View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3726_low_54 (Length: 350)

Name: NF3726_low_54
Description: NF3726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3726_low_54
NF3726_low_54
[»] chr1 (28 HSPs)
chr1 (1-329)||(5389424-5389752)
chr1 (1-298)||(41920234-41920530)
chr1 (1-301)||(31585763-31586063)
chr1 (1-303)||(30685907-30686209)
chr1 (1-279)||(46692822-46693100)
chr1 (1-300)||(20113524-20113823)
chr1 (1-303)||(24449933-24450235)
chr1 (1-270)||(24684481-24684748)
chr1 (1-216)||(7857518-7857731)
chr1 (1-277)||(24658731-24659007)
chr1 (3-189)||(46814472-46814656)
chr1 (1-107)||(5459133-5459239)
chr1 (4-116)||(27031846-27031958)
chr1 (1-207)||(32864564-32864771)
chr1 (19-173)||(9313310-9313463)
chr1 (19-216)||(38544759-38544954)
chr1 (24-173)||(34774779-34774925)
chr1 (10-94)||(17033571-17033655)
chr1 (1-60)||(19598655-19598714)
chr1 (1-60)||(27102210-27102269)
chr1 (156-207)||(10785489-10785540)
chr1 (25-117)||(4651742-4651834)
chr1 (159-216)||(50589365-50589422)
chr1 (18-57)||(27905434-27905473)
chr1 (145-207)||(6583337-6583399)
chr1 (10-60)||(15840924-15840974)
chr1 (19-80)||(6583237-6583298)
chr1 (24-60)||(30655579-30655615)
[»] chr7 (30 HSPs)
chr7 (1-303)||(38306037-38306339)
chr7 (1-303)||(47325888-47326190)
chr7 (1-303)||(3419659-3419962)
chr7 (1-268)||(5860291-5860558)
chr7 (1-281)||(10243985-10244260)
chr7 (1-270)||(3866926-3867194)
chr7 (1-303)||(37794777-37795067)
chr7 (1-264)||(25160630-25160893)
chr7 (5-280)||(33434909-33435183)
chr7 (2-168)||(41089752-41089918)
chr7 (1-269)||(34389771-34390040)
chr7 (1-204)||(35745830-35746031)
chr7 (10-216)||(6716748-6716953)
chr7 (1-111)||(6584877-6584987)
chr7 (1-207)||(8745026-8745231)
chr7 (10-207)||(42533264-42533460)
chr7 (42-207)||(44755500-44755663)
chr7 (10-206)||(16954527-16954722)
chr7 (1-57)||(44353567-44353623)
chr7 (10-173)||(1320701-1320863)
chr7 (10-69)||(13311849-13311908)
chr7 (12-102)||(3478329-3478419)
chr7 (10-127)||(24324810-24324927)
chr7 (1-60)||(12480905-12480965)
chr7 (10-126)||(16828948-16829064)
chr7 (25-117)||(38485518-38485610)
chr7 (21-79)||(9428128-9428186)
chr7 (10-207)||(11379139-11379335)
chr7 (22-60)||(9349768-9349806)
chr7 (10-68)||(47457034-47457092)
[»] chr8 (22 HSPs)
chr8 (1-281)||(9519297-9519577)
chr8 (1-281)||(34389008-34389288)
chr8 (1-303)||(24995398-24995700)
chr8 (1-279)||(32066298-32066576)
chr8 (2-303)||(37986862-37987164)
chr8 (1-278)||(36630638-36630915)
chr8 (127-303)||(31210319-31210496)
chr8 (1-131)||(31207365-31207494)
chr8 (10-207)||(10248565-10248761)
chr8 (1-227)||(15821382-15821606)
chr8 (1-207)||(17657005-17657209)
chr8 (3-100)||(16457466-16457562)
chr8 (4-102)||(12898280-12898378)
chr8 (1-57)||(20138448-20138504)
chr8 (4-72)||(41893406-41893474)
chr8 (1-117)||(30236131-30236247)
chr8 (1-60)||(15906705-15906764)
chr8 (1-60)||(32945706-32945765)
chr8 (30-60)||(33967345-33967375)
chr8 (30-68)||(40531243-40531281)
chr8 (10-54)||(3679471-3679515)
chr8 (24-60)||(12883497-12883533)
[»] chr4 (29 HSPs)
chr4 (1-303)||(30964217-30964519)
chr4 (1-301)||(8254805-8255105)
chr4 (1-301)||(8268223-8268523)
chr4 (3-281)||(4305523-4305801)
chr4 (1-171)||(30167567-30167736)
chr4 (1-207)||(25753045-25753250)
chr4 (1-190)||(53823424-53823612)
chr4 (10-192)||(19672989-19673169)
chr4 (1-209)||(31050665-31050871)
chr4 (10-207)||(22811172-22811367)
chr4 (10-190)||(19815236-19815415)
chr4 (27-173)||(39421042-39421187)
chr4 (1-173)||(2825691-2825861)
chr4 (1-60)||(38929846-38929905)
chr4 (8-60)||(36962626-36962677)
chr4 (4-71)||(38637238-38637305)
chr4 (9-60)||(39041285-39041336)
chr4 (10-94)||(46698797-46698881)
chr4 (10-59)||(2792286-2792335)
chr4 (10-57)||(21387216-21387263)
chr4 (30-60)||(17416541-17416571)
chr4 (1-51)||(35341341-35341391)
chr4 (14-60)||(40813797-40813843)
chr4 (13-71)||(41117982-41118040)
chr4 (19-60)||(16501750-16501791)
chr4 (31-60)||(37707388-37707417)
chr4 (1-49)||(28966897-28966945)
chr4 (1-57)||(35800511-35800567)
chr4 (20-80)||(49747526-49747586)
[»] chr2 (30 HSPs)
chr2 (1-281)||(39338868-39339148)
chr2 (1-303)||(10523873-10524179)
chr2 (1-227)||(7874145-7874369)
chr2 (35-293)||(17105197-17105456)
chr2 (2-101)||(387151-387250)
chr2 (20-209)||(14106546-14106734)
chr2 (1-189)||(1269373-1269561)
chr2 (1-116)||(14405162-14405276)
chr2 (1-68)||(13337285-13337352)
chr2 (20-207)||(37770663-37770849)
chr2 (1-60)||(4471942-4472001)
chr2 (1-60)||(22885136-22885195)
chr2 (1-60)||(16960001-16960060)
chr2 (1-60)||(34230220-34230279)
chr2 (33-207)||(41086823-41086994)
chr2 (1-57)||(7695985-7696041)
chr2 (1-60)||(2062908-2062967)
chr2 (1-60)||(10173581-10173640)
chr2 (1-60)||(15126413-15126472)
chr2 (241-278)||(7695869-7695906)
chr2 (1-58)||(16952386-16952443)
chr2 (1-58)||(17023051-17023108)
chr2 (1-58)||(17060357-17060414)
chr2 (1-58)||(17079190-17079247)
chr2 (25-118)||(27739936-27740029)
chr2 (19-60)||(33788653-33788694)
chr2 (11-60)||(42048229-42048278)
chr2 (4-60)||(5254275-5254331)
chr2 (20-80)||(23650384-23650444)
chr2 (10-58)||(37831024-37831072)
[»] chr5 (18 HSPs)
chr5 (1-303)||(698137-698439)
chr5 (1-303)||(18593019-18593321)
chr5 (1-270)||(34377907-34378176)
chr5 (5-196)||(29087364-29087555)
chr5 (19-173)||(7392052-7392205)
chr5 (1-207)||(13954237-13954441)
chr5 (1-201)||(8297347-8297546)
chr5 (10-207)||(7195251-7195447)
chr5 (19-167)||(33258903-33259050)
chr5 (19-173)||(14302451-14302604)
chr5 (20-151)||(25991936-25992066)
chr5 (22-117)||(31721639-31721734)
chr5 (14-60)||(21402853-21402899)
chr5 (19-60)||(39184208-39184249)
chr5 (1-33)||(7162320-7162352)
chr5 (1-49)||(22675327-22675375)
chr5 (1-60)||(27713088-27713147)
chr5 (1-57)||(26045967-26046023)
[»] chr3 (29 HSPs)
chr3 (1-300)||(20611562-20611861)
chr3 (1-263)||(2392509-2392771)
chr3 (1-263)||(2394256-2394518)
chr3 (1-303)||(34475757-34476058)
chr3 (1-266)||(19176316-19176580)
chr3 (66-303)||(47235492-47235729)
chr3 (1-277)||(45163651-45163933)
chr3 (2-216)||(23328354-23328564)
chr3 (10-207)||(25647557-25647753)
chr3 (1-71)||(17550965-17551035)
chr3 (1-227)||(40023575-40023799)
chr3 (2-82)||(43012372-43012452)
chr3 (1-118)||(9584056-9584173)
chr3 (10-173)||(14193846-14194009)
chr3 (19-173)||(37123289-37123442)
chr3 (1-99)||(45398776-45398874)
chr3 (19-207)||(14755286-14755471)
chr3 (1-60)||(1652889-1652948)
chr3 (1-60)||(47945725-47945784)
chr3 (10-58)||(30127283-30127332)
chr3 (19-56)||(33143970-33144007)
chr3 (19-60)||(39021297-39021338)
chr3 (35-83)||(31482880-31482928)
chr3 (10-69)||(5556580-5556639)
chr3 (10-93)||(14879421-14879504)
chr3 (1-48)||(47235729-47235776)
chr3 (10-60)||(823447-823497)
chr3 (86-196)||(4464024-4464132)
chr3 (11-59)||(31424256-31424304)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-301)||(35775-36075)
[»] chr6 (14 HSPs)
chr6 (1-267)||(3117304-3117571)
chr6 (1-302)||(16510304-16510597)
chr6 (1-207)||(20701806-20702011)
chr6 (86-209)||(15132611-15132732)
chr6 (1-218)||(32935342-32935558)
chr6 (38-207)||(3880623-3880791)
chr6 (21-60)||(26216042-26216081)
chr6 (13-60)||(34105432-34105479)
chr6 (21-60)||(12794133-12794173)
chr6 (19-78)||(9224042-9224101)
chr6 (10-57)||(13423488-13423535)
chr6 (21-60)||(26534742-26534781)
chr6 (10-55)||(33968625-33968670)
chr6 (10-54)||(32316393-32316437)
[»] scaffold0050 (1 HSPs)
scaffold0050 (13-207)||(36580-36773)
[»] scaffold0200 (1 HSPs)
scaffold0200 (1-189)||(19273-19461)
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-189)||(42141-42329)
[»] scaffold1613 (1 HSPs)
scaffold1613 (19-216)||(1038-1233)
[»] scaffold0063 (1 HSPs)
scaffold0063 (10-207)||(58000-58196)
[»] scaffold0620 (1 HSPs)
scaffold0620 (13-60)||(3849-3896)
[»] scaffold0343 (1 HSPs)
scaffold0343 (1-33)||(5751-5783)


Alignment Details
Target: chr1 (Bit Score: 305; Significance: 1e-171; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 5389424 - 5389752
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5389424 ccaaaaacaaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 5389523  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5389524 ccggtacaccagagaaaaatcaaatcaagtcaaacaaagattgcagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 5389623  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  5389624 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggcttaacacaacgttgcaagcaccctccaaact 5389723  T
Q  301 ccgattttgaatggctatagtgcttgctg 329  Q
    |||||||||||||||||||||||||||||    
T  5389724 ccgattttgaatggctatagtgcttgctg 5389752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 41920530 - 41920234
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||||||||    
T  41920530 ccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactgtagtaccaaattagcagggcacccctcgccc 41920431  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    | ||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||    
T  41920430 c-agtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaactag 41920332  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaa 298  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  || ||||||| ||||    
T  41920331 cacacaatatgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccctccaaa 41920234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 31585763 - 31586063
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||| |||    
T  31585763 ccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcaccc 31585862  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
     |||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||  |||| |||    
T  31585863 tcagtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccaaaaatcag 31585962  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    || ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||  || ||||||| ||||||    
T  31585963 caaacactatgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacataacgtgacacgcaccctccaaact 31586062  T
Q  301 c 301  Q
    |    
T  31586063 c 31586063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 30685907 - 30686209
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||   ||||||||||||||||||||| |||||||||||||||    
T  30685907 ccaaaagccaacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggcccacaagactatagtaccaaattagcagggcacccctcgccc 30686006  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    |  |||||||||||||||| ||||||||||||||||| ||||| || ||||||  ||||||||||||||||||||||||||||||||||| ||||||||     
T  30686007 caggtacaccagagaaaaaccaaatcaagtcaaacaaggattgcagttagacctcgactcccgatctcgaagccaaatgaaccggcccaccgaaaaccaa 30686106  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    |||||||||||||||| |||||||| || | ||||||||||||||||||||| ||||||||||||||||| ||||||||||  || | ||||| ||||||    
T  30686107 cacacaatatgtaagacgaaagacaaggtaagcgaagtttaaacaacaaacagatcaaaaggaaaaggctcaacacaacgtgacacgaaccctccaaact 30686206  T
Q  301 ccg 303  Q
    |||    
T  30686207 ccg 30686209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 46692822 - 46693100
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||  |||||||||  ||||||||||| ||||||| |||||||    
T  46692822 ccaaaaaccaacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccagactatatcaccaaattagcagggcacctctcgccc 46692921  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||||||||||||||||||||||||||||| | |||||||  |||||||||||||||||||||||||| |||||||| |||||| ||    
T  46692922 ccggtacaccagagaaaaatcaaatcaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaatgaatcggcccaccgaaaactag 46693021  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaac 279  Q
    ||||||||||||||||  |||||||||||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  46693022 cacacaatatgtaagacaaaagacatggcatgtgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaac 46693100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 20113524 - 20113823
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||| ||| |||||||||| ||| ||||| ||||||||| |||||| |||  ||||||||| |||||||||||| |||||||||||||||    
T  20113524 ccaaaaaccaacttaagttaaagaactgattcccgatcttgaatcaaaaatgatcgtcccagcagactataataccaaattagcagggcacccctcgccc 20113623  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || ||||||| |||||||| |||| ||  || ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||    
T  20113624 ccggtacacccgagaaaaaccaaaccatatctaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaactag 20113723  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || || | |||||  || ||||||||||||||    
T  20113724 cacacaatatgtaagatgaaagacatggcatgcaaagtttaaacaacaaacaaatcaaaaggaaaagcctcaatataacgtgacacgcacccttcaaact 20113823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 24449933 - 24450235
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||| || ||||||||||||| | |||||| |||||||||||||||||||  || |||||||||||||| |||| |||||||||||||||    
T  24449933 ccaaaaaccaacttaagacaaagaactgacttccgatctcaaatcaaaagtgatcggcccaccaaactatagtaccaaaatagcagggcacccctcgccc 24450032  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||||| |||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||  ||||||||     
T  24450033 ccggtacaccagagaaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaaccaa 24450132  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    |||| ||||||||||| |||||||||||| ||||||||||||| |||||||||||| |||||| ||| || |||||| |||  || ||||||  ||||||    
T  24450133 cacataatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatccaaaggacaagactcaacacagcgtgacacgcaccccccaaact 24450232  T
Q  301 ccg 303  Q
    |||    
T  24450233 ccg 24450235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 24684481 - 24684748
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||| ||||||||||||||||  | |||||||||| |||||||||||||||  |||||| ||| | ||||||||  |||||||||||||||    
T  24684481 ccaaaaaccaactagagtcaaagaactgacatccgatctcgaattaaaagtgatcggcccaccagactttagaatcaaattagtagggcacccctcgccc 24684580  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || ||||||||||| |||| ||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||  || |||| |||||||||    
T  24684581 ccggtacaccagag-aaaaccaaatcaagtcaaacaaagattacagctagaccccgactcccgatctcgaagccaaatgaattgg-ccaccgaaaaccag 24684678  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggct 270  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  24684679 cacacaatatgtaagacgaaagacatggcatgcgaagtttaaccaacagacaaatcacaaggaaaaggct 24684748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 7857731 - 7857518
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||| ||  |||||  ||||||| ||||||||||||||||||||||||||  |||||| ||| ||||||| ||| |||||||||||||||    
T  7857731 ccaaaaaccaacttcagcaaaagagttgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcgccc 7857632  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    |||||||||||||||| || || ||||||||||||| | |||| | |||||| |  ||||||||||||||||| |||  || |||||||||| |||||||    
T  7857631 ccagtacaccagagaacaa-catatcaagtcaaacata-attgcaactagacaccaactcccgatctcgaagcaaaaataatcggcccactggaaaccag 7857534  T
Q  201 cacacaatatgtaaga 216  Q
    ||||||||||||||||    
T  7857533 cacacaatatgtaaga 7857518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 24659007 - 24658731
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||| || |||||| |||||||| |||||||||||||||||||| |||||  |||||| ||| ||||||| ||| |||||||||| ||||    
T  24659007 ccaaaaaccaacttcagccaaagagctgactcccgatctcgaatcaaaagtgattggcccaccagactttagaaccaaatcagcagggcaccccttgccc 24658908  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    ||  |||||||||| || | || |||||||||||| | ||||| |||||||| |  ||||||||||| ||||| |||  ||||||||||| | |  ||||    
T  24658907 ccgatacaccagag-aacaccatatcaagtcaaac-atgattgcagctagacaccaactcccgatcttgaagcaaaaataaccggcccaccggactccag 24658810  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcga--agtttaaacaacaaacaaatcaaaaggaaaaggctgaacaca 277  Q
    ||||||| |||||||| || |||||||  ||||||   ||  ||| ||||||| | ||| |||||||||||| ||||||    
T  24658809 cacacaaaatgtaagacgatagacatgatatgcgattggtccaaaaaacaaactagtcacaaggaaaaggcttaacaca 24658731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 189
Target Start/End: Original strand, 46814472 - 46814656
Alignment:
Q  3 aaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccccc 102  Q
    ||||||||||||||| |||| | |||||||| ||||||||||||||||||||||||||  |||||| ||| ||||||| ||| |||||||||| ||||||    
T  46814472 aaaaaccaacttgagccaaaaagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcaccccttgccccc 46814571  T
Q  103 agtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggccca 189  Q
     ||||||||||| || | || |||||||||||| | ||||| | |||||| |  |||| |||||||||| | |||  ||||||||||    
T  46814572 ggtacaccagag-aacaccatatcaagtcaaac-aggattgcaactagacaccaactctcgatctcgaatcaaaaataaccggccca 46814656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5459239 - 5459133
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||| |||||||| ||||| || ||||||| ||||||||||||||||||||||||||  |||||||||| ||||||||||| ||| |||||||||||    
T  5459239 ccaaaaatcaacttgaatcaaataattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggtacccctcgccc 5459140  T
Q  101 ccagtac 107  Q
    || ||||    
T  5459139 ccggtac 5459133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 27031846 - 27031958
Alignment:
Q  4 aaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccccca 103  Q
    |||||||||||||| |||||| |||||||  ||||||||||||||||||||||||||   ||||| ||| ||||||| ||| ||||||||||  |||||     
T  27031846 aaaaccaacttgagccaaagagctgactctcgatctcgaatcaaaagtgatcggcccactagactttagaaccaaatcagcagggcacccctttcccccg 27031945  T
Q  104 gtacaccagagaa 116  Q
    |||||||||||||    
T  27031946 gtacaccagagaa 27031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 32864564 - 32864771
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| | ||||||||||||||||| |||| | |||||||||| ||||||||| |||||  ||| || ||| |||||||  |  ||||||||||| |||    
T  32864564 ccaaaaccaaacttgagtcaaagaaccgacttccgatctcgaattaaaagtgattggcccaccagcctttaggaccaaatcggaagggcacccctcaccc 32864663  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggccca-ctgaaaacca 199  Q
     ||||| | |||| ||| | ||||| ||| ||||  |||||||||||||||| | |||||| ||| ||||||| |||  |||||||||| | |||||| |    
T  32864664 tcagtagatcagataaacaccaaataaagccaaaacaagattgtagctagacaccgactcctgatttcgaagcaaaagtaaccggcccaccggaaaacta 32864763  T
Q  200 gcacacaa 207  Q
    ||||||||    
T  32864764 gcacacaa 32864771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 9313310 - 9313463
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaa 118  Q
    ||||||||||||||| ||||||||||||||||||||| ||||   ||||| ||| ||||||| ||  ||||||||||| | |||  ||||| |||||||     
T  9313310 caaagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaatcagaagggcacccctcacgcccgatacacgagagaaac 9313409  T
Q  119 atcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagc 173  Q
    | ||||||| | |||||||| |||| |||||||| |  |||||||||||||||||    
T  9313410 accaaatcacggcaaacaaa-attgcagctagacaccaactcccgatctcgaagc 9313463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 38544759 - 38544954
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaa 118  Q
    ||||||||||||||| |||||||||||||||| |||||||||  ||||||  |  ||||||| ||  ||| |||||||   |||||| |||||||||||     
T  38544759 caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtccaccagagaaac 38544857  T
Q  119 atc-aaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaatatgtaaga 216  Q
    | | ||||||| |||||| ||||||| |||||||| |  |||||| |||||||||| |||  || |||||||||  || ||||||||||||||||||||    
T  38544858 accaaaatcaa-tcaaac-aagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaaga 38544954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 34774925 - 34774779
Alignment:
Q  24 aactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaaatcaa 123  Q
    |||||||||| |||||||| |||||||||||||| ||  |||||  ||| ||||||| ||  ||||||| ||| ||||| ||| || ||||||| |||||    
T  34774925 aactgactcccgatctcga-tcaaaagtgatcggtccaccagacgttaggaccaaatcagaagggcaccactcaccccc-gtatactagagaaacatcaa 34774828  T
Q  124 atcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagc 173  Q
    |||||| ||||| |||||||||| ||||| | |||||||| |||||||||    
T  34774827 atcaagccaaac-aagattgtagttagacaccgactcccgttctcgaagc 34774779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 17033655 - 17033571
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccc 94  Q
    |||||||  ||||||||||||||| |||||||| |||||||||||||||||  |||||||||| ||||||| ||  |||||||||    
T  17033655 aacttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaatcagaagggcacccc 17033571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 19598714 - 19598655
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | |||||||||||||||||||||||  |||||||||||||||| |||||||||    
T  19598714 ccaaaatcaaacttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggccc 19598655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27102269 - 27102210
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | |||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  27102269 ccaaaaccaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggccc 27102210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 10785489 - 10785540
Alignment:
Q  156 gactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
    |||||||||||||||||| |||| ||||||||||| | ||||||||||||||    
T  10785489 gactcccgatctcgaagcaaaattaaccggcccaccggaaaccagcacacaa 10785540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 4651834 - 4651742
Alignment:
Q  25 actgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaatt-agctgggcacccctcgcccccagtacaccagagaaa 117  Q
    ||||||||| ||||||||||||||||||||||||||  |||||| | | | |||||| ||  ||||||||||  ||||| ||||||||||||||    
T  4651834 actgactcccgatctcgaatcaaaagtgatcggccccccagact-tcggaacaaattcagaagggcaccccttacccccggtacaccagagaaa 4651742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 50589365 - 50589422
Alignment:
Q  159 tcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaatatgtaaga 216  Q
    ||||||||||||||| |||| |||||||||||   || ||||||||||||||||||||    
T  50589365 tcccgatctcgaagcaaaattaaccggcccaccagaatccagcacacaatatgtaaga 50589422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 27905473 - 27905434
Alignment:
Q  18 tcaaagaactgactcctgatctcgaatcaaaagtgatcgg 57  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  27905473 tcaaagaactaacttctgatctcgaatcaaaagtgatcgg 27905434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 6583337 - 6583399
Alignment:
Q  145 agctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
    |||||||| | |||||||||||||||||| |||  ||||||||||| || ||||| |||||||    
T  6583337 agctagacaccgactcccgatctcgaagcaaaagtaaccggcccaccgacaaccaacacacaa 6583399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 15840924 - 15840974
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    ||||||| ||||  |||||||||| ||||||||||||||||||||| ||||    
T  15840924 aacttgaatcaagaaactgactcccgatctcgaatcaaaagtgatcagccc 15840974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 6583237 - 6583298
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaat 80  Q
    ||||||| ||||| | ||||||||||||||||||||||| ||  |||||| ||| |||||||    
T  6583237 caaagaattgactgccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaat 6583298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 30655615 - 30655579
Alignment:
Q  24 aactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||||||| |||||||||||||||| |||||||||    
T  30655615 aactgactcccgatctcgaatcaaaagcgatcggccc 30655579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 38306339 - 38306037
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  38306339 ccaaaaaccaacttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcgccc 38306240  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| |||||||||    
T  38306239 cctgtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgttctcgaagccaaatgaaccggcccaccgaaaaccag 38306140  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  38306139 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgttgcaagcaccctccaaact 38306040  T
Q  301 ccg 303  Q
    |||    
T  38306039 ccg 38306037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 47325888 - 47326190
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||||||| |||||||||  ||||||||||||||||||||||  ||||||||||||||    
T  47325888 ccaaaaaccaacttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccaccagactatagtaccaaattagcaaggcacccctcgccc 47325987  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||||| |||||||||| ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  47325988 ccggtacaccagagaaaaaccaaatcaagttaaacaaagattgctgctagaccccgactcccgatctcgaagccaaatgaaccggcccatcgaaaaccag 47326087  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  || ||||||| ||||||    
T  47326088 cacacaatatgtaagaagaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccctccaaact 47326187  T
Q  301 ccg 303  Q
    |||    
T  47326188 ccg 47326190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 3419659 - 3419962
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||  || ||| ||||||||||||| | |||||||||||||||    
T  3419659 ccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccacactttagtaccaaattaacagggcacccctcgccc 3419758  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || ||| |||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| | | |||||||||    
T  3419759 ccggtataccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggctcgccgaaaaccag 3419858  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacac-aacgttgcaagcacccttcaaac 299  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||||  || ||||||| |||||    
T  3419859 cacacaatatgtaagacgaaagacatggcatgtgaagtttaaacaacaaacaaatcaaaaggaaagggctcaacacaaacgtgacacgcaccctccaaac 3419958  T
Q  300 tccg 303  Q
    ||||    
T  3419959 tccg 3419962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 5860291 - 5860558
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||||| ||| |||||  | |||||||||||||||||||| |||||||||||||||    
T  5860291 ccaaaaaccaacttgcgtcaaagaattgactcccgatctcgaatcaaaagcgataggcccaccggactatagtaccaaattagcagggcacccctcgccc 5860390  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||  ||||||||| |||||  || ||||||||||||| || ||||||  ||||||||||||||||||||||||||||||||||  |||||||||    
T  5860391 ccggtacagtagagaaaaaccaaattcagccaaacaaagattgcagatagacctcgactcccgatctcgaagccaaatgaaccggcccatcgaaaaccag 5860490  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaagg 268  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  5860491 cacacaatatgtaagacgaaagacatggcgagcgaagtttaaacaacaaacaaatcaaaaggagaagg 5860558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 10244260 - 10243985
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||  |||| ||||| ||||||||||| ||||||||||| |||    
T  10244260 ccaaaaactaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagattatagcaccaaattagcagggcacccctctccc 10244161  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||||| |||||| | |||||||||||||| | ||||| || |||||||||||||||||||||||||||| ||| || |||||||||    
T  10244160 ccggtacaccagagaaaaaccaaatcta-tcaaacaaagattgcaactagatcccgactcccgatctcgaagccaaatgaaccagccaaccgaaaaccag 10244062  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgt 281  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||||   |||| ||||||||| || |||||||    
T  10244061 cacacaatatgtaagacgaaa-acatggcatgcgaagtttgaacaacaaacaa---aaaaagaaaaggctcaaaacaacgt 10243985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 3867194 - 3866926
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||  || | | ||||||||||||||| || ||||| ||||||    
T  3867194 ccaaaaaccaacttgagtcaaagaactgactcccggtctcgaatcaaaagtgatcagcccaccatattttagtaccaaattagcaggccacccttcgccc 3867095  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
     | |||||||||||||||| || ||||||||||||||||||||||||||||||| ||||| |||||||||||| |||  || || ||||| | |||||||    
T  3867094 tcggtacaccagagaaaaaccatatcaagtcaaacaaagattgtagctagaccccgactctcgatctcgaagcaaaagtaatcgacccaccg-aaaccag 3866996  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggct 270  Q
     ||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  3866995 gacacaatatgtaagacgaaagacgtggcatgtgaagtttaaacaacaaataaatcaaaaggaaaaggct 3866926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 37795067 - 37794777
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||| ||| ||||||  || |||||| |||||||||||| |||||||||||||||    
T  37795067 ccaaaaaccaacttgactcaaagaactgactcccgatctcgaatcaaaactgaacggcccaccatactatattaccaaattagcagggcacccctcgccc 37794968  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || ||||||||           ||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| |||||||||    
T  37794967 ccggtacacca-----------aatcaagtcaaacaaagattgcagctagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaaccag 37794879  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    |||||||||||||| |  |||| |  |||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||  ||  |||||||||||||    
T  37794878 cacacaatatgtaaaacaaaagtc-cggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaatgctcaacacaatgtgacacacacccttcaaact 37794780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 25160893 - 25160630
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||| | |  ||||  ||||| | ||||||||||||||||| ||||| ||  |||||||||| ||||||||||| |||||||||||||||    
T  25160893 ccaaaaaccaacttaatttcaagatttgacttccgatctcgaatcaaaagtaatcggtccaccagactatagaaccaaattagcagggcacccctcgccc 25160794  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
     | |||||||||||||||| |||| ||||||||||||| || | | |||||||| ||||||||||| | |||||||||||| |  ||||| |||||||||    
T  25160793 tcggtacaccagagaaaaaccaaaccaagtcaaacaaaaatagcaactagaccccgactcccgatcccaaagccaaatgaatcatcccaccgaaaaccag 25160694  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaa 264  Q
     |||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||    
T  25160693 tacacaatatgtaagacaaaagacatggcatgcgtagtttaaacaacaaacaaatcaaaaggaa 25160630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 5 - 280
Target Start/End: Complemental strand, 33435183 - 33434909
Alignment:
Q  5 aaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccag 104  Q
    |||| |||||||| ||||||||||||||| |||||||||||||||||||||| | |  |||||| ||||||||||||| | ||||||||||||||||| |    
T  33435183 aaacgaacttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgtctcaccagactttagtaccaaattaacagggcacccctcgcccccgg 33435084  T
Q  105 tacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcaca 204  Q
    |||||||||| |||| |||||||||  |||||||||||  | ||||||||||||| ||||||||||||| |||  || |||||||| | |||||| ||||    
T  33435083 tacaccagag-aaaaccaaatcaagctaaacaaagattacaactagacccggactaccgatctcgaagcaaaagtaatcggcccaccggaaaccaacaca 33434985  T
Q  205 caatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacg 280  Q
    |||||||||| | ||| |||||||||||| ||||||||||||| |||  ||| |||||||||||||  ||||||||    
T  33434984 caatatgtaatacgaatgacatggcatgcaaagtttaaacaaccaacctatcgaaaggaaaaggctcgacacaacg 33434909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 41089752 - 41089918
Alignment:
Q  2 caaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccc 101  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||  |||||| ||||||||||||||| | ||||||||||||||    
T  41089752 caaaaaccaacttgagtcaaagagctgactcccaatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagagcacccctcgcccc 41089851  T
Q  102 cagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctc 168  Q
    |  ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| |||||||    
T  41089852 cgatacaccagagaaaaaccaaatcaagtcaaacaaagattgtagctagaccccaactctcgatctc 41089918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 34390040 - 34389771
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||| || |||||| |||||||| ||||||||||||||||||||||||||  |||||| ||  ||||||| ||| |||||| |||| |||    
T  34390040 ccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttaaaaccaaatcagcagggcactcctcaccc 34389941  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    |||||||||||||||| |  || |||||||||||  | ||||| | |||||| |  ||| | ||||||||||| |||  ||| ||||||    | |||||    
T  34389940 ccagtacaccagagaacac-catatcaagtcaaaacatgattgcaactagacaccaacttctgatctcgaagcaaaaataactggcccatcagacaccag 34389842  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcga--agtttaaacaacaaacaaatcaaaaggaaaaggc 269  Q
    ||||||||||||| || || |||||||  ||||||   ||  ||||||||| ||||| |||||||||||||    
T  34389841 cacacaatatgtacgacgatagacatgatatgcgattggtgcaaacaacaagcaaatgaaaaggaaaaggc 34389771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 35745830 - 35746031
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| |||| ||||||| ||| || |||||||  |||||||||||||||    
T  35745830 ccaaaaaccaacttgagccaaagagatgacttccgatctcgaatcaaaagtgatcagcccatcagactttagaacaaaattagtagggcacccctcgccc 35745929  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || ||||| ||||| || | || |||||||||||| |||||||  ||||| | |  ||| ||||||||||||| |||  |||||| |||| ||||||||     
T  35745930 ccggtacatcagag-aacaccatatcaagtcaaac-aagattgctgctagtcaccaacttccgatctcgaagcaaaagtaaccggtccaccgaaaaccaa 35746027  T
Q  201 caca 204  Q
    ||||    
T  35746028 caca 35746031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 216
Target Start/End: Original strand, 6716748 - 6716953
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||   |||||| ||  |  |||| ||  ||||||||||| | | | ||||||    
T  6716748 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagactttatgattaaatcagaagggcacccctcactctcggtacac 6716847  T
Q  110 cagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaata 209  Q
    |||||||| ||||||||||| |||| || ||||| |||||||| | ||||||||||||| |||  |||  ||| ||||||| |||||||||||| ||| |    
T  6716848 cagagaaacatcaaatcaagccaaataa-gattgcagctagacaccgactcccgatctcaaagtaaaagtaactggcccaccgaaaaccagcacgcaaaa 6716946  T
Q  210 tgtaaga 216  Q
     ||||||    
T  6716947 agtaaga 6716953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 6584987 - 6584877
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||| || |||||| |||||||| ||||||||||||||||||||||||||  |||||| ||| ||||||| ||| ||||||||||||||     
T  6584987 ccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcgcct 6584888  T
Q  101 ccagtacacca 111  Q
    || ||||||||    
T  6584887 ccggtacacca 6584877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 8745231 - 8745026
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| | |||||||  ||| ||||||| ||| ||||||||||||||||||||||||||  |||| | ||| ||||||| ||  || |||||||| |||    
T  8745231 ccaaaaccaaacttgatccaacgaactgaatcccgatctcgaatcaaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacccctcaccc 8745132  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
     | || ||||||||||| | || ||||   ||||| || |||| |||||||| | | || ||||||||||||| |||  ||||||||||| |||||||||    
T  8745131 tcggtgcaccagagaaacaccagatcacaccaaac-aacattgcagctagacaccgccttccgatctcgaagcaaaagtaaccggcccaccgaaaaccag 8745033  T
Q  201 cacacaa 207  Q
    |||||||    
T  8745032 cacacaa 8745026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 207
Target Start/End: Original strand, 42533264 - 42533460
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    ||||| || ||||| | ||||||| ||||||||||||||||||||| ||||  |||||| ||| ||||||| ||  ||||||||||| |||||  | |||    
T  42533264 aacttaagccaaaggattgactcccgatctcgaatcaaaagtgatcagcccaccagactttaggaccaaatcaggagggcacccctcacccccgatgcac 42533363  T
Q  110 cagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
    |||||||| | || |||  | ||||  |||| || |||| ||| | |||||||||||||||||| |||  ||||||||||  | | ||||||||||||    
T  42533364 cagagaaacaccacatcgcgccaaa-taagaatgcagctggacacagactcccgatctcgaagcaaaagtaaccggcccatcggagaccagcacacaa 42533460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 207
Target Start/End: Complemental strand, 44755663 - 44755500
Alignment:
Q  42 aatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaaatcaaatcaagtcaaacaaagat 141  Q
    |||||||||||||||||||  |||||| ||| ||||||| ||  |||||||||||  || | |||||||||||||| | ||||||| |||||||||| ||    
T  44755663 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctc-accacggtacaccagagaaacaccaaatcacgtcaaacaaa-at 44755566  T
Q  142 tgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
     | |||||||| | ||||||||| ||| |||| |||| ||  ||||||| |  |||||||||||||    
T  44755565 agcagctagacaccgactcccgacctcaaagcaaaattaatgggcccaccgctaaccagcacacaa 44755500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 16954722 - 16954527
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    ||||||||||||||||||||||   ||||||||| ||||||||||||| |   |||||| ||| ||||||| ||  ||||||||||| || |   |||||    
T  16954722 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaatcagaagggcacccctcacctctgatacac 16954623  T
Q  110 cagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacaca 206  Q
    |||||||| | ||||||  | | ||| ||||||| |||||||| |  |||| |||||| ||||| |||  || |||||||  | |||||||||||||    
T  16954622 cagagaaagaccaaatcgcg-ccaaccaagattgcagctagacaccaactctcgatctggaagcaaaagtaatcggcccatcggaaaccagcacaca 16954527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44353567 - 44353623
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcgg 57  Q
    |||||||||||| | |||||||||||||||||| |||||| ||||||||||||||||    
T  44353567 ccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 44353623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 1320863 - 1320701
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    |||||||| ||||||||||||| | ||| | ||||||||||||||||||||  |||||| ||  ||||||| |   ||||||||||| |||||  ||||     
T  1320863 aacttgagccaaagaactgacttccgattttgaatcaaaagtgatcggcccaccagactttatgaccaaatcaaaagggcacccctcacccccgatacat 1320764  T
Q  110 cagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagc 173  Q
    |||||||| | |||||   | |||||||| |||  |||||||| |  |||||||||||||||||    
T  1320763 cagagaaacaccaaattgcgccaaacaaa-attacagctagacaccaactcccgatctcgaagc 1320701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 13311908 - 13311849
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagacta 69  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  13311908 aacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacta 13311849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 3478419 - 3478329
Alignment:
Q  12 cttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccccc 102  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||||||||  || ||| ||| ||||||  ||  ||||||||||| |||||    
T  3478419 cttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccaaactttaggaccaaaacagaagggcacccctcaccccc 3478329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 24324810 - 24324927
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    |||||||| ||||||| ||||||| ||||||||||||||| ||||||||||  || ||| ||  ||||||| ||  ||||||||||   |||| ||||||    
T  24324810 aacttgagccaaagaattgactcccgatctcgaatcaaaattgatcggcccaccaaactttaagaccaaatcagaagggcacccctaaaccccggtacac 24324909  T
Q  110 cagagaaaaatcaaatca 127  Q
    || ||||| | |||||||    
T  24324910 caaagaaacaccaaatca 24324927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 12480965 - 12480905
Alignment:
Q  1 ccaaaaaccaa-cttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    ||||||||||| |||||  ||||||||||||||| |||||||||||||||| |||||||||    
T  12480965 ccaaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcggccc 12480905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 16828948 - 16829064
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    ||||||||||||||||||||||   ||||||||| ||||||||||| |||   |||||| ||| ||||||| ||  ||||||||||| ||||   |||||    
T  16828948 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaatcagaagggcacccctcacccctgatacac 16829047  T
Q  110 cagagaaaaatcaaatc 126  Q
     ||||||| | ||||||    
T  16829048 tagagaaacaccaaatc 16829064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 38485610 - 38485518
Alignment:
Q  25 actgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaa 117  Q
    ||||||||| ||||||||||||||||||||||||||  ||||||  || || || | ||  ||||||||||  |||||||| |||||||||||    
T  38485610 actgactcccgatctcgaatcaaaagtgatcggcccaccagacttcagaacaaattcagaagggcaccccttacccccagtccaccagagaaa 38485518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 9428128 - 9428186
Alignment:
Q  21 aagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaa 79  Q
    ||||||||||| |||||||||||||||||||||||||| |  ||||||| || ||||||    
T  9428128 aagaactgacttctgatctcgaatcaaaagtgatcggctcaccagactacaggaccaaa 9428186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 207
Target Start/End: Original strand, 11379139 - 11379335
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    |||||||  ||||| ||||||||| |||||||||||||||| ||||||| |  ||||||| |  ||||||||||  |||||||||   ||| | || |||    
T  11379139 aacttgaaccaaagtactgactcccgatctcgaatcaaaagcgatcggctcaccagactacatgaccaaattagaagggcaccccaaaccctcggtccac 11379238  T
Q  110 cagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
    |||||||| | |  |   || ||||| |||||||||||||||| |  ||||||||||| ||| | |||  ||||| ||||||  || |||||||||||    
T  11379239 cagagaaacaccgtagtcagccaaac-aagattgtagctagacaccaactcccgatcttgaatcaaaaataaccgacccactagaatccagcacacaa 11379335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 9349806 - 9349768
Alignment:
Q  22 agaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  9349806 agaattgactcccgatctcgaatcaaaagtgatcggccc 9349768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 47457034 - 47457092
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagact 68  Q
    |||||||| |||||||||||||||  ||||| ||||||||| |||||| || |||||||    
T  47457034 aacttgagccaaagaactgactcccaatctcaaatcaaaagcgatcggtccatcagact 47457092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 9519577 - 9519297
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||   ||||||||||||||||||||| ||||||||||| |||    
T  9519577 ccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaactgatcggcccactagactatagtaccaaattagcagggcacccctcaccc 9519478  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  9519477 ccggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctactgaaaaccag 9519378  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgt 281  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  9519377 cacacaatatgtaagacgaaagaaatggcatgcgaagtttaaacaacaaacaaataaaaaggaaaaggctcaacacaacgt 9519297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 34389008 - 34389288
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  34389008 ccaaaaaccaacttgagtcaaagaactgactcttgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcgccc 34389107  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    |  |||||||||||||||| |||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| |  |||||||||    
T  34389108 ctggtacaccagagaaaaaccaaatcaagtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctatcgaaaaccag 34389207  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgt 281  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34389208 cacacaatatgtaagacgaaagacatggcatgtgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgt 34389288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 24995398 - 24995700
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||  | ||||||||||||    
T  24995398 ccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcaagacacccctcgccc 24995497  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  24995498 ccagtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaaccag 24995597  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    |||||||||||||||| |||| |||| |||| |||||||||||||||||| ||||||||||||||| ||| ||||||| ||  ||| |||| | ||||||    
T  24995598 cacacaatatgtaagacgaaaaacatagcatacgaagtttaaacaacaaataaatcaaaaggaaaatgctcaacacaatgtgacaaccaccgtccaaact 24995697  T
Q  301 ccg 303  Q
    |||    
T  24995698 ccg 24995700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 32066298 - 32066576
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||| |||||||||| |||||||| ||| ||||||||||||||||||||||  |||||||||| ||||||||||| |||||||||||||||    
T  32066298 ccaaaaaccaactggagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcgccc 32066397  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||| ||||||||| ||||||||||||||||||||||| | |||||||| || |||||||||| ||||||||||||||||||||| |||||||||    
T  32066398 ccggtacactagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcaaagccaaatgaaccggcccaccgaaaaccag 32066497  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaac 279  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  32066498 cacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaac 32066576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 2 - 303
Target Start/End: Original strand, 37986862 - 37987164
Alignment:
Q  2 caaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccc 101  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||  |||||||||  ||||||||||| ||||||||||||||||    
T  37986862 caaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaaatgattggcccaccagactataacaccaaattagcagggcacccctcgcccc 37986961  T
Q  102 cagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagc 201  Q
    | |||||||||||||||| |||||||||||||| ||||| || | |||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  37986962 cggtacaccagagaaaaaccaaatcaagtcaaataaagaatgcaactagaccccgactaccgatctcgaagccaaatgaaccggcccaccgaaaaccagc 37987061  T
Q  202 acacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggct-gaacacaacgttgcaagcacccttcaaact 300  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||  || ||||||| | ||||    
T  37987062 acacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaaacacaacgtgacacgcaccctcctaact 37987161  T
Q  301 ccg 303  Q
    |||    
T  37987162 ccg 37987164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 36630915 - 36630638
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||| |||| |||||||||||||||| || |||||||||| |||||||||||||||  |||||| ||| ||||||||||| |||||||||||||||    
T  36630915 ccaaaaacaaactagagtcaaagaactgacacccgatctcgaattaaaagtgatcggcccaccagactttagaaccaaattagcagggcacccctcgccc 36630816  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||| ||||||| ||||||||||||||||||||||| |||||||||  | |||||||||||||||||||||||||||||| || ||||||||     
T  36630815 ccggtacaccaaagaaaaaccaaatcaagtcaaacaaagattgcagctagacctcgtctcccgatctcgaagccaaatgaaccggcctaccgaaaaccaa 36630716  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaa 278  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| | |||||||    
T  36630715 cacacaatatgtaagacgaaagacatggcatgcgaagtttaaccaacaaacaaatcacaaggaaaaggttcaacacaa 36630638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 127 - 303
Target Start/End: Original strand, 31210319 - 31210496
Alignment:
Q  127 aagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa-tatgtaagatgaaagaca 225  Q
    ||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| ||||| ||||||||| ||||||||    
T  31210319 aagtcaaacaaagattgcagctagaccctgactcccgatcttgaagccaaatgaaccggcccaccgaaaaccagcgcacaaatatgtaagacgaaagaca 31210418  T
Q  226 tggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaactccg 303  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  || ||||||| | |||||||    
T  31210419 tggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccctccgaactccg 31210496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 31207365 - 31207494
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||    
T  31207365 ccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggca-ccctcgccc 31207463  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtc 131  Q
    |  |||||||||||||||| |||||||||||    
T  31207464 ctggtacaccagagaaaaaccaaatcaagtc 31207494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 207
Target Start/End: Original strand, 10248565 - 10248761
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||||||| ||  || | | ||| || |||||||  || |||||||| ||||| ||||||    
T  10248565 aacttgagccaaagaactgactcccgatcttgaatcaaaagtgatcggtccaccaaattttaggacaaaattagaaggacacccctcacccccggtacac 10248664  T
Q  110 cagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
    |||||||| | ||||||||| |||||||| |||| |||||||| | |||||||||||||||||| |||  ||| ||||||| | |||||| |||||||    
T  10248665 cagagaaacaccaaatcaagccaaacaaa-attgcagctagacaccgactcccgatctcgaagcaaaagtaactggcccaccggaaaccaccacacaa 10248761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 15821382 - 15821606
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||| | ||||||||| |||||||| ||||||||||||||||||||| ||||  |||||| ||| ||||||| ||| |||||||||||||||    
T  15821382 ccaaaaaccaacataagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccagactttagaaccaaatcagcagggcacccctcgccc 15821481  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
     | ||||||||||||| |  || |||||| ||||||  |||||||||||| | |  ||| |||||||| |||  |||  || ||||||||   | ||||     
T  15821482 tcggtacaccagagaacac-catatcaagccaaacag-gattgtagctaggcaccaacttccgatctcaaagaaaaaataatcggcccaccagataccaa 15821579  T
Q  201 cacacaatatgtaagatgaaagacatg 227  Q
    |||||||||||||||| || |||||||    
T  15821580 cacacaatatgtaagacgatagacatg 15821606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 17657005 - 17657209
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| | |||||||| ||||||||||||||| |||||||||||||||||||||| |||  || ||| |||  |||| ||||  |||||||||||   |    
T  17657005 ccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgacccaccatactttaggtccaacttagaagggcacccctc-atc 17657103  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || ||||| |||||||| | ||||||| | ||||  |||||||||||||| | | |||||||||||||||||| |||| ||||||||||  | ||||||     
T  17657104 ccggtacatcagagaaacaccaaatcacgccaaa-taagattgtagctagccaccgactcccgatctcgaagcaaaattaaccggcccatcggaaaccaa 17657202  T
Q  201 cacacaa 207  Q
    |||||||    
T  17657203 cacacaa 17657209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 16457466 - 16457562
Alignment:
Q  3 aaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||  || ||||||||| ||||||||| || ||||||||||||    
T  16457466 aaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgg-ccaccaaactatagtatcaaattagcaggacacccctcgccc 16457562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 12898280 - 12898378
Alignment:
Q  4 aaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccccc 102  Q
    ||||||||||||||| | | |||||||||| |||||||||||||||||||||||  |  ||||||||| ||||||||||   |||||||||||||||||    
T  12898280 aaaaccaacttgagttagataactgactccggatctcgaatcaaaagtgatcgggtcaccagactatattaccaaattaatagggcacccctcgccccc 12898378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20138504 - 20138448
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcgg 57  Q
    |||||||||||| | |||||||||||||||||| |||||| ||||||||||||||||    
T  20138504 ccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 20138448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 41893406 - 41893474
Alignment:
Q  4 aaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatag 72  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||||||| | |||||  ||||||||||    
T  41893406 aaaaacaacttgagacaaagaactgactcccgatctcgaatcaaaagtggttggcccaccagactatag 41893474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30236131 - 30236247
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| | |||||||  ||||||||||||||| |||||||||||||||| ||||| |||  ||||||  |  ||||||| ||  ||||||||||  |||    
T  30236131 ccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagacttcaaaaccaaatcagaagggcaccccttaccc 30236230  T
Q  101 ccagtacaccagagaaa 117  Q
    || || |||||||||||    
T  30236231 ccggtccaccagagaaa 30236247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15906764 - 15906705
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | |||||||  ||||||||||||||| |||||||||||||| |||||||||||    
T  15906764 ccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaatgtgatcggccc 15906705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 32945706 - 32945765
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | ||||||| |||||||| ||||||| ||||||||||||||||||||| ||||    
T  32945706 ccaaaaccaaacttgaatcaaagaattgactcccgatctcgaatcaaaagtgatcagccc 32945765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 60
Target Start/End: Complemental strand, 33967375 - 33967345
Alignment:
Q  30 ctcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||||||||||||||||||||||||||||    
T  33967375 ctcctgatctcgaatcaaaagtgatcggccc 33967345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 40531281 - 40531243
Alignment:
Q  30 ctcctgatctcgaatcaaaagtgatcggcccttcagact 68  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  40531281 ctcccgatctcgaatcaaaagtgatcggcccatcagact 40531243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 3679515 - 3679471
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgat 54  Q
    ||||||| |||||| || |||||| ||||||||||||||||||||    
T  3679515 aacttgaatcaaagcaccgactcccgatctcgaatcaaaagtgat 3679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 12883533 - 12883497
Alignment:
Q  24 aactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||| |||||||||||||||||||||| |||||||||    
T  12883533 aactaactcctgatctcgaatcaaaagcgatcggccc 12883497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 30964519 - 30964217
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  30964519 ccaaaaaccaacttgagtcaaagaacggactcccgatcacgaatcaaaagtgatcggcccatcagattatagtaccaaattagcagggcacccctcgccc 30964420  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
     | |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||  |||||||||    
T  30964419 tcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgacttccgatctcgaagccaaatgaaccggcccatcgaaaaccag 30964320  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||  || ||||||| ||||||    
T  30964319 cacacaataagtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggttcaacacaacgtgacacgcaccctccaaact 30964220  T
Q  301 ccg 303  Q
    |||    
T  30964219 ccg 30964217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 8255105 - 8254805
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  |||||| ||||||||||||||| |||||||||||||||    
T  8255105 ccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctcgccc 8255006  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||||| |||||||||| |||||||||||  |||||||||  |||||||||||||||||||||| |||||||||||| ||||||||     
T  8255005 ccggtacaccagagaaaaaccaaatcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaaaaccaa 8254906  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||| |   || ||||||||||||||    
T  8254905 cacacaatatgtaagacgaaagacatggcatgcaaagtttaaacaacaaacgaatcaaaaggaaaaggctcaacacaaagcgacacgcacccttcaaact 8254806  T
Q  301 c 301  Q
    |    
T  8254805 c 8254805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 8268523 - 8268223
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  |||||| ||||||||||||||| |||||||||||||||    
T  8268523 ccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctcgccc 8268424  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||||| |||||||||| |||||||||||  |||||||||  |||||||||||||||||||||| |||||||||||| ||||||||     
T  8268423 ccggtacaccagagaaaaaccaaatcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaaaaccaa 8268324  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||| |   || ||||||||||||||    
T  8268323 cacacaatatgtaagacgaaagacatggcatgcaaagtttaaacaacaaacgaatcaaaaggaaaaggctcaacacaaagcgacacgcacccttcaaact 8268224  T
Q  301 c 301  Q
    |    
T  8268223 c 8268223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 3 - 281
Target Start/End: Complemental strand, 4305801 - 4305523
Alignment:
Q  3 aaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccccc 102  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||| |||  |||||||||||||||||||||| ||||||| || ||||||    
T  4305801 aaaaaccaacttgagacaaagaactaactcccgatctcgaatcaaaagtgatcgccccaccagactatagtaccaaattagcagggcaccgcttgccccc 4305702  T
Q  103 agtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagca 202  Q
     ||||||||||||||||  ||||| |||||||||||||||| | |||| ||| ||||||||||||||||||||||||||||||||||| ||||||||| |    
T  4305701 ggtacaccagagaaaaacgaaatccagtcaaacaaagattgcaactagcccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaaccagta 4305602  T
Q  203 cacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgt 281  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  4305601 cacaatatgtaagacaaaagacatggcaagcgaagtttaaacaacaaacaaaactaaaggaaaaggctcaacacaacgt 4305523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 30167567 - 30167736
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||||||||||||| |||    ||||||| ||||||||  || ||||||||||| |||    
T  30167567 ccaaaaatcaacttgagtcaaagaaccgactcccgatctcgaatcaaaagtgatcgacccacttgactataataccaaataggcagggcacccctcaccc 30167666  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaa 171  Q
    |  | ||| || ||||||   ||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  30167667 cg-gcacatcaaagaaaacctaaatcaaatcaaacaaagattgtagctagaccccgactcccgatctcgaa 30167736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 25753250 - 25753045
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| | |||||||| ||||||||||||||| |||||||||||||||||||||| |||  |||||| ||| ||||||| ||  |||||| |||| ||     
T  25753250 ccaaaatcaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgccccaccagactttaggaccaaataagacgggcactcctcacct 25753151  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||| | || |||| | ||||| ||||||| |||||||| | |||||||||||||||||| |||| || | |||||  | |||||||    
T  25753150 ccggtacaccagagaaacaccacatcacgccaaac-aagattgcagctagacaccgactcccgatctcgaagcaaaattaagctgcccatcggaaaccag 25753052  T
Q  201 cacacaa 207  Q
    || ||||    
T  25753051 caaacaa 25753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 53823424 - 53823612
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| | |||||||| ||||||||||||||| |||||||||||||||||||| || ||  |||||| ||  ||||||| ||  ||||||||||| ||     
T  53823424 ccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgattggtccaccagactttatgaccaaatcagaagggcacccctcacct 53823523  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccac 190  Q
    || |||||||||||||| | ||| ||||| ||| | ||||||| || ||||| | |||||||||||||||||| |||  |||||||||||    
T  53823524 ccggtacaccagagaaacaccaagtcaagccaagc-aagattgcagttagacaccgactcccgatctcgaagcaaaagtaaccggcccac 53823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 19673169 - 19672989
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||  || ||  |||||| ||| ||||||  ||  ||||||||||| |||||  |  ||    
T  19673169 aacttgagccaaagaactgactcctgatctcgaat-aaaagggaatggtccaccagactttaggaccaaaacagaagggcacccctcacccccgatcaac 19673071  T
Q  110 cagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactg 192  Q
    |||||||| |||| |||||| ||||||| ||||| |||||||| | |||||||||||||||||| |||  |||||||||||||    
T  19673070 cagagaaatatcatatcaagccaaacaa-gattgcagctagacactgactcccgatctcgaagcaaaagtaaccggcccactg 19672989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 31050665 - 31050871
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||  |  |||||| || ||| | ||||||||||||||||||||||||||  |||||| ||| ||||||| ||  |||||||||||||||    
T  31050665 ccaaaaaccaactcaaaccaaagacctaacttccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagtagggcacccctcgccc 31050764  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || ||||| || || || | || |||||||||||| | ||||| |||||| | | |||||||| ||||||||| |||  ||||||||||| | ||||||     
T  31050765 ccggtacatcaaag-aacaccatatcaagtcaaac-aggattgcagctagtcaccgactcccggtctcgaagcaaaagtaaccggcccaccggaaaccaa 31050862  T
Q  201 cacacaata 209  Q
    |||| ||||    
T  31050863 cacataata 31050871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 207
Target Start/End: Original strand, 22811172 - 22811367
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    |||||||| ||||||||||||||| |||||||||| |||| ||||||||||  |||||| ||  ||||||| ||  |||||| |||| |||| | |||||    
T  22811172 aacttgagccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagactttaagaccaaatcagaagggcactcctcaccccga-tacac 22811270  T
Q  110 cagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
    |||||||| | |||||||   |||||||| |||| | |||||| |  | | ||||||||||||| |||  ||||| ||||| ||||||||||||||||    
T  22811271 cagagaaacaccaaatcacaccaaacaaa-attgcaactagacaccaagttccgatctcgaagcaaaagtaaccgacccaccgaaaaccagcacacaa 22811367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 19815236 - 19815415
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    |||||||| |||||||||||||||||||||||||| |||||| ||||| ||  |||||| ||| ||||||  ||  ||||||||||| ||||| ||  ||    
T  19815236 aacttgagccaaagaactgactcctgatctcgaataaaaagtaatcggtccaccagactttaggaccaaaacagaagggcacccctcacccccggtcaac 19815335  T
Q  110 cagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccac 190  Q
    |||| ||| |  | |||||| ||||| ||||||| |||||||| | ||||| |||||||||||| |||  ||| |||||||    
T  19815336 cagaaaaatacaatatcaagccaaac-aagattgcagctagacaccgactctcgatctcgaagcaaaagtaactggcccac 19815415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 39421042 - 39421187
Alignment:
Q  27 tgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaaatcaaatc 126  Q
    ||||||| ||||||||||||||||||||||||||  ||| |||||  |||| || ||  ||||||||||| ||| |||||||  ||||||| | ||||||    
T  39421042 tgactcccgatctcgaatcaaaagtgatcggcccaccaggctataagaccatatcagaagggcacccctcaccctcagtacattagagaaacaccaaatc 39421141  T
Q  127 aagtcaaacaaagattgtagctagacccggactcccgatctcgaagc 173  Q
    | | ||||| ||||||| |||||||| | || |||||||||||||||    
T  39421142 acgccaaac-aagattgcagctagacaccgattcccgatctcgaagc 39421187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 2825861 - 2825691
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||  ||||| ||||||  ||| ||| ||||||||||||||| ||||||||||  | |||| ||| ||||||| ||| | |||||||||||||    
T  2825861 ccaaaaaccacattgagccaaagaggtgattcccgatctcgaatcaaaaatgatcggcccaccggactttagaaccaaatcagcagagcacccctcgccc 2825762  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagc 173  Q
     | ||||||||||| || | || |||||||||||| | ||||| |||||||| |  |||| | ||||||||||    
T  2825761 tcggtacaccagag-aacaccatatcaagtcaaac-atgattgcagctagacaccaactctcaatctcgaagc 2825691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38929905 - 38929846
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | |||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  38929905 ccaaaatcaaacttgagccaaagaactgactcttgatctcgaatcaaaagtgatcggccc 38929846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 36962626 - 36962677
Alignment:
Q  8 ccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  36962626 ccaacttgagtcaaaga-ctgactcctgatctcgaatcaaaagtaatcggccc 36962677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 38637238 - 38637305
Alignment:
Q  4 aaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactata 71  Q
    |||||| |||| || ||||||| ||||||| ||||||||||||||||||||||||||  |||||||||    
T  38637238 aaaacctacttaagccaaagaattgactcccgatctcgaatcaaaagtgatcggcccgccagactata 38637305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 39041285 - 39041336
Alignment:
Q  9 caacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    ||||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  39041285 caacttgagtctagaaactgactcctgatctcgaatcaaaagtgatcggccc 39041336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 46698797 - 46698881
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccc 94  Q
    |||||||  ||||||||||||||| ||||||||||||||||  ||||||||  ||||||| || ||||||| ||  |||||||||    
T  46698797 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagactacaggaccaaatcagaagggcacccc 46698881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 2792286 - 2792335
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcc 59  Q
    ||||||||||||  |||||||| | |||||||||||||||||||||||||    
T  2792286 aacttgagtcaagaaactgacttccgatctcgaatcaaaagtgatcggcc 2792335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 21387216 - 21387263
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcgg 57  Q
    ||||||| || ||||||||||| | |||||||||||||||||||||||    
T  21387216 aacttgaatcgaagaactgacttccgatctcgaatcaaaagtgatcgg 21387263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 60
Target Start/End: Original strand, 17416541 - 17416571
Alignment:
Q  30 ctcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||||||||||||||||||||||||||||    
T  17416541 ctcctgatctcgaatcaaaagtgatcggccc 17416571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35341341 - 35341391
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagt 51  Q
    ||||||||||||||||| |||||| |||||| | ||||||| |||||||||    
T  35341341 ccaaaaaccaacttgagccaaagagctgacttccgatctcggatcaaaagt 35341391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 40813797 - 40813843
Alignment:
Q  14 tgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    ||||||||| || || |||| ||||||||||||||||||||||||||    
T  40813797 tgagtcaaaaaattggctcccgatctcgaatcaaaagtgatcggccc 40813843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 41117982 - 41118040
Alignment:
Q  13 ttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactata 71  Q
    ||||| ||||||||| ||| | |||||||||||||||||||||  |||| |||||||||    
T  41117982 ttgagccaaagaacttacttccgatctcgaatcaaaagtgatcttccctccagactata 41118040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 16501791 - 16501750
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| |||||||| |||||||||||||||| |||||||||    
T  16501791 caaagagctgactcccgatctcgaatcaaaagcgatcggccc 16501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 37707388 - 37707417
Alignment:
Q  31 tcctgatctcgaatcaaaagtgatcggccc 60  Q
    ||||||||||||||||||||||||||||||    
T  37707388 tcctgatctcgaatcaaaagtgatcggccc 37707417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28966945 - 28966897
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaa 49  Q
    |||||| | |||||||| |||||||||||||||  ||||||||||||||    
T  28966945 ccaaaaccaaacttgagccaaagaactgactcccaatctcgaatcaaaa 28966897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 35800567 - 35800511
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcgg 57  Q
    |||||| | |||| || |||||||||||||| | |||||||||||||||| ||||||    
T  35800567 ccaaaaccaaactggaatcaaagaactgacttccgatctcgaatcaaaagcgatcgg 35800511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 49747586 - 49747526
Alignment:
Q  20 aaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaat 80  Q
    |||||||||||||  |||||| ||||||||||||||||| |  |||||| ||| |||||||    
T  49747586 aaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaat 49747526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 39338868 - 39339148
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||  |||||||||||||||||||||| |||||||||||||||    
T  39338868 ccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactatagtaccaaattagcagggcacccctcgccc 39338967  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||| ||||||| |||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  39338968 ccggtacaccaaagaaaaaccaaatcaagtcaaacaaatattgcagctagaccccgactcccgatctcgaagccaaatgaactggcccaccgaaaaccag 39339067  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgt 281  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  39339068 cacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaataaacaaatcaaaaggaaaaggctcaacacaacgt 39339148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 10524179 - 10523873
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaac----tgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctc 96  Q
    |||||||||||||||||||||||||     ||||||| ||||||||||||||||||||||||||  |||||||||| |||||||| || ||||||| |||    
T  10524179 ccaaaaaccaacttgagtcaaagaatatattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggcagggcacctctc 10524080  T
Q  97 gcccccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaa 196  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||| |||| |||||    
T  10524079 gcccccagtagaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagagcccgactcccgatctcgaagccaaatgaaccggtccaccgaaaa 10523980  T
Q  197 ccagcacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttca 296  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||||  || ||||||| ||    
T  10523979 ccagcacacaatatgtaagatgaaagacatggcatgcgaaatttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacgcaccctaca 10523880  T
Q  297 aactccg 303  Q
    |||||||    
T  10523879 aactccg 10523873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 7874369 - 7874145
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||  |||||| ||| ||||||| ||| |||||||| ||||||    
T  7874369 ccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcgacccaccagactttagaaccaaatcagcagggcacccatcgccc 7874270  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
     | |||||| |||| || | || |||||||||| | | ||||| |||||||| |  ||||||||||||||||| |||  ||||||||||| | | |||||    
T  7874269 tcggtacactagag-aacaccatatcaagtcaagc-aggattgcagctagacaccaactcccgatctcgaagcaaaaaaaaccggcccaccggacaccag 7874172  T
Q  201 cacacaatatgtaagatgaaagacatg 227  Q
    |||||||||| ||||| || |||||||    
T  7874171 cacacaatatttaagacgatagacatg 7874145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 17105456 - 17105197
Alignment:
Q  35 gatctcgaatcaaaa-gtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaaatcaaatcaagtcaa 133  Q
    ||||||||||||||| ||||||||||| |||||||  |||||||||| ||  ||||||||||| ||||  |||||||| ||||| | | ||| |||||||    
T  17105456 gatctcgaatcaaaaagtgatcggcccatcagacttcagtaccaaatcagtagggcacccctcacccctggtacaccaaagaaacacctaattaagtcaa 17105357  T
Q  134 acaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaatatgtaagatgaaagacatggcatgc 233  Q
    |||| | ||| |||||||| | ||||||  ||||| |||| |||  ||||| ||||| | ||||||||||||||||||||||||||||||||||  |||     
T  17105356 acaagg-ttgcagctagacgccgactccttatctccaagcaaaagtaaccgacccaccggaaaccagcacacaatatgtaagatgaaagacatgatatga 17105258  T
Q  234 ga-agtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcaccct 293  Q
    ||  ||  ||||| |||||||||||||||||||||||| | |||||||   ||||||||||    
T  17105257 gatggtgcaaacaccaaacaaatcaaaaggaaaaggctcatcacaacgggacaagcaccct 17105197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 387250 - 387151
Alignment:
Q  2 caaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccc 101  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||||||||||| ||||  |||||| ||||||||||||||| ||||||||||||||||    
T  387250 caaaaaccaacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagcccaccagactttagtaccaaattagcagggcacccctcgcccc 387151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 14106546 - 14106734
Alignment:
Q  20 aaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaaa 119  Q
    ||||| |||||||| ||||| ||||||||||||||||||||  |||||| ||| ||||||| ||| |||||||||||||||   |||||  |||| || |    
T  14106546 aaagagctgactcccgatcttgaatcaaaagtgatcggcccaccagactttaggaccaaatcagcagggcacccctcgccctgggtacatgagaggaaca 14106645  T
Q  120 tcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaata 209  Q
     ||||||||||||||| | ||||| |||||| | | |||||||  ||||||||| |||  ||||||||||| | |||||| |||||||||    
T  14106646 ccaaatcaagtcaaac-aggattgcagctagtcaccgactccctgtctcgaagcaaaagtaaccggcccaccggaaaccaacacacaata 14106734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 1269561 - 1269373
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| | |||||||| ||||||||||||| | ||||||||||||||||||||||||||  |||||| ||| || |||| ||  ||||||||||| ||     
T  1269561 ccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctcacct 1269462  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggccca 189  Q
       ||| |||||||||| ||||||| ||| ||||  |||| || ||||||||   |||||||||||||||||| |||| ||||| ||||    
T  1269461 ttggtataccagagaaacatcaaattaagccaaaacaagaatgcagctagacatcgactcccgatctcgaagcaaaattaaccgaccca 1269373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14405276 - 14405162
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||  |||||| ||| ||||||| | |   |||||||||||||    
T  14405276 ccaaaaaccaacttgagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcatc-aagcacccctcgccc 14405178  T
Q  101 ccagtacaccagagaa 116  Q
    || |||||||||||||    
T  14405177 ccggtacaccagagaa 14405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13337352 - 13337285
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagact 68  Q
    |||||| | |||||||||||||||||||||| | ||| |||||||||||||||||||||| |||||||    
T  13337352 ccaaaacctaacttgagtcaaagaactgacttccgatttcgaatcaaaagtgatcggcccatcagact 13337285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 37770663 - 37770849
Alignment:
Q  20 aaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaaa 119  Q
    |||||| ||||||||||||  ||||||||||||||||||||  || ||  ||| ||||||| || |||||||||||| ||| | |||||||||||||| |    
T  37770663 aaagaattgactcctgatccagaatcaaaagtgatcggcccaccaaaccttaggaccaaatcagatgggcacccctcaccctcggtacaccagagaaaca 37770762  T
Q  120 tcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
      |||||  | ||||   | ||||  ||||||| |  ||||||||||||||||| |||  ||||||||||| || |||||||| ||||    
T  37770763 ctaaatcgcgccaaatcga-attgctgctagacaccaactcccgatctcgaagcaaaagtaaccggcccaccgataaccagcaaacaa 37770849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4472001 - 4471942
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||||| ||||||| |||||||||||||||| |||||||||||||| | |||||||||    
T  4472001 ccaaaaacaaacttgaatcaaagaactgactcccgatctcgaatcaaaggcgatcggccc 4471942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22885136 - 22885195
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | |||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  22885136 ccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggccc 22885195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16960060 - 16960001
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | |||||||| ||||||||||||||  |||||||||||||||| |||||||||    
T  16960060 ccaaaaccaaacttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggccc 16960001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34230279 - 34230220
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | |||||||  |||||||||||||||||||||||||| |||| ||||||||||    
T  34230279 ccaaaatcaaacttgatccaaagaactgactcctgatctcgaataaaaaatgatcggccc 34230220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 207
Target Start/End: Original strand, 41086823 - 41086994
Alignment:
Q  33 ctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaaatcaaatcaagtca 132  Q
    |||||||||||||||||||||| | |||  |||||||||  ||||||| ||  ||||| ||||| ||||  ||||||||||| || | ||||||| | ||    
T  41086823 ctgatctcgaatcaaaagtgattgacccaccagactatatgaccaaatcagaagggca-ccctcacccctggtacaccagag-aacaccaaatcacgcca 41086920  T
Q  133 aacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
    |||||| ||||||||| ||| | || |||||||||| |||| |||  || ||| |||| | ||||| ||||||||    
T  41086921 aacaaa-attgtagctggacaccgattcccgatctcaaagcaaaagtaatcggtccaccggaaacctgcacacaa 41086994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7696041 - 7695985
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcgg 57  Q
    |||||| | |||||||| ||||||||||||||| | | |||||||||||||||||||    
T  7696041 ccaaaacctaacttgagccaaagaactgactcccggtatcgaatcaaaagtgatcgg 7695985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2062967 - 2062908
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | |||||||| |||||| |||||||| ||||||||||||||||  ||||||||    
T  2062967 ccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcaatcggccc 2062908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10173581 - 10173640
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | |||||||| |||| |||| ||| | ||||||||||||||||||||||||||    
T  10173581 ccaaaaccaaacttgagccaaataacttacttccgatctcgaatcaaaagtgatcggccc 10173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15126413 - 15126472
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | ||| |||| |||||||| |||||| ||||||||||||||| ||||||||||    
T  15126413 ccaaaaccaaacatgagccaaagaaccgactcccgatctcgaatcaaaaatgatcggccc 15126472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 7695906 - 7695869
Alignment:
Q  241 aaacaacaaacaaatcaaaaggaaaaggctgaacacaa 278  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  7695906 aaacaacaaacatatcaaaaggaaaaggctcaacacaa 7695869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16952386 - 16952443
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggc 58  Q
    |||||| | |||||||| |||||||||| |||| |||||||||||||||  |||||||    
T  16952386 ccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 16952443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17023051 - 17023108
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggc 58  Q
    |||||| | |||||||| |||||||||| |||| |||||||||||||||  |||||||    
T  17023051 ccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 17023108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17060357 - 17060414
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggc 58  Q
    |||||| | |||||||| |||||||||| |||| |||||||||||||||  |||||||    
T  17060357 ccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 17060414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17079247 - 17079190
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggc 58  Q
    |||||| | |||||||| |||||||||| |||| |||||||||||||||  |||||||    
T  17079247 ccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggc 17079190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 27740029 - 27739936
Alignment:
Q  25 actgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaa 118  Q
    ||||||||  ||||| |||||||||| |||||||||  ||||||  || |||||   || |||||||||||  |||||||| ||||||||||||    
T  27740029 actgactctcgatcttgaatcaaaagcgatcggcccaccagacttcaggaccaatccagatgggcacccctaacccccagtccaccagagaaaa 27739936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 33788653 - 33788694
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||||||||||||  ||||||||||||||| |||||||||    
T  33788653 caaagaactgactcccaatctcgaatcaaaagcgatcggccc 33788694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 42048229 - 42048278
Alignment:
Q  11 acttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||||||||| ||||| |||| | ||||||||||||||||||| ||||    
T  42048229 acttgagtcaaaaaactggctcccggtctcgaatcaaaagtgatcagccc 42048278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 5254331 - 5254275
Alignment:
Q  4 aaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||||||||||  |||||| | |||||| |||||| ||| |||||||||||||||    
T  5254331 aaaaccaacttgaaccaaagagcagactcccgatctcaaattaaaagtgatcggccc 5254275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 23650444 - 23650384
Alignment:
Q  20 aaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaat 80  Q
    |||||| ||||||| |||||||||||||||| |||| ||||  |||||| ||| |||||||    
T  23650444 aaagaaatgactcccgatctcgaatcaaaagcgatcagcccaccagactctagaaccaaat 23650384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 37831072 - 37831024
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggc 58  Q
    ||||||||||||  |||||||| | ||| ||||||||||||||||||||    
T  37831072 aacttgagtcaagaaactgacttcagatttcgaatcaaaagtgatcggc 37831024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 698439 - 698137
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||| |||||| ||  |||||||||| ||||||||||| |||||||||||||||    
T  698439 ccaaaaaccaacttgagtcaaagagttgactcccgatctcgaatcaaaagagatcggtccaccagactatagcaccaaattagcagggcacccctcgccc 698340  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||||| ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  698339 ccggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccctgactcccgatctcgaagccaaatgaaccggcccactaaaaaccag 698240  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||| |||||  ||  |||||| ||||||    
T  698239 cacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacatatcaaaaagaaaaggctcaacataacgtgacacacaccctccaaact 698140  T
Q  301 ccg 303  Q
    |||    
T  698139 ccg 698137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 18593321 - 18593019
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||   | ||||||| ||||||||||| ||||| |||||||||    
T  18593321 ccaaaaaccaacttgagtcaaagaactaactcccgatctcgaatcaaaagtgatctgcccactaaactatagcaccaaattagcagggcatccctcgccc 18593222  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||| ||||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||    
T  18593221 ccggtacacgagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaatcag 18593122  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    |||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||| |||||  || ||||||| ||||||    
T  18593121 cacacaatatgtaaaacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacataacgtgacatgcaccctccaaact 18593022  T
Q  301 ccg 303  Q
    |||    
T  18593021 ccg 18593019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 34378176 - 34377907
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||||||| |||||| ||| ||||    
T  34378176 ccaaaaaccaacttgtgtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcactccttgccc 34378077  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||||  ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||| || |||||||||    
T  34378076 ccggtacaccagagaaaacccaaatcaagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcctaccgaaaaccag 34377977  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggct 270  Q
    ||||| |||| ||||| |||||| ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  34377976 cacacgatatataagacgaaagatatggcatacgaagtttaaacaacaaacgaatcaaaaggaaaaggct 34377907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 29087555 - 29087364
Alignment:
Q  5 aaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccag 104  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||| |||| | ||  |||||| ||| |||||| |||| | ||||||||||||||| |    
T  29087555 aaaccaatttgattcaaagaactgactcctgatctcgaatcaaaagggatcagtccaccagactttagaaccaaaatagcagagcacccctcgcccccgg 29087456  T
Q  105 tacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaa 196  Q
    |||| |||||||  | |||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||| |||||    
T  29087455 tacaacagagaattaccaaaacaagtcaaacaaagattgcagctagactccgactcccgatctcgaagccaaatgaaccggcccaccgaaaa 29087364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 7392052 - 7392205
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaa 118  Q
    ||||||||||||||| ||||||||||||||||||||||| ||  |||||| ||| ||||||| ||  ||||||||||| ||| | ||||| ||||||||     
T  7392052 caaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaagggcacccctcaccctcggtacatcagagaaac 7392151  T
Q  119 atcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagc 173  Q
    | ||||||||| ||||| ||||||| |||||||| |  |||||||||||||||||    
T  7392152 accaaatcaagccaaac-aagattgcagctagacaccaactcccgatctcgaagc 7392205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 13954237 - 13954441
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| | |||||||| ||||| | ||||||| ||||||||||||||||||||||||||  |||||| ||| ||||||| ||   |||||||||| ||     
T  13954237 ccaaaaccaaacttgagccaaagtaatgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcag-aaggcacccctcacct 13954335  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
     | |||||||||||||| |  |||||||||||||  ||||||| |||||||| | |||||  ||||||||||| |||  ||||||||||| |||||||||    
T  13954336 tcggtacaccagagaaacacaaaatcaagtcaaa-taagattgcagctagacaccgactcttgatctcgaagcaaaagtaaccggcccaccgaaaaccag 13954434  T
Q  201 cacacaa 207  Q
    || ||||    
T  13954435 catacaa 13954441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 8297546 - 8297347
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| | |||||||| ||||||||||||||| ||||||||||||||| | ||  ||||  ||  || ||| ||||||| ||  ||||||||||| |||    
T  8297546 ccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaaattattagcccaccatgctttagaaccaaatcagaagggcacccctcaccc 8297447  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
     | |||||| ||||||| | |||||||||  ||||||| |||| |||||||| |  |||| |||||||||||| |||  || ||||||||||||||||||    
T  8297446 tcggtacactagagaaacaccaaatcaagcaaaacaaa-attgcagctagacaccaactctcgatctcgaagcaaaagtaatcggcccactgaaaaccag 8297348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 207
Target Start/End: Original strand, 7195251 - 7195447
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||| |  |||||| ||   |||||| ||  |||||||||||  |||  ||||||    
T  7195251 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggctcaccagactttatggccaaatcagaagggcacccctc-accctggtacac 7195349  T
Q  110 cagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccact-gaaaaccagcacacaa 207  Q
    |||||||| |  |||||| | ||||| || |||| |||||| | | |||||||||||||||||| |||  ||| |||||||| |||||||| |||||||    
T  7195350 cagagaaacactaaatcacgccaaac-aatattgcagctagccaccgactcccgatctcgaagcaaaagtaactggcccactggaaaaccaacacacaa 7195447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 33258903 - 33259050
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaa 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||  |||||| ||| ||||||  ||  || |||||||| ||  | ||||||||||||||     
T  33258903 caaagaactaactcctgatctcgaatcaaaagtgatcggcccaccagactttagcaccaaaacagaaggacacccctcaccttcggtacaccagagaaac 33259002  T
Q  119 atcaaatcaagtcaaacaaagattgtagctagacccggactcccgatct 167  Q
    | ||||||  | ||||| |||||||||||||||  | ||||||||||||    
T  33259003 accaaatcgcgccaaac-aagattgtagctagataccgactcccgatct 33259050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 14302451 - 14302604
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaa 118  Q
    |||||||||||||||  |||||||| ||||||||||| | ||  |||||| ||| ||||||  ||  ||||| ||||| ||| |  |||||||||||||     
T  14302451 caaagaactgactcccaatctcgaaccaaaagtgatcagtccaccagactttaggaccaaaacagaagggcatccctcaccctcgatacaccagagaaac 14302550  T
Q  119 atcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagc 173  Q
    | || |||| | |||||  || ||| |||||||| ||||||||||||||||||||    
T  14302551 accagatcacgccaaac-tagcttgcagctagacacggactcccgatctcgaagc 14302604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 25992066 - 25991936
Alignment:
Q  20 aaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaaa 119  Q
    |||||||||||||  |||||||||||||||| ||| |||||  |||||| ||| |||||| |||  |||||| ||||  |  | |||||||||| ||| |    
T  25992066 aaagaactgactctcgatctcgaatcaaaagcgattggcccaccagactttagcaccaaaatagaagggcactcctcatcttcggtacaccagaaaaaca 25991967  T
Q  120 tcaaatcaagtcaaacaaagattgtagctaga 151  Q
    |||||||  ||||||| ||||||| |||||||    
T  25991966 tcaaatcgtgtcaaac-aagattgcagctaga 25991936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 31721734 - 31721639
Alignment:
Q  22 agaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaa 117  Q
    |||||||||||| |||||||||||||||| ||||||||| | |||||  || |||| || ||  ||||||||||  ||||| || |||||||||||    
T  31721734 agaactgactcccgatctcgaatcaaaagcgatcggcccattagacttcagaaccacatcagaagggcaccccttacccccggtccaccagagaaa 31721639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 21402853 - 21402899
Alignment:
Q  14 tgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||    
T  21402853 tgagtcaaagaactgactcccgatctcgaactaaaagtgatcggccc 21402899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 39184208 - 39184249
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    ||||||||||||| | ||||||||||||||||||||||||||    
T  39184208 caaagaactgacttccgatctcgaatcaaaagtgatcggccc 39184249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7162320 - 7162352
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcc 33  Q
    |||||||||||||||||||||||||||||||||    
T  7162320 ccaaaaaccaacttgagtcaaagaactgactcc 7162352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22675327 - 22675375
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaa 49  Q
    |||||| | |||||||| ||||||||||||||| |||||||||||||||    
T  22675327 ccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaa 22675375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27713147 - 27713088
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | |||||||| ||||||||||| ||| |||||||||||||||  |||||||||    
T  27713147 ccaaaaccaaacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggccc 27713088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26045967 - 26046023
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcgg 57  Q
    |||||| | |||||||| ||||  ||| ||||| |||||||||||||||||||||||    
T  26045967 ccaaaaccaaacttgagccaaaacactaactcccgatctcgaatcaaaagtgatcgg 26046023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 196; Significance: 1e-106; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 20611861 - 20611562
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||  || |||||||||| |||||||| |||||||||||||||    
T  20611861 ccaaaaaccaacttaagtcaaagaactgactcccgatctcgaatcaaaaatgatcggcccaacaaactatagtacgaaattagcagggcacccctcgccc 20611762  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||||||| ||||| |||||||||    
T  20611761 ccggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcctgatctcgaaaccaaatgaaccgacccaccgaaaaccag 20611662  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    |||||||||||||||| |||| |||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||  || ||||||| ||||||    
T  20611661 cacacaatatgtaagacgaaaaacatagcatgcgaagtttgaacaataaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccctccaaact 20611562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 2392509 - 2392771
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||| || ||||||||||||| |  |||||||||||||||||||||| ||  ||| |||||||||||||||||| |||||||||||||||    
T  2392509 ccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccctcgccc 2392608  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || ||||||||||| |||| |||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||  |||||||||    
T  2392609 ccggtacaccagagtaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaaccag 2392708  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaagga 263  Q
    |||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  2392709 cacacaatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatcaaaagga 2392771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 2394256 - 2394518
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||| || ||||||||||||| |  |||||||||||||||||||||| ||  ||| |||||||||||||||||| |||||||||||||||    
T  2394256 ccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccctcgccc 2394355  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || ||||||||||| |||| |||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||  |||||||||    
T  2394356 ccggtacaccagagtaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaaccag 2394455  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaagga 263  Q
    |||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  2394456 cacacaatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatcaaaagga 2394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 34475757 - 34476058
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||| |||||| | || ||||  ||||||| ||||||||||||||||||||||||||  |||||||||| | ||||||||| |||||||||||||||    
T  34475757 ccaaaaatcaacttaattccaagatttgactcccgatctcgaatcaaaagtgatcggcccaccagactatagaaacaaattagcagggcacccctcgccc 34475856  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || ||||||||||||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||| |||||||  |||||||||    
T  34475857 ccggtacaccagagaaaaatcaaaccaagtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaaccag 34475956  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
    ||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||| ||||||||||||| || |||||||  ||  |||||| ||||||    
T  34475957 cacacgatatgtaagacaaaagacaaggcatgcgaagtttaaacaacaaacaaatccaaaggaaaaggctcaa-acaacgtgacacccaccctccaaact 34476055  T
Q  301 ccg 303  Q
    |||    
T  34476056 ccg 34476058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 19176580 - 19176316
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||| ||| ||||||||||| |||||||| || | |    
T  19176580 ccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaattagcagggcaccc-tcactc 19176482  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || ||||| |||||||||| ||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||| ||||| |||||| |||||||||    
T  19176481 ccggtacatcagagaaaaaccaaattaagtcaaacaaagattgcagctagaccccgactcctgatctcgaagccaaaggaaccagcccaccgaaaaccag 19176382  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaa 266  Q
    ||||||||| |||||| ||||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  19176381 cacacaataagtaagaggaaagacatggcatgtgaagtttaaccaacaaacaaatcacaaggaaaa 19176316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 66 - 303
Target Start/End: Complemental strand, 47235729 - 47235492
Alignment:
Q  66 actatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgat 165  Q
    |||||||| |||||||||| ||||||||||||||||| ||||||  |||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  47235729 actatagtcccaaattagcagggcacccctcgcccccggtacactggagaaaaaccaaaccaagtcaaacaaagattgcagctagaccctgactcccgat 47235630  T
Q  166 ctcgaagccaaatgaaccggcccactgaaaaccagcacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaa 265  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  47235629 ctcgaagccaaatgaaccggcccatcgaaaaccagcacacattatgtaagacgaaagacatggcgtgcgaagtttaaacaacaaacaaatcaaaaggaaa 47235530  T
Q  266 aggctgaacacaacgttgcaagcacccttcaaactccg 303  Q
    ||||| ||||||||||  || ||||||| |||||||||    
T  47235529 aggctcaacacaacgtgacacgcaccctccaaactccg 47235492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 45163933 - 45163651
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttc--agactatagtaccaaattagctgggcacccctcgc 98  Q
    |||||||||||||| || |||| |||||||| ||||||||||||||||||||||||||||     ||||||||||||||||||||| |||||||||||||    
T  45163933 ccaaaaaccaacttaagacaaaaaactgacttctgatctcgaatcaaaagtgatcggcccacacaagactatagtaccaaattagcagggcacccctcgc 45163834  T
Q  99 ccccagtaca----ccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaa 194  Q
    || | |||||    | |||||||||||||| |||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||| |   ||    
T  45163833 cctcggtacatgcactagagaaaaatcaaaccaagtcaaacaaagattgcagctagaccccgacttccgatcttgaagccaaatgaaccggcctatcaaa 45163734  T
Q  195 aaccagcacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacaca 277  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||| ||||||| ||| || ||||||    
T  45163733 aaccagcacacaatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaataaaaaggacaagactcaacaca 45163651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 23328354 - 23328564
Alignment:
Q  2 caaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccc 101  Q
    |||||||||||||||| |||| | || ||||| ||||||||||||||||||||||| ||  || ||| ||| ||||||| | | ||||||||||||||||    
T  23328354 caaaaaccaacttgagccaaaaagctaactcccgatctcgaatcaaaagtgatcggtccaccaaactttagaaccaaatcaacagggcacccctcgcccc 23328453  T
Q  102 cagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagc 201  Q
    | ||||||||||| || | || ||||||||||||||| |||| |||||||| |  ||||||||||||||||| |||  ||||||||||  | | ||||||    
T  23328454 cggtacaccagag-aacaccatatcaagtcaaacaaa-attgcagctagacaccaactcccgatctcgaagcaaaa--aaccggcccatcggacaccagc 23328549  T
Q  202 acacaatatgtaaga 216  Q
    |||||||||||||||    
T  23328550 acacaatatgtaaga 23328564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 207
Target Start/End: Complemental strand, 25647753 - 25647557
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    ||||| || ||||||||  ||||| |||||||||||||||||||| ||||| ||||||| ||| ||||||| ||  |||||||| || | ||| ||||||    
T  25647753 aacttaagccaaagaaccaactcccgatctcgaatcaaaagtgataggcccgtcagactttaggaccaaatcagaagggcacccttcactcccggtacac 25647654  T
Q  110 cagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
    |||||||| | ||||||| | |||||| | |||| |||||||| | |||||||| ||||||||| |||  ||||||||||  | |||||| |||||||    
T  25647653 cagagaaacaccaaatcacgccaaacaga-attgcagctagacaccgactcccgttctcgaagcaaaagtaaccggcccatcggaaaccaacacacaa 25647557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17551035 - 17550965
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactata 71  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  17551035 ccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactata 17550965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 40023575 - 40023799
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||| || |||||||  |||||| ||||||||||||||||||||||| ||  |||||| ||  || |||| ||| ||||| |||||||||    
T  40023575 ccaaaaaccaacttaagccaaagaatcgactcccgatctcgaatcaaaagtgatcggtccaccagactttaaaacaaaatcagcagggca-ccctcgccc 40023673  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||| |||| || | || |||||||||||  | ||||| |||||||| |  ||| ||||||||||||| |||  |||||| |||| | | ||||     
T  40023674 ccggtacactagag-aacaccatatcaagtcaaaacatgattgcagctagacaccaacttccgatctcgaagcaaaaataaccggtccaccggacaccaa 40023772  T
Q  201 cacacaatatgtaagatgaaagacatg 227  Q
     ||||||||||||||| || |||||||    
T  40023773 tacacaatatgtaagacgatagacatg 40023799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 43012452 - 43012372
Alignment:
Q  2 caaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaatta 82  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||  |||||| ||| |||||||||    
T  43012452 caaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgggccaccagactttagaaccaaatta 43012372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9584056 - 9584173
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcaccc-ctcgcc 99  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||  ||  |||||| ||||| ||||||||| |||||||| ||| ||    
T  9584056 ccaaaaaccatcttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactttagtatcaaattagcagggcaccctctc-cc 9584154  T
Q  100 cccagtacaccagagaaaa 118  Q
    ||| |||||| ||||||||    
T  9584155 cccggtacacaagagaaaa 9584173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 14194009 - 14193846
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    |||||||| |||||||| ||||||  |||||||||||||||||||||| ||  |||||| ||| ||||||| ||  ||||||||||| | ||| ||||||    
T  14194009 aacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggaccaaatcagaagggcacccctcactcccggtacac 14193910  T
Q  110 cagagaa-aaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagc 173  Q
    || |||| | | ||||||| | ||| || | ||||||||||||| | |||||||||| |||||||    
T  14193909 caaagaacacaccaaatcacgccaagcaga-attgtagctagacaccgactcccgatatcgaagc 14193846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 37123442 - 37123289
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaa 118  Q
    |||||||||||||||  |||||||||||||||||||||||||  || | | ||| ||||||  |   ||||||||||| ||  | ||||| ||||||||     
T  37123442 caaagaactgactcccaatctcgaatcaaaagtgatcggcccaccaaaatttaggaccaaaacataagggcacccctctccttcggtacatcagagaaac 37123343  T
Q  119 atcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagc 173  Q
    | ||||||| | |||||||| |||| |||||||| | ||||||||||||||||||    
T  37123342 accaaatcacgccaaacaaa-attgcagctagacaccgactcccgatctcgaagc 37123289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45398874 - 45398776
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcc 99  Q
    |||||||||||||| | ||||||| |||||||  ||||||||||||||||||||||| ||  |||||| ||   |||||| ||| ||||||||||||||    
T  45398874 ccaaaaaccaacttaaatcaaagagctgactctcgatctcgaatcaaaagtgatcggtccaccagactttaaatccaaatcagcagggcacccctcgcc 45398776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 14755286 - 14755471
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaa 118  Q
    ||||||||||||||| ||||| ||||||||||||||||||||  |||||| ||| || |||  |   ||||||||||| ||  | ||||||||||||||     
T  14755286 caaagaactgactcccgatcttgaatcaaaagtgatcggcccaccagactttagcacaaaa--aaaagggcacccctcaccttcggtacaccagagaaac 14755383  T
Q  119 atcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
    | |||| |  |  |||| ||||||| |||||||  | |||||||||||||||||| |||  ||||||||||  | ||| ||||||||||    
T  14755384 accaaaacgcgcgaaac-aagattgcagctagataccgactcccgatctcgaagcaaaagtaaccggcccatcggaaatcagcacacaa 14755471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1652889 - 1652948
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | |||||||  ||||||||| ||||||||||||||||||||||||||||||||    
T  1652889 ccaaaaccaaacttgaaccaaagaactaactcctgatctcgaatcaaaagtgatcggccc 1652948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47945784 - 47945725
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||| | |||||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  47945784 ccaaaatcaaacttgagccaaataactgactcccgatctcgaatcaaaagtgatcggccc 47945725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 30127332 - 30127283
Alignment:
Q  10 aacttgagtcaa-agaactgactcctgatctcgaatcaaaagtgatcggc 58  Q
    |||||||||||| |||||||||||| |||||||||||||||| |||||||    
T  30127332 aacttgagtcaagagaactgactcccgatctcgaatcaaaagcgatcggc 30127283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 33143970 - 33144007
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcg 56  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  33143970 caaagaactgactcccgatctcgaatcaaaagtgatcg 33144007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 39021297 - 39021338
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  39021297 caaagaactgactcccgacctcgaatcaaaagtgatcggccc 39021338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 31482928 - 31482880
Alignment:
Q  35 gatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattag 83  Q
    ||||||||||||||||||||| ||||  |||||||||| ||||||||||    
T  31482928 gatctcgaatcaaaagtgatccgcccgccagactatagaaccaaattag 31482880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 5556639 - 5556580
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagacta 69  Q
    |||||||  ||||||||||||||| |||||||||||||||| ||||| |||  |||||||    
T  5556639 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgccccaccagacta 5556580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 14879504 - 14879421
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcaccc 93  Q
    |||||||  ||| |||| |||||| ||||||||||||||||||||||||||  |||||| ||| ||| ||| ||  ||||||||    
T  14879504 aacttgatccaacgaacagactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacccaatcagaagggcaccc 14879421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 47235776 - 47235729
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaa 48  Q
    |||||||||||||| ||||||||||| |||||  ||||||||||||||    
T  47235776 ccaaaaaccaacttaagtcaaagaaccgactctcgatctcgaatcaaa 47235729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 823447 - 823497
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    ||||||| | ||| |||||||||  ||||||||||||||||||||||||||    
T  823447 aacttgaatgaaacaactgactctcgatctcgaatcaaaagtgatcggccc 823497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 196
Target Start/End: Original strand, 4464024 - 4464132
Alignment:
Q  86 gggcacccctcgcccccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccgg 185  Q
    ||||||||||| ||| | |||||| ||||||| | ||||||| | || |||| ||||| | |||||| | |||||||||||||||||| |||  ||||||    
T  4464024 gggcacccctcaccctcggtacac-agagaaacaccaaatcacgccacacaa-gattgcaactagacaccgactcccgatctcgaagcaaaagtaaccgg 4464121  T
Q  186 cccactgaaaa 196  Q
    ||||| |||||    
T  4464122 cccaccgaaaa 4464132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 31424304 - 31424256
Alignment:
Q  11 acttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcc 59  Q
    |||||| |||||| ||||||||| |||||||||||||||| || |||||    
T  31424304 acttgaatcaaagcactgactcccgatctcgaatcaaaagcgaccggcc 31424256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 35775 - 36075
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||   ||||||||  |||||||||||| ||||||||||||||    
T  35775 ccaaaaaccaacttaagtcaaagaa-tgactcccgatctcgaatcaaaagtgatcggcccactagactatataaccaaattagctaggcacccctcgccc 35873  T
Q  101 ccagtacaccagagaaaaatcaaa-tcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaacca 199  Q
    || |||||||||||||||| |||| | ||||||||||||||||| | |||||||  ||||||||||||||||||||||||||||||||||| |||| |||    
T  35874 ccggtacaccagagaaaaaccaaaattaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaatgaaccggcccaccgaaagcca 35973  T
Q  200 gcacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaac 299  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||  ||||||||||||    
T  35974 gcacacaatatgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacactcacccttcaaac 36073  T
Q  300 tc 301  Q
    ||    
T  36074 tc 36075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 172; Significance: 2e-92; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 3117571 - 3117304
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||  || ||||||  | ||||||||| |||||||||||||||    
T  3117571 ccaaaaaccaacttgagtcaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccatactatatcaacaaattagcagggcacccctcgccc 3117472  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaa-caaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaacca 199  Q
    || | |||||||||||||| |||||||||||||| ||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  3117471 ccggaacaccagagaaaaaccaaatcaagtcaaaacaaagattgcaactagaccccgactcccaatctcgaagccaaatgaaccggcccactgaaaacca 3117372  T
Q  200 gcacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaag 267  Q
     ||||||||||||||||||||||||||||||||| ||| || |||||||||||||| ||||| |||||    
T  3117371 acacacaatatgtaagatgaaagacatggcatgcaaagattgaacaacaaacaaataaaaagaaaaag 3117304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 16510304 - 16510597
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||   ||||| ||| ||||||||||| |||||||||| ||||    
T  16510304 ccaaaaaccaacttgagtaaaagaactgactctcaatctcgaatcaaaagtgatcggcccactagactttagaaccaaattagcagggcaccccttgccc 16510403  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
     | |||||||||||||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||| |||  ||||||||||  ||||||       
T  16510404 tcggtacaccagagaaaaaccatatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagcaaaagtaaccggcccaacgaaaac--- 16510500  T
Q  201 cacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctgaacacaacgttgcaagcacccttcaaact 300  Q
        || |||||||||  ||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||   || ||||||| ||||||    
T  16510501 ----cattatgtaagacaaaagacatggcatgcgaag-taaaacaacaaacaaatcaaaaggaaaaggctcaacacaacggaacacgcaccctccaaact 16510595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 20701806 - 20702011
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| | ||||| || ||||||||| ||||| |||||||||||||||||||||||| |  ||| ||| |  ||||||| ||  ||||||||||| |||    
T  20701806 ccaaaaccaaacttaagccaaagaactaactcccgatctcgaatcaaaagtgatcggcacaccagtctaaatgaccaaatcagaagggcacccctcaccc 20701905  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    || |||||||||||||||| ||||||| | ||||||||  ||| |||||||| | || |||||||||| |||| |||  ||||||||||  | ||||||     
T  20701906 ccggtacaccagagaaaaaccaaatcacgccaaacaaa-tttgcagctagacaccgaatcccgatctcaaagcaaaagtaaccggcccatcggaaaccat 20702004  T
Q  201 cacacaa 207  Q
    |||||||    
T  20702005 cacacaa 20702011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 86 - 209
Target Start/End: Original strand, 15132611 - 15132732
Alignment:
Q  86 gggcacccctcgcccccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccgg 185  Q
    ||||||||||||||||||||||| ||||||| |  || |||||||||||||  ||||| |||||| | | |||||||||||||||||| |||  ||||||    
T  15132611 gggcacccctcgcccccagtacatcagagaacac-catatcaagtcaaacag-gattgcagctagtcaccgactcccgatctcgaagcaaaagtaaccgg 15132708  T
Q  186 cccactgaaaaccagcacacaata 209  Q
    ||||| |||||||| |||||||||    
T  15132709 cccaccgaaaaccatcacacaata 15132732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 32935342 - 32935558
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| | |||||||||| ||||||||||||| |||||||||||||||| |||||||||  ||||||  || ||||||| ||  ||| ||||||| |||    
T  32935342 ccaaaatcaaacttgagtccaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcaggaccaaatcagaagggaacccctcaccc 32935441  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccag 200  Q
    ||  | || || ||||| | || | |||| ||||  ||||||| |||||||| |  ||| | |||||| |||| |||  ||||| ||||| | || ||||    
T  32935442 ccgatccatcatagaaacaccataacaagccaaa-gaagattgcagctagacaccaacttctgatctcaaagcaaaagtaaccgacccaccggaatccag 32935540  T
Q  201 cacacaatatgtaagatg 218  Q
    ||||||||||||||||||    
T  32935541 cacacaatatgtaagatg 32935558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 207
Target Start/End: Original strand, 3880623 - 3880791
Alignment:
Q  38 ctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaaatcaaatcaagtcaaacaa 137  Q
    |||||||||||||||||||||||  || ||| ||| ||||||| ||  ||||||| ||| ||| | ||| |||||||||| | ||||||| | ||||| |    
T  3880623 ctcgaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacctctcaccctcggtaaaccagagaaacaccaaatcatgccaaac-a 3880721  T
Q  138 agattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
    |||| | |||||||| | ||||||||||||| |||| |||  ||| ||||||| | ||||||||| ||||    
T  3880722 agatagcagctagacaccgactcccgatctcaaagcaaaagtaactggcccaccggaaaccagcaaacaa 3880791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 26216042 - 26216081
Alignment:
Q  21 aagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  26216042 aagaactgactcccgatctcgaatcaaaagtgatcggccc 26216081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 34105479 - 34105432
Alignment:
Q  13 ttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||||||  |||||||||| ||||||||||||||||||||||||||    
T  34105479 ttgagtcaagaaactgactcccgatctcgaatcaaaagtgatcggccc 34105432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 12794173 - 12794133
Alignment:
Q  21 aagaactgactcctgatctcgaatcaaaag-tgatcggccc 60  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  12794173 aagaactgactcctgatctcgaatcaaaagttgatcggccc 12794133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 9224101 - 9224042
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaa 78  Q
    ||||||||||||||| |||||||||||||||| |||| ||||  |||||| ||| |||||    
T  9224101 caaagaactgactcccgatctcgaatcaaaagcgatcagcccaccagactttaggaccaa 9224042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 13423535 - 13423488
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcgg 57  Q
    |||||||| |||||||| |||||  |||||||||||||||||||||||    
T  13423535 aacttgagccaaagaaccgactctcgatctcgaatcaaaagtgatcgg 13423488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 26534742 - 26534781
Alignment:
Q  21 aagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  26534742 aagaactgactcccaatctcgaatcaaaagtgatcggccc 26534781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 33968625 - 33968670
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatc 55  Q
    |||||||  ||||||||||||||| |||||||||||||||| ||||    
T  33968625 aacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatc 33968670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 32316437 - 32316393
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgat 54  Q
    ||||||| |||||||||| ||| | ||||||||||||||||||||    
T  32316437 aacttgaatcaaagaacttactaccgatctcgaatcaaaagtgat 32316393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 207
Target Start/End: Complemental strand, 36773 - 36580
Alignment:
Q  13 ttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccag 112  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| ||||  |||||| ||| ||||||| ||  ||||||||||| | | | |||||||||    
T  36773 ttgagacaaagaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaatcagaagggcacccctcactctcggtacaccag 36674  T
Q  113 agaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
    ||||| | ||||||| | |||||||| |||| |||||||| | |||||| ||||||||| | |||| || |||||||| | |||||| |||||||    
T  36673 agaaacaccaaatcacgccaaacaaa-attgcagctagacaccgactcctgatctcgaatcaaaattaatcggcccaccggaaaccaacacacaa 36580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 19461 - 19273
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| | |||||||| ||||||||||||| | ||||||||||||||||||||||||||  |||||| ||| ||||||| ||  ||||||||||| ||     
T  19461 ccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctcacct 19362  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggccca 189  Q
       ||| |||||||||| ||||||| ||| ||||  |||| || |||||||| | |||||||||||||||||| |||| ||||| ||||    
T  19361 ttggtataccagagaaacatcaaattaagccaaaacaagaatgcagctagacaccgactcccgatctcgaagcaaaattaaccgaccca 19273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 42141 - 42329
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgccc 100  Q
    |||||| | |||||||| ||||||||||||| | ||||||||||||||||||||||||||  |||||| ||| || |||| ||  ||||||||||| ||     
T  42141 ccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctcacct 42240  T
Q  101 ccagtacaccagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggccca 189  Q
       ||| |||||||||| ||||||| ||| ||||  |||| || ||||||||   |||||||||||||||||| |||| ||||| ||||    
T  42241 ttggtataccagagaaacatcaaattaagccaaaacaagaatgcagctagacatcgactcccgatctcgaagcaaaattaaccgaccca 42329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 1038 - 1233
Alignment:
Q  19 caaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacaccagagaaaa 118  Q
    ||||||||||||||| |||||||||||||||| |||||||||  ||||||  |  ||||||| ||  ||| |||||||   |||||| |||||||||||     
T  1038 caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtccaccagagaaac 1136  T
Q  119 atc-aaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaatatgtaaga 216  Q
    | | ||||||| |||||| ||||||| |||||||| |  |||||| |||||||||| |||  || |||||||||  || ||||||||||||||||||||    
T  1137 accaaaatcaa-tcaaac-aagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaaga 1233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 207
Target Start/End: Complemental strand, 58196 - 58000
Alignment:
Q  10 aacttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccagtacac 109  Q
    |||||||  |||| || ||||| | ||||| ||||||||||||||||||||  || ||| ||| |||||||  |  |||||||   | |||   ||||||    
T  58196 aacttgatccaaacaattgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggaccaaatctgaagggcaccatacaccctaggtacac 58097  T
Q  110 cagagaaaaatcaaatcaagtcaaacaaagattgtagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaa 207  Q
    |||||||| | ||||||| | ||||||| ||||| ||||||||   |||||||||||||||||| |||  |||||||| | || ||| ||||||||||    
T  58096 cagagaaacaccaaatcacgccaaacaa-gattgcagctagacaacgactcccgatctcgaagcaaaagtaaccggcctaatggaaatcagcacacaa 58000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 3896 - 3849
Alignment:
Q  13 ttgagtcaaagaactgactcctgatctcgaatcaaaagtgatcggccc 60  Q
    |||||||||  |||||||||| ||||||||||||||| ||||||||||    
T  3896 ttgagtcaagaaactgactcccgatctcgaatcaaaattgatcggccc 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5783 - 5751
Alignment:
Q  1 ccaaaaaccaacttgagtcaaagaactgactcc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  5783 ccaaaaaccaacctgagtcaaagaactgactcc 5751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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