View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3726_high_49 (Length: 359)
Name: NF3726_high_49
Description: NF3726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3726_high_49 |
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Alignment Details
Target: chr8 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 72 - 351
Target Start/End: Complemental strand, 141925 - 141647
Alignment:
| Q |
72 |
gggagagttacacggaacttacaagtcttgaaagaaggtggaaaacagagaagagatccaaatgcnnnnnnngaactaaaaaatttgttaggttttgaga |
171 |
Q |
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| T |
141925 |
gggagagttacacggaacttacaagtcttgaaagaaggtggaaaacagagaagagatccaaatgcaaaaaa-gaactaaaaaatttgttaggttttgaga |
141827 |
T |
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| Q |
172 |
gtaacaagagttgttggtggtaataaataattacctagaatggtttatggttacatgagtttgaaagggaccaaacctacctatttcatatagaataaat |
271 |
Q |
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| T |
141826 |
gtaacaagagttgttggtggtaataaataattacctagaatggtttatggttacatgagtttgaaagggaccaaacctacctatttcatatagaataaat |
141727 |
T |
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| Q |
272 |
atgttacattgatatttgtgtaatgtgatatgaatgaatttttcttttgattctctctttgtctgtttgtgctctctgct |
351 |
Q |
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| T |
141726 |
atgttacattgatatttgtgtaatgtgatatgaatgaattttgattttgattctctctttgtctgtttgtgctctctgct |
141647 |
T |
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