View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3726_high_1 (Length: 1066)

Name: NF3726_high_1
Description: NF3726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3726_high_1
NF3726_high_1
[»] chr5 (28 HSPs)
chr5 (28-617)||(37430426-37431015)
chr5 (852-1051)||(37431018-37431216)
chr5 (633-680)||(32872785-32872832)
chr5 (629-681)||(36562936-36562988)
chr5 (999-1051)||(37411506-37411558)
chr5 (757-808)||(24486894-24486944)
chr5 (750-788)||(34379482-34379520)
chr5 (748-809)||(5007734-5007794)
chr5 (750-787)||(32912068-32912105)
chr5 (747-787)||(11954461-11954501)
chr5 (631-671)||(16971985-16972025)
chr5 (750-809)||(4434479-4434537)
chr5 (750-809)||(14206397-14206455)
chr5 (750-785)||(22649666-22649701)
chr5 (28-75)||(37698462-37698509)
chr5 (750-808)||(3640201-3640258)
chr5 (633-671)||(11954577-11954615)
chr5 (752-809)||(14923080-14923135)
chr5 (750-808)||(32732123-32732180)
chr5 (1002-1044)||(37370284-37370326)
chr5 (750-788)||(40829443-40829481)
chr5 (751-788)||(6940155-6940192)
chr5 (754-787)||(7076577-7076610)
chr5 (750-787)||(8675437-8675474)
chr5 (750-787)||(14532534-14532571)
chr5 (631-680)||(31748473-31748522)
chr5 (750-787)||(34124651-34124688)
chr5 (750-807)||(43153065-43153121)
[»] chr7 (27 HSPs)
chr7 (630-681)||(29723809-29723860)
chr7 (632-681)||(2008718-2008767)
chr7 (753-809)||(26749014-26749068)
chr7 (633-681)||(12007073-12007121)
chr7 (633-681)||(15325527-15325575)
chr7 (630-681)||(37352246-37352297)
chr7 (750-808)||(11352978-11353035)
chr7 (750-788)||(18111616-18111654)
chr7 (745-787)||(46880932-46880974)
chr7 (636-681)||(28249460-28249505)
chr7 (750-806)||(33465044-33465099)
chr7 (633-681)||(33845178-33845226)
chr7 (744-808)||(41985099-41985162)
chr7 (750-809)||(43942646-43942703)
chr7 (632-668)||(46881051-46881087)
chr7 (750-809)||(3937126-3937184)
chr7 (751-809)||(2323301-2323358)
chr7 (631-681)||(32777592-32777642)
chr7 (748-809)||(2469700-2469760)
chr7 (636-681)||(21103148-21103193)
chr7 (750-787)||(24532947-24532984)
chr7 (744-809)||(37351989-37352053)
chr7 (750-787)||(40353294-40353331)
chr7 (632-681)||(43807699-43807748)
chr7 (750-807)||(45420065-45420121)
chr7 (750-787)||(47145077-47145114)
chr7 (750-807)||(49142522-49142578)
[»] chr4 (30 HSPs)
chr4 (633-681)||(39158241-39158289)
chr4 (633-681)||(51255882-51255930)
chr4 (633-681)||(18316073-18316121)
chr4 (754-807)||(25318073-25318128)
chr4 (633-681)||(38519929-38519977)
chr4 (634-671)||(21014143-21014180)
chr4 (750-787)||(40348823-40348860)
chr4 (750-806)||(48335564-48335621)
chr4 (630-671)||(55266171-55266212)
chr4 (745-805)||(5386385-5386444)
chr4 (633-681)||(29227130-29227178)
chr4 (750-805)||(9095949-9096003)
chr4 (633-680)||(22813609-22813656)
chr4 (750-816)||(39605969-39606033)
chr4 (750-809)||(43769720-43769778)
chr4 (750-808)||(28657445-28657502)
chr4 (750-808)||(37727059-37727117)
chr4 (745-787)||(39158135-39158177)
chr4 (750-788)||(49585023-49585061)
chr4 (748-782)||(56557768-56557802)
chr4 (750-787)||(149489-149526)
chr4 (750-806)||(1580288-1580342)
chr4 (752-808)||(4106052-4106106)
chr4 (751-808)||(4949516-4949572)
chr4 (750-787)||(7627878-7627915)
chr4 (750-787)||(26206981-26207018)
chr4 (632-681)||(26600085-26600134)
chr4 (750-807)||(31657657-31657713)
chr4 (748-785)||(41262347-41262384)
chr4 (750-806)||(50608629-50608683)
[»] chr3 (23 HSPs)
chr3 (633-681)||(29525999-29526047)
chr3 (748-806)||(9753230-9753287)
chr3 (631-681)||(34307426-34307476)
chr3 (633-681)||(4494124-4494172)
chr3 (750-812)||(19148996-19149056)
chr3 (750-805)||(35377086-35377141)
chr3 (750-809)||(50745557-50745615)
chr3 (745-787)||(38671647-38671689)
chr3 (750-809)||(3281720-3281778)
chr3 (636-671)||(27168572-27168607)
chr3 (748-807)||(47683800-47683858)
chr3 (750-809)||(49361840-49361898)
chr3 (750-809)||(49761316-49761374)
chr3 (751-785)||(10464975-10465009)
chr3 (750-808)||(29846896-29846953)
chr3 (750-787)||(3953479-3953516)
chr3 (750-787)||(24095410-24095447)
chr3 (754-806)||(24256780-24256830)
chr3 (750-807)||(28700471-28700527)
chr3 (750-807)||(35368621-35368677)
chr3 (780-809)||(38470597-38470626)
chr3 (636-681)||(39713927-39713972)
chr3 (750-787)||(50314654-50314691)
[»] chr8 (23 HSPs)
chr8 (633-680)||(33451452-33451499)
chr8 (633-681)||(1068742-1068790)
chr8 (751-807)||(7010684-7010739)
chr8 (750-808)||(9963694-9963752)
chr8 (632-671)||(42652739-42652778)
chr8 (744-809)||(40413348-40413412)
chr8 (750-806)||(6243045-6243100)
chr8 (633-681)||(15716863-15716911)
chr8 (633-681)||(33107754-33107802)
chr8 (633-681)||(34435624-34435672)
chr8 (633-681)||(44091022-44091070)
chr8 (750-809)||(14710898-14710956)
chr8 (634-665)||(36874001-36874032)
chr8 (750-805)||(39211054-39211108)
chr8 (751-804)||(17823469-17823520)
chr8 (750-788)||(28756564-28756602)
chr8 (750-808)||(30439510-30439567)
chr8 (750-808)||(37392133-37392190)
chr8 (754-787)||(8645195-8645228)
chr8 (631-680)||(11134720-11134769)
chr8 (745-782)||(34435736-34435773)
chr8 (750-811)||(38939194-38939254)
chr8 (750-787)||(41520998-41521035)
[»] chr2 (23 HSPs)
chr2 (633-671)||(26480977-26481015)
chr2 (420-466)||(41265762-41265808)
chr2 (631-681)||(44239172-44239222)
chr2 (632-681)||(2427885-2427934)
chr2 (628-681)||(11965929-11965982)
chr2 (751-808)||(42607536-42607592)
chr2 (750-809)||(6049349-6049408)
chr2 (750-809)||(10711733-10711791)
chr2 (632-681)||(37731086-37731135)
chr2 (750-806)||(37737982-37738036)
chr2 (637-681)||(14877125-14877169)
chr2 (633-681)||(31578570-31578618)
chr2 (633-681)||(37316702-37316750)
chr2 (753-805)||(13265975-13266029)
chr2 (779-810)||(17569749-17569780)
chr2 (745-788)||(19916684-19916727)
chr2 (745-784)||(37003643-37003682)
chr2 (751-809)||(6646832-6646889)
chr2 (750-788)||(21738620-21738658)
chr2 (750-788)||(40210072-40210110)
chr2 (750-807)||(22296134-22296190)
chr2 (750-807)||(22353180-22353236)
chr2 (745-782)||(37731199-37731236)
[»] chr1 (31 HSPs)
chr1 (633-671)||(4213218-4213256)
chr1 (637-681)||(7918953-7918997)
chr1 (750-806)||(47398456-47398511)
chr1 (633-681)||(47642494-47642542)
chr1 (633-681)||(48983555-48983603)
chr1 (630-681)||(38878785-38878836)
chr1 (751-809)||(50797788-50797845)
chr1 (751-787)||(8846003-8846039)
chr1 (750-806)||(18336158-18336213)
chr1 (633-681)||(27742745-27742793)
chr1 (633-681)||(40439727-40439775)
chr1 (633-681)||(42468728-42468776)
chr1 (750-806)||(51718631-51718687)
chr1 (750-809)||(8200084-8200142)
chr1 (750-809)||(11121489-11121547)
chr1 (750-809)||(38303692-38303751)
chr1 (750-809)||(40596059-40596117)
chr1 (750-809)||(48325783-48325841)
chr1 (751-809)||(611641-611698)
chr1 (745-787)||(4213102-4213144)
chr1 (745-807)||(4857921-4857982)
chr1 (750-808)||(33358163-33358220)
chr1 (744-806)||(37690429-37690490)
chr1 (754-811)||(48103398-48103453)
chr1 (750-788)||(52437523-52437561)
chr1 (750-787)||(5771752-5771789)
chr1 (750-787)||(40328745-40328782)
chr1 (751-788)||(46281465-46281502)
chr1 (750-807)||(48220148-48220204)
chr1 (632-681)||(48858959-48859008)
chr1 (754-787)||(50824771-50824804)
[»] chr6 (9 HSPs)
chr6 (631-671)||(17182244-17182284)
chr6 (420-471)||(34260975-34261026)
chr6 (633-671)||(1287059-1287097)
chr6 (633-681)||(33712456-33712504)
chr6 (750-785)||(5570338-5570373)
chr6 (633-680)||(5739651-5739698)
chr6 (631-681)||(8645444-8645494)
chr6 (748-782)||(34442065-34442099)
chr6 (636-681)||(18064980-18065025)
[»] scaffold0204 (1 HSPs)
scaffold0204 (750-806)||(23086-23143)
[»] scaffold0201 (1 HSPs)
scaffold0201 (632-681)||(8608-8657)
[»] scaffold0618 (1 HSPs)
scaffold0618 (633-681)||(8840-8888)
[»] scaffold0276 (1 HSPs)
scaffold0276 (750-808)||(1656-1711)
[»] scaffold0184 (1 HSPs)
scaffold0184 (633-681)||(13444-13492)
[»] scaffold0078 (1 HSPs)
scaffold0078 (633-681)||(59352-59400)
[»] scaffold0034 (1 HSPs)
scaffold0034 (635-675)||(101790-101830)
[»] scaffold0054 (1 HSPs)
scaffold0054 (750-808)||(31605-31662)


Alignment Details
Target: chr5 (Bit Score: 542; Significance: 0; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 542; E-Value: 0
Query Start/End: Original strand, 28 - 617
Target Start/End: Original strand, 37430426 - 37431015
Alignment:
Q  28 gtgaaaggcaagataaggaaatagaaaacaaaaggaccccatttagaggaaattatactctcttgtttaggattttggatttgattattttagcctatat 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||  |||||||||||||||||| |||    
T  37430426 gtgaaaggcaagataaggaaatagaaaacaaaaggaccccatttagaggaaactatactctcttcttgaggattttttatttgattattttagcctctat 37430525  T
Q  128 ctatagaggttatgaagaggtttgaaagatgcagaagcatgacctacaaagcattgattgcaaacatatagtagttgataagaagaatgaataagggaaa 227  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  37430526 ctatagatgttatgaagaggtttgaaagatgcagaagcatgacctactaagcattgattgcaaccatatagtagttgataagcagaatgaatcagggaaa 37430625  T
Q  228 agaatattgcatatatgtcttattctctttgtatttgaaattgtggtagtcttgtcttgtgcattggactattagtgttttcctgtcctggtttgacaaa 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37430626 agaatattgcatatatgtcttattctctttgtatttgaaattgtggtagtcttgtcttgtgcattggactattagtgttttcctgtcctggtttgacaaa 37430725  T
Q  328 tcttttctggtgttctggtttgacaaatcttaatgctttacctatacagtgtttaattcgttaatagaacaattcctatgatcacaatttccaaattaat 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37430726 tcttttctggtgttctggtttgacaaatcttaatgctttacctatacagtgtttaattcgttaatagaataattcctatgatcacaatttccaaattaat 37430825  T
Q  428 cttgtttcgtgtataaattaagacatttacattcacattccatatttgttactgataaatttatgctgcatgctaaattttagaagtatttaatttgaat 527  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37430826 cttgtttcgtgtataaattaagacatttacattcacattccatatttgttactgataaatttatgctgcatgctaaattttagaagtatttaatttgaat 37430925  T
Q  528 aagcatatgcaaatagtactttgtaaattataaaccaaatgaaataattagtcattcagtttcattgttactaatatcacaatatactgt 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37430926 aagcatatgcaaatagtactttgtaaattataaaccaaatgaaataattagtcattcagtttcattgttactaatatcacaatatactgt 37431015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 852 - 1051
Target Start/End: Original strand, 37431018 - 37431216
Alignment:
Q  852 agttaatcatattcgagacatattattgggcaatcaaatatgaatacttttcaagttggtattccaactattcatcactttgcgaaagactacttcttcc 951  Q
    |||||||| | ||||||||||  |||| | ||||||||||||||||||| ||||||||||||||||| |||| ||||| |||||| |||||  | |||||    
T  37431018 agttaatcttgttcgagacat--tattagacaatcaaatatgaatacttctcaagttggtattccaattatttatcacgttgcgagagactggtccttcc 37431115  T
Q  952 actagacccgactatgtttaccatattttttggtgtatgac-attaacaacaacattaattcattagcatccatgtaaaagtttggtgtatatttaagat 1050  Q
    ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||| ||| ||||| ||||||||||  |||||||||||||||||||||||||    
T  37431116 actggacccaactatgtttaccatattttttggtgtatgactattgacaacagcatcaattccttagcatccacataaaagtttggtgtatatttaagat 37431215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 633 - 680
Target Start/End: Original strand, 32872785 - 32872832
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 680  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  32872785 gagcaatgttatttgaacaaccctttcttgtgacaacttgttggacaa 32872832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 629 - 681
Target Start/End: Original strand, 36562936 - 36562988
Alignment:
Q  629 caatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||    
T  36562936 caatgaggaatgttatttgaacaaccctttgttgggacaacttgttggacaac 36562988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 999 - 1051
Target Start/End: Complemental strand, 37411558 - 37411506
Alignment:
Q  999 aacaacattaattcattagcatccatgtaaaagtttggtgtatatttaagatg 1051  Q
    |||||||||||||||||||||||||   |||||||| ||||||||||||||||    
T  37411558 aacaacattaattcattagcatccacagaaaagtttcgtgtatatttaagatg 37411506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 808
Target Start/End: Complemental strand, 24486944 - 24486894
Alignment:
Q  757 gtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    |||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  24486944 gtatgagaaagaaaattgta-caaaaattattgttcaaatatcatttctctt 24486894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 750 - 788
Target Start/End: Complemental strand, 34379520 - 34379482
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 788  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  34379520 aatgtgagtatgagagagaaaattgtcacaaaaattatt 34379482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 748 - 809
Target Start/End: Original strand, 5007734 - 5007794
Alignment:
Q  748 acaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||| || |||||| ||||||||||||| ||||| || |||||||||||||||||||||||    
T  5007734 acaatatgtgtatgaaagagaaaattgtcacaaaa-ttgttgttcaaatatcatttctcttt 5007794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 750 - 787
Target Start/End: Complemental strand, 32912105 - 32912068
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  32912105 aatgtgagtatgagagagaaaattgtcacaaaaattat 32912068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 747 - 787
Target Start/End: Complemental strand, 11954501 - 11954461
Alignment:
Q  747 aacaatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  11954501 aacaatgtgagtatgagagagaaagttgtcacaaaaattat 11954461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 631 - 671
Target Start/End: Original strand, 16971985 - 16972025
Alignment:
Q  631 atgagcaatgttatttgaacaaccctttattgtgacaactt 671  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  16971985 atgagcaatgttatttgaacaatcatttattgtgacaactt 16972025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 809
Target Start/End: Complemental strand, 4434537 - 4434479
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||| |||||||||  ||||||  |||| ||||||||||||||||||    
T  4434537 aatgtgagtatgagagaaaaaattgtc-aaaaaatggttgtacaaatatcatttctcttt 4434479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 809
Target Start/End: Complemental strand, 14206455 - 14206397
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||| |||||  ||||||  |||| ||||||||||||||||||    
T  14206455 aatgtgagtatgagagagaaagttgtc-aaaaaatggttgtacaaatatcatttctcttt 14206397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 785
Target Start/End: Original strand, 22649666 - 22649701
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaatt 785  Q
    ||||||||||||||||||||||||||| ||||||||    
T  22649666 aatgtgagtatgagagagaaaattgtcacaaaaatt 22649701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 37698462 - 37698509
Alignment:
Q  28 gtgaaaggcaagataaggaaatagaaaacaaaaggaccccatttagag 75  Q
    ||||||||||| |||||| ||||||| | |||||||||||||||||||    
T  37698462 gtgaaaggcaaaataaggcaatagaataaaaaaggaccccatttagag 37698509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 808
Target Start/End: Original strand, 3640201 - 3640258
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    ||||||||||||||||||||| ||||| | |||||   |||||||||||||||||||||    
T  3640201 aatgtgagtatgagagagaaagttgtctc-aaaatagatgttcaaatatcatttctctt 3640258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 633 - 671
Target Start/End: Complemental strand, 11954615 - 11954577
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaactt 671  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  11954615 gagcaatgttatttgaacaaccatttattttgacaactt 11954577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 752 - 809
Target Start/End: Complemental strand, 14923135 - 14923080
Alignment:
Q  752 tgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||| ||||   ||||||  |||||||||||||||||||||||    
T  14923135 tgtgagtatgagagagaaagttgta--aaaaatggttgttcaaatatcatttctcttt 14923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 808
Target Start/End: Original strand, 32732123 - 32732180
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| ||||||| |||||||||    
T  32732123 aatgtgagtatgagagagaaagttgt-acaaaaatgattgtacaaatataatttctctt 32732180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1002 - 1044
Target Start/End: Complemental strand, 37370326 - 37370284
Alignment:
Q  1002 aacattaattcattagcatccatgtaaaagtttggtgtatatt 1044  Q
    |||||||||||||||||||||||  ||| ||||||||||||||    
T  37370326 aacattaattcattagcatccatagaaatgtttggtgtatatt 37370284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 788
Target Start/End: Complemental strand, 40829481 - 40829443
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 788  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  40829481 aatgtgagtatgagagaaaaaattgtcacaaaaattatt 40829443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 751 - 788
Target Start/End: Original strand, 6940155 - 6940192
Alignment:
Q  751 atgtgagtatgagagagaaaattgtcgcaaaaattatt 788  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  6940155 atgtgagtatgagagagaaagttgtcacaaaaattatt 6940192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 754 - 787
Target Start/End: Original strand, 7076577 - 7076610
Alignment:
Q  754 tgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||||||||||||||||| ||||||||||    
T  7076577 tgagtatgagagagaaaattgtcacaaaaattat 7076610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Original strand, 8675437 - 8675474
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  8675437 aatgtgagtatgagagagaaaattgttgcaaaagttat 8675474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Complemental strand, 14532571 - 14532534
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  14532571 aatgtgagtatgagagagaaagttgtcacaaaaattat 14532534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 631 - 680
Target Start/End: Complemental strand, 31748522 - 31748473
Alignment:
Q  631 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 680  Q
    |||||| ||||||||||||||| | ||| |||||||||||| ||||||||    
T  31748522 atgagcgatgttatttgaacaatcattttttgtgacaacttattggacaa 31748473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Complemental strand, 34124688 - 34124651
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    |||||||||||||||||||||||| || ||||||||||    
T  34124688 aatgtgagtatgagagagaaaattatcacaaaaattat 34124651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 807
Target Start/End: Original strand, 43153065 - 43153121
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 807  Q
    ||||||| ||||||||||||| ||||  |||||||| |||| ||||||||||||||||    
T  43153065 aatgtgaatatgagagagaaagttgta-caaaaattgttgtacaaatatcatttctct 43153121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 29723809 - 29723860
Alignment:
Q  630 aatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  29723809 aatgagcaatgttatttgtacaaccatttattgtgacaacttgttggacaac 29723860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 632 - 681
Target Start/End: Original strand, 2008718 - 2008767
Alignment:
Q  632 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  2008718 tgagcaatgttatttgaacaaccattttatgtgacaacttgttggacaac 2008767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 753 - 809
Target Start/End: Complemental strand, 26749068 - 26749014
Alignment:
Q  753 gtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||||||||||||||    
T  26749068 gtgagtatgagagagaaagttgtc--aaaaattgttgttcaaatatcatttctcttt 26749014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 12007073 - 12007121
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  12007073 gagcaatgttatttgtacaactatttattgtgacaacttgttggacaac 12007121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 15325527 - 15325575
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||    
T  15325527 gagcaatgttatttgaacaacctttttatgtgacaacttgttggacaac 15325575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 37352297 - 37352246
Alignment:
Q  630 aatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||||||||||||| ||| ||||  ||||||||||||||||    
T  37352297 aatgagcaatgttatttgaacaaccatttcttgtaccaacttgttggacaac 37352246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 750 - 808
Target Start/End: Original strand, 11352978 - 11353035
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    ||||||||||||||||||||| ||||| | ||||||  |||||||||||||||||||||    
T  11352978 aatgtgagtatgagagagaaagttgtcac-aaaattgatgttcaaatatcatttctctt 11353035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 750 - 788
Target Start/End: Original strand, 18111616 - 18111654
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 788  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  18111616 aatgtgagtatgagagagaaaattgtcacaaaaattatt 18111654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 745 - 787
Target Start/End: Complemental strand, 46880974 - 46880932
Alignment:
Q  745 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  46880974 agaacaatatgagtatgagagagaaaattatcgcaaaaattat 46880932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 636 - 681
Target Start/End: Original strand, 28249460 - 28249505
Alignment:
Q  636 caatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||    
T  28249460 caatgttatttgaacaaccatttcttgtgacaactttttggacaac 28249505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 750 - 806
Target Start/End: Original strand, 33465044 - 33465099
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 806  Q
    ||||||||||||||||||||||||||  |||||||  |||| |||||||||||||||    
T  33465044 aatgtgagtatgagagagaaaattgt-acaaaaatggttgtacaaatatcatttctc 33465099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 33845226 - 33845178
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  33845226 gagcaatgttatttgaacaaccttttcatgtgacaatttgttggacaac 33845178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 744 - 808
Target Start/End: Original strand, 41985099 - 41985162
Alignment:
Q  744 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    ||||| ||||||||||||||||||||| ||||| | ||| | ||||| |||||||||||||||||    
T  41985099 gagaataatgtgagtatgagagagaaagttgtcac-aaattgattgtacaaatatcatttctctt 41985162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 750 - 809
Target Start/End: Complemental strand, 43942703 - 43942646
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||| ||||   ||||||  |||||||||||||||||||||||    
T  43942703 aatgtgagtatgagagagaaagttgta--aaaaatagttgttcaaatatcatttctcttt 43942646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 632 - 668
Target Start/End: Complemental strand, 46881087 - 46881051
Alignment:
Q  632 tgagcaatgttatttgaacaaccctttattgtgacaa 668  Q
    |||||||||||||||||||||||||||||| ||||||    
T  46881087 tgagcaatgttatttgaacaaccctttattatgacaa 46881051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 809
Target Start/End: Original strand, 3937126 - 3937184
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  3937126 aatgtgagtatgagagagaaagttgtcac-aaaatagatgttcaaatatcatttctcttt 3937184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 751 - 809
Target Start/End: Complemental strand, 2323358 - 2323301
Alignment:
Q  751 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    |||||||||||||||||||| |||||  |||| || |||| ||||||||||||||||||    
T  2323358 atgtgagtatgagagagaaagttgtcataaaa-ttgttgtacaaatatcatttctcttt 2323301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 32777592 - 32777642
Alignment:
Q  631 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| | ||| |||| | |||||||||||||||    
T  32777592 atgagcaatgttatttgaacaatcttttcttgtaataacttgttggacaac 32777642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 748 - 809
Target Start/End: Complemental strand, 2469760 - 2469700
Alignment:
Q  748 acaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||||| ||||| | ||| |  |||| ||||||||||||||||||    
T  2469760 acaatgtgagtatgagagagaaagttgtcac-aaagtggttgtacaaatatcatttctcttt 2469700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 636 - 681
Target Start/End: Complemental strand, 21103193 - 21103148
Alignment:
Q  636 caatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||| ||||||||||||| ||| |||||| |||||||||||||||    
T  21103193 caatgatatttgaacaaccatttcttgtgataacttgttggacaac 21103148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Original strand, 24532947 - 24532984
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  24532947 aatgtgagtatgagagaaaaaattgtcacaaaaattat 24532984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 744 - 809
Target Start/End: Original strand, 37351989 - 37352053
Alignment:
Q  744 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||| ||||||||||||||||||||| ||||| | ||| |  |||| ||||||||||||||||||    
T  37351989 gagaataatgtgagtatgagagagaaagttgtcac-aaagtggttgtacaaatatcatttctcttt 37352053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Complemental strand, 40353331 - 40353294
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  40353331 aatgtgagtatgagagagaaagttgttgcaaaaattat 40353294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 632 - 681
Target Start/End: Original strand, 43807699 - 43807748
Alignment:
Q  632 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||| |||||||||||||||||||| || |||||| |||||| |||||    
T  43807699 tgagcagtgttatttgaacaaccctttcttatgacaatttgttgtacaac 43807748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 807
Target Start/End: Original strand, 45420065 - 45420121
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 807  Q
    ||||||| ||||||||||||| |||||  ||||||  |||||||||||||||||||||    
T  45420065 aatgtgaatatgagagagaaagttgtca-aaaaatagttgttcaaatatcatttctct 45420121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Original strand, 47145077 - 47145114
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  47145077 aatgtgagtgtgagagagaaaattgtcacaaaaattat 47145114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 807
Target Start/End: Original strand, 49142522 - 49142578
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 807  Q
    |||||||||||||||||||||||| |  |||||||  |||| ||||||||||||||||    
T  49142522 aatgtgagtatgagagagaaaatt-ttacaaaaatggttgtacaaatatcatttctct 49142578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 39158289 - 39158241
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  39158289 gagcaatgttatttgaacaaccatttattgtgacaacttattggacaac 39158241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 51255930 - 51255882
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  51255930 gagcaatgttatttgtacaaccatttattgtgacaacttgttggacaac 51255882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 18316121 - 18316073
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||    
T  18316121 gagcaatgttatttgaacaaccatttcttatgacaacttgttggacaac 18316073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 754 - 807
Target Start/End: Original strand, 25318073 - 25318128
Alignment:
Q  754 tgagtatgagagagaaaattgtcgcaaaaattat--tgttcaaatatcatttctct 807  Q
    ||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||    
T  25318073 tgagtatgagagagaaaattgtcgcaaaagttatcatattcaaatatcatttctct 25318128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 38519977 - 38519929
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  38519977 gagcaatgttatttgtataaccatttattgtgacaacttgttggacaac 38519929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 634 - 671
Target Start/End: Complemental strand, 21014180 - 21014143
Alignment:
Q  634 agcaatgttatttgaacaaccctttattgtgacaactt 671  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  21014180 agcaatgttatttgaacaaccttttattgtgacaactt 21014143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 750 - 787
Target Start/End: Complemental strand, 40348860 - 40348823
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  40348860 aatgtgagtatgagagagaaaattgtcacaaaaattat 40348823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 750 - 806
Target Start/End: Complemental strand, 48335621 - 48335564
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat-tgttcaaatatcatttctc 806  Q
    ||||||| |||||||||||||||||| ||||||||| | ||||| |||||||||||||    
T  48335621 aatgtgaatatgagagagaaaattgttgcaaaaattgtatgttcgaatatcatttctc 48335564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 630 - 671
Target Start/End: Complemental strand, 55266212 - 55266171
Alignment:
Q  630 aatgagcaatgttatttgaacaaccctttattgtgacaactt 671  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  55266212 aatgagcaatgttatttgaacaatcctttattgtgataactt 55266171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 745 - 805
Target Start/End: Complemental strand, 5386444 - 5386385
Alignment:
Q  745 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttct 805  Q
    |||| ||||||||||||||||||||| |||||  ||||||  |||||||||||||||||||    
T  5386444 agaataatgtgagtatgagagagaaagttgtc-aaaaaatggttgttcaaatatcatttct 5386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 29227130 - 29227178
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  29227130 gagcaatgttatttgaacaacctttttatgtgacaatttgttggacaac 29227178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 805
Target Start/End: Complemental strand, 9096003 - 9095949
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttct 805  Q
    ||||||||||||||||||||||||||  ||||||| ||||| |||||| |||||||    
T  9096003 aatgtgagtatgagagagaaaattgt-acaaaaataattgtacaaataacatttct 9095949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 633 - 680
Target Start/End: Original strand, 22813609 - 22813656
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 680  Q
    |||||||||||||| ||||||  ||| |||||||||||||||||||||    
T  22813609 gagcaatgttatttaaacaactttttcttgtgacaacttgttggacaa 22813656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 816
Target Start/End: Complemental strand, 39606033 - 39605969
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctttcattatt 816  Q
    ||||||||||||||||||||| ||||  |||||||  ||||||| ||||||||||||| | ||||||    
T  39606033 aatgtgagtatgagagagaaagttgt--caaaaatggttgttcatatatcatttctctattattatt 39605969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 809
Target Start/End: Complemental strand, 43769778 - 43769720
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  43769778 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctcttt 43769720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 808
Target Start/End: Original strand, 28657445 - 28657502
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    ||||||||||||||||||||| ||||| | |||||   |||||||||||||||||||||    
T  28657445 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctctt 28657502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 808
Target Start/End: Original strand, 37727059 - 37727117
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    |||||||||||||||||| ||||| ||  |||| | ||||| |||||||||||||||||    
T  37727059 aatgtgagtatgagagagcaaattatcaaaaaattgattgtacaaatatcatttctctt 37727117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 745 - 787
Target Start/End: Complemental strand, 39158177 - 39158135
Alignment:
Q  745 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||    
T  39158177 agaataatgtgagtatgagagagaaagttgtcacaaaaattat 39158135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 788
Target Start/End: Complemental strand, 49585061 - 49585023
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 788  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  49585061 aatgtgagtatgagagagaaagttgtcccaaaaattatt 49585023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 748 - 782
Target Start/End: Complemental strand, 56557802 - 56557768
Alignment:
Q  748 acaatgtgagtatgagagagaaaattgtcgcaaaa 782  Q
    ||||||||||||||||||||||||||||| |||||    
T  56557802 acaatgtgagtatgagagagaaaattgtcacaaaa 56557768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Original strand, 149489 - 149526
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  149489 aatgtgagtatgagagagaaagttgtcacaaaaattat 149526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 806
Target Start/End: Original strand, 1580288 - 1580342
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 806  Q
    ||||||||||||||||||||||||||  || ||| | |||| |||||||||||||||    
T  1580288 aatgtgagtatgagagagaaaattgt--cacaaagtgttgtacaaatatcatttctc 1580342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 752 - 808
Target Start/End: Complemental strand, 4106106 - 4106052
Alignment:
Q  752 tgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    ||||||||||||||||||||||||   |||||  ||||| |||||||||||||||||    
T  4106106 tgtgagtatgagagagaaaattgt--aaaaaaaaattgtacaaatatcatttctctt 4106052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 751 - 808
Target Start/End: Complemental strand, 4949572 - 4949516
Alignment:
Q  751 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    |||||||||||||||||||| ||||| |  |||| | |||||||||||||||||||||    
T  4949572 atgtgagtatgagagagaaagttgtcac-caaatgaatgttcaaatatcatttctctt 4949516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Complemental strand, 7627915 - 7627878
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    |||||||||||||||||||||||| || ||||||||||    
T  7627915 aatgtgagtatgagagagaaaattatcacaaaaattat 7627878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Original strand, 26206981 - 26207018
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  26206981 aatgtgaatatgagagagaaaattgttgcaaaaattat 26207018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 632 - 681
Target Start/End: Original strand, 26600085 - 26600134
Alignment:
Q  632 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||||||||||  |||  |||||||| ||||||||||||    
T  26600085 tgagcaatgttatttgaacaacatttttatgtgacaatttgttggacaac 26600134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 807
Target Start/End: Complemental strand, 31657713 - 31657657
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 807  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||    
T  31657713 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctct 31657657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 748 - 785
Target Start/End: Original strand, 41262347 - 41262384
Alignment:
Q  748 acaatgtgagtatgagagagaaaattgtcgcaaaaatt 785  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  41262347 acaatgtgagtaagagagagaaaattgttgcaaaaatt 41262384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 806
Target Start/End: Original strand, 50608629 - 50608683
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 806  Q
    ||||||||||||| ||||||| |||||  |||||| ||||||||||||| |||||||    
T  50608629 aatgtgagtatgaaagagaaagttgtc--aaaaataattgttcaaatataatttctc 50608683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 29526047 - 29525999
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  29526047 gagcaatgttatttgtacaaccatttattgtgacaacttgttggacaac 29525999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 748 - 806
Target Start/End: Complemental strand, 9753287 - 9753230
Alignment:
Q  748 acaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 806  Q
    ||||||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||    
T  9753287 acaatgtgagtatgagagataaaattgtcac-aaaatgattgttcaaatatcatttctc 9753230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 34307426 - 34307476
Alignment:
Q  631 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  34307426 atgagcaatgttatttgaacaatcctttcttgtgacaacttattggacaac 34307476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 4494124 - 4494172
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||    
T  4494124 gagcaatgttatttgaacaaccatttcttatgacaacttgttggacaac 4494172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 750 - 812
Target Start/End: Complemental strand, 19149056 - 19148996
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctttcat 812  Q
    ||||||||||||||||||||| || |   |||||| |||||||||||||||||||||||||||    
T  19149056 aatgtgagtatgagagagaaagttata--aaaaatgattgttcaaatatcatttctctttcat 19148996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 750 - 805
Target Start/End: Original strand, 35377086 - 35377141
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttct 805  Q
    ||||||||| ||||||||||| ||||| ||||| || |||||||||||||||||||    
T  35377086 aatgtgagtgtgagagagaaagttgtcacaaaagttgttgttcaaatatcatttct 35377141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 750 - 809
Target Start/End: Complemental strand, 50745615 - 50745557
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| ||||||||||||||||||    
T  50745615 aatgtgagtatgagagagaaagttgta-caaaaatgattgtacaaatatcatttctcttt 50745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 745 - 787
Target Start/End: Complemental strand, 38671689 - 38671647
Alignment:
Q  745 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  38671689 agaacaatgtgagtacgagagagaaaattgtcacaaaaattat 38671647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 809
Target Start/End: Original strand, 3281720 - 3281778
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||| ||||||||| ||||| ||||| | | ||||||||||||||||||||||    
T  3281720 aatgtgagtataagagagaaagttgtcacaaaa-taaatgttcaaatatcatttctcttt 3281778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 671
Target Start/End: Original strand, 27168572 - 27168607
Alignment:
Q  636 caatgttatttgaacaaccctttattgtgacaactt 671  Q
    |||||||||||||||||||||||||| |||||||||    
T  27168572 caatgttatttgaacaaccctttattatgacaactt 27168607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 748 - 807
Target Start/End: Complemental strand, 47683858 - 47683800
Alignment:
Q  748 acaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 807  Q
    ||||||||||||||||||||||| ||||| | |||||  |||| ||||||||||||||||    
T  47683858 acaatgtgagtatgagagagaaagttgtcac-aaaatggttgtacaaatatcatttctct 47683800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 809
Target Start/End: Original strand, 49361840 - 49361898
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||| ||| ||||  ||||||| ||||| ||||||||||||||||||    
T  49361840 aatgtgagtatgagagaaaaagttgta-caaaaatgattgtacaaatatcatttctcttt 49361898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 809
Target Start/End: Complemental strand, 49761374 - 49761316
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  49761374 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctcttt 49761316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 751 - 785
Target Start/End: Complemental strand, 10465009 - 10464975
Alignment:
Q  751 atgtgagtatgagagagaaaattgtcgcaaaaatt 785  Q
    |||||||||||||||||||||||||| ||||||||    
T  10465009 atgtgagtatgagagagaaaattgtcacaaaaatt 10464975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 808
Target Start/End: Original strand, 29846896 - 29846953
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    ||||||||||||||||||||| ||||  |||||||  |||| |||||||||||||||||    
T  29846896 aatgtgagtatgagagagaaagttgt-acaaaaatggttgtacaaatatcatttctctt 29846953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Original strand, 3953479 - 3953516
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  3953479 aatgtgagtatgagagagaaagttgtcacaaaaattat 3953516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Original strand, 24095410 - 24095447
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  24095410 aatgtgagtatgagagagaaagttgtcacaaaaattat 24095447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 754 - 806
Target Start/End: Original strand, 24256780 - 24256830
Alignment:
Q  754 tgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 806  Q
    ||||||||| ||||||| |||||  |||||| |||||||||||||||||||||    
T  24256780 tgagtatgatagagaaatttgtc--aaaaatgattgttcaaatatcatttctc 24256830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 807
Target Start/End: Complemental strand, 28700527 - 28700471
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 807  Q
    ||||||||||||||||| ||| |||||  ||||||  |||||||||||||||||||||    
T  28700527 aatgtgagtatgagagataaagttgtca-aaaaatggttgttcaaatatcatttctct 28700471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 807
Target Start/End: Complemental strand, 35368677 - 35368621
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 807  Q
    ||||||||||||||||||||| ||||  |||||||  |||| ||||||||||||||||    
T  35368677 aatgtgagtatgagagagaaagttgt-acaaaaatagttgtacaaatatcatttctct 35368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 780 - 809
Target Start/End: Original strand, 38470597 - 38470626
Alignment:
Q  780 aaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||||||||||||    
T  38470597 aaaattattgttcaaatatcatttctcttt 38470626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 636 - 681
Target Start/End: Original strand, 39713927 - 39713972
Alignment:
Q  636 caatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||||||| ||| |||||| || ||||||||||||    
T  39713927 caatgttatttgaacaaccattttttgtgataatttgttggacaac 39713972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Complemental strand, 50314691 - 50314654
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  50314691 aatgtgagtatgagagagaaaattgtcgaaaaagttat 50314654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 633 - 680
Target Start/End: Original strand, 33451452 - 33451499
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 680  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  33451452 gagcaatgttatttgaacaaccctttcttgtgacaacttgttagacaa 33451499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 1068790 - 1068742
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||    
T  1068790 gagcaatgttatttgaacaacctttttatgtgacaacttgttggacaac 1068742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 751 - 807
Target Start/End: Complemental strand, 7010739 - 7010684
Alignment:
Q  751 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 807  Q
    ||||||||||||||||||||||||||  |||||| ||||| ||||||||||||||||    
T  7010739 atgtgagtatgagagagaaaattgtc-aaaaaatgattgtacaaatatcatttctct 7010684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 750 - 808
Target Start/End: Complemental strand, 9963752 - 9963694
Alignment:
Q  750 aatgtgagtatga-gagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    ||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||    
T  9963752 aatgtgagtatgatgagagaaaattgtca-aaaaattattgtacaaatatcatttctctt 9963694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 632 - 671
Target Start/End: Complemental strand, 42652778 - 42652739
Alignment:
Q  632 tgagcaatgttatttgaacaaccctttattgtgacaactt 671  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  42652778 tgagcaatgttatttgaacaactctttattgtgacaactt 42652739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 744 - 809
Target Start/End: Original strand, 40413348 - 40413412
Alignment:
Q  744 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||| || |||||||||||||||||| ||||| | ||||| ||||| ||||||||||||||||||    
T  40413348 gagaataacgtgagtatgagagagaaagttgtcac-aaaataattgtacaaatatcatttctcttt 40413412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 750 - 806
Target Start/End: Complemental strand, 6243100 - 6243045
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 806  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| |||||||||||||||    
T  6243100 aatgtgagtatgagagagaaagttgt-acaaaaatgattgtacaaatatcatttctc 6243045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 15716863 - 15716911
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||  |||  |||||||||||||||||||||    
T  15716863 gagcaatgttatttgaacaacttttttatgtgacaacttgttggacaac 15716911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 33107754 - 33107802
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  33107754 gagcaatgttatttgaacaacctttttatgtgacaatttgttggacaac 33107802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 34435624 - 34435672
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| |||  ||||||||||||||| |||||    
T  34435624 gagcaatgttatttgaacaacctttttatgtgacaacttgttgcacaac 34435672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 44091070 - 44091022
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| |||  ||||||||||| |||||||||    
T  44091070 gagcaatgttatttgaacaaccttttcatgtgacaactttttggacaac 44091022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 809
Target Start/End: Original strand, 14710898 - 14710956
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||| ||||| | ||||| ||||| |||||||||||| |||||    
T  14710898 aatgtgagtatgagagagaaagttgtcac-aaaatgattgtacaaatatcatttatcttt 14710956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 665
Target Start/End: Original strand, 36874001 - 36874032
Alignment:
Q  634 agcaatgttatttgaacaaccctttattgtga 665  Q
    ||||||||||||||||||||||||||||||||    
T  36874001 agcaatgttatttgaacaaccctttattgtga 36874032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 805
Target Start/End: Complemental strand, 39211108 - 39211054
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttct 805  Q
    ||||||||||||||||||||| |||||  ||||||  |||||||||||||||||||    
T  39211108 aatgtgagtatgagagagaaagttgtc-aaaaaatggttgttcaaatatcatttct 39211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 751 - 804
Target Start/End: Complemental strand, 17823520 - 17823469
Alignment:
Q  751 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttc 804  Q
    |||||||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  17823520 atgtgagtatgagagaaaaaattgtcataaaaat--ttgttcaaatatcatttc 17823469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 788
Target Start/End: Complemental strand, 28756602 - 28756564
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 788  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  28756602 aatgtgagtatgagagataaaattgtcacaaaaattatt 28756564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 808
Target Start/End: Original strand, 30439510 - 30439567
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    ||||||||||||||||||||| ||||| | |||||   |||||||||||||||||||||    
T  30439510 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctctt 30439567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 808
Target Start/End: Original strand, 37392133 - 37392190
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    ||||||||||||||||||||| |||||  ||||||  |||| |||||||||||||||||    
T  37392133 aatgtgagtatgagagagaaagttgtc-aaaaaatggttgtacaaatatcatttctctt 37392190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 754 - 787
Target Start/End: Complemental strand, 8645228 - 8645195
Alignment:
Q  754 tgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||||||||||||||||| ||||||||||    
T  8645228 tgagtatgagagagaaaattgtcccaaaaattat 8645195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 631 - 680
Target Start/End: Complemental strand, 11134769 - 11134720
Alignment:
Q  631 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 680  Q
    ||||||||||||||||||||||   ||| |||||| ||||||||||||||    
T  11134769 atgagcaatgttatttgaacaaatatttcttgtgataacttgttggacaa 11134720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 745 - 782
Target Start/End: Original strand, 34435736 - 34435773
Alignment:
Q  745 agaacaatgtgagtatgagagagaaaattgtcgcaaaa 782  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  34435736 agaacaatgtgtgtatgagagagaaaattgtcacaaaa 34435773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 811
Target Start/End: Original strand, 38939194 - 38939254
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctttca 811  Q
    ||||||||||||||||||||| ||||  |||||||  ||||  |||||||||||||||||||    
T  38939194 aatgtgagtatgagagagaaagttgt-acaaaaatagttgtagaaatatcatttctctttca 38939254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Complemental strand, 41521035 - 41520998
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  41521035 aatgtgagtatgagagagaaaattgttgcaaaagttat 41520998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000002; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 633 - 671
Target Start/End: Original strand, 26480977 - 26481015
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaactt 671  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26480977 gagcaatgttatttgaacaaccctttattgtgacaactt 26481015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 420 - 466
Target Start/End: Complemental strand, 41265808 - 41265762
Alignment:
Q  420 aaattaatcttgtttcgtgtataaattaagacatttacattcacatt 466  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  41265808 aaattaatcttgttccgtgtataaattaagacatatacattcacatt 41265762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 44239222 - 44239172
Alignment:
Q  631 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||||||    
T  44239222 atgagcaatgttatttgaacaaccatttattgtgacaattttttggacaac 44239172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 632 - 681
Target Start/End: Original strand, 2427885 - 2427934
Alignment:
Q  632 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  2427885 tgagcaatgttatttgaacaaccattttttgtgacaatttgttggacaac 2427934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 628 - 681
Target Start/End: Complemental strand, 11965982 - 11965929
Alignment:
Q  628 ccaatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||| |||||||||||||||||||||| |||  |||||||||||||||||||||    
T  11965982 ccaaagagcaatgttatttgaacaacctttttatgtgacaacttgttggacaac 11965929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 751 - 808
Target Start/End: Original strand, 42607536 - 42607592
Alignment:
Q  751 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||    
T  42607536 atgtgagtatgagagagaaaattgtcac-aaaataattgtacaaatatcatttctctt 42607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 750 - 809
Target Start/End: Original strand, 6049349 - 6049408
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||| || || |||||||  ||| |||||||||||||||||||    
T  6049349 aatgtgagtatgagagagaaagttatcacaaaaatggttgatcaaatatcatttctcttt 6049408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 750 - 809
Target Start/End: Complemental strand, 10711791 - 10711733
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||||||||| | |||||   ||||||||||||||||||||||    
T  10711791 aatgtgagtatgagagagaaaattgtcac-aaaatagatgttcaaatatcatttctcttt 10711733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 632 - 681
Target Start/End: Original strand, 37731086 - 37731135
Alignment:
Q  632 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||||||||||| |||  ||||||||||||||| |||||    
T  37731086 tgagcaatgttatttgaacaacctttttatgtgacaacttgttgcacaac 37731135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 750 - 806
Target Start/End: Original strand, 37737982 - 37738036
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 806  Q
    ||||||||||||||||||||| ||||||  |||||  ||||||||||||||||||||    
T  37737982 aatgtgagtatgagagagaaagttgtcg--aaaatggttgttcaaatatcatttctc 37738036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 637 - 681
Target Start/End: Complemental strand, 14877169 - 14877125
Alignment:
Q  637 aatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||||    
T  14877169 aatgttatttgaacaaccatttcttgtgacaacttgttagacaac 14877125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 31578618 - 31578570
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||| ||||||||||| | ||| ||||||||||||||||||||||    
T  31578618 gagcaatgatatttgaacaatcatttcttgtgacaacttgttggacaac 31578570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 37316702 - 37316750
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| |||  | |||||||||||||||||||    
T  37316702 gagcaatgttatttgaacaacctttttctatgacaacttgttggacaac 37316750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 805
Target Start/End: Complemental strand, 13266029 - 13265975
Alignment:
Q  753 gtgagtatgagagagaaaattgtcgcaaaaat--tattgttcaaatatcatttct 805  Q
    ||||||||||||||||||||||| ||||||||  | |||| ||||||||||||||    
T  13266029 gtgagtatgagagagaaaattgttgcaaaaattgtgttgtacaaatatcatttct 13265975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 779 - 810
Target Start/End: Original strand, 17569749 - 17569780
Alignment:
Q  779 aaaaattattgttcaaatatcatttctctttc 810  Q
    ||||||||||||||||||||||||||||||||    
T  17569749 aaaaattattgttcaaatatcatttctctttc 17569780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 745 - 788
Target Start/End: Complemental strand, 19916727 - 19916684
Alignment:
Q  745 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattatt 788  Q
    ||||||||||| |||||||||||||| ||||| |||||||||||    
T  19916727 agaacaatgtgtgtatgagagagaaagttgtcacaaaaattatt 19916684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 745 - 784
Target Start/End: Complemental strand, 37003682 - 37003643
Alignment:
Q  745 agaacaatgtgagtatgagagagaaaattgtcgcaaaaat 784  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  37003682 agaacaatgtgagtatgagagagaaagttgtcacaaaaat 37003643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 751 - 809
Target Start/End: Complemental strand, 6646889 - 6646832
Alignment:
Q  751 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    |||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  6646889 atgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctcttt 6646832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 788
Target Start/End: Original strand, 21738620 - 21738658
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 788  Q
    |||||||||||||||||||||||| || |||||||||||    
T  21738620 aatgtgagtatgagagagaaaattatcacaaaaattatt 21738658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 788
Target Start/End: Original strand, 40210072 - 40210110
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 788  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  40210072 aatgtgagtatgagagagaaagttgtcacaaaaattatt 40210110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 807
Target Start/End: Original strand, 22296134 - 22296190
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 807  Q
    ||||||||||| ||||||||||||||  |||||||  |||| ||||||||||||||||    
T  22296134 aatgtgagtatcagagagaaaattgt-acaaaaatggttgtacaaatatcatttctct 22296190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 807
Target Start/End: Original strand, 22353180 - 22353236
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 807  Q
    ||||||||||||||| ||||| ||||| | ||||| ||||| ||||||||||||||||    
T  22353180 aatgtgagtatgagaaagaaagttgtcac-aaaatgattgtacaaatatcatttctct 22353236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 745 - 782
Target Start/End: Original strand, 37731199 - 37731236
Alignment:
Q  745 agaacaatgtgagtatgagagagaaaattgtcgcaaaa 782  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  37731199 agaacaatgtgtgtatgagagagaaaattgtcacaaaa 37731236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000002; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 633 - 671
Target Start/End: Complemental strand, 4213256 - 4213218
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaactt 671  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4213256 gagcaatgttatttgaacaaccctttattgtgacaactt 4213218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 637 - 681
Target Start/End: Original strand, 7918953 - 7918997
Alignment:
Q  637 aatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||    
T  7918953 aatgttatttgaacaaccctttcttgtgacaacttgttagacaac 7918997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 750 - 806
Target Start/End: Original strand, 47398456 - 47398511
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 806  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||||    
T  47398456 aatgtgagtatgagagagaaaattgtc-aaaaaatgaatgttcaaatatcatttctc 47398511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 47642494 - 47642542
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  47642494 gagcaatgttatttgaacaaccattttttgggacaacttgttggacaac 47642542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 48983555 - 48983603
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  48983555 gagcaatgttattggtacaaccatttattgtgacaacttgttggacaac 48983603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 38878785 - 38878836
Alignment:
Q  630 aatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||||||||||||  |||  |||||||||||||||||||||    
T  38878785 aatgagcaatgttatttgaacaacatttttatgtgacaacttgttggacaac 38878836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 751 - 809
Target Start/End: Complemental strand, 50797845 - 50797788
Alignment:
Q  751 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    |||||||||||||||||||| ||||| | ||||| ||||| ||||||||||||||||||    
T  50797845 atgtgagtatgagagagaaagttgtcac-aaaatgattgtacaaatatcatttctcttt 50797788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 751 - 787
Target Start/End: Complemental strand, 8846039 - 8846003
Alignment:
Q  751 atgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    |||||||||||||||||||||||||| ||||||||||    
T  8846039 atgtgagtatgagagagaaaattgtcacaaaaattat 8846003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 750 - 806
Target Start/End: Complemental strand, 18336213 - 18336158
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 806  Q
    ||||||||||||||||||||| ||||| | ||||| | |||||||||||||||||||    
T  18336213 aatgtgagtatgagagagaaagttgtcac-aaaatgaatgttcaaatatcatttctc 18336158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 27742793 - 27742745
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| |||  ||| |||||||||||||||||    
T  27742793 gagcaatgttatttgaacaacctttttatgtaacaacttgttggacaac 27742745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 40439727 - 40439775
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  40439727 gagcaatgttatttgaacaacctttttatgtgacaatttgttggacaac 40439775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 42468776 - 42468728
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||| ||||||||||||| ||| ||||||||| ||||||||||||    
T  42468776 gagcaatgatatttgaacaaccatttcttgtgacaatttgttggacaac 42468728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 750 - 806
Target Start/End: Original strand, 51718631 - 51718687
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 806  Q
    ||||||||||||||||||||| ||||   ||||||  ||||||||||||||||||||    
T  51718631 aatgtgagtatgagagagaaagttgtgaaaaaaatggttgttcaaatatcatttctc 51718687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 809
Target Start/End: Complemental strand, 8200142 - 8200084
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  8200142 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctcttt 8200084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 809
Target Start/End: Complemental strand, 11121547 - 11121489
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||| ||||  ||||| || |||| ||||||||||||||||||    
T  11121547 aatgtgagtatgagagagaaagttgt-acaaaagttgttgtacaaatatcatttctcttt 11121489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 809
Target Start/End: Original strand, 38303692 - 38303751
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    |||| |||||||||||||||| |||| | |||| ||  ||||||||||||||||||||||    
T  38303692 aatgcgagtatgagagagaaagttgttgtaaaagttgatgttcaaatatcatttctcttt 38303751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 809
Target Start/End: Original strand, 40596059 - 40596117
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||||||||| ||||| | |||||  |||| ||||||||||||||||||    
T  40596059 aatgtgagtatgagagagaaagttgtcac-aaaatggttgtacaaatatcatttctcttt 40596117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 809
Target Start/End: Original strand, 48325783 - 48325841
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    ||||||||||||||| ||||||||||| | |||||  |||| ||||||||||||||||||    
T  48325783 aatgtgagtatgagatagaaaattgtcac-aaaatggttgtacaaatatcatttctcttt 48325841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 751 - 809
Target Start/End: Original strand, 611641 - 611698
Alignment:
Q  751 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 809  Q
    |||||| | |||||||||||||| || ||||| | ||||||||||||||||||||||||    
T  611641 atgtgaatttgagagagaaaattatcccaaaa-tgattgttcaaatatcatttctcttt 611698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 745 - 787
Target Start/End: Complemental strand, 4213144 - 4213102
Alignment:
Q  745 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||    
T  4213144 agaacaatgtgagtatgagagagaaagttgtcacaaaagttat 4213102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 745 - 807
Target Start/End: Complemental strand, 4857982 - 4857921
Alignment:
Q  745 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 807  Q
    ||||||||||| | |||||||||||| |||||  |||| | ||||||||||||||||||||||    
T  4857982 agaacaatgtgtgcatgagagagaaagttgtca-aaaagtgattgttcaaatatcatttctct 4857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 808
Target Start/End: Original strand, 33358163 - 33358220
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    ||||||||||||||||||||| ||||| | |||||   |||||||||||||||||||||    
T  33358163 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctctt 33358220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 744 - 806
Target Start/End: Complemental strand, 37690490 - 37690429
Alignment:
Q  744 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 806  Q
    ||||| |||||||||||||||||||||||||||   ||| | ||||| |||||||||||||||    
T  37690490 gagaataatgtgagtatgagagagaaaattgtc-ataaagtgattgtacaaatatcatttctc 37690429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 754 - 811
Target Start/End: Original strand, 48103398 - 48103453
Alignment:
Q  754 tgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctttca 811  Q
    ||||||||||||||||| ||||| |||| | |  ||||||||||||||||||||||||    
T  48103398 tgagtatgagagagaaagttgtcacaaatagt--tgttcaaatatcatttctctttca 48103453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 788
Target Start/End: Complemental strand, 52437561 - 52437523
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 788  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  52437561 aatgtgagtatgagagagaaagttgtcacaaaaattatt 52437523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Original strand, 5771752 - 5771789
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  5771752 aatgtgagtatgagagagaaagttgtcacaaaaattat 5771789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 787
Target Start/End: Original strand, 40328745 - 40328782
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    |||||||||||||||||||||||| || ||||||||||    
T  40328745 aatgtgagtatgagagagaaaattatcacaaaaattat 40328782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 751 - 788
Target Start/End: Complemental strand, 46281502 - 46281465
Alignment:
Q  751 atgtgagtatgagagagaaaattgtcgcaaaaattatt 788  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  46281502 atgtgagtatgagagagaaagttgtcacaaaaattatt 46281465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 750 - 807
Target Start/End: Original strand, 48220148 - 48220204
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 807  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||    
T  48220148 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctct 48220204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 632 - 681
Target Start/End: Complemental strand, 48859008 - 48858959
Alignment:
Q  632 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||| ||||||||| ||| |||||||||| | |||||||||    
T  48859008 tgagcaatgttatatgaacaaccatttcttgtgacaaccttttggacaac 48858959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 754 - 787
Target Start/End: Complemental strand, 50824804 - 50824771
Alignment:
Q  754 tgagtatgagagagaaaattgtcgcaaaaattat 787  Q
    ||||||||||||||||||||||| ||||||||||    
T  50824804 tgagtatgagagagaaaattgtcacaaaaattat 50824771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000003; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 631 - 671
Target Start/End: Complemental strand, 17182284 - 17182244
Alignment:
Q  631 atgagcaatgttatttgaacaaccctttattgtgacaactt 671  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  17182284 atgagcaatgttatttgaacaaccctttattatgacaactt 17182244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 420 - 471
Target Start/End: Complemental strand, 34261026 - 34260975
Alignment:
Q  420 aaattaatcttgtttcgtgtataaattaagacatttacattcacattccata 471  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||| ||||    
T  34261026 aaattaatcttgtcccgtgtataaattaagacatatacattcacatttcata 34260975  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 633 - 671
Target Start/End: Complemental strand, 1287097 - 1287059
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaactt 671  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  1287097 gagcaatgttatttgaacaatcctttattgtgacaactt 1287059  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 33712504 - 33712456
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| |||  ||| |||||||||||||||||    
T  33712504 gagcaatgttatttgaacaacctttttatgtaacaacttgttggacaac 33712456  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 750 - 785
Target Start/End: Original strand, 5570338 - 5570373
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaatt 785  Q
    ||||||||||||||||||||||||||| ||||||||    
T  5570338 aatgtgagtatgagagagaaaattgtcacaaaaatt 5570373  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 633 - 680
Target Start/End: Original strand, 5739651 - 5739698
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 680  Q
    ||||||||||||||||||| || ||| || ||||||||||||||||||    
T  5739651 gagcaatgttatttgaacatccatttcttatgacaacttgttggacaa 5739698  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 8645494 - 8645444
Alignment:
Q  631 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||| ||||||||||||| ||| |||||||||| | |||||||||    
T  8645494 atgagcaatgatatttgaacaaccatttcttgtgacaaccttttggacaac 8645444  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 748 - 782
Target Start/End: Original strand, 34442065 - 34442099
Alignment:
Q  748 acaatgtgagtatgagagagaaaattgtcgcaaaa 782  Q
    ||||||||||||||||||||||||||||| |||||    
T  34442065 acaatgtgagtatgagagagaaaattgtcacaaaa 34442099  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 636 - 681
Target Start/End: Original strand, 18064980 - 18065025
Alignment:
Q  636 caatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||||||  |||  |||||||||||||||||||||    
T  18064980 caatgttatttgaacaacttttttatgtgacaacttgttggacaac 18065025  T

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Target: scaffold0204 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 750 - 806
Target Start/End: Complemental strand, 23143 - 23086
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattat-tgttcaaatatcatttctc 806  Q
    ||||||| |||||||||||||||||| ||||||||| | ||||| |||||||||||||    
T  23143 aatgtgaatatgagagagaaaattgttgcaaaaattgtatgttcgaatatcatttctc 23086  T

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Target: scaffold0201 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 632 - 681
Target Start/End: Complemental strand, 8657 - 8608
Alignment:
Q  632 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| ||||||    
T  8657 tgagcaatgttatttgaacaactatttcttgtgacaacttgttagacaac 8608  T

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Target: scaffold0618 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 8840 - 8888
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||||||||||| |||  ||||||||||| |||||||||    
T  8840 gagcaatgttatttgaacaaccttttcatgtgacaactttttggacaac 8888  T

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Target: scaffold0276 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 750 - 808
Target Start/End: Complemental strand, 1711 - 1656
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    |||| |||||||||||||||||||||| |||||    ||||||||||||||||||||||    
T  1711 aatgagagtatgagagagaaaattgtcacaaaa---gttgttcaaatatcatttctctt 1656  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 13444 - 13492
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||| |||||| |||| |||||||||||| |||||||||    
T  13444 gagcaatgttatttaaacaactcttttttgtgacaacttattggacaac 13492  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 59400 - 59352
Alignment:
Q  633 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 681  Q
    |||||||||||||| |||||| |||| |||||||||||| |||||||||    
T  59400 gagcaatgttatttaaacaactcttttttgtgacaacttattggacaac 59352  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 635 - 675
Target Start/End: Original strand, 101790 - 101830
Alignment:
Q  635 gcaatgttatttgaacaaccctttattgtgacaacttgttg 675  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  101790 gcaatgttatttgcacaaccctttcttgtgacaacttgttg 101830  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 750 - 808
Target Start/End: Original strand, 31605 - 31662
Alignment:
Q  750 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 808  Q
    ||||||||||||||||||||| |||||  ||||||  |||| |||||||||||||||||    
T  31605 aatgtgagtatgagagagaaagttgtc-aaaaaatggttgtacaaatatcatttctctt 31662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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