View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3726_high_116 (Length: 250)
Name: NF3726_high_116
Description: NF3726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3726_high_116 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 41705598 - 41705837
Alignment:
| Q |
1 |
cctataaatggcttttataaatatactctcttttgtaagatgcaaagagaaacgactttggaacttgctaaactttgcagagtttttcttcctttcattt |
100 |
Q |
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| T |
41705598 |
cctataaatggcttttataaatatacgctcttttgtaagatgcaaagagaaacgactttggaacttgctaaactttgcagagtttttcttcctttcattt |
41705697 |
T |
|
| Q |
101 |
aagtcaagtagcacatatatataaagagcatatcatagtggataaattacttattaaaatatacaaaatgcttgaaaactaaaccattgtaattgttgca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
41705698 |
aagtcaagtagcacatatatataaagagcatatcatagtggataaattacttattaaaatatacaaaatgcttgaaaactagaccattgtaattgttgca |
41705797 |
T |
|
| Q |
201 |
ctatcggtaattgaagagccaatcccaacgttcgcctatg |
240 |
Q |
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||||||||||||||| |||||||||||||||||||||||| |
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| T |
41705798 |
ctatcggtaattgaatagccaatcccaacgttcgcctatg |
41705837 |
T |
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