View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3726_high_115 (Length: 250)
Name: NF3726_high_115
Description: NF3726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3726_high_115 |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 44671227 - 44671466
Alignment:
| Q |
1 |
aataataatcaataaaaagaaagaaattagaaaattttgaacatatacatacgtgattagatatcggaaacattattatagtacacctgcaagacgtaat |
100 |
Q |
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| T |
44671227 |
aataataatcaataaaaagaaagaaattagaaaattttgaacatatacatacgtgattagatatcggaaacattattatagtacgcctgcaagacgtaac |
44671326 |
T |
|
| Q |
101 |
tgaacaattaacaaaagcatgcatgaggttatatttaagtttgagattaatgctcttgtttctgnnnnnnnnnnnnnnnnngatattatgattcaaaaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
44671327 |
tgaacaattaacaaaagcatgcatgaggttatatttaagtttgagattaatgctcttgtttctgtttttgttttttgttttgatattatgattcaaaaca |
44671426 |
T |
|
| Q |
201 |
cttttttacacgataatgatcacaatcctaatgacctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
44671427 |
cttttttacacgataatgatcacaatcctaatgacctttg |
44671466 |
T |
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