:
Q  11 caaaggtcatcattggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattc 110  Q
    ||||||||||||||||||||||  || ||||||||||| ||  |||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  36389469 caaaggtcatcattggattggggcaaacgttttgaaattat--gtgggattgctcgaggcgttttatatcttcatcaagattcaaggctgaaaatcattc 36389566  T
Q  111 atagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttgga---gaagatgaaat 207  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||   || ||||||||    
T  36389567 atagagacctaaaagccagcaatgttctccttgacgctgcaatgaaccctaaaatctcagattttggtatggctagaatatttggagacgatgatgaaat 36389666  T
Q  208 ccaagcaagaacaaaaagagtggtcggaacatagtatgt 246  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  36389667 ccaagcaataacaaaaagagtggttggaacatagtatgt 36389705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 36370433 - 36370491
Alignment:
Q  11 caaaggtcatcattggattgggtaaagcgttttgaaatcatttgtgggattgctcgagg 69  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  36370433 caaaggtcatcattggattgggttaagcgttttgaaattatttgtgtgattgctcgagg 36370491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 36437815 - 36437727
Alignment:
Q  107 attcatagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttgg 195  Q
    |||||||||||  |||| |||||||||||  |  | ||| ||||| |||| || |||||  |||||||||||||||||||||| |||||    
T  36437815 attcatagagacttaaaggccagcaatgtcttgttggacactgcattgaacccaaaaattgcagattttggtatggctagaatgtttgg 36437727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 40823885 - 40823841
Alignment:
Q  153 tgaatcccaaaatctcagattttggtatggctagaatatttggag 197  Q
    ||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  40823885 tgaatccaaaaatatcagactttggtatggctagaatctttggag 40823841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 48476735 - 48476691
Alignment:
Q  152 atgaatcccaaaatctcagattttggtatggctagaatatttgga 196  Q
    |||||||| || || ||||||||||||||||||||||| ||||||    
T  48476735 atgaatcctaagatttcagattttggtatggctagaatttttgga 48476691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 177
Target Start/End: Complemental strand, 15697458 - 15697353
Alignment:
Q  72 ttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcaga 171  Q
    ||||||| ||||||||||||||  | || | | | || ||||||||||| ||||||||||||||||| || || | || ||||||||| ||||| |||||    
T  15697458 ttttataccttcaccaagattctcgacttagagttatccatagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccgaaaatatcaga 15697359  T
Q  172 ttttgg 177  Q
    ||||||    
T  15697358 ttttgg 15697353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 15799924 - 15799843
Alignment:
Q  113 agagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttg 194  Q
    |||||||| ||||||||||||||||| || || | || ||||||||| ||||| |||||||||||  |||| |||| |||||    
T  15799924 agagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttg 15799843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 15722626 - 15722546
Alignment:
Q  114 gagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttg 194  Q
    ||||||| ||||||||||| ||||| || |||  || ||||||||| ||||| |||||||||||| |||| |||| |||||    
T  15722626 gagatctgaaagccagcaacgttcttctggacagtgaaatgaatccaaaaatatcagattttggtttggcaagaaaatttg 15722546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 15805456 - 15805392
Alignment:
Q  113 agagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttgg 177  Q
    |||||||| ||||||||||||||||| || || | || ||||||||| ||||| |||||||||||    
T  15805456 agagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttgg 15805392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 195
Target Start/End: Complemental strand, 2662577 - 2662470
Alignment:
Q  88 agattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctaga 187  Q
    ||||||||| || | |||||||||||||||||||||||| |||||||||||  | || |  | ||||||||| ||||| || || ||||| ||||| |||    
T  2662577 agattcaagactaagaataattcatagagatctaaaagcaagcaatgttcttttagatggcgaaatgaatccaaaaatttctgactttggaatggcaaga 2662478  T
Q  188 atatttgg 195  Q
    || |||||    
T  2662477 atgtttgg 2662470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 2682069 - 2682025
Alignment:
Q  151 aatgaatcccaaaatctcagattttggtatggctagaatatttgg 195  Q
    ||||||||| ||||| ||||| ||||| |||||||||||||||||    
T  2682069 aatgaatccaaaaatatcagactttgggatggctagaatatttgg 2682025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 13855176 - 13855213
Alignment:
Q  152 atgaatcccaaaatctcagattttggtatggctagaat 189  Q
    |||||||||||||| |||||||||||||||||||||||    
T  13855176 atgaatcccaaaatttcagattttggtatggctagaat 13855213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 8321 - 8284
Alignment:
Q  152 atgaatcccaaaatctcagattttggtatggctagaat 189  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  8321 atgaatcccaaaatttcagattttggcatggctagaat 8284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 47607375 - 47607412
Alignment:
Q  152 atgaatcccaaaatctcagattttggtatggctagaat 189  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  47607375 atgaatcctaaaatctcagattttggcatggctagaat 47607412  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 47287663 - 47287703
Alignment:
Q  155 aatcccaaaatctcagattttggtatggctagaatatttgg 195  Q
    ||||||||||| ||||||||||| ||||| |||||||||||    
T  47287663 aatcccaaaatttcagattttgggatggcaagaatatttgg 47287703  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000003; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 20168134 - 20168090
Alignment:
Q  153 tgaatcccaaaatctcagattttggtatggctagaatatttggag 197  Q
    ||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  20168134 tgaatccaaaaatatcagaatttggtatggctagaatctttggag 20168090  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 20231557 - 20231601
Alignment:
Q  153 tgaatcccaaaatctcagattttggtatggctagaatatttggag 197  Q
    ||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  20231557 tgaatccaaaaatatcagactttggtatggctagaatctttggag 20231601  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 20243622 - 20243666
Alignment:
Q  153 tgaatcccaaaatctcagattttggtatggctagaatatttggag 197  Q
    ||||||| ||||| ||||| |||||| ||||||||||||||||||    
T  20243622 tgaatccaaaaatatcagactttggtctggctagaatatttggag 20243666  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 20264016 - 20264060
Alignment:
Q  153 tgaatcccaaaatctcagattttggtatggctagaatatttggag 197  Q
    ||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  20264016 tgaatccaaaaatatcagactttggtatggctagaatctttggag 20264060  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 20279525 - 20279569
Alignment:
Q  153 tgaatcccaaaatctcagattttggtatggctagaatatttggag 197  Q
    ||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  20279525 tgaatccaaaaatatcagactttggtatggctagaatctttggag 20279569  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 20289266 - 20289302
Alignment:
Q  153 tgaatcccaaaatctcagattttggtatggctagaat 189  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  20289266 tgaatcccaaaatatcagactttggtatggctagaat 20289302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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