View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3726_high_92 (Length: 270)

Name: NF3726_high_92
Description: NF3726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3726_high_92
NF3726_high_92
[»] chr3 (4 HSPs)
chr3 (26-253)||(49350774-49351001)
chr3 (161-235)||(28211977-28212051)
chr3 (161-234)||(48334780-48334853)
chr3 (140-236)||(24978447-24978542)
[»] chr2 (11 HSPs)
chr2 (112-242)||(17239654-17239784)
chr2 (107-243)||(35319287-35319423)
chr2 (112-242)||(25985106-25985234)
chr2 (148-239)||(11146940-11147031)
chr2 (108-211)||(6607914-6608016)
chr2 (116-210)||(14395125-14395219)
chr2 (106-211)||(11671183-11671288)
chr2 (131-241)||(30353941-30354051)
chr2 (155-234)||(26683739-26683817)
chr2 (108-155)||(42542040-42542087)
chr2 (153-193)||(32904848-32904888)
[»] chr7 (11 HSPs)
chr7 (103-242)||(25005461-25005598)
chr7 (140-242)||(45843599-45843700)
chr7 (140-243)||(48982835-48982937)
chr7 (156-253)||(33058163-33058260)
chr7 (99-169)||(37305181-37305250)
chr7 (110-173)||(37492706-37492769)
chr7 (144-195)||(44565167-44565218)
chr7 (166-253)||(48338703-48338790)
chr7 (156-230)||(40090642-40090716)
chr7 (140-192)||(29693055-29693107)
chr7 (154-217)||(37492626-37492690)
[»] chr1 (11 HSPs)
chr1 (108-242)||(35492001-35492135)
chr1 (154-242)||(41098588-41098676)
chr1 (141-241)||(36140796-36140896)
chr1 (108-199)||(30717253-30717344)
chr1 (113-180)||(1609542-1609609)
chr1 (111-201)||(8981776-8981866)
chr1 (138-242)||(27081650-27081754)
chr1 (111-195)||(30996445-30996529)
chr1 (140-173)||(18462694-18462727)
chr1 (99-154)||(1780440-1780496)
chr1 (155-214)||(29522164-29522223)
[»] chr4 (24 HSPs)
chr4 (129-253)||(15633187-15633309)
chr4 (110-234)||(33859916-33860040)
chr4 (131-234)||(19351280-19351383)
chr4 (131-242)||(33653089-33653199)
chr4 (131-242)||(28703667-28703777)
chr4 (107-237)||(41377925-41378055)
chr4 (110-242)||(46826641-46826773)
chr4 (143-210)||(1846214-1846281)
chr4 (153-240)||(46444204-46444292)
chr4 (143-210)||(12619467-12619534)
chr4 (153-243)||(25313373-25313463)
chr4 (138-244)||(30265473-30265578)
chr4 (138-244)||(30279717-30279822)
chr4 (138-244)||(30286609-30286714)
chr4 (101-217)||(22129346-22129461)
chr4 (138-230)||(48801946-48802038)
chr4 (112-243)||(16411669-16411800)
chr4 (131-234)||(32296146-32296249)
chr4 (140-211)||(39267565-39267636)
chr4 (107-217)||(25435612-25435722)
chr4 (140-239)||(25525741-25525843)
chr4 (138-253)||(20668032-20668146)
chr4 (100-147)||(31690685-31690732)
chr4 (104-152)||(17268763-17268811)
[»] chr8 (10 HSPs)
chr8 (123-252)||(13526005-13526134)
chr8 (123-252)||(13615540-13615669)
chr8 (138-242)||(17102138-17102242)
chr8 (123-243)||(8183557-8183677)
chr8 (143-234)||(8768860-8768951)
chr8 (105-201)||(28140723-28140818)
chr8 (146-234)||(41068269-41068356)
chr8 (140-234)||(31430149-31430243)
chr8 (109-179)||(7107432-7107502)
chr8 (111-147)||(40819288-40819324)
[»] chr5 (8 HSPs)
chr5 (105-253)||(36188974-36189122)
chr5 (131-253)||(6519472-6519594)
chr5 (138-217)||(27990139-27990218)
chr5 (101-156)||(34178220-34178275)
chr5 (141-210)||(471490-471559)
chr5 (169-235)||(33766191-33766257)
chr5 (153-210)||(36593851-36593908)
chr5 (138-170)||(33764425-33764457)
[»] scaffold0008 (1 HSPs)
scaffold0008 (138-231)||(240614-240707)
[»] chr6 (7 HSPs)
chr6 (110-179)||(22398324-22398393)
chr6 (108-234)||(35033538-35033664)
chr6 (144-253)||(17268881-17268989)
chr6 (143-240)||(34805912-34806009)
chr6 (151-234)||(32505681-32505765)
chr6 (113-159)||(35163002-35163048)
chr6 (144-211)||(7053927-7053997)
[»] scaffold0193 (1 HSPs)
scaffold0193 (111-217)||(19998-20104)
[»] scaffold0464 (1 HSPs)
scaffold0464 (123-159)||(6687-6723)


Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 26 - 253
Target Start/End: Complemental strand, 49351001 - 49350774
Alignment:
Q  26 actatatgttaccaaaatgaaataatttttgaattggaaatttatttttggacacaatcataagaaaaattacttttataaaaagggtcatgctaatttg 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  49351001 actatatgttaccaaaatgaaataatttttgaattggaaatttatttttggacacaatcataagaaaaattacttttataaaaagagtcatgctaacttg 49350902  T
Q  126 tgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtag 225  Q
    | || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49350901 tacccttagggtatatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaatttcgtag 49350802  T
Q  226 acaaaattttcactttaagatctttaac 253  Q
    ||||||||| ||||||||||||||||||    
T  49350801 acaaaatttccactttaagatctttaac 49350774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 28211977 - 28212051
Alignment:
Q  161 gtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaatttt 235  Q
    |||||||||||||||||||| |||| ||||||| |||| | |||||||||||||||| ||  || ||||||||||    
T  28211977 gtaaatatttattacaaaacattaagtttcaatctctagatgaataaattgacacaattttctaaacaaaatttt 28212051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 48334780 - 48334853
Alignment:
Q  161 gtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattt 234  Q
    |||||||||| | ||||||| || ||||||||  |||| |||||||||||| ||||| ||| ||||||||||||    
T  48334780 gtaaatatttgtcacaaaacatttactttcaacctctagaagaataaattggcacaatttcctagacaaaattt 48334853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 24978542 - 24978447
Alignment:
Q  140 atgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttc 236  Q
    ||||||| ||||  ||||||||||||||||||||| ||||  |||| ||||||| | || || | |||||||||| || ||  ||||||||||||||    
T  24978542 atgttaaagattttataaatggtaaatatttattaaaaaatattaattttcaatat-tataaaattaaattgacataattttctagacaaaattttc 24978447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 17239654 - 17239784
Alignment:
Q  112 gtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattg 211  Q
    |||||| ||| | |||| ||||||| |||||||||  |||||||||||||||||||||||||||||||  |||| ||||||| |||||||||||||||||    
T  17239654 gtcatgttaactcgtgcatttagggcacatgttaaacattccataaatggtaaatatttattacaaaatattaattttcaatctctaaaagaataaattg 17239753  T
Q  212 acacaaattcgtagacaaaattttcacttta 242  Q
    ||| || ||| |||||| ||||| |||||||    
T  17239754 acataatttcatagacagaatttccacttta 17239784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 35319423 - 35319287
Alignment:
Q  107 aaagggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaata 206  Q
    ||||||||||||||| ||||| | ||| || | ||||||||||||| |||||| |||||||||||||||||||| |||| ||| ||| |||| |||||||    
T  35319423 aaagggtcatgctaacttgtgtcattatggcatatgttaaggattctataaatagtaaatatttattacaaaacattaatttttaatctctagaagaata 35319324  T
Q  207 aattgacacaaattcgtagacaaaattttcactttaa 243  Q
    ||||||||||| ||| || ||||||||| || |||||    
T  35319323 aattgacacaatttcctaaacaaaatttccattttaa 35319287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 25985106 - 25985234
Alignment:
Q  112 gtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattg 211  Q
    |||||||||| ||||| ||||||   |||||||||| |||||||||||||||||||||||||||||||| |||| ||||| | |||| ||||||||||||    
T  25985106 gtcatgctaacttgtgtctttagac-acatgttaagaattccataaatggtaaatatttattacaaaaccttaattttcagtctctagaagaataaattg 25985204  T
Q  212 acacaaattcgtagacaaaattttcacttta 242  Q
    |||| ||||| || ||||||||| |||||||    
T  25985205 acac-aattcttaaacaaaatttccacttta 25985234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 11147031 - 11146940
Alignment:
Q  148 gattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttcact 239  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||| |||| |||||||||||||||  | ||| |||||||||||| ||||    
T  11147031 gattccataaatgataaatatttattacaaaacattaactttcaatctctagaagaataaattgacatgatttcctagacaaaatttccact 11146940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 6608016 - 6607914
Alignment:
Q  108 aagggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataa 207  Q
    |||||||||||||| ||||| | |||||  | ||||||||||||||||||||||| |||||||||||||||||  ||| ||||||| |||| ||||||||    
T  6608016 aagggtcatgctaacttgtgtccttaggc-atatgttaaggattccataaatggtgaatatttattacaaaacactaattttcaatctctagaagaataa 6607918  T
Q  208 attg 211  Q
    ||||    
T  6607917 attg 6607914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 14395219 - 14395125
Alignment:
Q  116 tgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaatt 210  Q
    |||||| |||||| |||| || ||||||||||||||  ||||||||||||||||||||| ||||  |||| ||||||||||||||| ||||||||    
T  14395219 tgctaacttgtgcatttatggcacatgttaaggattttataaatggtaaatatttattataaaatattaattttcaatttctaaaaaaataaatt 14395125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 11671183 - 11671288
Alignment:
Q  106 aaaagggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaat 205  Q
    |||| ||||||||||| || |||| | | ||||||| |||||||||  |||||| |||||||||||||||||| | |||| ||||||| ||||||| |||    
T  11671183 aaaaaggtcatgctaacttatgccctcaaggtacatattaaggattttataaatagtaaatatttattacaaagcattaattttcaatctctaaaaaaat 11671282  T
Q  206 aaattg 211  Q
    ||||||    
T  11671283 aaattg 11671288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 30353941 - 30354051
Alignment:
Q  131 ttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaa 230  Q
    |||||||||||||||||||||  || |||| ||||||||||||||||||  |||| |||  || | |  ||||||||||||| |||| ||| | ||||||    
T  30353941 ttagggtacatgttaaggattttatcaatgataaatatttattacaaaatattaatttttcatcttttgaagaataaattgatacaatttctttgacaaa 30354040  T
Q  231 attttcacttt 241  Q
    |||||||||||    
T  30354041 attttcacttt 30354051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 26683817 - 26683739
Alignment:
Q  155 taaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattt 234  Q
    |||||||||||||||||||| ||||  |||| ||| ||||| ||||| |||||||||| |||| ||  ||||||||||||    
T  26683817 taaatggtaaatatttattataaaatattaatttttaatttataaaa-aataaattgaaacaattttttagacaaaattt 26683739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 42542040 - 42542087
Alignment:
Q  108 aagggtcatgctaatttgtgcctttagggtacatgttaaggattccat 155  Q
    ||||||||||||||  |||||  |||||||||||||||||||||||||    
T  42542040 aagggtcatgctaacatgtgcacttagggtacatgttaaggattccat 42542087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 32904888 - 32904848
Alignment:
Q  153 cataaatggtaaatatttattacaaaactttaactttcaat 193  Q
    ||||||| |||||||||||||||||||| |||| |||||||    
T  32904888 cataaatagtaaatatttattacaaaacattaattttcaat 32904848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 103 - 242
Target Start/End: Original strand, 25005461 - 25005598
Alignment:
Q  103 ataaaaagggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaag 202  Q
    |||| |||||||||| ||| ||||||||||| || ||||||||| ||||| ||||||  ||||||||||||||||||| |||| || |||||||||||||    
T  25005461 ataacaagggtcatgttaacttgtgcctttaaggcacatgttaaagattctataaattttaaatatttattacaaaacattaatttacaatttctaaaag 25005560  T
Q  203 aataaattgacacaaattcgtagacaaaattttcacttta 242  Q
    |||||||||  |||| ||  |||| |||||||||||||||    
T  25005561 aataaattg--acaattttttagataaaattttcacttta 25005598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 45843599 - 45843700
Alignment:
Q  140 atgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttcact 239  Q
    ||||||| ||||  ||||||| ||||||||||||||||||  |||| ||||||||| ||||| ||||||||||||||| ||  |||| ||||||||||||    
T  45843599 atgttaaagattttataaatgataaatatttattacaaaatattaattttcaattt-taaaataataaattgacacaattttttagataaaattttcact 45843697  T
Q  240 tta 242  Q
    |||    
T  45843698 tta 45843700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 48982937 - 48982835
Alignment:
Q  140 atgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttcact 239  Q
    ||||||| |||||| ||  |||||||||||||||| ||||| |||| ||||||| ||| ||||||| ||||||||||| ||  || ||||||||||||||    
T  48982937 atgttaaagattccgtaggtggtaaatatttattaaaaaacattaattttcaatctcttaaagaat-aattgacacaattttatatacaaaattttcact 48982839  T
Q  240 ttaa 243  Q
    ||||    
T  48982838 ttaa 48982835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 33058163 - 33058260
Alignment:
Q  156 aaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttcactttaagatctttaac 253  Q
    ||||| ||||||||||||| ||||  |||| ||||||||| || |||||||||||||||||| ||  || |||||||||||| |||| | ||||||||    
T  33058163 aaatgataaatatttattataaaatattaattttcaatttttagaagaataaattgacacaattttctacacaaaattttcattttaggttctttaac 33058260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 37305250 - 37305181
Alignment:
Q  99 ttttataaaaagggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatt 169  Q
    |||||| ||||||||||||||||||||| ||||||   || |||||||||||| |||||||||||||||||    
T  37305250 ttttattaaaagggtcatgctaatttgtaccttta-aatatatgttaaggatttcataaatggtaaatatt 37305181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 37492769 - 37492706
Alignment:
Q  110 gggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttatt 173  Q
    |||||||||||| ||||| |||||||  ||||||||||||||  ||||||| ||||||||||||    
T  37492769 gggtcatgctaacttgtgtctttaggacacatgttaaggattttataaatgataaatatttatt 37492706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 44565167 - 44565218
Alignment:
Q  144 taaggattccataaatggtaaatatttattacaaaactttaactttcaattt 195  Q
    ||||||||  ||||||||||||||||||||||||||| |||| |||||||||    
T  44565167 taaggattttataaatggtaaatatttattacaaaacattaattttcaattt 44565218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 253
Target Start/End: Original strand, 48338703 - 48338790
Alignment:
Q  166 tatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttcactttaagatctttaac 253  Q
    |||||||||  |||| |||||||||||| | ||||| |||||||||  |||| ||| |||| ||||||||||||||||  ||||||||    
T  48338703 tatttattaacaaacattaactttcaatctttaaaataataaattggtacaatttcttagataaaattttcactttaaattctttaac 48338790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 40090642 - 40090716
Alignment:
Q  156 aaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaa 230  Q
    |||||||||||| ||||||| |||| |||| ||||||| | ||||| ||||||||||||||| |||  |||||||    
T  40090642 aaatggtaaatacttattactaaacattaattttcaatctttaaaaaaataaattgacacaatttctcagacaaa 40090716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 29693107 - 29693055
Alignment:
Q  140 atgttaaggattccataaatggtaaatatttattacaaaactttaactttcaa 192  Q
    |||||||||||||||| ||| |||||||||||||||||||  |||| ||||||    
T  29693107 atgttaaggattccatgaatagtaaatatttattacaaaatattaattttcaa 29693055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 37492690 - 37492626
Alignment:
Q  154 ataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaat-aaattgacacaa 217  Q
    ||||||| ||||||||||||| ||||| |||| ||||||||| ||||| ||| ||||||||||||    
T  37492690 ataaatgataaatatttattataaaacattaattttcaatttttaaaaaaataaaattgacacaa 37492626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 242
Target Start/End: Complemental strand, 35492135 - 35492001
Alignment:
Q  108 aagggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataa 207  Q
    ||||||| |||||| ||||||  | || | |||||||||||| ||||||||||||||||||||||||||||||  | | ||| ||| | |||||||||||    
T  35492135 aagggtcttgctaagttgtgcactgagagcacatgttaaggactccataaatggtaaatatttattacaaaacaatgatttttaatctttaaaagaataa 35492036  T
Q  208 attgacacaaattcgtagacaaaattttcacttta 242  Q
    |||||||||| ||| |||| ||||||| |||||||    
T  35492035 attgacacaatttcttagataaaatttccacttta 35492001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 41098588 - 41098676
Alignment:
Q  154 ataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttcacttta 242  Q
    ||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||| ||  |||| |||||||||||||||    
T  41098588 ataaatggtaaatatttattataaaacattaacttttaatctctaaaagaataaattgacacaattttttagataaaattttcacttta 41098676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 36140796 - 36140896
Alignment:
Q  141 tgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttcactt 240  Q
    |||||| ||||||||||||||||||||||||| ||||||  |||| |||||| || ||| ||||||||||||||||| ||| |||||| ||||| |||||    
T  36140796 tgttaaagattccataaatggtaaatatttatcacaaaatattaattttcaacttttaagagaataaattgacacaatttcctagacacaatttccactt 36140895  T
Q  241 t 241  Q
    |    
T  36140896 t 36140896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 30717253 - 30717344
Alignment:
Q  108 aagggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaa 199  Q
    |||| ||||| ||| ||||| |||||||||||||||||||||||  |||||  |||||||||||||||||||| |||| ||||||| |||||    
T  30717253 aaggctcatgttaacttgtgtctttagggtacatgttaaggattttataaacagtaaatatttattacaaaacattaattttcaatctctaa 30717344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 1609609 - 1609542
Alignment:
Q  113 tcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaac 180  Q
    ||||||||| |||||||||| | | | |||||||||||||||||||| ||||||||||||||||||||    
T  1609609 tcatgctaacttgtgcctttggagcatatgttaaggattccataaatagtaaatatttattacaaaac 1609542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 8981866 - 8981776
Alignment:
Q  111 ggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaa 201  Q
    ||||||| ||| ||||||  ||| || ||||||||| |||| ||||||||||||||||| |||||||||| |||| ||||||| |||||||    
T  8981866 ggtcatgataacttgtgctcttaaggcacatgttaaagatttcataaatggtaaatattcattacaaaacattaattttcaatctctaaaa 8981776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 27081754 - 27081650
Alignment:
Q  138 acatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttca 237  Q
    ||||||||| ||||| |||||| |||||||||||||||||||| |||| ||||||| | || || |||||||||| |||| ||  || | ||||||| ||    
T  27081754 acatgttaaagattctataaatagtaaatatttattacaaaacattaattttcaatctttagaaaaataaattgatacaattttttaaataaaatttcca 27081655  T
Q  238 cttta 242  Q
    |||||    
T  27081654 cttta 27081650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 30996529 - 30996445
Alignment:
Q  111 ggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaattt 195  Q
    ||||||| ||| |||||| |||| | ||||| ||| ||||| ||||||||  |||||||||||||||||| |||| ||| |||||    
T  30996529 ggtcatgataacttgtgcttttatgatacatattatggatttcataaatgaaaaatatttattacaaaacattaatttttaattt 30996445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 173
Target Start/End: Complemental strand, 18462727 - 18462694
Alignment:
Q  140 atgttaaggattccataaatggtaaatatttatt 173  Q
    |||||||||||||||||||| |||||||||||||    
T  18462727 atgttaaggattccataaatagtaaatatttatt 18462694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 1780440 - 1780496
Alignment:
Q  99 ttttataa-aaagggtcatgctaatttgtgcctttagggtacatgttaaggattcca 154  Q
    |||||||| |||||||| |||||| ||||||| | ||||| ||||||||||||||||    
T  1780440 ttttataataaagggtcttgctaacttgtgccctaagggtgcatgttaaggattcca 1780496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 29522223 - 29522164
Alignment:
Q  155 taaatggtaaatatttattacaaaactttaa-ctttcaatttctaaaagaataaattgaca 214  Q
    |||||||||||||||||||||||||  ||||  ||||||| ||||||| ||||||||||||    
T  29522223 taaatggtaaatatttattacaaaatattaatttttcaatctctaaaa-aataaattgaca 29522164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 7e-24; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 15633187 - 15633309
Alignment:
Q  129 ctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagaca 228  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||| || ||||||| |||||||||| ||| || |||    
T  15633187 ctttagggcatatgttaagaattccataaatggtaaatatttattacaaaac-ataattttcaatttttagaagaatagattgacacaatttc-taaaca 15633284  T
Q  229 aaattttcactttaagatctttaac 253  Q
    |||||| ||||| ||| ||||||||    
T  15633285 aaatttccacttcaagttctttaac 15633309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 33860040 - 33859916
Alignment:
Q  110 gggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaat 209  Q
    |||||||||||| |||| || |||  | ||||||||||||||| ||| ||| ||||||||||||||||||| |||| ||||||| |||||||||||||||    
T  33860040 gggtcatgctaacttgtacccttatagcacatgttaaggattctatatatgataaatatttattacaaaacattaattttcaatctctaaaagaataaat 33859941  T
Q  210 tgacacaaattcgtagacaaaattt 234  Q
    ||  |||| ||| ||||||| ||||    
T  33859940 tggtacaatttcatagacaatattt 33859916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 19351383 - 19351280
Alignment:
Q  131 ttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaa 230  Q
    |||||| ||||||||| ||| ||||||||||||||||||||||||||||  |||| ||||||| ||||||| |||||||||||| || ||| || |||||    
T  19351383 ttagggcacatgttaatgataccataaatggtaaatatttattacaaaatattaattttcaatctctaaaaaaataaattgacagaatttcctaaacaaa 19351284  T
Q  231 attt 234  Q
    ||||    
T  19351283 attt 19351280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 33653089 - 33653199
Alignment:
Q  131 ttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaa 230  Q
    |||||| |||| ||||||||| |||||||| ||||| ||||||| ||||| |||| ||||||| ||||||| ||||||||| ||||||||| || |||||    
T  33653089 ttagggcacatattaaggatttcataaatgataaatttttattataaaacattaattttcaatctctaaaa-aataaattggcacaaattcctacacaaa 33653187  T
Q  231 attttcacttta 242  Q
    ||||||||||||    
T  33653188 attttcacttta 33653199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 28703777 - 28703667
Alignment:
Q  131 ttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaa 230  Q
    |||||| | |||||||||||| |||| ||||||||||||||||||||||| |||| | ||||| | |||||| ||||||||| || ||||| | ||||||    
T  28703777 ttagggcatatgttaaggatttcatatatggtaaatatttattacaaaacattaattctcaatctttaaaaggataaattgatac-aattcctcgacaaa 28703679  T
Q  231 attttcacttta 242  Q
    ||||||||||||    
T  28703678 attttcacttta 28703667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 237
Target Start/End: Original strand, 41377925 - 41378055
Alignment:
Q  107 aaagggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaata 206  Q
    ||||| ||||||||| |||| | |||| |  |||||||||  |||  |||||||||||||||||||||||||| ||||| ||| ||| ||||||| ||||    
T  41377925 aaaggatcatgctaacttgtacatttatgacacatgttaaatattttataaatggtaaatatttattacaaaattttaatttttaatctctaaaataata 41378024  T
Q  207 aattgacacaaattcgtagacaaaattttca 237  Q
    |||| |||||| ||  |||||||||||||||    
T  41378025 aattaacacaattttttagacaaaattttca 41378055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 46826773 - 46826641
Alignment:
Q  110 gggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaat 209  Q
    |||||||| ||| ||||| | ||| || ||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| | |  || | |||||||    
T  46826773 gggtcatgttaacttgtgtccttaaggcacatgttaaggattccataaatggtaaatatttattaaaaaacattaattttcattcttaaagaaaataaat 46826674  T
Q  210 tgacacaaattcgtagacaaaattttcacttta 242  Q
    |  ||||| ||  || |||||||||||||||||    
T  46826673 ttgcacaattttctaaacaaaattttcacttta 46826641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 1846281 - 1846214
Alignment:
Q  143 ttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaatt 210  Q
    ||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||| |||||||||||    
T  1846281 ttaaggatttcataaatggtaaatatttattacaaaacattaattttcaatctctagaagaataaatt 1846214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 46444292 - 46444204
Alignment:
Q  153 cataaatggtaaatatttattacaaaactttaactttcaatttc-taaaagaataaattgacacaaattcgtagacaaaattttcactt 240  Q
    |||||||| ||||||||||||||||||| |||| ||||||| || |||||||||||||||||| || ||  |||| |||||||||||||    
T  46444292 cataaatgataaatatttattacaaaacattaattttcaatctcttaaaagaataaattgacataattttttagataaaattttcactt 46444204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 12619534 - 12619467
Alignment:
Q  143 ttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaatt 210  Q
    ||||||||| ||||| |||||||||||||||||||||| |||| |||||||||  |||||||||||||    
T  12619534 ttaaggatttcataattggtaaatatttattacaaaacattaattttcaattttaaaaagaataaatt 12619467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 25313373 - 25313463
Alignment:
Q  153 cataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttcactttaa 243  Q
    |||||||||||||||||||||||||||  |||| ||||||| |||| ||||||||||| |||  | |||  ||||| ||||||||||||||    
T  25313373 cataaatggtaaatatttattacaaaatattaattttcaatctctataagaataaattaacattatttcccagacataattttcactttaa 25313463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 30265578 - 30265473
Alignment:
Q  138 acatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttca 237  Q
    ||||||||||||||| |||||| |||||||||||| ||||||| |||| ||||||| | ||||| | |||||| |||||| ||| |  ||||||||||||    
T  30265578 acatgttaaggattctataaatagtaaatatttatcacaaaacattaattttcaatat-taaaaaattaaatttacacaatttcctgcacaaaattttca 30265480  T
Q  238 ctttaag 244  Q
     ||||||    
T  30265479 ttttaag 30265473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 30279717 - 30279822
Alignment:
Q  138 acatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttca 237  Q
    ||||||||||||||| |||||| |||||||||||| ||||||| |||| ||||||| | ||||| | |||||| |||||| ||| |  ||||||||||||    
T  30279717 acatgttaaggattctataaatagtaaatatttatcacaaaacattaattttcaatat-taaaaaattaaatttacacaatttcctgcacaaaattttca 30279815  T
Q  238 ctttaag 244  Q
     ||||||    
T  30279816 ttttaag 30279822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 30286609 - 30286714
Alignment:
Q  138 acatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttca 237  Q
    ||||||||||||||| |||||| |||||||||||| ||||||| |||| ||||||| | ||||| | |||||| |||||| ||| |  ||||||||||||    
T  30286609 acatgttaaggattctataaatagtaaatatttatcacaaaacattaattttcaatat-taaaaaattaaatttacacaatttcctgcacaaaattttca 30286707  T
Q  238 ctttaag 244  Q
     ||||||    
T  30286708 ttttaag 30286714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 22129346 - 22129461
Alignment:
Q  101 ttataaaaagggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaa 200  Q
    ||||||| | |||||||| || ||||||| ||| || ||||||||||||||||||||||   | ||||||||| |||||| |||| ||||||  || |||    
T  22129346 ttataaataaggtcatgc-aacttgtgcccttaaggcacatgttaaggattccataaattcaagatatttatttcaaaacattaattttcaaactccaaa 22129444  T
Q  201 agaataaattgacacaa 217  Q
    |||||||||||| ||||    
T  22129445 agaataaattgaaacaa 22129461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 230
Target Start/End: Original strand, 48801946 - 48802038
Alignment:
Q  138 acatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaa 230  Q
    ||||||||||||||||||||||| ||||||||||||| ||||  |||| ||||||| | || |||||||||| || |||| ||| || |||||    
T  48801946 acatgttaaggattccataaatgataaatatttattaaaaaatattaattttcaatctttagaagaataaatagaaacaatttcctaaacaaa 48802038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 16411669 - 16411800
Alignment:
Q  112 gtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattg 211  Q
    |||||| ||| ||||||| | ||||  |||||||| |||||||||||||  || ||||||||  ||||| ||||  ||||||  |||||||||||||||     
T  16411669 gtcatgttaacttgtgccataagggcgcatgttaaagattccataaatgacaagtatttattgtaaaacattaatgttcaatcactaaaagaataaattc 16411768  T
Q  212 acacaaattcgtagacaaaattttcactttaa 243  Q
    |||||| ||  |||||||||||| || |||||    
T  16411769 acacaattttttagacaaaatttccattttaa 16411800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 32296146 - 32296249
Alignment:
Q  131 ttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaa 230  Q
    |||| ||||||||||| ||||  || |||||||||||||||||||||||| |||| ||| ||| | |||||| ||||||||| | || ||| || |||||    
T  32296146 ttagagtacatgttaaagattttatgaatggtaaatatttattacaaaacattaatttttaatctttaaaaggataaattgatagaatttcctatacaaa 32296245  T
Q  231 attt 234  Q
    ||||    
T  32296246 attt 32296249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 39267565 - 39267636
Alignment:
Q  140 atgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattg 211  Q
    ||||||||||||  ||||||| ||||||||||||||||||| |||| ||||||| |||| || |||||||||    
T  39267565 atgttaaggattttataaatgataaatatttattacaaaacattaattttcaatctctagaaaaataaattg 39267636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 25435612 - 25435722
Alignment:
Q  107 aaagggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaata 206  Q
    ||||||||||| ||| ||||| |||||||| ||||||||||| ||| |||||  | ||||||||||||  |||| |||| ||| |||| |  ||| ||||    
T  25435612 aaagggtcatgttaacttgtgtctttagggcacatgttaaggtttctataaagagcaaatatttattaagaaacattaaattttaattgcgtaaaaaata 25435711  T
Q  207 aattgacacaa 217  Q
    |||||||||||    
T  25435712 aattgacacaa 25435722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 25525741 - 25525843
Alignment:
Q  140 atgttaaggattccataaatggtaaatatttattac---aaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttc 236  Q
    |||||||||||||| |||||| ||||||||||||||   || || |||| ||||||| | ||||||| ||||||||||||| ||| || || |||||| |    
T  25525741 atgttaaggattccgtaaatgataaatatttattactataacacattaattttcaatctttaaaagattaaattgacacaatttcctaaaccaaatttcc 25525840  T
Q  237 act 239  Q
    |||    
T  25525841 act 25525843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 253
Target Start/End: Original strand, 20668032 - 20668146
Alignment:
Q  138 acatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttca 237  Q
    |||||||||| ||||  |||||| ||||||||||||||||||  |||| ||| ||| ||||||  ||||||||| ||||| ||  |||| ||||||||||    
T  20668032 acatgttaag-attctgtaaatgataaatatttattacaaaatattaatttttaatatctaaactaataaattggcacaattttctagataaaattttca 20668130  T
Q  238 ctttaagatctttaac 253  Q
     |||||| || |||||    
T  20668131 ttttaagttccttaac 20668146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 31690732 - 31690685
Alignment:
Q  100 tttataaaaagggtcatgctaatttgtgcctttagggtacatgttaag 147  Q
    |||||||||||||||||||||| ||||||| ||| || ||||||||||    
T  31690732 tttataaaaagggtcatgctaacttgtgcccttaaggaacatgttaag 31690685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 17268763 - 17268811
Alignment:
Q  104 taaaaagggtcatgctaatttgtgcctttagggtacatgttaaggattc 152  Q
    ||||||| |||||| ||| |||||||||||||| |||||||||| ||||    
T  17268763 taaaaagcgtcatgttaacttgtgcctttagggcacatgttaagcattc 17268811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 252
Target Start/End: Complemental strand, 13526134 - 13526005
Alignment:
Q  123 ttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcg 222  Q
    ||||||| ||| || |||||||||||||||||||||| |||||||| ||||||||||| |||| ||||||| ||| ||||||||||||  ||||| |||     
T  13526134 ttgtgcccttaaggcacatgttaaggattccataaatagtaaatatctattacaaaacattaaatttcaatctcttaaagaataaattagcacaatttcc 13526035  T
Q  223 tagacaaaattttcactttaagatctttaa 252  Q
      || ||||||| ||||||||  |||||||    
T  13526034 cggataaaatttccactttaaattctttaa 13526005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 252
Target Start/End: Complemental strand, 13615669 - 13615540
Alignment:
Q  123 ttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcg 222  Q
    ||||||| ||| || |||||||||||||||||||||| |||||||| ||||||||||| |||| ||||||| ||| ||||||||||||  ||||| |||     
T  13615669 ttgtgcccttaaggcacatgttaaggattccataaatagtaaatatctattacaaaacattaaatttcaatctcttaaagaataaattagcacaatttcc 13615570  T
Q  223 tagacaaaattttcactttaagatctttaa 252  Q
      || ||||||| ||||||||  |||||||    
T  13615569 cggataaaatttccactttaaattctttaa 13615540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 17102242 - 17102138
Alignment:
Q  138 acatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttca 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||   | |||||||  |||||||||||| ||||| ||| ||||||| |||||||    
T  17102242 acatgttaaggattccataaatggtaaatatttattagaaaatattaatggtaaatttcttgaagaataaattggcacaatttcctagacaacattttca 17102143  T
Q  238 cttta 242  Q
    |||||    
T  17102142 cttta 17102138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 243
Target Start/End: Original strand, 8183557 - 8183677
Alignment:
Q  123 ttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcg 222  Q
    |||||| ||||||| ||||||||| |||||||||| | ||||  ||||| |||||||| |||| ||||||| | || ||| |||||||||||||||||      
T  8183557 ttgtgcttttagggcacatgttaatgattccataactagtaatcatttactacaaaacattaattttcaatctatagaagtataaattgacacaaattat 8183656  T
Q  223 tagacaaaattttcactttaa 243  Q
    ||||||||||||  |||||||    
T  8183657 tagacaaaatttctactttaa 8183677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 8768951 - 8768860
Alignment:
Q  143 ttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattt 234  Q
    |||||||||| ||||||||||||||||||||||||||| |||| ||||||| ||||  ||||||||||| |||||  |  ||||||||||||    
T  8768951 ttaaggattcaataaatggtaaatatttattacaaaacattaattttcaatctctaggagaataaattggcacaatgttctagacaaaattt 8768860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 28140818 - 28140723
Alignment:
Q  105 aaaaagggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaa 201  Q
    |||| ||||| |||||| ||||| |||||||  |||||||||||||||||||||| || ||||||||||||||||| |||| ||||||  |||||||    
T  28140818 aaaacgggtcctgctaacttgtgtctttaggacacatgttaaggattccataaatagt-aatatttattacaaaacattaattttcaacctctaaaa 28140723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 234
Target Start/End: Complemental strand, 41068356 - 41068269
Alignment:
Q  146 aggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattt 234  Q
    ||||||||||||||| ||||||||||| ||||||| |||| ||| |||||||| ||||| |||||  ||||| ||| ||||||||||||    
T  41068356 aggattccataaatgataaatatttatcacaaaacattaatttttaatttctagaagaa-aaattagcacaatttcttagacaaaattt 41068269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 31430149 - 31430243
Alignment:
Q  140 atgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattt 234  Q
    |||||||||||| ||| ||| |||||||||||||  ||| | |||| ||||||| |||||||| |||||||||||||| ||| || | |||||||    
T  31430149 atgttaaggatttcatcaattgtaaatatttattttaaagcattaattttcaatatctaaaaggataaattgacacaatttcttaaataaaattt 31430243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 7107432 - 7107502
Alignment:
Q  109 agggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaa 179  Q
    ||||||||||||| ||||||| ||| || |||||||||| ||||||  ||||||||| || |||| |||||    
T  7107432 agggtcatgctaacttgtgcccttatggcacatgttaagcattccactaatggtaaaaatctattgcaaaa 7107502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 40819288 - 40819324
Alignment:
Q  111 ggtcatgctaatttgtgcctttagggtacatgttaag 147  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  40819288 ggtcatgctaatttgtgcttttagggcacatgttaag 40819324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 253
Target Start/End: Original strand, 36188974 - 36189122
Alignment:
Q  105 aaaaagggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaa 204  Q
    ||||||||||||||||| || | || |||||  | |  ||||| |||| | ||||||||||||||||||| ||||| |||| ||||||| ||||||||||    
T  36188974 aaaaagggtcatgctaacttatacccttaggacatagattaagaattcaaaaaatggtaaatatttattataaaacattaattttcaatctctaaaagaa 36189073  T
Q  205 taaattgacacaaattcgtagacaaaattttcactttaagatctttaac 253  Q
    |||||| |||||  ||| | ||||||||||||| |||||  ||||||||    
T  36189074 taaattaacacagtttccttgacaaaattttcattttaaattctttaac 36189122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 253
Target Start/End: Original strand, 6519472 - 6519594
Alignment:
Q  131 ttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaa 230  Q
    |||| |||||||||||||||| |||||| |  | | |||||||||||||| |||| ||| ||| ||||||||||||||||||||||| ||  |||| |||    
T  6519472 ttagagtacatgttaaggatttcataaacgagataaatttattacaaaacattaatttttaatctctaaaagaataaattgacacaattttttagataaa 6519571  T
Q  231 attttcactttaagatctttaac 253  Q
    |||| ||||||| | ||||||||    
T  6519572 atttccactttaggttctttaac 6519594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 27990218 - 27990139
Alignment:
Q  138 acatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaa 217  Q
    ||||||||| |||||||||||| ||| |||||||||||||||| |||| ||||||||| || || ||||||||| |||||    
T  27990218 acatgttaatgattccataaatagtagatatttattacaaaacattaattttcaatttgtagaaaaataaattggcacaa 27990139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 34178275 - 34178220
Alignment:
Q  101 ttataaaaagggtcatgctaatttgtgcctttagggtacatgttaaggattccata 156  Q
    ||||| ||||||||||| ||||||||||| | |||| |||||||||||||||||||    
T  34178275 ttatataaagggtcatgttaatttgtgccctaagggcacatgttaaggattccata 34178220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 471559 - 471490
Alignment:
Q  141 tgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaatt 210  Q
    |||||| ||||  ||||||||||||||||||||| ||||| |||| ||||||| |||| | |||||||||    
T  471559 tgttaacgattttataaatggtaaatatttattataaaacattaattttcaatctctagacgaataaatt 471490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 33766191 - 33766257
Alignment:
Q  169 ttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaatttt 235  Q
    |||||||||||| |||| ||||||| | |||| |||||||||||||||| ||  || ||||||||||    
T  33766191 ttattacaaaacattaattttcaatctttaaaggaataaattgacacaattttatatacaaaatttt 33766257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 36593851 - 36593908
Alignment:
Q  153 cataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaatt 210  Q
    ||||||| |||||||||||||||||||| |||| ||||||  | | ||||||||||||    
T  36593851 cataaatagtaaatatttattacaaaacattaattttcaaccttttaaagaataaatt 36593908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 170
Target Start/End: Original strand, 33764425 - 33764457
Alignment:
Q  138 acatgttaaggattccataaatggtaaatattt 170  Q
    ||||||||||||||||||||||| |||||||||    
T  33764425 acatgttaaggattccataaatgataaatattt 33764457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 240707 - 240614
Alignment:
Q  138 acatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaa 231  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||| | || |  ||||||||| ||||| ||  |||||||||    
T  240707 acatgttaaggattccataaatgataaatatttattataaaacatttactttcaatctttagataaataaattggcacaattttttagacaaaa 240614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 22398324 - 22398393
Alignment:
Q  110 gggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaa 179  Q
    |||| ||||||| ||||||| |||| | ||||||||| ||||||||||||| ||||||||||||||||||    
T  22398324 gggttatgctaacttgtgcccttagagcacatgttaaagattccataaatgataaatatttattacaaaa 22398393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 35033664 - 35033538
Alignment:
Q  108 aagggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataa 207  Q
    |||| |||||||||  |||| ||||| || ||||||||| ||||  |||||  |||||||| ||||||||||| |||| ||| ||| |||| ||||||||    
T  35033664 aaggatcatgctaacctgtgactttaaggcacatgttaaagattttataaacagtaaatatgtattacaaaacattaatttttaatctctagaagaataa 35033565  T
Q  208 attgacacaaattcgtagacaaaattt 234  Q
    |||| ||||| ||| | || |||||||    
T  35033564 attggcacaatttccttgataaaattt 35033538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 253
Target Start/End: Original strand, 17268881 - 17268989
Alignment:
Q  144 taaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttcactttaa 243  Q
    |||||||||| |||| | |||| |||||||| ||||  |||| ||||||| |||||||||||||||   | ||| ||| |||||||||||||||||||||    
T  17268881 taaggattcc-taaacgataaacatttattataaaatattaattttcaatctctaaaagaataaatgatcgcaatttcttagacaaaattttcactttaa 17268979  T
Q  244 gatctttaac 253  Q
      ||||||||    
T  17268980 attctttaac 17268989  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 34806009 - 34805912
Alignment:
Q  143 ttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattttcactt 240  Q
    |||| ||||| ||||||| |||||||||| |||||||| |||| ||||| | |||| |||||||||||| || || ||  || ||||||||| |||||    
T  34806009 ttaaagattctataaatgataaatatttactacaaaacattaattttcattctctagaagaataaattggcataattttctaaacaaaatttccactt 34805912  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 32505765 - 32505681
Alignment:
Q  151 tccataaatggtaaatatttattacaaaact-ttaactttcaatttctaaaagaataaattgacacaaattcgtagacaaaattt 234  Q
    ||||||||||||||||||||||||||||| | |||| ||| ||| |||| || ||||||||| ||||| ||| || | |||||||    
T  32505765 tccataaatggtaaatatttattacaaaaatattaatttttaatctctagaaaaataaattggcacaatttcttaaataaaattt 32505681  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 35163048 - 35163002
Alignment:
Q  113 tcatgctaatttgtgcctttagggtacatgttaaggattccataaat 159  Q
    ||||||||| |||||||||||||||| || ||||| |||||||||||    
T  35163048 tcatgctaacttgtgcctttagggtatatattaagcattccataaat 35163002  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 7053927 - 7053997
Alignment:
Q  144 taaggattccataaatggtaaatatttat---tacaaaactttaactttcaatttctaaaagaataaattg 211  Q
    |||| ||| |||||||| |||||||||||   |||||||| |||| ||||||| ||||||| |||||||||    
T  7053927 taagaatttcataaatgataaatatttattattacaaaacattaattttcaatctctaaaaaaataaattg 7053997  T

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Target: scaffold0193 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 19998 - 20104
Alignment:
Q  111 ggtcatgctaatttgtgcctttagggtacatgttaaggattccataaatggtaaatatttattacaaaactttaactttcaatttctaaaagaataaatt 210  Q
    ||||||||||| ||||  | ||| | ||||||||||  |||  ||||||||||||||||||||||||||| |||| ||||| | | ||||| ||||| ||    
T  19998 ggtcatgctaacttgtatccttaagatacatgttaaaaattatataaatggtaaatatttattacaaaacattaattttcattatttaaaaaaataattt 20097  T
Q  211 gacacaa 217  Q
    |||||||    
T  20098 gacacaa 20104  T

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Target: scaffold0464 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 6687 - 6723
Alignment:
Q  123 ttgtgcctttagggtacatgttaaggattccataaat 159  Q
    |||||||||||| | ||||||||||||||||||||||    
T  6687 ttgtgcctttagagcacatgttaaggattccataaat 6723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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