View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3726_low_69 (Length: 318)

Name: NF3726_low_69
Description: NF3726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3726_low_69
NF3726_low_69
[»] chr6 (53 HSPs)
chr6 (18-307)||(28103336-28103625)
chr6 (108-307)||(20733122-20733331)
chr6 (108-307)||(27852171-27852380)
chr6 (18-196)||(22375799-22375977)
chr6 (20-102)||(35011947-35012029)
chr6 (20-102)||(23539715-23539798)
chr6 (20-116)||(23077501-23077597)
chr6 (18-117)||(19024171-19024271)
chr6 (18-219)||(16246101-16246294)
chr6 (18-99)||(19669197-19669278)
chr6 (176-231)||(15173417-15173472)
chr6 (18-105)||(9097740-9097828)
chr6 (20-107)||(18697308-18697396)
chr6 (18-81)||(18231346-18231409)
chr6 (18-196)||(16966641-16966819)
chr6 (183-231)||(15900618-15900666)
chr6 (176-307)||(27329858-27330000)
chr6 (176-307)||(27390598-27390740)
chr6 (18-81)||(18230940-18231003)
chr6 (20-107)||(18707059-18707147)
chr6 (18-94)||(25645036-25645112)
chr6 (119-195)||(19401070-19401146)
chr6 (18-90)||(18198687-18198759)
chr6 (145-196)||(18259173-18259223)
chr6 (19-102)||(23665147-23665230)
chr6 (18-64)||(18457456-18457502)
chr6 (18-64)||(22832234-22832280)
chr6 (93-209)||(25753389-25753504)
chr6 (93-209)||(25755559-25755674)
chr6 (18-78)||(23527417-23527477)
chr6 (18-81)||(18821146-18821209)
chr6 (18-81)||(20637610-20637673)
chr6 (93-195)||(25721046-25721147)
chr6 (93-195)||(34963921-34964022)
chr6 (18-64)||(11186208-11186254)
chr6 (18-64)||(16919977-16920023)
chr6 (18-64)||(18409160-18409206)
chr6 (18-64)||(19302875-19302921)
chr6 (18-56)||(20183594-20183632)
chr6 (18-64)||(21831419-21831465)
chr6 (18-56)||(22152359-22152397)
chr6 (18-64)||(22779560-22779606)
chr6 (91-196)||(23501620-23501725)
chr6 (94-195)||(25689375-25689475)
chr6 (266-307)||(16132292-16132333)
chr6 (266-307)||(19442904-19442945)
chr6 (95-195)||(25535958-25536057)
chr6 (38-70)||(16447867-16447899)
chr6 (120-195)||(17027864-17027939)
chr6 (38-70)||(21119919-21119951)
chr6 (120-195)||(22783101-22783176)
chr6 (108-152)||(27572166-27572210)
chr6 (93-196)||(31629860-31629962)
[»] chr2 (48 HSPs)
chr2 (108-303)||(34858074-34858279)
chr2 (108-303)||(34873136-34873341)
chr2 (18-116)||(25109665-25109763)
chr2 (108-195)||(27473421-27473508)
chr2 (108-191)||(20916272-20916355)
chr2 (18-105)||(22458777-22458864)
chr2 (177-307)||(34491135-34491258)
chr2 (18-116)||(23005547-23005645)
chr2 (119-196)||(24792758-24792835)
chr2 (108-209)||(24834009-24834110)
chr2 (91-231)||(357830-357969)
chr2 (21-94)||(23792074-23792147)
chr2 (245-307)||(18240889-18240951)
chr2 (176-230)||(21080934-21080988)
chr2 (18-94)||(22412414-22412490)
chr2 (20-94)||(20519421-20519495)
chr2 (18-94)||(23208093-23208170)
chr2 (176-231)||(21915657-21915712)
chr2 (245-307)||(22106367-22106429)
chr2 (17-105)||(19672643-19672732)
chr2 (18-94)||(25176584-25176660)
chr2 (176-231)||(25184222-25184277)
chr2 (176-231)||(27484453-27484508)
chr2 (176-231)||(40912353-40912408)
chr2 (132-196)||(19358879-19358944)
chr2 (18-94)||(18786111-18786187)
chr2 (18-94)||(23705582-23705658)
chr2 (18-85)||(23137850-23137917)
chr2 (18-85)||(23549640-23549707)
chr2 (93-230)||(22106206-22106342)
chr2 (245-307)||(29602200-29602262)
chr2 (190-231)||(18240824-18240865)
chr2 (18-82)||(7680038-7680102)
chr2 (145-196)||(18388189-18388240)
chr2 (18-99)||(37424-37506)
chr2 (18-64)||(23286592-23286638)
chr2 (35-94)||(21317971-21318030)
chr2 (18-81)||(23067916-23067979)
chr2 (93-195)||(23932201-23932302)
chr2 (18-81)||(28291618-28291681)
chr2 (93-195)||(32214250-32214351)
chr2 (93-194)||(6726788-6726888)
chr2 (34-64)||(23077196-23077226)
chr2 (93-194)||(24368567-24368668)
chr2 (266-307)||(6477104-6477145)
chr2 (18-86)||(6987-7055)
chr2 (33-81)||(20309851-20309899)
chr2 (38-70)||(43138183-43138215)
[»] chr8 (61 HSPs)
chr8 (108-307)||(22236931-22237137)
chr8 (18-195)||(13660854-13661032)
chr8 (18-195)||(13719497-13719675)
chr8 (18-105)||(14102439-14102526)
chr8 (108-195)||(19807394-19807481)
chr8 (18-105)||(39834453-39834540)
chr8 (18-195)||(37516482-37516659)
chr8 (18-115)||(22365431-22365528)
chr8 (20-116)||(19154090-19154186)
chr8 (171-307)||(41680011-41680157)
chr8 (38-116)||(24353861-24353939)
chr8 (38-107)||(17438751-17438820)
chr8 (176-231)||(19880855-19880910)
chr8 (176-231)||(23479115-23479170)
chr8 (176-307)||(12577912-12578052)
chr8 (17-105)||(13507320-13507409)
chr8 (17-105)||(13596852-13596941)
chr8 (18-94)||(7465005-7465081)
chr8 (176-231)||(17158927-17158982)
chr8 (176-231)||(26454741-26454796)
chr8 (245-307)||(23661407-23661469)
chr8 (18-105)||(20499380-20499468)
chr8 (18-94)||(21286963-21287039)
chr8 (119-307)||(3273866-3274059)
chr8 (176-231)||(16198869-16198924)
chr8 (18-105)||(982668-982756)
chr8 (18-94)||(17266243-17266319)
chr8 (34-115)||(19800707-19800790)
chr8 (145-195)||(20463197-20463247)
chr8 (119-194)||(42265510-42265585)
chr8 (18-81)||(6521110-6521173)
chr8 (18-100)||(19928852-19928935)
chr8 (18-81)||(21918327-21918390)
chr8 (119-196)||(22317910-22317987)
chr8 (18-99)||(5609939-5610020)
chr8 (93-196)||(24049351-24049453)
chr8 (93-196)||(32810435-32810537)
chr8 (93-195)||(1326445-1326546)
chr8 (18-81)||(5865593-5865656)
chr8 (93-195)||(16412635-16412736)
chr8 (18-100)||(16800235-16800318)
chr8 (18-81)||(17141655-17141718)
chr8 (18-81)||(31971985-31972048)
chr8 (18-115)||(40492106-40492204)
chr8 (94-195)||(19897256-19897356)
chr8 (145-195)||(20457994-20458044)
chr8 (18-64)||(21388785-21388831)
chr8 (18-64)||(22627477-22627523)
chr8 (34-64)||(23407140-23407170)
chr8 (18-64)||(28648406-28648452)
chr8 (19-99)||(21250151-21250232)
chr8 (178-231)||(23661330-23661383)
chr8 (120-195)||(5852507-5852582)
chr8 (93-196)||(20457419-20457521)
chr8 (18-50)||(20532677-20532709)
chr8 (34-82)||(20539056-20539104)
chr8 (38-70)||(26220477-26220509)
chr8 (38-70)||(26222444-26222476)
chr8 (93-196)||(27471736-27471838)
chr8 (93-196)||(32122469-32122571)
chr8 (18-54)||(38854594-38854630)
[»] chr4 (39 HSPs)
chr4 (108-307)||(10057626-10057840)
chr4 (18-196)||(27996666-27996844)
chr4 (21-196)||(19739616-19739791)
chr4 (26-305)||(14186842-14187110)
chr4 (18-117)||(32852194-32852294)
chr4 (110-209)||(26014251-26014350)
chr4 (18-94)||(52242519-52242595)
chr4 (176-231)||(15008996-15009051)
chr4 (74-195)||(13591069-13591190)
chr4 (21-108)||(46643614-46643702)
chr4 (18-115)||(15867948-15868046)
chr4 (18-94)||(53081402-53081478)
chr4 (180-231)||(40620569-40620620)
chr4 (18-85)||(43197950-43198017)
chr4 (18-107)||(12841440-12841530)
chr4 (245-307)||(19243711-19243773)
chr4 (18-105)||(11112-11200)
chr4 (245-307)||(26014404-26014466)
chr4 (18-105)||(12287443-12287534)
chr4 (18-82)||(15100070-15100134)
chr4 (18-94)||(15464232-15464308)
chr4 (18-81)||(12903487-12903550)
chr4 (18-81)||(16043833-16043896)
chr4 (18-142)||(50160960-50161085)
chr4 (93-196)||(363114-363216)
chr4 (18-81)||(3332560-3332623)
chr4 (18-81)||(7089608-7089671)
chr4 (18-81)||(13812245-13812308)
chr4 (18-57)||(14165333-14165372)
chr4 (18-81)||(15552556-15552619)
chr4 (93-231)||(19243549-19243687)
chr4 (18-81)||(24029483-24029546)
chr4 (18-99)||(14052661-14052743)
chr4 (266-307)||(12729713-12729754)
chr4 (18-94)||(39705588-39705667)
chr4 (93-196)||(3515748-3515850)
chr4 (18-50)||(14825889-14825921)
chr4 (120-195)||(19617395-19617470)
chr4 (38-70)||(54797999-54798031)
[»] chr3 (51 HSPs)
chr3 (108-307)||(52988732-52988945)
chr3 (108-307)||(14967149-14967341)
chr3 (176-307)||(15446755-15446887)
chr3 (18-107)||(324955-325044)
chr3 (110-219)||(46752073-46752182)
chr3 (18-117)||(14501942-14502042)
chr3 (108-195)||(6804892-6804979)
chr3 (18-94)||(37250417-37250493)
chr3 (157-307)||(3263842-3264001)
chr3 (176-231)||(37641468-37641523)
chr3 (18-115)||(21838250-21838347)
chr3 (119-231)||(31223816-31223921)
chr3 (22-94)||(2044957-2045029)
chr3 (22-94)||(2047686-2047758)
chr3 (179-307)||(24177612-24177752)
chr3 (180-231)||(36528904-36528955)
chr3 (18-102)||(45797965-45798050)
chr3 (18-94)||(23412476-23412551)
chr3 (18-94)||(52523030-52523106)
chr3 (176-231)||(16979945-16980000)
chr3 (176-312)||(52465256-52465390)
chr3 (18-107)||(11202097-11202187)
chr3 (20-197)||(37428492-37428669)
chr3 (17-105)||(23275439-23275528)
chr3 (18-94)||(14235239-14235315)
chr3 (18-82)||(42387131-42387195)
chr3 (245-307)||(44495650-44495712)
chr3 (18-116)||(12386213-12386303)
chr3 (18-82)||(1464746-1464810)
chr3 (18-77)||(605613-605672)
chr3 (19-105)||(40213012-40213099)
chr3 (165-231)||(1864331-1864397)
chr3 (18-64)||(18439276-18439322)
chr3 (18-102)||(22109571-22109656)
chr3 (18-99)||(22792037-22792118)
chr3 (244-307)||(1864244-1864308)
chr3 (93-196)||(12119184-12119286)
chr3 (93-195)||(46823002-46823103)
chr3 (93-194)||(13937295-13937395)
chr3 (18-56)||(14604738-14604776)
chr3 (93-194)||(38961158-38961259)
chr3 (130-196)||(40957216-40957282)
chr3 (93-194)||(41124680-41124780)
chr3 (34-64)||(43842936-43842966)
chr3 (176-231)||(44495569-44495626)
chr3 (266-307)||(17547339-17547380)
chr3 (29-70)||(43927904-43927945)
chr3 (18-50)||(13919647-13919679)
chr3 (38-70)||(21619307-21619339)
chr3 (120-195)||(24514250-24514325)
chr3 (38-70)||(36167456-36167488)
[»] scaffold0174 (1 HSPs)
scaffold0174 (108-307)||(13602-13811)
[»] chr7 (63 HSPs)
chr7 (108-307)||(46579637-46579846)
chr7 (108-195)||(11085485-11085572)
chr7 (18-116)||(14036994-14037092)
chr7 (18-116)||(14347024-14347122)
chr7 (119-231)||(30820115-30820226)
chr7 (108-195)||(11091611-11091698)
chr7 (18-116)||(14045566-14045664)
chr7 (18-116)||(14355596-14355694)
chr7 (18-196)||(15203053-15203231)
chr7 (18-116)||(1867310-1867408)
chr7 (93-231)||(36685110-36685246)
chr7 (18-105)||(16324747-16324834)
chr7 (18-94)||(15007749-15007825)
chr7 (110-195)||(14980670-14980755)
chr7 (110-195)||(15410146-15410231)
chr7 (18-105)||(15113739-15113826)
chr7 (18-105)||(15117265-15117352)
chr7 (176-231)||(19485937-19485992)
chr7 (18-115)||(12902144-12902242)
chr7 (74-195)||(9724802-9724923)
chr7 (18-94)||(12255096-12255171)
chr7 (18-94)||(22073658-22073734)
chr7 (18-94)||(47832550-47832626)
chr7 (176-231)||(16549969-16550024)
chr7 (176-231)||(16615638-16615693)
chr7 (18-94)||(16057069-16057145)
chr7 (21-114)||(20219467-20219552)
chr7 (176-231)||(29052146-29052201)
chr7 (252-307)||(36685019-36685073)
chr7 (245-307)||(5294312-5294374)
chr7 (20-116)||(9176912-9177009)
chr7 (119-197)||(11054689-11054767)
chr7 (119-196)||(15095636-15095713)
chr7 (91-196)||(8135237-8135340)
chr7 (18-83)||(15440072-15440137)
chr7 (93-231)||(5294398-5294533)
chr7 (93-195)||(8469283-8469384)
chr7 (245-307)||(5295485-5295547)
chr7 (245-307)||(5296658-5296720)
chr7 (134-196)||(15624009-15624071)
chr7 (18-105)||(2279410-2279498)
chr7 (93-212)||(5295588-5295706)
chr7 (93-212)||(5296761-5296879)
chr7 (18-94)||(16219019-16219095)
chr7 (93-195)||(8941215-8941316)
chr7 (19-102)||(9389011-9389094)
chr7 (18-81)||(10589507-10589570)
chr7 (18-81)||(16583899-16583962)
chr7 (18-81)||(26212727-26212790)
chr7 (18-81)||(27847160-27847223)
chr7 (18-81)||(34185147-34185210)
chr7 (18-81)||(34201525-34201588)
chr7 (18-81)||(39266962-39267025)
chr7 (93-194)||(11973096-11973196)
chr7 (19-64)||(3563696-3563741)
chr7 (266-307)||(8249117-8249158)
chr7 (266-307)||(10628757-10628798)
chr7 (266-307)||(10634390-10634431)
chr7 (266-307)||(10638453-10638494)
chr7 (274-307)||(30820041-30820074)
chr7 (38-70)||(10062996-10063028)
chr7 (18-50)||(11768233-11768265)
chr7 (18-50)||(17016738-17016770)
[»] chr5 (42 HSPs)
chr5 (116-307)||(26832594-26832795)
chr5 (130-307)||(10774542-10774730)
chr5 (123-307)||(21554179-21554374)
chr5 (145-307)||(21556827-21556999)
chr5 (178-312)||(30616649-30616793)
chr5 (18-92)||(22177448-22177522)
chr5 (176-231)||(17011761-17011816)
chr5 (176-231)||(31456993-31457048)
chr5 (145-231)||(17876205-17876291)
chr5 (245-307)||(22240797-22240859)
chr5 (245-307)||(22243785-22243847)
chr5 (190-307)||(22241793-22241920)
chr5 (190-307)||(22242789-22242916)
chr5 (108-168)||(19616469-19616529)
chr5 (145-196)||(21914491-21914542)
chr5 (18-85)||(26011346-26011413)
chr5 (244-307)||(36315555-36315618)
chr5 (18-105)||(21328811-21328899)
chr5 (18-94)||(22144791-22144867)
chr5 (38-115)||(21870880-21870959)
chr5 (38-115)||(21875160-21875239)
chr5 (188-231)||(29448885-29448928)
chr5 (119-196)||(21405627-21405704)
chr5 (190-231)||(22240883-22240924)
chr5 (190-231)||(22243871-22243912)
chr5 (18-105)||(20026161-20026249)
chr5 (18-81)||(22075700-22075763)
chr5 (18-55)||(22627947-22627984)
chr5 (93-195)||(2153952-2154053)
chr5 (19-70)||(5888502-5888553)
chr5 (18-81)||(8286191-8286254)
chr5 (34-81)||(13026020-13026067)
chr5 (34-81)||(13096204-13096251)
chr5 (93-195)||(29330714-29330815)
chr5 (18-64)||(9078694-9078740)
chr5 (21-55)||(21740885-21740919)
chr5 (36-81)||(21985485-21985530)
chr5 (266-307)||(27767844-27767885)
chr5 (245-274)||(41094729-41094758)
chr5 (120-195)||(17516290-17516365)
chr5 (38-70)||(18318297-18318329)
chr5 (18-94)||(27988204-27988280)
[»] chr1 (47 HSPs)
chr1 (108-231)||(21995628-21995751)
chr1 (18-116)||(27652469-27652567)
chr1 (132-307)||(12327621-12327807)
chr1 (20-117)||(50687389-50687486)
chr1 (18-105)||(12272365-12272452)
chr1 (18-117)||(21342867-21342967)
chr1 (18-117)||(21347732-21347832)
chr1 (18-115)||(16093099-16093197)
chr1 (177-307)||(24007103-24007243)
chr1 (132-307)||(51336467-51336660)
chr1 (18-102)||(16381910-16381995)
chr1 (18-105)||(16759468-16759556)
chr1 (176-231)||(29763596-29763651)
chr1 (18-94)||(22921170-22921246)
chr1 (18-94)||(41049272-41049348)
chr1 (176-231)||(46197709-46197764)
chr1 (176-223)||(50001509-50001556)
chr1 (18-80)||(16367529-16367591)
chr1 (119-196)||(22350692-22350769)
chr1 (18-115)||(35260359-35260457)
chr1 (18-107)||(48521287-48521377)
chr1 (120-195)||(21708126-21708201)
chr1 (120-195)||(21712669-21712744)
chr1 (18-116)||(50613316-50613415)
chr1 (18-116)||(50621144-50621243)
chr1 (245-307)||(22145550-22145612)
chr1 (18-94)||(21857189-21857265)
chr1 (132-196)||(51476981-51477046)
chr1 (18-82)||(33681752-33681816)
chr1 (18-82)||(52927365-52927429)
chr1 (19-102)||(28193748-28193831)
chr1 (18-81)||(38800718-38800781)
chr1 (165-231)||(23592908-23592974)
chr1 (18-72)||(35981012-35981066)
chr1 (256-299)||(21995550-21995593)
chr1 (18-81)||(27250056-27250119)
chr1 (19-102)||(49261867-49261950)
chr1 (244-274)||(23592855-23592885)
chr1 (165-231)||(41373392-41373458)
chr1 (145-195)||(44822021-44822071)
chr1 (266-307)||(13527582-13527623)
chr1 (18-67)||(22777239-22777288)
chr1 (34-63)||(50209548-50209577)
chr1 (120-195)||(14237655-14237730)
chr1 (93-196)||(22050349-22050451)
chr1 (33-81)||(34510538-34510586)
chr1 (120-195)||(46560055-46560130)
[»] scaffold0153 (4 HSPs)
scaffold0153 (108-220)||(5262-5374)
scaffold0153 (108-220)||(12282-12394)
scaffold0153 (245-307)||(5411-5471)
scaffold0153 (245-307)||(12431-12491)
[»] scaffold0686 (2 HSPs)
scaffold0686 (108-303)||(1404-1608)
scaffold0686 (21-116)||(2058-2154)
[»] scaffold0071 (1 HSPs)
scaffold0071 (176-307)||(15305-15437)
[»] scaffold0577 (1 HSPs)
scaffold0577 (119-311)||(9036-9243)
[»] scaffold0074 (1 HSPs)
scaffold0074 (108-196)||(1903-1991)
[»] scaffold0072 (2 HSPs)
scaffold0072 (18-105)||(62418-62505)
scaffold0072 (18-50)||(58612-58644)
[»] scaffold0032 (1 HSPs)
scaffold0032 (108-195)||(68262-68349)
[»] scaffold0076 (1 HSPs)
scaffold0076 (18-116)||(22576-22674)
[»] scaffold0338 (1 HSPs)
scaffold0338 (18-196)||(10761-10939)
[»] scaffold0819 (1 HSPs)
scaffold0819 (130-307)||(5352-5540)
[»] scaffold0331 (1 HSPs)
scaffold0331 (108-210)||(12100-12202)
[»] scaffold0001 (1 HSPs)
scaffold0001 (18-196)||(498933-499111)
[»] scaffold0395 (2 HSPs)
scaffold0395 (108-196)||(11854-11942)
scaffold0395 (18-81)||(278-341)
[»] scaffold0357 (3 HSPs)
scaffold0357 (20-116)||(4743-4839)
scaffold0357 (18-115)||(13947-14045)
scaffold0357 (30-105)||(15417-15493)
[»] scaffold0180 (2 HSPs)
scaffold0180 (20-116)||(33747-33843)
scaffold0180 (145-195)||(28329-28379)
[»] scaffold0123 (1 HSPs)
scaffold0123 (18-117)||(25875-25974)
[»] scaffold0016 (2 HSPs)
scaffold0016 (18-195)||(118755-118930)
scaffold0016 (93-194)||(185010-185110)
[»] scaffold0009 (1 HSPs)
scaffold0009 (18-105)||(86336-86423)
[»] scaffold0065 (1 HSPs)
scaffold0065 (108-196)||(55906-55994)
[»] scaffold0026 (3 HSPs)
scaffold0026 (108-195)||(22141-22228)
scaffold0026 (146-195)||(10103-10152)
scaffold0026 (34-78)||(40614-40658)
[»] scaffold0379 (2 HSPs)
scaffold0379 (108-196)||(3892-3981)
scaffold0379 (111-196)||(13886-13972)
[»] scaffold0104 (2 HSPs)
scaffold0104 (162-307)||(14976-15131)
scaffold0104 (162-307)||(16996-17151)
[»] scaffold0098 (1 HSPs)
scaffold0098 (18-117)||(29504-29604)
[»] scaffold0037 (2 HSPs)
scaffold0037 (245-307)||(81690-81752)
scaffold0037 (245-307)||(83108-83170)
[»] scaffold0261 (1 HSPs)
scaffold0261 (18-117)||(17544-17644)
[»] scaffold0006 (2 HSPs)
scaffold0006 (22-107)||(97827-97912)
scaffold0006 (22-107)||(107105-107190)
[»] scaffold1403 (1 HSPs)
scaffold1403 (18-94)||(1316-1392)
[»] scaffold0138 (4 HSPs)
scaffold0138 (176-231)||(21130-21185)
scaffold0138 (176-231)||(34145-34200)
scaffold0138 (18-94)||(13656-13732)
scaffold0138 (18-94)||(17465-17541)
[»] scaffold0040 (4 HSPs)
scaffold0040 (18-115)||(102867-102965)
scaffold0040 (18-56)||(22993-23031)
scaffold0040 (93-195)||(20585-20686)
scaffold0040 (18-56)||(14137-14175)
[»] scaffold0529 (1 HSPs)
scaffold0529 (18-219)||(4041-4241)
[»] scaffold0022 (2 HSPs)
scaffold0022 (21-94)||(81071-81144)
scaffold0022 (38-70)||(117355-117387)
[»] scaffold0780 (1 HSPs)
scaffold0780 (26-195)||(2471-2641)
[»] scaffold0507 (1 HSPs)
scaffold0507 (18-94)||(7360-7436)
[»] scaffold0333 (2 HSPs)
scaffold0333 (18-94)||(7355-7431)
scaffold0333 (18-94)||(14735-14811)
[»] scaffold0012 (1 HSPs)
scaffold0012 (18-94)||(228212-228288)
[»] scaffold0515 (1 HSPs)
scaffold0515 (176-231)||(5062-5117)
[»] scaffold0306 (1 HSPs)
scaffold0306 (176-231)||(5062-5117)
[»] scaffold0058 (1 HSPs)
scaffold0058 (176-231)||(6401-6456)
[»] scaffold0057 (1 HSPs)
scaffold0057 (176-231)||(69817-69872)
[»] scaffold0020 (1 HSPs)
scaffold0020 (20-94)||(15133-15207)
[»] scaffold0462 (1 HSPs)
scaffold0462 (183-231)||(11263-11311)
[»] scaffold0273 (1 HSPs)
scaffold0273 (18-94)||(8741-8817)
[»] scaffold0235 (1 HSPs)
scaffold0235 (18-94)||(14382-14458)
[»] scaffold0114 (2 HSPs)
scaffold0114 (18-105)||(46330-46418)
scaffold0114 (33-81)||(32641-32689)
[»] scaffold0005 (2 HSPs)
scaffold0005 (18-94)||(268446-268522)
scaffold0005 (18-50)||(13788-13820)
[»] scaffold0632 (1 HSPs)
scaffold0632 (176-231)||(1198-1253)
[»] scaffold0320 (1 HSPs)
scaffold0320 (18-108)||(12737-12828)
[»] scaffold0083 (1 HSPs)
scaffold0083 (176-231)||(1970-2025)
[»] scaffold0046 (1 HSPs)
scaffold0046 (176-231)||(21741-21796)
[»] scaffold0034 (2 HSPs)
scaffold0034 (176-231)||(29180-29235)
scaffold0034 (18-50)||(33255-33287)
[»] scaffold0436 (1 HSPs)
scaffold0436 (176-230)||(8993-9047)
[»] scaffold0139 (2 HSPs)
scaffold0139 (177-307)||(23568-23708)
scaffold0139 (18-116)||(39113-39212)
[»] scaffold2004 (1 HSPs)
scaffold2004 (18-94)||(155-231)
[»] scaffold0165 (1 HSPs)
scaffold0165 (18-105)||(26933-27021)
[»] scaffold0162 (1 HSPs)
scaffold0162 (18-94)||(25574-25650)
[»] scaffold0120 (3 HSPs)
scaffold0120 (18-94)||(32263-32339)
scaffold0120 (18-94)||(46667-46743)
scaffold0120 (36-81)||(16846-16891)
[»] scaffold0008 (2 HSPs)
scaffold0008 (18-105)||(13841-13929)
scaffold0008 (119-196)||(135503-135580)
[»] scaffold0970 (1 HSPs)
scaffold0970 (18-115)||(1326-1425)
[»] scaffold0156 (1 HSPs)
scaffold0156 (176-231)||(16637-16692)
[»] scaffold0151 (1 HSPs)
scaffold0151 (145-196)||(31110-31161)
[»] scaffold1439 (1 HSPs)
scaffold1439 (245-307)||(1184-1246)
[»] scaffold0254 (2 HSPs)
scaffold0254 (245-307)||(21759-21821)
scaffold0254 (93-231)||(21597-21735)
[»] scaffold0090 (1 HSPs)
scaffold0090 (18-116)||(2808-2906)
[»] scaffold0877 (1 HSPs)
scaffold0877 (119-196)||(1170-1247)
[»] scaffold0530 (1 HSPs)
scaffold0530 (18-105)||(319-407)
[»] scaffold0420 (1 HSPs)
scaffold0420 (18-94)||(5560-5636)
[»] scaffold0243 (1 HSPs)
scaffold0243 (18-94)||(5425-5501)
[»] scaffold0075 (1 HSPs)
scaffold0075 (18-105)||(50835-50923)
[»] scaffold0007 (2 HSPs)
scaffold0007 (148-196)||(158821-158869)
scaffold0007 (63-115)||(17186-17238)
[»] scaffold1992 (1 HSPs)
scaffold1992 (18-81)||(535-598)
[»] scaffold0494 (1 HSPs)
scaffold0494 (93-195)||(36-137)
[»] scaffold0010 (1 HSPs)
scaffold0010 (20-95)||(59985-60060)
[»] scaffold0231 (1 HSPs)
scaffold0231 (20-94)||(11150-11224)
[»] scaffold0175 (1 HSPs)
scaffold0175 (119-196)||(8618-8695)
[»] scaffold0621 (1 HSPs)
scaffold0621 (22-105)||(9291-9375)
[»] scaffold0476 (1 HSPs)
scaffold0476 (18-94)||(8521-8597)
[»] scaffold0413 (1 HSPs)
scaffold0413 (18-105)||(13386-13474)
[»] scaffold1792 (1 HSPs)
scaffold1792 (93-195)||(1099-1200)
[»] scaffold0389 (1 HSPs)
scaffold0389 (18-81)||(12974-13037)
[»] scaffold0351 (1 HSPs)
scaffold0351 (18-81)||(17080-17143)
[»] scaffold0230 (1 HSPs)
scaffold0230 (93-195)||(22700-22801)
[»] scaffold1842 (1 HSPs)
scaffold1842 (19-81)||(376-438)
[»] scaffold0601 (1 HSPs)
scaffold0601 (17-114)||(7451-7549)
[»] scaffold0056 (1 HSPs)
scaffold0056 (18-64)||(16546-16592)
[»] scaffold0011 (1 HSPs)
scaffold0011 (19-81)||(167306-167368)
[»] scaffold0116 (1 HSPs)
scaffold0116 (132-196)||(35463-35528)
[»] scaffold0737 (1 HSPs)
scaffold0737 (18-94)||(1026-1102)
[»] scaffold0574 (1 HSPs)
scaffold0574 (93-196)||(7192-7294)
[»] scaffold0253 (1 HSPs)
scaffold0253 (33-81)||(3626-3674)
[»] scaffold0145 (1 HSPs)
scaffold0145 (108-140)||(10701-10733)
[»] scaffold0130 (1 HSPs)
scaffold0130 (18-105)||(995-1083)
[»] scaffold0078 (1 HSPs)
scaffold0078 (18-66)||(11270-11318)
[»] scaffold0028 (1 HSPs)
scaffold0028 (119-194)||(3053-3128)
[»] scaffold0711 (1 HSPs)
scaffold0711 (93-195)||(6897-6998)
[»] scaffold0598 (1 HSPs)
scaffold0598 (18-81)||(379-442)
[»] scaffold0439 (1 HSPs)
scaffold0439 (91-154)||(12343-12405)
[»] scaffold0394 (1 HSPs)
scaffold0394 (145-196)||(7513-7564)
[»] scaffold0247 (1 HSPs)
scaffold0247 (18-81)||(6142-6205)
[»] scaffold0149 (1 HSPs)
scaffold0149 (93-195)||(34237-34338)
[»] scaffold0064 (1 HSPs)
scaffold0064 (33-99)||(47636-47703)
[»] scaffold0035 (2 HSPs)
scaffold0035 (93-195)||(107216-107317)
scaffold0035 (120-195)||(115743-115818)
[»] scaffold0627 (1 HSPs)
scaffold0627 (34-64)||(662-692)
[»] scaffold0555 (1 HSPs)
scaffold0555 (18-72)||(9892-9946)
[»] scaffold0480 (1 HSPs)
scaffold0480 (18-56)||(10210-10248)
[»] scaffold0411 (1 HSPs)
scaffold0411 (162-196)||(13416-13450)
[»] scaffold0352 (1 HSPs)
scaffold0352 (18-64)||(17337-17383)
[»] scaffold0347 (2 HSPs)
scaffold0347 (34-64)||(785-815)
scaffold0347 (18-50)||(9676-9708)
[»] scaffold0121 (1 HSPs)
scaffold0121 (34-64)||(7865-7895)
[»] scaffold0106 (2 HSPs)
scaffold0106 (38-99)||(2038-2100)
scaffold0106 (38-99)||(8015-8077)
[»] scaffold1419 (1 HSPs)
scaffold1419 (18-102)||(832-917)
[»] scaffold0848 (1 HSPs)
scaffold0848 (91-195)||(2021-2124)
[»] scaffold0308 (1 HSPs)
scaffold0308 (112-196)||(13409-13493)
[»] scaffold0251 (1 HSPs)
scaffold0251 (120-196)||(20085-20161)
[»] scaffold0003 (1 HSPs)
scaffold0003 (18-63)||(339284-339329)
[»] scaffold0708 (1 HSPs)
scaffold0708 (18-50)||(1747-1779)
[»] scaffold0456 (1 HSPs)
scaffold0456 (33-81)||(9753-9801)
[»] scaffold0322 (1 HSPs)
scaffold0322 (120-195)||(18704-18779)
[»] scaffold0122 (1 HSPs)
scaffold0122 (19-63)||(25398-25442)
[»] scaffold0102 (1 HSPs)
scaffold0102 (34-94)||(47764-47824)
[»] scaffold0088 (1 HSPs)
scaffold0088 (33-61)||(21620-21648)
[»] scaffold0047 (1 HSPs)
scaffold0047 (18-50)||(22699-22731)


Alignment Details
Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 307
Target Start/End: Complemental strand, 28103625 - 28103336
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaacc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28103625 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaacc 28103526  T
Q  118 tcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctct 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28103525 tcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctct 28103426  T
Q  218 ctccctcttggttcnnnnnnnnncttgttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28103425 ctccctcttggttctttttttttcttgttttctccaaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatatctct 28103336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 108 - 307
Target Start/End: Complemental strand, 20733331 - 20733122
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||    
T  20733331 ttctaaaacctcaacctacaaccatgttaaatttatcttcagaatcacatactcaaaattattgaaggttagtctcacccttaccttagtattgatgatc 20733232  T
Q  208 ggcggtctctctccctcttggttcnnnnnnnnncttgttt----------tctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctcc 297  Q
     |||||||||||||||||||||||         |||||||          |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20733231 agcggtctctctccctcttggttctcctcttctcttgttttctccctttatctccaaaaagcagtttcacgtaaaaacttttctaaacctagtttcctcc 20733132  T
Q  298 ttatatctct 307  Q
    ||||||||||    
T  20733131 ttatatctct 20733122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 108 - 307
Target Start/End: Original strand, 27852171 - 27852380
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  27852171 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatacttagaatgattgaaggttagtcccacccttaccttagtattgatgatc 27852270  T
Q  208 ggcggtctctctccctcttggttcnnnnnnnnncttg----------ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctcc 297  Q
     |||||||||||||||||||||||         ||||          ||||||||||||||||||||||| |||||||||||||| || |||||||||||    
T  27852271 agcggtctctctccctcttggttctcctcttctcttgttttctccctttttctccaaaaagcagtttcacttaaaaacttttctatacctagtttcctcc 27852370  T
Q  298 ttatatctct 307  Q
    ||||||||||    
T  27852371 ttatatctct 27852380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 22375977 - 22375799
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa--cctaattctccaattttctaaaa 115  Q
    ||||||||||||||| | | |||||||||||||  ||||  |||||||||  ||| |||||||| |||||||| |  |||||||||| ||||  ||||||    
T  22375977 tatctaaggtctgtacatagtttctacatcaattcaacagtttttcatcatctaatcatcaattcctcacttttaaccctaattctcaaatt--ctaaaa 22375880  T
Q  116 cctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |  ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22375879 ctccaacctacaaccatgttaaattcaatttcagaatcacatactcagaattattgaaggttagtcccacccttaccttag 22375799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 35011947 - 35012029
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctc 102  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  35011947 tctaaggtctgtacacagtttctacatcaatctaacaatttttcatcaattaatcatcaatttctcactttaacctaattctc 35012029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 23539715 - 23539798
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcac-tttaacctaattctc 102  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  23539715 tctaaggtctgtatacagtttctacatcaatctaacaacttttcatcaattaatcatcaatttctcacttttaacctaattctc 23539798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 23077501 - 23077597
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| || |||| || |||||    
T  23077501 tctaaggtctttacacaatttctacatcaatctaacaatttttcatcaattaatcaacaatttctcactttaacctaattatcaaattctcaaaaac 23077597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 19024171 - 19024271
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaac 116  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||| |   ||||||||||||||| |||||||||| |||| ||||||||    
T  19024171 tatctaaggtctgtaaacagttcctacatcaatctaacaatttttcatcaattaatcccaaatttctcactttaaccctaattctcaaattctctaaaac 19024270  T
Q  117 c 117  Q
    |    
T  19024271 c 19024271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 16246101 - 16246294
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaacc 117  Q
    ||||||||||||||| ||||||||||||| |||   |||  |||| ||||||||| |||||||| ||||||  || ||    ||| ||||  |||||| |    
T  16246101 tatctaaggtctgtacacaatttctacattaattcgacagttttttatcaattaatcatcaattcctcact--aatct----ctcaaatt--ctaaaaac 16246192  T
Q  118 tcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctct 217  Q
    |||| ||||||||||||||||||||  || ||||| | | ||||| ||||||||||| ||||||||||||||||||||| ||| | ||||||| | ||||    
T  16246193 tcaatctacaaccatgttaaattcaattttagaattagaaactcataattattgaaggttagtcccacccttaccttaggattcacgatcggcaggctct 16246292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 19669197 - 19669278
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaatt 99  Q
    ||||||||||||||| ||| |||||||||||||||||| | | | |||||||||| ||||||||||||||||||||||||||    
T  19669197 tatctaaggtctgtatacagtttctacatcaatctaaccattctacatcaattaatcatcaatttctcactttaacctaatt 19669278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 15173472 - 15173417
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15173472 ttagtcccaccattaccttagtattgatgatcggcggtctctctccctcttggttc 15173417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 9097828 - 9097740
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    ||||||||||||||||||| |||||||||||||||||||  | | |||||||||| | |||||||||| |||||| |||||||||||||    
T  9097828 tatctaaggtctgtaaacagtttctacatcaatctaacagttctacatcaattaatcctcaatttctctctttaaccctaattctccaa 9097740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 18697308 - 18697396
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcac-tttaacctaattctccaatt 107  Q
    |||||||||| || |||||||||||||||||||||||  |||||||||  ||| |||||||| ||||| ||||||||||||||||||||    
T  18697308 tctaaggtctatacacaatttctacatcaatctaacactttttcatcatctaatcatcaattcctcacttttaacctaattctccaatt 18697396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 18231346 - 18231409
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| ||||||||    
T  18231346 tatctaaggtctgtacacggtttctacatcaatctaacaacttttcatcaattaatcatcaatt 18231409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 16966641 - 16966819
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcacttt--aacctaattctccaattttctaaaa 115  Q
    ||||||||||||||| ||| |||||||||||||  ||||  ||| |||||  ||  ||||||||| |||||||  || ||||| | | ||||  ||||||    
T  16966641 tatctaaggtctgtacacagtttctacatcaattcaacagttttccatcatctagtcatcaatttatcacttttaaaactaatccccaaatt--ctaaaa 16966738  T
Q  116 cctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |  ||||||||||||||||||||||||  |||||| ||||||||| |  |||||| ||| |||||| |||||||| |||||    
T  16966739 ctacaacctacaaccatgttaaattcaatttcagagtcacatacttaagattattaaaggttagtctcacccttaacttag 16966819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 15900666 - 15900618
Alignment:
Q  183 cacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15900666 cacccttaccttagtattgaagatcggcggtctctctccctcttggttc 15900618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 307
Target Start/End: Complemental strand, 27330000 - 27329858
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttg----------ttttctccaaaaagcagtttc 265  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||         ||||          |||||||||||||||||||||    
T  27330000 ttagtcacactcttaccttagtattgatgatcggcggtctctctccctctgggttctcttcttttcttgttttctccctttttctccaaaaagcagtttc 27329901  T
Q  266 acgt-aaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||| |||||   |||||||| |||||||||||||||||||||    
T  27329900 acgtaaaaaaaaattctaaacctagtttcctccttatatctct 27329858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 307
Target Start/End: Complemental strand, 27390740 - 27390598
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttg----------ttttctccaaaaagcagtttc 265  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||         ||||          |||||||||||||||||||||    
T  27390740 ttagtcacactcttaccttagtattgatgatcggcggtctctctccctctgggttctcttcttttcttgttttctccctttttctccaaaaagcagtttc 27390641  T
Q  266 acgt-aaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||| |||||   |||||||| |||||||||||||||||||||    
T  27390640 acgtaaaaaaaaattctaaacctagtttcctccttatatctct 27390598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 18230940 - 18231003
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||| |||||| ||||||||    
T  18230940 tatctaaggtctgtacacggtttctacatcaatctaacaacttttcatgaattaatcatcaatt 18231003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 18707059 - 18707147
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcac-tttaacctaattctccaatt 107  Q
    |||||| |||||| ||| ||| |||||||||||||||  |||||||||  ||| |||||||| ||||| ||||||||||||||||||||    
T  18707059 tctaagatctgtacacagtttttacatcaatctaacactttttcatcatctaatcatcaattcctcacttttaacctaattctccaatt 18707147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 25645036 - 25645112
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| |||||||||||||||||| | | | |||||||||| | |||||||||| | ||||||    
T  25645036 tatctaaggtctgtaaacagtttctacatcaatctaaccattctacatcaattaatcctcaatttctctcattaacc 25645112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 19401070 - 19401146
Alignment:
Q  119 caacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||||| ||||||||||| | |||||||||| | ||| ||||||| ||||| ||||||||||||||||||||    
T  19401070 caacctacaacc-tgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttacctta 19401146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 18198759 - 18198687
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcacttt 90  Q
    ||||||||||| ||  ||| |||||||||||||||||||| |||||||||  ||| |||||||| ||||||||    
T  18198759 tatctaaggtccgtgcacagtttctacatcaatctaacaatttttcatcatctaatcatcaattcctcacttt 18198687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 18259223 - 18259173
Alignment:
Q  145 ttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |||||||||| || |||||||||||||||| |||||||||||||||||||||    
T  18259223 ttcagaatca-atgctcagaattattgaaggttagtcccacccttaccttag 18259173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 23665230 - 23665147
Alignment:
Q  19 atctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctc 102  Q
    ||||||||||||||| || |||||||||||||||||  | | ||||||||||   || |||||  |||||||||||||||||||    
T  23665230 atctaaggtctgtaaccagtttctacatcaatctaatcattattcatcaatttctcaccaattcttcactttaacctaattctc 23665147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 18457456 - 18457502
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||    
T  18457456 tatctaaggtctaggaacaatttctacatcaatctaacaacttttca 18457502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 22832234 - 22832280
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||    
T  22832234 tatctaaggtctaggaacaatttctacatcaatctaacaacttttca 22832280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 25753389 - 25753504
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  25753389 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 25753486  T
Q  192 cttagtattgatgatcgg 209  Q
    ||||  ||| ||||||||    
T  25753487 cttaagattaatgatcgg 25753504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 25755559 - 25755674
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  25755559 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 25755656  T
Q  192 cttagtattgatgatcgg 209  Q
    ||||  ||| ||||||||    
T  25755657 cttaagattaatgatcgg 25755674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 23527477 - 23527417
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatca 78  Q
    ||||||||||||||| ||| |||||||||||||  | ||| |||||||||||||| |||||    
T  23527477 tatctaaggtctgtacacactttctacatcaattcagcaatttttcatcaattaatcatca 23527417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 18821209 - 18821146
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||||||||||||||| ||||||||||||||| |  |||| ||||||||    
T  18821209 tatctaaggtctaggaacaatttctacatcattctaacaacttttcaccgtttaatcatcaatt 18821146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 20637673 - 20637610
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||||||||||||||| |||||||| |||||| | ||||| ||||||||    
T  20637673 tatctaaggtctaggaacaatttctacatcattctaacaagttttcaccgattaatcatcaatt 20637610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 25721046 - 25721147
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  25721046 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 25721143  T
Q  192 ctta 195  Q
    ||||    
T  25721144 ctta 25721147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 34963921 - 34964022
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  34963921 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 34964018  T
Q  192 ctta 195  Q
    ||||    
T  34964019 ctta 34964022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 11186208 - 11186254
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   |||| |||||||||||||||||||||||||||    
T  11186208 tatctaaggtctaggaacagtttctacatcaatctaacaacttttca 11186254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 16920023 - 16919977
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   |||| |||||||||||||||||||||||||||    
T  16920023 tatctaaggtctaggaacagtttctacatcaatctaacaacttttca 16919977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 18409206 - 18409160
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   |||| |||||||||||||||||||||||||||    
T  18409206 tatctaaggtctaggaacagtttctacatcaatctaacaacttttca 18409160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 19302921 - 19302875
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    |||||||||||| |  ||| |||||||||||||||||||||||||||    
T  19302921 tatctaaggtctatgtacattttctacatcaatctaacaacttttca 19302875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 20183594 - 20183632
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaaca 56  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  20183594 tatctaaggtctgtacacagtttctacatcaatctaaca 20183632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 21831419 - 21831465
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   |||| |||||||||||||||||||||||||||    
T  21831419 tatctaaggtctaggaacagtttctacatcaatctaacaacttttca 21831465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 22152397 - 22152359
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaaca 56  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  22152397 tatctaaggtctgtacacagtttctacatcaatctaaca 22152359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 22779606 - 22779560
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   |||||||||||||||||||||||| |||||||    
T  22779606 tatctaaggtctaggaacaatttctacatcaatctaacatcttttca 22779560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 196
Target Start/End: Original strand, 23501620 - 23501725
Alignment:
Q  91 aacctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccaccctt 189  Q
    |||||||||| | ||||| | |||||  |||||||||||  ||||||||||| | |||||||| | | | | ||||||||||||| |||||| |||||||    
T  23501620 aacctaattcccaaatttccaaaaactacaacctacaact-tgttaaattcagttttcagaattaaacatttagaattattgaaggttagtctcaccctt 23501718  T
Q  190 accttag 196  Q
    |||||||    
T  23501719 accttag 23501725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 25689375 - 25689475
Alignment:
Q  94 ctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacc 192  Q
    ||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  |||||||||||||||||    
T  25689375 ctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacc 25689472  T
Q  193 tta 195  Q
    |||    
T  25689473 tta 25689475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 16132333 - 16132292
Alignment:
Q  266 acgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  16132333 acgtgaaaacttttctaaacctagtttcctctttatatctct 16132292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 19442945 - 19442904
Alignment:
Q  266 acgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  19442945 acgtgaaaacttttctaaacctagtttcctctttatatctct 19442904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 195
Target Start/End: Original strand, 25535958 - 25536057
Alignment:
Q  95 taattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacct 193  Q
    |||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||||    
T  25535958 taattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacct 25536055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 16447899 - 16447867
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaatt 70  Q
    |||||||||||||||||||| ||||||||||||    
T  16447899 tttctacatcaatctaacaatttttcatcaatt 16447867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 17027939 - 17027864
Alignment:
Q  120 aacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||||||    
T  17027939 aacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 17027864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 21119951 - 21119919
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaatt 70  Q
    |||||||||||||||||||| ||||||||||||    
T  21119951 tttctacatcaatctaacaatttttcatcaatt 21119919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 22783101 - 22783176
Alignment:
Q  120 aacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||||||    
T  22783101 aacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 22783176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 27572210 - 27572166
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaat 152  Q
    ||||||||| | |||||||||||||||||||||||  ||||||||    
T  27572210 ttctaaaactttaacctacaaccatgttaaattcaatttcagaat 27572166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 31629962 - 31629860
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  |||||| |||||||||    
T  31629962 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttac 31629865  T
Q  192 cttag 196  Q
    |||||    
T  31629864 cttag 31629860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 9e-64; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 108 - 303
Target Start/End: Complemental strand, 34858279 - 34858074
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  34858279 ttctaaaacctcaacctaaaaccatgttaaattcatcttcagaatcacatactcaaaattattgaaggttagtcccacccttaccttagtattgatgatc 34858180  T
Q  208 ggcggtctctctccctcttggttcnnnnnnnnncttgttttctc----------caaaaagcagtttcacgtaaaaacttttctaaacttagtttcctcc 297  Q
    |||||||||||||||||||||||          |||||||||||          |||||||||||||||||||||||||||||||||| |||||||||||    
T  34858179 ggcggtctctctccctcttggttatcttcttttcttgttttctccctttttcttcaaaaagcagtttcacgtaaaaacttttctaaacctagtttcctcc 34858080  T
Q  298 ttatat 303  Q
    ||||||    
T  34858079 ttatat 34858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 108 - 303
Target Start/End: Complemental strand, 34873341 - 34873136
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  34873341 ttctaaaacctcaacctaaaaccatgttaaattcatcttcagaatcacatactcaaaattattgaaggttagtcccacccttaccttagtattgatgatc 34873242  T
Q  208 ggcggtctctctccctcttggttcnnnnnnnnncttgttttctc----------caaaaagcagtttcacgtaaaaacttttctaaacttagtttcctcc 297  Q
    |||||||||||||||||||||||          |||||||||||          |||||||||||||||||||||||||||||||||| |||||||||||    
T  34873241 ggcggtctctctccctcttggttatcttcttttcttgttttctccctttttcttcaaaaagcagtttcacgtaaaaacttttctaaacctagtttcctcc 34873142  T
Q  298 ttatat 303  Q
    ||||||    
T  34873141 ttatat 34873136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 25109665 - 25109763
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  25109665 tatctaaggtctgtacacattttctacatcaatctaacaacttttcatcaattaatcatcaatttctcacttttacctaattctccaattctctaaaac 25109763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 27473421 - 27473508
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  27473421 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcataattattgaaggttagtcccacccttaactta 27473508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 20916272 - 20916355
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  20916272 ttctaaaacatcaacctacaaccatgttaaattcatcttcaaaatcacatactcagaattattgaaggttagttccacccttac 20916355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 22458864 - 22458777
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaa 105  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||| ||||||||||| |||||||||||    
T  22458864 tatctaaggtctgtaaacagtttctacatcaatctaacaacttttcatcaattaattatcaattcctcactttaacataattctccaa 22458777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 307
Target Start/End: Complemental strand, 34491258 - 34491135
Alignment:
Q  177 tagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttgttttctccaaaaagcagtttcacgtaaaaact 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||          |  |||||||| |||| ||||||||||||||||||    
T  34491258 tagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttctct-------tatttttctcccaaaatcagtttcacgtaaaaact 34491166  T
Q  277 tttctaaacttagtttcctccttatatctct 307  Q
    ||||||||  ||||||||||||| |||||||    
T  34491165 tttctaaatatagtttcctccttttatctct 34491135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 23005547 - 23005645
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    ||||||||||||||||||| ||||||||| ||| |||||| |||||||||||||| |||||||||||| |||||||||||||||| |||| ||||||||    
T  23005547 tatctaaggtctgtaaacagtttctacataaatttaacaatttttcatcaattaatcatcaatttctccctttaacctaattctcaaattctctaaaac 23005645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 24792835 - 24792758
Alignment:
Q  119 caacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24792835 caacctacaaccatgttaaattcagtttcagaatcacatactcagaattattgaaggttagtcccacccttaccttag 24792758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 24834110 - 24834009
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    |||||||||  ||||||||||||||||||||||||  ||| |||||||||||||||||||||||| | ||||||||||||||||||||| ||| | ||||    
T  24834110 ttctaaaactccaacctacaaccatgttaaattcaatttcggaatcacatactcagaattattgatggttagtcccacccttaccttaggattaacgatc 24834011  T
Q  208 gg 209  Q
    ||    
T  24834010 gg 24834009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 357830 - 357969
Alignment:
Q  91 aacctaattctccaattttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacata-ctcagaattattgaagattagtcccaccctt 189  Q
    |||||||||| |||| |||| |||||  |||||||| ||| |||||||| ||  |||||||||| | | || |||||||  |||  ||||||||||||||    
T  357830 aacctaattc-ccaaatttcaaaaactacaacctaccacc-tgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtcccaccctt 357927  T
Q  190 accttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  357928 accttagtattgatgatcggcggtctctctccctcttggttc 357969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 23792074 - 23792147
Alignment:
Q  21 ctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  23792074 ctaaggtctgtacacagtttctacatcaatctaacaatttttcatcaattaatcatcaatttctcactttaacc 23792147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 18240889 - 18240951
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  18240889 ttttctccaaaaagcagtttcacttaaaaacttttctaaacctagtttcctccttatatctct 18240951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 21080988 - 21080934
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggtt 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21080988 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggtt 21080934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 22412490 - 22412414
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| |||||||||||||| ||||| | | |||||||||| |||||||||||||||||||||    
T  22412490 tatctaaggtctgtaaacagtttctacatcaatccaacaaatctacatcaattaatcatcaatttctcactttaacc 22412414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 20519495 - 20519421
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||| |||||| |||||||||||||||||||| | | |||||||||| |||||||||||||||||||||    
T  20519495 tctaaggtctataaacagtttctacatcaatctaacaattctacatcaattaatcatcaatttctcactttaacc 20519421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 23208093 - 23208170
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaa-tttctcactttaacc 94  Q
    ||||||||||||||||||| |||||||||||||||||||| | | |||||||||| |||||| |||||||||||||||    
T  23208093 tatctaaggtctgtaaacagtttctacatcaatctaacaattctacatcaattaatcatcaattttctcactttaacc 23208170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 21915657 - 21915712
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21915657 ttagtcacacccttactttagtattgatgatcggcggtctctctccctcttggttc 21915712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 22106367 - 22106429
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||| || |||||||||||    
T  22106367 ttttctccaaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctct 22106429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 19672643 - 19672732
Alignment:
Q  17 atatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcacttt-aacctaattctccaa 105  Q
    |||||||||| ||||||||| ||||||||||||||||||   | | |||||||||| | ||||||||||||||| |||||||||||||||    
T  19672643 atatctaaggcctgtaaacagtttctacatcaatctaactgttctacatcaattaatcctcaatttctcactttaaacctaattctccaa 19672732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 25176584 - 25176660
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||   |||||||||| | ||||||    
T  25176584 tatctaagttctgtaaacaatttctacatcaatctaaaaacttttcatccattaattctcaatttctctcattaacc 25176660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 25184222 - 25184277
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  25184222 ttagtctcacccttaccttagtattgatgattggcggtctctctccctcttcgttc 25184277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 27484508 - 27484453
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  27484508 ttagtctcacccttaccttagtattgatgatcggtggtatctctccctcttggttc 27484453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 40912353 - 40912408
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  40912353 ttagtcccacccttaccttagtattgatgatcggttgtctctctctctcttggttc 40912408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 19358879 - 19358944
Alignment:
Q  132 tgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||||||||| | |||||||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  19358879 tgttaaattcaattttcagaatcatatactcagaattattaaaggttagtcccacccttaccttag 19358944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 18786187 - 18786111
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| |||||||||||||||||| | | | |||||||||| | |||||||||| ||| ||||    
T  18786187 tatctaaggtctgtaaacagtttctacatcaatctaaccattctacatcaattaatcctcaatttctctcttaaacc 18786111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 23705658 - 23705582
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| ||||||||| || |||||||||||||||| |||||   |||||||||| ||| ||||    
T  23705658 tatctaaggtctgtaaacagtttctacataaaactaacaacttttcatccattaattctcaatttctctcttaaacc 23705582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 23137850 - 23137917
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctc 85  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||   ||||||||||    
T  23137850 tatctaaggtctataaacaaattctacatcaatctaactacttttcatccattaattctcaatttctc 23137917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 23549640 - 23549707
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctc 85  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||   ||||||||||    
T  23549640 tatctaaggtctataaacaaattctacatcaatctaactacttttcatccattaattctcaatttctc 23549707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 22106206 - 22106342
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  22106206 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 22106303  T
Q  192 cttagtattgatgatcggcggtctctctccctcttggtt 230  Q
    ||||| ||  |||||||||||  |||||  |||||||||    
T  22106304 cttagaatgaatgatcggcggcttctctatctcttggtt 22106342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 29602200 - 29602262
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||||||||||||||||||  ||||||||| |||||| || ||||| |||||    
T  29602200 ttttctccaaaaagcagtttcacgtaaaaaagtttctaaacctagttttcttcttatttctct 29602262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 18240824 - 18240865
Alignment:
Q  190 accttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  18240824 accttagtattgatgatcgacggtctctctccctcttggttc 18240865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 7680038 - 7680102
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaattt 82  Q
    ||||||||||||||||||| |||||||||||||||||| | | | |||||||||| | |||||||    
T  7680038 tatctaaggtctgtaaacagtttctacatcaatctaaccattctacatcaattaatcctcaattt 7680102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 18388240 - 18388189
Alignment:
Q  145 ttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |||||||||| |||||||| |||||||||| |||||| ||||||||||||||    
T  18388240 ttcagaatcatatactcaggattattgaaggttagtctcacccttaccttag 18388189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 37506 - 37424
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt-tctcactttaacctaatt 99  Q
    ||||||||||||   |||| ||||||||||||||||||||||| |||||  |||| |||||||| | ||| ||||||||||||    
T  37506 tatctaaggtctaggaacagtttctacatcaatctaacaacttctcatcgtttaatcatcaattatatcaatttaacctaatt 37424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 23286592 - 23286638
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||    
T  23286592 tatctaaggtctaggaacaatttctacatcaatctaacaacttttca 23286638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 21318030 - 21317971
Alignment:
Q  35 caatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||||||| |||||| |  |||| |||||||||||| | ||||||    
T  21318030 caatttctacatcaatctaacaaattttcaccgtttaatcatcaatttctctccttaacc 21317971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 23067979 - 23067916
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||| ||||||||||||||||||||||||||| |  |||| ||||||||    
T  23067979 tatctaaggtctaggaacagtttctacatcaatctaacaacttttcaccgtttaatcatcaatt 23067916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 23932201 - 23932302
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  23932201 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 23932298  T
Q  192 ctta 195  Q
    ||||    
T  23932299 ctta 23932302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 28291681 - 28291618
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||| ||||||||||||||||||||||||||| |  |||| ||||||||    
T  28291681 tatctaaggtctaggaacagtttctacatcaatctaacaacttttcaccgtttaatcatcaatt 28291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 32214351 - 32214250
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  32214351 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 32214254  T
Q  192 ctta 195  Q
    ||||    
T  32214253 ctta 32214250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 6726788 - 6726888
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  6726788 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 6726885  T
Q  192 ctt 194  Q
    |||    
T  6726886 ctt 6726888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 23077196 - 23077226
Alignment:
Q  34 acaatttctacatcaatctaacaacttttca 64  Q
    |||||||||||||||||||||||||||||||    
T  23077196 acaatttctacatcaatctaacaacttttca 23077226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 24368567 - 24368668
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || |||| ||  ||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  24368567 cctaattctcaaattctcaaaaaactatacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 24368665  T
Q  192 ctt 194  Q
    |||    
T  24368666 ctt 24368668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 6477145 - 6477104
Alignment:
Q  266 acgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  6477145 acgtgaaaacttttctaaacctagtttcctctttatatctct 6477104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 7055 - 6987
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctca 86  Q
    ||||||||||||||||| | ||||||| |||||||||| | | | |||||||||| | |||| ||||||    
T  7055 tatctaaggtctgtaaatagtttctacttcaatctaaccattctacatcaattaatcctcaaattctca 6987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 20309851 - 20309899
Alignment:
Q  33 aacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    |||| ||||||||||||||||||||||||||| |  |||| ||||||||    
T  20309851 aacagtttctacatcaatctaacaacttttcaccgtttaatcatcaatt 20309899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 43138183 - 43138215
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaatt 70  Q
    |||||||||||||||||||| ||||||||||||    
T  43138183 tttctacatcaatctaacaatttttcatcaatt 43138215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 108 - 307
Target Start/End: Complemental strand, 22237137 - 22236931
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22237137 ttctgaaacctcaacctacaaccatgttaaattcatcttcaaaatcacatactcagaattattgaagattactcccacccttaccttagtattgatgatc 22237038  T
Q  208 ggcggtctctctccctcttggttcnnnnnnnnnctt-------gttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctcctta 300  Q
    |||||||||||||| |||||||||          ||        ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  22237037 ggcggtctctctccttcttggttctcttctcttgttttctccctttttctccaaaaagcagtttcacgtaaaaacttttataaacctagtttcctcctta 22236938  T
Q  301 tatctct 307  Q
    |||||||    
T  22236937 tatctct 22236931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 13661032 - 13660854
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa--cctaattctccaattttctaaaa 115  Q
    |||||||||||||||  || ||||||||||||  |||||  ||| |||||  ||| ||||||||  ||||||| |  |||||||||| ||||  ||||||    
T  13661032 tatctaaggtctgtactcagtttctacatcaaattaacagttttccatcatctaatcatcaattcatcactttgaaccctaattctcaaatt--ctaaaa 13660935  T
Q  116 cctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    | ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13660934 cttcaacctacaaccatgttaaattcaattttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 13660854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 13719675 - 13719497
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa--cctaattctccaattttctaaaa 115  Q
    |||||||||||||||  || ||||||||||||  |||||  ||| |||||  ||| ||||||||  ||||||| |  |||||||||| ||||  ||||||    
T  13719675 tatctaaggtctgtactcagtttctacatcaaattaacagttttccatcatctaatcatcaattcatcactttgaaccctaattctcaaatt--ctaaaa 13719578  T
Q  116 cctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    | ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13719577 cttcaacctacaaccatgttaaattcaattttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 13719497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 14102526 - 14102439
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaa 105  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  14102526 tatctaaggtctgtaaacagtttctacatcaatctaacaacttttcatcaattaatcatcaattcctcactttaacctaattctccaa 14102439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 19807481 - 19807394
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19807481 ttctaaaacttcaacctacatccatgttaaattcatcttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 19807394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 39834453 - 39834540
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaa 105  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  39834453 tatctaaggtctgtaaacagtttctacatcaatctaacaacttttcatcaattaatcatcaattcctcactttaacctaattctccaa 39834540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 37516482 - 37516659
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa--cctaattctccaattttctaaaa 115  Q
    ||||||||||||||| |||||||||||||||||  ||||| |||  ||||  ||| |||||||| |||||||| |  |||||||||| ||||  ||||||    
T  37516482 tatctaaggtctgtacacaatttctacatcaattcaacaattttctatcatctaatcatcaattcctcacttttaaccctaattctcaaatt--ctaaaa 37516579  T
Q  116 cctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
     |||||||||||| | | |||||||||  ||||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  37516580 actcaacctacaatcgttttaaattcaatttcagaatcacatactcaagattattgaaggttagtcccacccttacctta 37516659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 22365431 - 22365528
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaa 115  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||| |||| |||||||    
T  22365431 tatctaaggtctgtaaacagtttctacatcaatctaacaatttttcatcaattaatcaccaatttctcactttaacttaattctcaaattctctaaaa 22365528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 19154186 - 19154090
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    |||||||||| || ||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| || |||| || |||||    
T  19154186 tctaaggtctatacacagtttctacatcaatctaacaatttttcatcaattaatcatcaatttctcactttaacctaattttcaaattctcaaaaac 19154090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 307
Target Start/End: Complemental strand, 41680157 - 41680011
Alignment:
Q  171 gaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttg----------ttttctccaaaaagca 260  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||         ||||          ||||||||||||||||    
T  41680157 gaaggttagtcccacctttaccttagtattgatgatcggcggtctctctccctcttggttctcctcttatcttgttttctccctttttctccaaaaagca 41680058  T
Q  261 gtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
     |||||||| ||||||||||||||| |||||||||||||||| ||||    
T  41680057 atttcacgtgaaaacttttctaaacctagtttcctccttatacctct 41680011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 24353861 - 24353939
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| |||| ||||||||    
T  24353861 tttctacatcaatctaacaatttttcatcaattaatcatcaatttctcaccttaacctaattctcaaattctctaaaac 24353939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 17438820 - 17438751
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaatt 107  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  17438820 tttctacatcaatctaacaatttttcatcaattaatcatcaatttctcactttaacctaattctcaaatt 17438751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 19880855 - 19880910
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19880855 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 19880910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 23479115 - 23479170
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23479115 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 23479170  T

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Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 176 - 307
Target Start/End: Original strand, 12577912 - 12578052
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttgtttt---------ctccaaaaagcagtttca 266  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||| |||         ||||||||         ||||||| ||||||||||    
T  12577912 ttagtcccacccttaccttagtattgatgatcagcagtctctctccctcttgattctcttcttctcttgttttctcctttttctccaaagagcagtttca 12578011  T
Q  267 cgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||||||||||||  ||||| ||||||||||||||    
T  12578012 cgtaaaaacttttctaaacccagttttctccttatatctct 12578052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 13507409 - 13507320
Alignment:
Q  17 atatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    |||||||||| ||||||||| |||||||||||||||||||  | | |||||||||| | ||||||||||||||||| |||||||||||||    
T  13507409 atatctaaggcctgtaaacagtttctacatcaatctaacagttctgcatcaattaatcctcaatttctcactttaaccctaattctccaa 13507320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 13596941 - 13596852
Alignment:
Q  17 atatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    |||||||||| ||||||||| |||||||||||||||||||  | | |||||||||| | ||||||||||||||||| |||||||||||||    
T  13596941 atatctaaggcctgtaaacagtttctacatcaatctaacagttctgcatcaattaatcctcaatttctcactttaaccctaattctccaa 13596852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 7465081 - 7465005
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||   |||||||||| | ||||||    
T  7465081 tatctaaggtctgtaaacaaattctacatcaatctaacaacttttcatccattaattctcaatttctctcattaacc 7465005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 17158982 - 17158927
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  17158982 ttagtcccacccttaccttagtattgatgatcggtggtctctctcccccttggttc 17158927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 26454741 - 26454796
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  26454741 ttagtcccacccttaccttagtattgatgatcggcgatctttctccctcttggttc 26454796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 23661407 - 23661469
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||| || |||||||||||    
T  23661407 ttttctccaaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctct 23661469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 20499380 - 20499468
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    ||||||||||||||||||| |||||||||||||||||| | | | |||||||||| | |||| ||||||| |||| |||||||||||||    
T  20499380 tatctaaggtctgtaaacagtttctacatcaatctaaccattctacatcaattaaccctcaaattctcaccttaaccctaattctccaa 20499468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 21286963 - 21287039
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||| |||| |||| | ||||||||||||||||||||||||||||| ||||| | |||||||||| ||||||||    
T  21286963 tatctaaagtctataaatagtttctacatcaatctaacaacttttcatccattaatcctcaatttctctctttaacc 21287039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 307
Target Start/End: Original strand, 3273866 - 3274059
Alignment:
Q  119 caacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctct 217  Q
    ||||| |||||| ||||||||||| | |||||||||| |||| || ||||||| ||| ||||||||||||||||||||| || |||||||||| |  |||    
T  3273866 caacccacaacc-tgttaaattcaattttcagaatcatatacacataattattaaaggttagtcccacccttaccttagaatggatgatcggcagcttct 3273964  T
Q  218 ctccctcttggttcnnnnnnnnnctt-----gttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||| || |||||||          ||      ||||||||||||||||| ||||| | ||||||||||||||| |||||| || |||||||||||    
T  3273965 ctctctattggttcttctcttgttttctccatttttctccaaaaagcaggttcacatgaaaacttttctaaacctagttttcttcttatatctct 3274059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 16198869 - 16198924
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||||||||||||    
T  16198869 ttagtcccacttttaccttagtattgatgatcggtggtctctctccctcttggttc 16198924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 982756 - 982668
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    |||||||||||||||||||||||||||||||||||||| | | | | | |||||| | |||||| ||||| |||| |||||||||||||    
T  982756 tatctaaggtctgtaaacaatttctacatcaatctaaccattctacgttaattaatcctcaattcctcaccttaaccctaattctccaa 982668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 17266319 - 17266243
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| |||||||||||||   |||| | | ||||||| || |||||||||||||||||||||    
T  17266319 tatctaaggtctgtaaacactttctacatcaattctacaattctacatcaataaatcatcaatttctcactttaacc 17266243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 19800790 - 19800707
Alignment:
Q  34 acaatttctacatcaatctaacaacttttcatcaattaaacatcaattt-ctcactttaa-cctaattctccaattttctaaaa 115  Q
    ||||||| ||||||||||||||||||||||| | ||||| ||||||||| ||| |||||| |||||||||| |||| |||||||    
T  19800790 acaatttttacatcaatctaacaacttttcaccgattaatcatcaatttcctctctttaaccctaattctcaaattctctaaaa 19800707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 20463197 - 20463247
Alignment:
Q  145 ttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||||||||    
T  20463197 ttcagaatcatatactcagaattattgaaggttagtctcacccttacctta 20463247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 42265585 - 42265510
Alignment:
Q  119 caacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctt 194  Q
    |||||||||||  ||||||||||| | |||||||||| ||||||||| ||||| ||| |||||||||||||||||||    
T  42265585 caacctacaact-tgttaaattcaattttcagaatcatatactcagacttattaaaggttagtcccacccttacctt 42265510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 6521110 - 6521173
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||||||||| |||||||||||||||||| | | | |||||||||| | ||||||    
T  6521110 tatctaaggtctgtaaacagtttctacatcaatctaaccattctacatcaattaatcctcaatt 6521173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 19928935 - 19928852
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcac-tttaacctaattc 100  Q
    ||||||||||||||| ||| |||||||||||||  ||||| |||||||||  ||| ||||||| | |||| |||||||||||||    
T  19928935 tatctaaggtctgtacacagtttctacatcaattcaacaagttttcatcatctaatcatcaatctatcacttttaacctaattc 19928852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 21918390 - 21918327
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||  | |||||||||||||||||||||||| |||||| | ||||| ||||||||    
T  21918390 tatctaaggtctagagacaatttctacatcaatctaacaagttttcaccgattaatcatcaatt 21918327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 22317987 - 22317910
Alignment:
Q  119 caacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||||| |||| ||||||||||| | |||||||||| | ||| ||||||| ||||| |||||||||||||||||||||    
T  22317987 caacctagaacc-tgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttaccttag 22317910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 5610020 - 5609939
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaatt 99  Q
    |||||||||||||||| || ||||||||||||| |||| | | ||||||||||   || |||||  ||||||||||||||||    
T  5610020 tatctaaggtctgtaaccactttctacatcaatttaaccattattcatcaatttctcaccaattcttcactttaacctaatt 5609939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 24049351 - 24049453
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaat-tcatcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| | || |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  24049351 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatataattttcagaatcatagactcaagattattgaatgttagtcccacccttac 24049448  T
Q  192 cttag 196  Q
    |||||    
T  24049449 cttag 24049453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 32810435 - 32810537
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  32810435 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 32810532  T
Q  192 cttag 196  Q
    |||||    
T  32810533 cttag 32810537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 1326546 - 1326445
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  1326546 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 1326449  T
Q  192 ctta 195  Q
    ||||    
T  1326448 ctta 1326445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 5865656 - 5865593
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||| ||||||||||||||||||||||||||| |  |||| ||||||||    
T  5865656 tatctaaggtctaggaacagtttctacatcaatctaacaacttttcaccgtttaatcatcaatt 5865593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 16412736 - 16412635
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  16412736 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 16412639  T
Q  192 ctta 195  Q
    ||||    
T  16412638 ctta 16412635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 16800235 - 16800318
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcac-tttaacctaattc 100  Q
    ||||||||||||||||||| |||||||||||||   |||| |||||||||  ||| | ||||||  |||| |||||||||||||    
T  16800235 tatctaaggtctgtaaacactttctacatcaattctacaagttttcatcatctaatcctcaattgatcacttttaacctaattc 16800318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 17141655 - 17141718
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||| |  |||| ||||||||||||||||||||||||||| |  |||| ||||||||    
T  17141655 tatctaaggtcagggaacagtttctacatcaatctaacaacttttcaccgtttaatcatcaatt 17141718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 31971985 - 31972048
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||| |||||||| |||||||||||||||||| || |||| ||||||||    
T  31971985 tatctaaggtctaggaacagtttctacaccaatctaacaacttttcaccatttaatcatcaatt 31972048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 40492204 - 40492106
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcact-ttaa-cctaattctccaattttctaaaa 115  Q
    ||||||||||||||||||| |||||||||||||   |||| |||||| ||  ||| |||||| |||||||| |||| |||||||||| |||| |||||||    
T  40492204 tatctaaggtctgtaaacactttctacatcaattctacaagttttcaccatctaatcatcaa-ttctcactcttaaccctaattctcaaattctctaaaa 40492106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 19897256 - 19897356
Alignment:
Q  94 ctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacc 192  Q
    ||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  |||||||||||||||||    
T  19897256 ctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacc 19897353  T
Q  193 tta 195  Q
    |||    
T  19897354 tta 19897356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 20457994 - 20458044
Alignment:
Q  145 ttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||| ||||| ||||||| ||||||||||| |||||| |||||||||||||    
T  20457994 ttcaaaatcatatactcaaaattattgaaggttagtctcacccttacctta 20458044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 21388831 - 21388785
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   |||||||||||||||||| |||||||||||||    
T  21388831 tatctaaggtctaagaacaatttctacatcaatttaacaacttttca 21388785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 22627477 - 22627523
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   |||| |||||||||||||||||||||||||||    
T  22627477 tatctaaggtctaggaacagtttctacatcaatctaacaacttttca 22627523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 23407140 - 23407170
Alignment:
Q  34 acaatttctacatcaatctaacaacttttca 64  Q
    |||||||||||||||||||||||||||||||    
T  23407140 acaatttctacatcaatctaacaacttttca 23407170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 28648452 - 28648406
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   |||| |||||||||||||||||||||||||||    
T  28648452 tatctaaggtctaggaacagtttctacatcaatctaacaacttttca 28648406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 21250151 - 21250232
Alignment:
Q  19 atctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt-tctcactttaacctaatt 99  Q
    |||||||||||   |||| ||| ||||||||||||||||||||||| |  |||| |||||||| | ||| ||||||||||||    
T  21250151 atctaaggtctaggaacagtttttacatcaatctaacaacttttcaccttttaatcatcaattctatcaatttaacctaatt 21250232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 23661330 - 23661383
Alignment:
Q  178 agtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||| ||  |||||||||||  |||||| ||||||||||    
T  23661330 agtcccacccttaccttagaatgaatgatcggcggcttctctctctcttggttc 23661383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 5852582 - 5852507
Alignment:
Q  120 aacctacaaccatgttaaattc-atcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| ||||||||| | || |||||||||| | |||||  |||||||||  ||||||||||||||||||||    
T  5852582 aacctacaac-atgttaaatacgattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 5852507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 20457419 - 20457521
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | ||||| |||| | |||||  |||||||||  ||||||||||||||||    
T  20457419 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcaggatcatagactcaagattattgaatgttagtcccacccttac 20457516  T
Q  192 cttag 196  Q
    |||||    
T  20457517 cttag 20457521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 20532709 - 20532677
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaat 50  Q
    ||||||||||||||||||| |||||||||||||    
T  20532709 tatctaaggtctgtaaacactttctacatcaat 20532677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 20539056 - 20539104
Alignment:
Q  34 acaatttctacatcaatctaacaacttttcatcaattaaacatcaattt 82  Q
    |||||||||||||||||||||||| |||||| |  |||| |||||||||    
T  20539056 acaatttctacatcaatctaacaatttttcaccgtttaatcatcaattt 20539104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 26220477 - 26220509
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaatt 70  Q
    |||||||||||||||||||| ||||||||||||    
T  26220477 tttctacatcaatctaacaatttttcatcaatt 26220509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 26222476 - 26222444
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaatt 70  Q
    |||||||||||||||||||| ||||||||||||    
T  26222476 tttctacatcaatctaacaatttttcatcaatt 26222444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 27471838 - 27471736
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||| ||||| | |||||  |||||||||  ||||||||||||||||    
T  27471838 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttac 27471741  T
Q  192 cttag 196  Q
    |||||    
T  27471740 cttag 27471736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 32122469 - 32122571
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||| ||||||||||    
T  32122469 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagttccacccttac 32122566  T
Q  192 cttag 196  Q
    |||||    
T  32122567 cttag 32122571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 38854630 - 38854594
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaa 54  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  38854630 tatctaaggtctgtaaacagtttctgcatcaatctaa 38854594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 5e-62; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 108 - 307
Target Start/End: Original strand, 10057626 - 10057840
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10057626 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaaggttagtcccacccttaccttagtattgatgatc 10057725  T
Q  208 ggcggtctct----ctccctcttggttcnnnnnnnnncttgt-----------tttctccaaaaagcagtttcacgtaaaaacttttctaaacttagttt 292  Q
    ||||||||||    |||||||||||||          |||||           |||||||||||||||||||||||||||||||||||||||| ||||||    
T  10057726 ggcggtctctctccctccctcttggttatcctcttctcttgttttctcccctttttctccaaaaagcagtttcacgtaaaaacttttctaaacctagttt 10057825  T
Q  293 cctccttatatctct 307  Q
    |||||||||||||||    
T  10057826 cctccttatatctct 10057840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 27996666 - 27996844
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa--cctaattctccaattttctaaaa 115  Q
    ||||||||||||||| ||||||||||||| ||| |||||  ||| |||||  ||| ||||||||  ||||||| |  |||||||| | ||||  ||||||    
T  27996666 tatctaaggtctgtacacaatttctacattaatttaacagttttccatcatctaatcatcaattcatcacttttaaccctaattcccaaatt--ctaaaa 27996763  T
Q  116 cctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27996764 ctacaatctacaaccatgttaaattcattttcagaatcacatactcagaattattgaaggttagtcccacccttaccttag 27996844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 196
Target Start/End: Original strand, 19739616 - 19739791
Alignment:
Q  21 ctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa--cctaattctccaattttctaaaacct 118  Q
    |||||||||||| ||| |||||||||||||  ||||| ||| || ||  ||| ||||||||  ||||||| |  |||||||| | ||||  |||||||      
T  19739616 ctaaggtctgtacacagtttctacatcaattcaacaattttccaacatctaatcatcaattcatcacttttaaccctaattcccaaatt--ctaaaacta 19739713  T
Q  119 caacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  19739714 caacctacaaccgtgttaaattcatattcataatcacatactcagaattattgaaggttagtctcacccttaccttag 19739791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 305
Target Start/End: Original strand, 14186842 - 14187110
Alignment:
Q  26 gtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc-taattctccaattttctaaaacctcaa-cc 123  Q
    ||||||| ||| |||||||||||||||||| | ||| || | ||||| || |||| ||||||||||||| || || || |||| |||||||  |||| ||    
T  14186842 gtctgtacacagtttctacatcaatctaaccattttccaccgattaatcaacaatctctcactttaaccctagttttcaaattctctaaaa--tcaatcc 14186939  T
Q  124 tacaaccatgttaaatt-catcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccc 222  Q
    |||| ||| |||||||| ||  |||||||||| | ||| |||||||  |||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  14186940 taca-cca-gttaaatttcaatttcagaatcatacacttagaattagagaaagttactcccacccttaccttagtattgatgatcggcggtctctctccc 14187037  T
Q  223 tcttggttcnnnnnnnnncttgttttc-tccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatct 305  Q
    || |||||          ||| | ||| ||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||    
T  14187038 tcgtggtt----------cttctcttcttccaaaaagcagtttcacgtaaaaactcttct-aacctagtttcctccttatatct 14187110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 32852194 - 32852294
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaac-ctaattctccaattttctaaaac 116  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |   |||||||||||||||| ||||||||| |||| ||||||||    
T  32852194 tatctaaggtctgtaaacagtttctacatcaatctaacaatttttcatcaattaatcccaaatttctcactttaactctaattctcaaattctctaaaac 32852293  T
Q  117 c 117  Q
    |    
T  32852294 c 32852294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 26014251 - 26014350
Alignment:
Q  110 ctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcgg 209  Q
    |||||| ||||||||||||||||||||||||||  |||| |||||||||||||  |||||||||| |||||||||||||||||||||  | |||||||||    
T  26014251 ctaaaaactcaacctacaaccatgttaaattcaatttcaaaatcacatactcaagattattgaaggttagtcccacccttaccttagattagatgatcgg 26014350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 52242595 - 52242519
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||| ||||||||    
T  52242595 tatctaaggtctgtaaacagtttctacatcaatctaacaacttttcatccattaatcctcaatttctctctttaacc 52242519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 15008996 - 15009051
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15008996 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 15009051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 13591190 - 13591069
Alignment:
Q  74 catcaatttctcactttaa--cctaattctccaattttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattg 171  Q
    |||||||| |||||||| |  |||||||||| ||||  ||||||||||||| |||||||||||||||||||   ||||| |||||||||||  ||||||     
T  13591190 catcaattcctcacttttaaccctaattctcaaatt--ctaaaacctcaacatacaaccatgttaaattcaatatcagattcacatactcaagattattt 13591093  T
Q  172 aagattagtcccacccttacctta 195  Q
    ||| ||||||||||||||||||||    
T  13591092 aaggttagtcccacccttacctta 13591069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 46643614 - 46643702
Alignment:
Q  21 ctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattt 108  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||||| | |||||||||| ||| || ||||||||||||||||    
T  46643614 ctaaggtctgtaaacagtttctacatcaatctaacaactctacatcaattaatcctcaatttctctcttaaaccctaattctccaattt 46643702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 15868046 - 15867948
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaa 115  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||||||||||| |   |||| |||||||||| |||||||||| |||| |||||||    
T  15868046 tatctaaggtctgtaaaccgtttctacatcaatctaacaatttttcatcaattaatctcaaattcctcactttaaccctaattctcaaattctctaaaa 15867948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 53081478 - 53081402
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||| |||| ||| |||||||||||||||||||| | | |||||||||| |||||||||||||||||||||    
T  53081478 tatctaaggtatgtacacagtttctacatcaatctaacaattctacatcaattaatcatcaatttctcactttaacc 53081402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 40620569 - 40620620
Alignment:
Q  180 tcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40620569 tcccacccttaccttagtattgatgatcggcggtctctctccctcttagttc 40620620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 43198017 - 43197950
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctc 85  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| | ||||||||||    
T  43198017 tatctaagatctgtaaacaaattctacatcaatctaacaacttttcatccattaatcctcaatttctc 43197950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 12841440 - 12841530
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcac-tttaacctaattctccaatt 107  Q
    ||||||| ||||||||||| ||||||||||||| |||||  |||||||||  ||| |||||||| ||||| ||||||||||||||||||||    
T  12841440 tatctaatgtctgtaaacactttctacatcaatttaacactttttcatcatctaatcatcaattcctcacttttaacctaattctccaatt 12841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 19243711 - 19243773
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||||||||||||||||||  ||||||||| |||||| || |||||||||||    
T  19243711 ttttctccaaaaagcagtttcacgtaaaaaagtttctaaacctagttttcttcttatatctct 19243773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 11200 - 11112
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    ||||||||||||||||||| ||||||||||||||||||   | | |||||||||| | |||||||||| ||| || |||||||||||||    
T  11200 tatctaaggtctgtaaacagtttctacatcaatctaaccgttctacatcaattaatcctcaatttctctcttaaaccctaattctccaa 11112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 26014404 - 26014466
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||| |   ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  26014404 ttttctccaaacacatgtttcacttaaaaacttttctaaacctagtttcctccttatatctct 26014466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 12287534 - 12287443
Alignment:
Q  18 tatctaaggtctgtaaacaatttcta---catcaatctaacaacttttcatcaattaaacatcaatttctcactttaac-ctaattctccaa 105  Q
    ||||||||||||||||||| ||||||   |||||||||||||  | | |||||||||| | |||||||||| ||||||| ||||||||||||    
T  12287534 tatctaaggtctgtaaacagtttctaaaacatcaatctaacagttctacatcaattaatcctcaatttctctctttaactctaattctccaa 12287443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 15100070 - 15100134
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaattt 82  Q
    ||||||||||||||||||| |||||||||||||||||| | | | |||||||||| | |||||||    
T  15100070 tatctaaggtctgtaaacagtttctacatcaatctaaccattctacatcaattaatcctcaattt 15100134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 15464308 - 15464232
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||||||||| || |||||||||||||||||||  | | |||||||||| | |||||||||  ||||||||    
T  15464308 tatctaaggtctgtaagcagtttctacatcaatctaacagttctacatcaattaatcctcaatttctatctttaacc 15464232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 12903487 - 12903550
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||||||||||||||||||||||||||||||| |  |||| ||||||||    
T  12903487 tatctaaggtctaagaacaatttctacatcaatctaacaacttttcaccgtttaatcatcaatt 12903550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 16043833 - 16043896
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||||| ||| |||||||||||||  ||||  |||||||||||||| ||||||||    
T  16043833 tatctaaggtctgtacacattttctacatcaattcaacagtttttcatcaattaatcatcaatt 16043896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 50160960 - 50161085
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaactt-ttcatcaattaaacatcaatttctcactttaa--cctaattctccaattttctaaa 114  Q
    ||||||||||||||| | | |||||||||||||  ||||| || ||| |||  ||| |||||| | |||||||| |  |||||||||| ||||  |||||    
T  50160960 tatctaaggtctgtacatagtttctacatcaattcaacaatttattcctcatctaatcatcaaatcctcacttttaaccctaattctcaaatt--ctaaa 50161057  T
Q  115 acctcaacctacaaccatgttaaattca 142  Q
    | |||||||||||||||||| |||||||    
T  50161058 aactcaacctacaaccatgtaaaattca 50161085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 363114 - 363216
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  363114 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 363211  T
Q  192 cttag 196  Q
    |||||    
T  363212 cttag 363216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 3332560 - 3332623
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||||||||||||||| |||||||| |||||| | ||||| ||||||||    
T  3332560 tatctaaggtctaggaacaatttctacatcattctaacaagttttcaccgattaatcatcaatt 3332623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 7089608 - 7089671
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   || ||||||||||||||||||||||||||||| |  |||| ||||||||    
T  7089608 tatctaaggtctaggaataatttctacatcaatctaacaacttttcaccgtttaatcatcaatt 7089671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 13812308 - 13812245
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||||||||||||||| |||||||| |||||| | ||||| ||||||||    
T  13812308 tatctaaggtctaggaacaatttctacatcattctaacaagttttcaccgattaatcatcaatt 13812245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 14165333 - 14165372
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaa 57  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  14165333 tatctaaggtctgtcaacagtttctacatcaatctaacaa 14165372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 15552556 - 15552619
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||| ||||||||||||||||||||||||||| |  |||| ||||||||    
T  15552556 tatctaaggtctaggaacagtttctacatcaatctaacaacttttcaccgtttaatcatcaatt 15552619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 231
Target Start/End: Original strand, 19243549 - 19243687
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || |||||   |||||||||| ||||||||| || | ||||||||||   ||| |  |||||||||  ||||||||||||||||    
T  19243549 cctaattctcaaattctcaaaaactaaaacctacaac-atgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttac 19243647  T
Q  192 cttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||| ||  |||||||||||  | |||| ||||||||||    
T  19243648 cttagaatgaatgatcggcggcttttctctctcttggttc 19243687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 24029483 - 24029546
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   || ||||||||||||| |||||||| |||||||| ||||| ||||||||    
T  24029483 tatctaaggtctaggaataatttctacatcattctaacaagttttcatcgattaatcatcaatt 24029546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 14052743 - 14052661
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt-tctcactttaacctaatt 99  Q
    ||||||||||||   |||| ||||||| ||||||||||||||||||| |  |||| |||||||| ||||| ||| ||||||||    
T  14052743 tatctaaggtctaggaacagtttctacgtcaatctaacaacttttcaccgtttaatcatcaattctctcaatttgacctaatt 14052661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 12729754 - 12729713
Alignment:
Q  266 acgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  12729754 acgtgaaaacttttctaaacctagtttcctctttatatctct 12729713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 39705667 - 39705588
Alignment:
Q  18 tatctaaggtctgtaaa---caatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||||||| ||   ||| ||||||||||||||||||| |||||||| |||||   |||||||||| | ||||||    
T  39705667 tatctaaggtctgtgaatatcaaattctacatcaatctaacaatttttcatccattaattctcaatttctctcattaacc 39705588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 3515748 - 3515850
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  |||||| |||||||||    
T  3515748 cctaattctcaaattatcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttac 3515845  T
Q  192 cttag 196  Q
    |||||    
T  3515846 cttag 3515850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 14825889 - 14825921
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaat 50  Q
    ||||||||||||||||||| |||||||||||||    
T  14825889 tatctaaggtctgtaaacactttctacatcaat 14825921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 19617470 - 19617395
Alignment:
Q  120 aacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||||||    
T  19617470 aacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 19617395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 54798031 - 54797999
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaatt 70  Q
    |||||||||||||||||||| ||||||||||||    
T  54798031 tttctacatcaatctaacaatttttcatcaatt 54797999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 8e-61; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 108 - 307
Target Start/End: Complemental strand, 52988945 - 52988732
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  52988945 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaaggttagtctcacccttaccttagtattgatgatc 52988846  T
Q  208 ggcggtctctctccctcttggttcnnnnnnnnncttg----------ttttctccaaaaagcagtttcacgt----aaaaacttttctaaacttagtttc 293  Q
     |||||||||||||||||||||||         ||||          |||||||||||||||||||||||||    |||||||||||||||| |||||||    
T  52988845 tgcggtctctctccctcttggttctcttcttttcttgttttctccctttttctccaaaaagcagtttcacgtaaaaaaaaacttttctaaacctagtttc 52988746  T
Q  294 ctccttatatctct 307  Q
    ||||||||||||||    
T  52988745 ctccttatatctct 52988732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 108 - 307
Target Start/End: Original strand, 14967149 - 14967341
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  14967149 ttctaaaacctcaacctacaaccatgttaaattcatcctcagaatcacattctcagaattattgaaggttagtcccccccttaccttagtattgatgatc 14967248  T
Q  208 ggcggtctctctccctcttggttcnnnnnnnnncttgttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||||||||||||| ||          |   ||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  14967249 ggcggtctctctccctcttgttt-------tctccatttttctctaaaaagcagtttcacgtaaaagcttttctaaacctagttttctccttatatctct 14967341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 176 - 307
Target Start/End: Complemental strand, 15446887 - 15446755
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttgttttctccaaaaagcagtttcacgtaaaa-a 274  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||         ||||||||||||||||||||||||||||||||| |    
T  15446887 ttagtcccacccttaccttagtaatgatgatcggcgatctctctccctcttggttctccttttctcttgttttctccaaaaagcagtttcacgtaaaaga 15446788  T
Q  275 cttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||| |||||||||||||||||||||    
T  15446787 cttttctaaacctagtttcctccttatatctct 15446755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 324955 - 325044
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaatt 107  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  324955 tatctaaggtctgtaaatagtttctacatcaatctaacaacttttcatcaattaatcatcaattcttcactttaacctaattctccaatt 325044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 219
Target Start/End: Original strand, 46752073 - 46752182
Alignment:
Q  110 ctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcgg 209  Q
    ||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | ||||||    
T  46752073 ctaaaactttaacctacaaccatgttaaattcaatttcagaatcacatactcagaattattgaaggttagtcccacccttaccttaggattaacgatcgg 46752172  T
Q  210 cggtctctct 219  Q
    | | ||||||    
T  46752173 cagcctctct 46752182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 14501942 - 14502042
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaac 116  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |   ||||||||||||||| |||||||||| |||| ||||||||    
T  14501942 tatctaaggtctgtaaacaatttctacatcaatctaacaatttttcatcaattaatcccaaatttctcactttaaccctaattctcaaattctctaaaac 14502041  T
Q  117 c 117  Q
    |    
T  14502042 c 14502042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 6804979 - 6804892
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    ||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  6804979 ttctaaaactttaacctacaaccatgttaaattcaatttcagaatcacatactcagaattattgaaggttagtctcacccttacctta 6804892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 37250493 - 37250417
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  37250493 tatctaaggtctgtaaatagtttctacatcaatctaacaacttttcatcaattaatcctcaatttctcactttaacc 37250417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 157 - 307
Target Start/End: Complemental strand, 3264001 - 3263842
Alignment:
Q  157 tactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttg----------tt 246  Q
    |||| |||||||  |||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||         ||||          ||    
T  3264001 tacttagaattagagaaggttaatccgacccttaccttagtattgatgatcggcggtctctctccctcttggttcttcttttctcttgttttctcaattt 3263902  T
Q  247 ttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||    
T  3263901 ttctccaaaaagcagtttcacgtaaaaactcttct-aacctagtttcctccttatatctct 3263842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 37641523 - 37641468
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37641523 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 37641468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 21838250 - 21838347
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaa 115  Q
    ||||||||||||||| ||| |||||| ||||||||||||| | | |||||||||| | |||||| ||||||||||||||||||||||| | |||||||    
T  21838250 tatctaaggtctgtacacagtttctaaatcaatctaacaattctacatcaattaatcgtcaattcctcactttaacctaattctccaactctctaaaa 21838347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 31223921 - 31223816
Alignment:
Q  119 caacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctc 218  Q
    |||||||||||| |||||||| ||  |||||||| ||||||||||||||| ||||| |      ||||||||||||||||||||||||||| ||||||||    
T  31223921 caacctacaacc-tgttaaatccagtttcagaattacatactcagaattactgaaggt------cacccttaccttagtattgatgatcggtggtctctc 31223829  T
Q  219 tccctcttggttc 231  Q
    |||||||||||||    
T  31223828 tccctcttggttc 31223816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 2045029 - 2044957
Alignment:
Q  22 taaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||| ||||||||    
T  2045029 taaggtctgtaaacagtttctacatcaatctaacaacttttcatccattaatcctcaatttctctctttaacc 2044957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 2047758 - 2047686
Alignment:
Q  22 taaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||| ||||||||    
T  2047758 taaggtctgtaaacagtttctacatcaatctaacaacttttcatccattaatcctcaatttctctctttaacc 2047686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 307
Target Start/End: Complemental strand, 24177752 - 24177612
Alignment:
Q  179 gtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttgttttctcc------------aaaaagcagtttca 266  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||         ||||||||||||            ||| ||||||||||    
T  24177752 gtcccacccttaccttagtattgataatcggcggtctctctccctcttggttctcctcttctcttgttttctccctttttctccaaaaagagcagtttca 24177653  T
Q  267 cgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    | ||||||||||||||||| ||||||| |||||||||||||    
T  24177652 cttaaaaacttttctaaacctagtttcttccttatatctct 24177612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 36528904 - 36528955
Alignment:
Q  180 tcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36528904 tcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 36528955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 45797965 - 45798050
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctc 102  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||||||| |   ||||||||||||||| ||||||||||    
T  45797965 tatctaaggtctgtaaacagtttctacatcaatctaataatttttcatcaattaatcccaaatttctcactttaaccctaattctc 45798050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 23412551 - 23412476
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |   |||||||||||||||||    
T  23412551 tatctaaggtctgtaaacagtttctacatcaatctaacaa-ttttcatcaattaatctcaaatttctcactttaacc 23412476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 52523106 - 52523030
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||| |||||   |||||||||| ||||||||    
T  52523106 tatctacggtctgtaaacagtttctacatcaatctaacaacttttcatccattaattctcaatttctctctttaacc 52523030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 16979945 - 16980000
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  16979945 ttagtcccacccttaccttagtattgatgatcgacggtctctctctctcttggttc 16980000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 312
Target Start/End: Complemental strand, 52465390 - 52465256
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttgttttctccaaaaa-gcagtttcacgtaaaaa 274  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||   ||          |||  |||||||||||| |||||||||| ||||||    
T  52465390 ttagtcacacccttaccttagtattgatgatcggcggtctctctcc-tctccttttgttttctccctt--tttctccaaaaaagcagtttcacctaaaaa 52465294  T
Q  275 cttttctaaacttagtttcctccttatatctctgctcc 312  Q
    |||||| |||| ||||||||||||||||||||| ||||    
T  52465293 cttttccaaacctagtttcctccttatatctctcctcc 52465256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 11202097 - 11202187
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcac-tttaacctaattctccaatt 107  Q
    ||||||||||||||| ||| |||||||||||||||||||  |||||||||  ||| |||||||| ||||| |||||||||||||| |||||    
T  11202097 tatctaaggtctgtacacattttctacatcaatctaacactttttcatcatctaatcatcaattcctcacttttaacctaattcttcaatt 11202187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 37428492 - 37428669
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt-tctcactttaacctaattctccaattttctaaaacct 118  Q
    ||||||||||||| ||| |||||||||||||||||||  ||| |||||  ||| | |||||| || | ||| | |||||||||| |||| || |||| ||    
T  37428492 tctaaggtctgtacacactttctacatcaatctaacagttttccatcatctaatcgtcaattatcactcttaaccctaattctcaaattctc-aaaaact 37428590  T
Q  119 caacctacaaccatgttaaattc-atcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagt 197  Q
     ||||||||| |||||| ||| | || ||||||||||   ||| || ||||||||| |||||||||||||||||||||||    
T  37428591 aaacctacaa-catgttgaatacaatattcagaatcaatgacttaggattattgaatattagtcccacccttaccttagt 37428669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 23275439 - 23275528
Alignment:
Q  17 atatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    |||||||||| ||| ||||| |||||||||||||||||||  | | |||||||||| | ||||||| ||||||||| |||||||||||||    
T  23275439 atatctaaggcctgcaaacagtttctacatcaatctaacagttctacatcaattaatcctcaatttatcactttaaccctaattctccaa 23275528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 14235239 - 14235315
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||| |||||||||| | |||||| ||| | ||||||    
T  14235239 tatctaaggtctgtaaacagtttctagatcaatctaacaattttacatcaattaatcctcaattcctctcattaacc 14235315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 42387131 - 42387195
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaattt 82  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||| || ||||||    
T  42387131 tatctaaggtctgtaaacagtttctacctcaatctaacaacttctcatcaagtaatcaccaattt 42387195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 44495650 - 44495712
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||| || ||||||||||||||||||||| ||||||||| |||||| || |||||||||||    
T  44495650 ttttcttcataaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctct 44495712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 12386213 - 12386303
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    ||||||||||||||||||| |||||||||||||        | |  ||||||||| ||||||||||||||||||||||||||||| |||| || |||||    
T  12386213 tatctaaggtctgtaaacactttctacatcaat--------tctatatcaattaatcatcaatttctcactttaacctaattctcaaattctcaaaaac 12386303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 1464810 - 1464746
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaattt 82  Q
    ||||||||||||||||||| |||||||||||||||||| | | | |||||||||| | |||||||    
T  1464810 tatctaaggtctgtaaacagtttctacatcaatctaaccattctacatcaattaaccctcaattt 1464746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 605672 - 605613
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatc 77  Q
    ||||||| ||||||||||| |||||||||||||||||||| |||||| | ||||| ||||    
T  605672 tatctaatgtctgtaaacagtttctacatcaatctaacaagttttcaccgattaatcatc 605613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 40213099 - 40213012
Alignment:
Q  19 atctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    |||||||||||   |||| |||||||||||||||||||||||||||||  |||| |||||| ||||  | |||| |||||||||||||    
T  40213099 atctaaggtctaggaacagtttctacatcaatctaacaacttttcatcgtttaatcatcaaattctatcattaaccctaattctccaa 40213012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 1864397 - 1864331
Alignment:
Q  165 attattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||  ||||||||||||||||||||| ||  |||||||||||  |||||| ||||||||||    
T  1864397 attattgaatgttagtcccacccttaccttagaatgaatgatcggcggcttctctctctcttggttc 1864331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 18439276 - 18439322
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||    
T  18439276 tatctaaggtctaggaacaatttctacatcaatctaacaacttttca 18439322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 22109656 - 22109571
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctc 102  Q
    |||||||||||| ||| || |||||||||||||||||||| | |  ||||||||| | |||||| ||| |||||| ||||||||||    
T  22109656 tatctaaggtctataagcagtttctacatcaatctaacaattctatatcaattaatcctcaattcctctctttaaccctaattctc 22109571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 22792037 - 22792118
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaatt 99  Q
    |||||||||||||||| || ||||||||||||| |||| | | ||||||||||   || |||||  ||||||||||||||||    
T  22792037 tatctaaggtctgtaaccactttctacatcaatttaaccattattcatcaatttctcaccaattcttcactttaacctaatt 22792118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 1864308 - 1864244
Alignment:
Q  244 gttttctccaaaaagcagtttcacgta-aaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||||| ||||||||| ||||  ||||||||| |||||| || |||||||||||    
T  1864308 gttttctccaaaaagcaatttcacgtaaaaaaagtttctaaacatagttttcttcttatatctct 1864244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 12119286 - 12119184
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  12119286 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 12119189  T
Q  192 cttag 196  Q
    |||||    
T  12119188 cttag 12119184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 46823002 - 46823103
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattc-atcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| | || |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  46823002 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacgattttcagaatcatagactcaagattattgaatgttagtcccacccttac 46823099  T
Q  192 ctta 195  Q
    ||||    
T  46823100 ctta 46823103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 13937395 - 13937295
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  13937395 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 13937298  T
Q  192 ctt 194  Q
    |||    
T  13937297 ctt 13937295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 14604738 - 14604776
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaaca 56  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  14604738 tatctaaggtctgtacacagtttctacatcaatctaaca 14604776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 38961259 - 38961158
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || |||| || |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  |||||| |||||||||    
T  38961259 cctaattctcaaattctcaaaaaactaaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttac 38961161  T
Q  192 ctt 194  Q
    |||    
T  38961160 ctt 38961158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 40957216 - 40957282
Alignment:
Q  130 catgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |||||||||||||  || ||||||| ||||||||||||||| ||| |||||| ||| ||||| ||||    
T  40957216 catgttaaattcaattttagaatcatatactcagaattattaaaggttagtctcactcttactttag 40957282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 41124680 - 41124780
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  41124680 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 41124777  T
Q  192 ctt 194  Q
    |||    
T  41124778 ctt 41124780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 43842936 - 43842966
Alignment:
Q  34 acaatttctacatcaatctaacaacttttca 64  Q
    |||||||||||||||||||||||||||||||    
T  43842936 acaatttctacatcaatctaacaacttttca 43842966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 44495569 - 44495626
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcgg--tctctctccctcttggttc 231  Q
    ||||||||||||||||||||| ||  |||||||||||  |||||||| ||||||||||    
T  44495569 ttagtcccacccttaccttagaatgaatgatcggcggcttctctctctctcttggttc 44495626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 17547380 - 17547339
Alignment:
Q  266 acgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  17547380 acgtgaaaacttttctaaacctagtttcctctttatatctct 17547339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 43927904 - 43927945
Alignment:
Q  29 tgtaaacaatttctacatcaatctaacaacttttcatcaatt 70  Q
    |||| ||| |||||||||||||||||||| ||||||||||||    
T  43927904 tgtacacagtttctacatcaatctaacaatttttcatcaatt 43927945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 13919647 - 13919679
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaat 50  Q
    ||||||||||||||||||| |||||||||||||    
T  13919647 tatctaaggtctgtaaacactttctacatcaat 13919679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 21619307 - 21619339
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaatt 70  Q
    |||||||||||||||||||| ||||||||||||    
T  21619307 tttctacatcaatctaacaatttttcatcaatt 21619339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 24514250 - 24514325
Alignment:
Q  120 aacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||||||    
T  24514250 aacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 24514325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 36167456 - 36167488
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaatt 70  Q
    |||||||||||||||||||| ||||||||||||    
T  36167456 tttctacatcaatctaacaatttttcatcaatt 36167488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 108 - 307
Target Start/End: Original strand, 13602 - 13811
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||| ||    
T  13602 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatacttagaattattgaaggttactcccacccttaccgtagtattgatggtc 13701  T
Q  208 ggcggtctctctccctcttggttcnnnnnnnnncttg----------ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctcc 297  Q
     ||||||||||||||| |||||||         ||||          ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13702 agcggtctctctccctgttggttctcctcttctcttgttttctccctttttctccaaaaagcagtttcacgtaaaaacttttctaaacctagtttcctcc 13801  T
Q  298 ttatatctct 307  Q
    ||||||||||    
T  13802 ttatatctct 13811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 5e-59; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 108 - 307
Target Start/End: Complemental strand, 46579846 - 46579637
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||||||||||||||    
T  46579846 ttctaaaatctcaacctacaaccatgttaaattcatcttcagaatcacatactctgaattattgaaggttgttcccacccttaccttagtattgatgatc 46579747  T
Q  208 ggcggtctctctccctcttggttcnnnnnnnnncttg----------ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctcc 297  Q
    |||||||||||||||| |||||||         ||||          ||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  46579746 ggcggtctctctccctattggttctcttcttttcttgttttctcaatttttctccaaaaagcagtttcacgtaaaaacttttctaaacctaatttcctcc 46579647  T
Q  298 ttatatctct 307  Q
    ||||||||||    
T  46579646 ttatatctct 46579637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 11085485 - 11085572
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11085485 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 11085572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 14036994 - 14037092
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||    
T  14036994 tatctaaggtctgtaaacagtttctacatcaatctaacaatttttcatcaattaatcatcaattcctcactttaacctaattctccatttttctaaaac 14037092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 14347024 - 14347122
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||    
T  14347024 tatctaaggtctgtaaacagtttctacatcaatctaacaatttttcatcaattaatcatcaattcctcactttaacctaattctccatttttctaaaac 14347122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 30820226 - 30820115
Alignment:
Q  119 caacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctc 218  Q
    |||||||||||| |||||||| ||  |||||||| ||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  30820226 caacctacaacc-tgttaaatccagtttcagaattacatactcagaattactgaaggttagtcccaccctcaccttagtattgatgatcggcggtctctc 30820128  T
Q  219 tccctcttggttc 231  Q
    |||||||||||||    
T  30820127 tccctcttggttc 30820115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 11091611 - 11091698
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||    
T  11091611 ttctaaaacctcaacctacaaccatgttaaattcatcttcataatcacatactcagaattgttgaaggttagtcccacccttacctta 11091698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 14045566 - 14045664
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    |||| |||||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  14045566 tatccaaggtctgtaaacagtttctacatcaacctaacaatttttcatcaattaatcatcaattcctcactttaacctaattctccaattttctaaaac 14045664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 14355596 - 14355694
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    |||| |||||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  14355596 tatccaaggtctgtaaacagtttctacatcaacctaacaatttttcatcaattaatcatcaattcctcactttaacctaattctccaattttctaaaac 14355694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 15203053 - 15203231
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcacttt-aacc-taattctccaattttctaaaa 115  Q
    ||||||||||||||| ||| |||||||||||||  ||||  ||| |||||  ||| | ||||||  ||||||| |||| |||||| | ||||  ||||||    
T  15203053 tatctaaggtctgtacacagtttctacatcaattcaacagttttccatcatctaatcctcaattcatcacttttaaccgtaattcccaaatt--ctaaaa 15203150  T
Q  116 cctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |  ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  15203151 ctacaacctacaaccatgttaaattcattttcagaatcacatactcataattattgaaggttagtcccacccttaccttag 15203231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 1867408 - 1867310
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||||||||| |||||||| ||||||||||||| ||||||||||| ||||||||    
T  1867408 tatctaaggtctgtaaacagtttctacatcaatctaacactttttcatcaattaatcatcaattcctcactttaacctgattctccaattgtctaaaac 1867310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 93 - 231
Target Start/End: Complemental strand, 36685246 - 36685110
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacc 192  Q
    |||||||| |||| |||| |||||  |||||||||||| |||||||| ||  |||||||| ||||||||||||||||||||| || || |||||||||||    
T  36685246 cctaattc-ccaaatttccaaaactacaacctacaacc-tgttaaatccagtttcagaattacatactcagaattattgaaggttggttccacccttacc 36685149  T
Q  193 ttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  36685148 ttagtattgatgatcaacggtctctctccctcttggttc 36685110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 16324747 - 16324834
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaa 105  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  16324747 tatctaagatctgtaaacagtttctacatcaatctatcaacttttcatcaattaatcatcaattcctcactttaacctaattctccaa 16324834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 15007825 - 15007749
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  15007825 tatctaaggtctgtaaacagtttctacatcaatctaacaacttttcatcaattaatcctcaatttctcactttaacc 15007749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 14980755 - 14980670
Alignment:
Q  110 ctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  14980755 ctaaaaactcaacctacaaccatgttaaattcaatttcagaatcacatactcaagattattgaaggttagtcccacccttacctta 14980670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 15410231 - 15410146
Alignment:
Q  110 ctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  15410231 ctaaaaactcaacctacaaccatgttaaattcaatttcagaatcacatactcaagattattgaaggttagtcccacccttacctta 15410146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 15113739 - 15113826
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaa 105  Q
    ||||||||||||  ||||| | |||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  15113739 tatctaaggtctaaaaacagtatctacatcaatctatcaacttttcatcaattaatcatcaattcctcactttaacctaattctccaa 15113826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 15117265 - 15117352
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaa 105  Q
    |||||||||||| |||||| |||||||||||||||| |||||||| ||||||||| ||| |||| |||||||||||||||||||||||    
T  15117265 tatctaaggtctataaacagtttctacatcaatctatcaacttttaatcaattaatcataaattcctcactttaacctaattctccaa 15117352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 19485992 - 19485937
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19485992 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 19485937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 12902144 - 12902242
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaa 115  Q
    ||||||||||||||||||| |||||||||||||||||||| | | |||||||||| | |||| ||||||| |||| ||||||||||||||| |||||||    
T  12902144 tatctaaggtctgtaaacagtttctacatcaatctaacaattctacatcaattaatcctcaacttctcaccttaaccctaattctccaattctctaaaa 12902242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 9724923 - 9724802
Alignment:
Q  74 catcaatttctcactttaa--cctaattctccaattttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattg 171  Q
    |||||||| |||||||| |  |||||||||| ||||  ||||||||||||| |||||||||||||||||||   ||||| |||||||||||  ||||||     
T  9724923 catcaattcctcacttttaaccctaattctcaaatt--ctaaaacctcaacatacaaccatgttaaattcaatatcagattcacatactcaagattattt 9724826  T
Q  172 aagattagtcccacccttacctta 195  Q
    ||| ||||||||||||||||||||    
T  9724825 aaggttagtcccacccttacctta 9724802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 12255171 - 12255096
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||| ||||||||    
T  12255171 tatctaaggtctgtaaacagtttctacatcaatctaacaacttttcatc-attaatcctcaatttctctctttaacc 12255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 22073658 - 22073734
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||| | ||||||    
T  22073658 tatctaaggtctgtaaacagtttctacatcaatctaacaacttttcatccattaatcctcaatttctctcattaacc 22073734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 47832550 - 47832626
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | |||||||||| | ||||||    
T  47832550 tatctaaggtctgtaaacaaattctacatcaatctaacaacttttcatccattaatcctcaatttctctcattaacc 47832626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 16550024 - 16549969
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  16550024 ttagtcccaaccttaccttagtattgatgatcggcagtctctctccctcttggttc 16549969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 16615638 - 16615693
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  16615638 ttagtcccaaccttaccttagtattgatgatcggcagtctctctccctcttggttc 16615693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 16057069 - 16057145
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| | | |||||| | ||||||||    
T  16057069 tatctaaggtctgtaaacagtttctacatcaatttaacaacttttcatctattaatcctaaatttcactctttaacc 16057145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 20219552 - 20219467
Alignment:
Q  21 ctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaa 114  Q
    |||||||||||||||| |||||||||||||        | | |||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  20219552 ctaaggtctgtaaacactttctacatcaat--------tctacatcaattaatcatcaatttctcactttaacctaattctcaaattttctaaa 20219467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 29052201 - 29052146
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||    
T  29052201 ttagtcccacccttaccttagtattgatgatcgacggtttctctccctcttagttc 29052146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 36685073 - 36685019
Alignment:
Q  252 caaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  36685073 caaaaagcagtttcacgtaaaa-cttttctaaacctagtttcctccttatatctct 36685019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 5294374 - 5294312
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||||||||| |||||||||||||| ||||||||| |||||| || |||||||||||    
T  5294374 ttttctccaaaaagcaatttcacgtaaaaacgtttctaaacctagttttcttcttatatctct 5294312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 9177009 - 9176912
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcact-ttaa-cctaattctccaattttctaaaac 116  Q
    |||| |||||||| ||| |||||||||||||||||||| |||||||||||||| |||||| |||||||| |||| |||||| ||| |||| ||||||||    
T  9177009 tctagggtctgtacacagtttctacatcaatctaacaaattttcatcaattaatcatcaa-ttctcactcttaaccctaatcctcaaattctctaaaac 9176912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 11054689 - 11054767
Alignment:
Q  119 caacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagt 197  Q
    |||||||||||| ||||||||||| | |||||||||| | ||| ||||| ||||||| ||||||||||||||||||||||    
T  11054689 caacctacaacc-tgttaaattcaattttcagaatcaaacacttagaatcattgaaggttagtcccacccttaccttagt 11054767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 15095713 - 15095636
Alignment:
Q  119 caacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |||||||||||| ||||||||||| | |||||||||| | ||| ||||||| ||||| |||||||||||||||||||||    
T  15095713 caacctacaacc-tgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttaccttag 15095636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 196
Target Start/End: Complemental strand, 8135340 - 8135237
Alignment:
Q  91 aacctaattctccaattttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccaccctta 190  Q
    |||||||||||| ||||  |||||||  |||||||||||| |||||||||||  |||||||||| | ||| || |||| ||||| |||||| ||||||||    
T  8135340 aacctaattctcaaattc-ctaaaactacaacctacaacc-tgttaaattcaatttcagaatcatacacttaggattagtgaaggttagtctcaccctta 8135243  T
Q  191 ccttag 196  Q
    ||||||    
T  8135242 ccttag 8135237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 15440072 - 15440137
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttc 83  Q
    ||||||| |||||||||||  |||||||||| ||||||||||||||||| ||||| | ||||||||    
T  15440072 tatctaaagtctgtaaacatattctacatcattctaacaacttttcatccattaatcctcaatttc 15440137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 231
Target Start/End: Complemental strand, 5294533 - 5294398
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  5294533 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 5294436  T
Q  192 cttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||| ||  |||||||||||  |||||  ||||||||||    
T  5294435 cttagaatgaatgatcggcggcttctct--ctcttggttc 5294398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 8469283 - 8469384
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | ||||| ||||||||||  ||||||||||||||||    
T  8469283 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaaaattattgaatgttagtcccacccttac 8469380  T
Q  192 ctta 195  Q
    ||||    
T  8469381 ctta 8469384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 5295547 - 5295485
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||||||||| |||||||||||||| ||||||||| || ||| || | |||||||||    
T  5295547 ttttctccaaaaagcaatttcacgtaaaaacgtttctaaacctaattttcttcatatatctct 5295485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 5296720 - 5296658
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||||||||| |||||||||||||| ||||||||| || ||| || | |||||||||    
T  5296720 ttttctccaaaaagcaatttcacgtaaaaacgtttctaaacctaattttcttcatatatctct 5296658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 15624009 - 15624071
Alignment:
Q  134 ttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |||||||||  |||||||||| | ||| ||||||||||||| |||||| ||||||||||||||    
T  15624009 ttaaattcaatttcagaatcatacacttagaattattgaaggttagtctcacccttaccttag 15624071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 2279498 - 2279410
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    ||||||||||||||||||| ||||||  ||||||||||   | | |||||||||  | |||||||||| |||||| |||||||||||||    
T  2279498 tatctaaggtctgtaaacagtttctatgtcaatctaaccgttctacatcaattactcctcaatttctctctttaaccctaattctccaa 2279410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 5295706 - 5295588
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||| | || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  5295706 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaattacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 5295609  T
Q  192 cttagtattgatgatcggcgg 212  Q
    ||||| ||  |||||||||||    
T  5295608 cttagaatgaatgatcggcgg 5295588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 5296879 - 5296761
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||| | || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  5296879 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaattacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 5296782  T
Q  192 cttagtattgatgatcggcgg 212  Q
    ||||| ||  |||||||||||    
T  5296781 cttagaatgaatgatcggcgg 5296761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 16219095 - 16219019
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||| ||||||||| | |||||||||||||||||| | | | |||||||||| | |||||||||| | ||||||    
T  16219095 tatctaacgtctgtaaatagtttctacatcaatctaaccattctacatcaattaatcctcaatttctctcattaacc 16219019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 8941215 - 8941316
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  8941215 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 8941312  T
Q  192 ctta 195  Q
    ||||    
T  8941313 ctta 8941316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 9389094 - 9389011
Alignment:
Q  19 atctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctc 102  Q
    ||||||||| ||||| || |||||||||||||||||  | | ||||||||||   || |||||  |||||||||||||||||||    
T  9389094 atctaaggtttgtaaccagtttctacatcaatctaatcattattcatcaatttctcaccaattcttcactttaacctaattctc 9389011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 10589507 - 10589570
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   ||||||||||||||||||||||||| |||||| |  |||| ||||||||    
T  10589507 tatctaaggtctaggaacaatttctacatcaatctaacaatttttcaccgtttaatcatcaatt 10589570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 16583899 - 16583962
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||||||||||||||| |||||||| |||||| | ||||| ||||||||    
T  16583899 tatctaaggtctaggaacaatttctacatcattctaacaagttttcaccgattaatcatcaatt 16583962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 26212727 - 26212790
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||||||||||||||||||| ||||||||||| |  |||| ||||||||    
T  26212727 tatctaaggtctaggaacaatttctacatcaatctcacaacttttcaccgtttaatcatcaatt 26212790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 27847223 - 27847160
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||| ||||||||||||||||||||||||||| |  |||| ||||||||    
T  27847223 tatctaaggtctaggaacagtttctacatcaatctaacaacttttcaccgtttaatcatcaatt 27847160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 34185147 - 34185210
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||| ||||||||||||||||||||||||||| |  |||| ||||||||    
T  34185147 tatctaaggtctaagaacagtttctacatcaatctaacaacttttcaccgtttaatcatcaatt 34185210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 34201525 - 34201588
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||| ||||||||||||||||||||||||||| |  |||| ||||||||    
T  34201525 tatctaaggtctaagaacagtttctacatcaatctaacaacttttcaccgtttaatcatcaatt 34201588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 39267025 - 39266962
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||||||||||||||| |||||||| |||||| | ||||| ||||||||    
T  39267025 tatctaaggtctaggaacaatttctacatcattctaacaagttttcaccgattaatcatcaatt 39266962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 11973096 - 11973196
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  11973096 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 11973193  T
Q  192 ctt 194  Q
    |||    
T  11973194 ctt 11973196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 3563741 - 3563696
Alignment:
Q  19 atctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    |||||||||||   |||| |||||||||||||||||||||||||||    
T  3563741 atctaaggtctaggaacagtttctacatcaatctaacaacttttca 3563696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 8249158 - 8249117
Alignment:
Q  266 acgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  8249158 acgtgaaaacttttctaaacctagtttcctctttatatctct 8249117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 10628798 - 10628757
Alignment:
Q  266 acgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  10628798 acgtgaaaacttttctaaacctagtttcctctttatatctct 10628757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 10634431 - 10634390
Alignment:
Q  266 acgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  10634431 acgtgaaaacttttctaaacctagtttcctctttatatctct 10634390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 10638494 - 10638453
Alignment:
Q  266 acgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  10638494 acgtgaaaacttttctaaacctagtttcctctttatatctct 10638453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 307
Target Start/End: Complemental strand, 30820074 - 30820041
Alignment:
Q  274 acttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||||| |||||||||||||||||||||    
T  30820074 acttttctaaacctagtttcctccttatatctct 30820041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 10063028 - 10062996
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaatt 70  Q
    |||||||||||||||||||| ||||||||||||    
T  10063028 tttctacatcaatctaacaatttttcatcaatt 10062996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 11768265 - 11768233
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaat 50  Q
    ||||||||||||||||||| |||||||||||||    
T  11768265 tatctaaggtctgtaaacactttctacatcaat 11768233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 17016770 - 17016738
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaat 50  Q
    ||||||||||||||||||| |||||||||||||    
T  17016770 tatctaaggtctgtaaacactttctacatcaat 17016738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 1e-56; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 116 - 307
Target Start/End: Original strand, 26832594 - 26832795
Alignment:
Q  116 cctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtct 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||| || |||||||    
T  26832594 cctcaacctacaaccatgttaaattcatcttcagaatcacatacttagaattattgaaggttactcccacccttaccgtagtattgatggtcagcggtct 26832693  T
Q  216 ctctccctcttggttcnnnnnnnnncttg----------ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatct 305  Q
    ||||||||||||||||         ||||          ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26832694 ctctccctcttggttctcctcttctcttgttttctccctttttctccaaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatatct 26832793  T
Q  306 ct 307  Q
    ||    
T  26832794 ct 26832795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 130 - 307
Target Start/End: Complemental strand, 10774730 - 10774542
Alignment:
Q  130 catgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttgg 228  Q
    ||||||||||||| | |||||||||| | ||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10774730 catgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttgg 10774631  T
Q  229 ttcnnnnnnnnncttg----------ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||         ||||          |||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||    
T  10774630 ttctcctcttctcttgttttctccctttttctccaaaaagcagtgtcacgtaaaaacttttctaaacctagtttactccttatatctct 10774542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 123 - 307
Target Start/End: Complemental strand, 21554374 - 21554179
Alignment:
Q  123 ctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccc 222  Q
    |||||||| |||||||| ||  |||||||| || |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  21554374 ctacaacc-tgttaaatccagtttcagaattacgtactcagaattactgaaggttagtcccacccttaccttagtattgatgatcagcggtctctctccc 21554276  T
Q  223 tcttggttcnnnnnnnnncttg----------ttttctccaaaaagcagtttcacgt--aaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||         ||||          |||||||||||||||||||||||||  |||||||||||||||| |||| | ||||||||||||||    
T  21554275 tcttggttctcttcttttcttgttttctccctttttctccaaaaagcagtttcacgtaaaaaaacttttctaaacctagtgttctccttatatctct 21554179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 21556999 - 21556827
Alignment:
Q  145 ttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttg 244  Q
    |||||||| ||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||         ||||    
T  21556999 ttcagaattacatattcagaattactgaaggttagtctcacccttaccttagtattgatgatcggcggtctctctccctcttggttctctttttttcttg 21556900  T
Q  245 ----------ttttctccaaaaagcagtttcacgt-aaaaacttttctaaacttagtttcctccttatatctct 307  Q
              ||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||    
T  21556899 ttttctccctttttctccaaaaagcag-ttcacgtaaaaaacttttctaaacctagtttcctccttatatctct 21556827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 312
Target Start/End: Original strand, 30616649 - 30616793
Alignment:
Q  178 agtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttgtttt----------ctccaaaaagcagtttcac 267  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||         ||||||||          |||||||||||||||||||    
T  30616649 agtcccacccttaccataatattgatgatcggcggtctctctccctcttggttctcctcttctcttgttttctccctttttctccaaaaagcagtttcac 30616748  T
Q  268 gtaaaaacttttctaaacttagtttcctccttatatctctgctcc 312  Q
    |||||| |||| |||||||||||||||||||||||||||| ||||    
T  30616749 gtaaaagctttgctaaacttagtttcctccttatatctctcctcc 30616793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 22177522 - 22177448
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa 92  Q
    ||||||||||||||||||| |||||||||||||||||||| | | |||||||||| |||||||||||||||||||    
T  22177522 tatctaaggtctgtaaacagtttctacatcaatctaacaattctacatcaattaatcatcaatttctcactttaa 22177448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 17011761 - 17011816
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17011761 ttagtcccacccttaccttagtattgatgatcggcggtctctctccttcttggttc 17011816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 31456993 - 31457048
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31456993 ttagtctcacccttaccttagtattgatgatcggcggtctctctccctcttggttc 31457048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 17876205 - 17876291
Alignment:
Q  145 ttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||| ||||||||||||||||||| |||||  ||||||||| ||||  | |||||||| ||||||||||||||||||||||    
T  17876205 ttcagaatcatatactcagaattattgaaggttagtttcacccttacattagattagatgatcgacggtctctctccctcttggttc 17876291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 22240859 - 22240797
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  22240859 ttttctccaaaaagcagtttcacgtaaaaacttttataaatctagtttcctccttatatctct 22240797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 22243847 - 22243785
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  22243847 ttttctccaaaaagcagtttcacgtaaaaacttttataaatctagtttcctccttatatctct 22243785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 22241920 - 22241793
Alignment:
Q  190 accttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttgttttctcca----------aaaagcagtttcacgtaaaaactttt 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||         ||||||||||||           ||||||||||| ||||||||||||||    
T  22241920 accttagtattgatgatcgacggtctctctccctcttggttctcctcttctcttgttttctccctttttatccgaaaagcagttttacgtaaaaactttt 22241821  T
Q  280 ctaaacttagtttcctccttatatctct 307  Q
    |||||| |||||||||||||||||||||    
T  22241820 ctaaacctagtttcctccttatatctct 22241793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 22242916 - 22242789
Alignment:
Q  190 accttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttgttttctcca----------aaaagcagtttcacgtaaaaactttt 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||         ||||||||||||           ||||||||||| ||||||||||||||    
T  22242916 accttagtattgatgatcgacggtctctctccctcttggttctcctcttctcttgttttctccctttttatccgaaaagcagttttacgtaaaaactttt 22242817  T
Q  280 ctaaacttagtttcctccttatatctct 307  Q
    |||||| |||||||||||||||||||||    
T  22242816 ctaaacctagtttcctccttatatctct 22242789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 19616529 - 19616469
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaatta 168  Q
    ||||||||| ||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  19616529 ttctaaaacttcaacttacaaccatgttaaattcaatttcagaatcacatactcagaatta 19616469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 21914542 - 21914491
Alignment:
Q  145 ttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  21914542 ttcagaattacatactcagaattattgaaggttagtcccacccttaccttag 21914491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 26011413 - 26011346
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctc 85  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||||| ||||| | ||||||||||    
T  26011413 tatctaaggtctgtaaatagtttctacatcaatttaacaacttttcatccattaatcctcaatttctc 26011346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 36315555 - 36315618
Alignment:
Q  244 gttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||||||||||||||||||||||||  ||||||||| |||||| || |||||||||||    
T  36315555 gttttctccaaaaagcagtttcacgtaaaaaagtttctaaacatagttttcttcttatatctct 36315618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 21328899 - 21328811
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcac-tttaacctaattctccaa 105  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||   |||||||||| | || ||||||||| |||||    
T  21328899 tatctaatgtctgtaaacaaattctacatcaatccaacaacttttcatccattaattctcaatttctctcattaaacctaattttccaa 21328811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 22144791 - 22144867
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||   |||||||||| ||| ||||    
T  22144791 tatctaaggtctgtaaatagtttctacataaatctaacaacttttcatccattaattctcaatttctctcttaaacc 22144867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 21870959 - 21870880
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaattaaacatcaattt-ctcactttaa-cctaattctccaattttctaaaa 115  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||| ||| |||||| |||||||||| |||| |||||||    
T  21870959 tttctacatcaatctaacaacttttcaccgattaatcatcaatttcctctctttaaccctaattctcaaattctctaaaa 21870880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 21875239 - 21875160
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaattaaacatcaattt-ctcactttaa-cctaattctccaattttctaaaa 115  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||| ||| |||||| |||||||||| |||| |||||||    
T  21875239 tttctacatcaatctaacaacttttcaccgattaatcatcaatttcctctctttaaccctaattctcaaattctctaaaa 21875160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 29448885 - 29448928
Alignment:
Q  188 ttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  29448885 ttaccttagtattgatgatcggtggtctctctccctcttggttc 29448928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 21405704 - 21405627
Alignment:
Q  119 caacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||| |||||| ||||||||||| | |||||||||| ||||||||||||||| ||| |||||| ||||||||||||||    
T  21405704 caacccacaacc-tgttaaattcaattttcagaatcatatactcagaattattaaaggttagtctcacccttaccttag 21405627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 22240924 - 22240883
Alignment:
Q  190 accttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  22240924 accttagtattgatgatcgacggtctctctccctcttggttc 22240883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 22243912 - 22243871
Alignment:
Q  190 accttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  22243912 accttagtattgatgatcgacggtctctctccctcttggttc 22243871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 20026249 - 20026161
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    ||||||||||||||||||| ||| ||||| |||||||| | | | |||||||||| | |||| ||||||| |||| |||||||||||||    
T  20026249 tatctaaggtctgtaaacagtttttacattaatctaaccattctacatcaattaatcctcaaattctcaccttaaccctaattctccaa 20026161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 22075700 - 22075763
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||||||||||||||||||||||||||||||| |  |||| ||||||||    
T  22075700 tatctaaggtctaggaacaatttctacatcaatctaacaacttttcaccgtttaatcatcaatt 22075763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 22627947 - 22627984
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaac 55  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  22627947 tatctaaggtctgtaaacagtttctacatcaatctaac 22627984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 2154053 - 2153952
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  2154053 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 2153956  T
Q  192 ctta 195  Q
    ||||    
T  2153955 ctta 2153952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 5888553 - 5888502
Alignment:
Q  19 atctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaatt 70  Q
    ||||||||||||||| || |||||||||||||||||| | | ||||||||||    
T  5888553 atctaaggtctgtaaccagtttctacatcaatctaaccattgttcatcaatt 5888502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 8286254 - 8286191
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||||||||||| ||||||||||||||||||| |  |||| ||||||||    
T  8286254 tatctaaggtctaagaacaatttctacctcaatctaacaacttttcaccgtttaatcatcaatt 8286191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 13026020 - 13026067
Alignment:
Q  34 acaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||||||||||||||||||||| |  |||| ||||||||    
T  13026020 acaatttctacatcaatctaacaacttttcaccgtttaatcatcaatt 13026067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 13096204 - 13096251
Alignment:
Q  34 acaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||||||||||||||||||||| |  |||| ||||||||    
T  13096204 acaatttctacatcaatctaacaacttttcaccgtttaatcatcaatt 13096251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 29330714 - 29330815
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  29330714 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 29330811  T
Q  192 ctta 195  Q
    ||||    
T  29330812 ctta 29330815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 9078694 - 9078740
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   |||| |||||||||||||||||||||||||||    
T  9078694 tatctaaggtctaggaacagtttctacatcaatctaacaacttttca 9078740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 21740919 - 21740885
Alignment:
Q  21 ctaaggtctgtaaacaatttctacatcaatctaac 55  Q
    |||||||||||||||| ||||||||||||||||||    
T  21740919 ctaaggtctgtaaacagtttctacatcaatctaac 21740885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 21985530 - 21985485
Alignment:
Q  36 aatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||||||||||||||||||| |  |||| ||||||||    
T  21985530 aatttctacatcaatctaacaacttttcaccgtttaatcatcaatt 21985485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 27767885 - 27767844
Alignment:
Q  266 acgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||| | ||||||||||| |||||||||||||||||||||    
T  27767885 acgtaatatcttttctaaacctagtttcctccttatatctct 27767844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 274
Target Start/End: Complemental strand, 41094758 - 41094729
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaa 274  Q
    ||||||||||||||||||||||||||||||    
T  41094758 ttttctccaaaaagcagtttcacgtaaaaa 41094729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 17516365 - 17516290
Alignment:
Q  120 aacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||||||    
T  17516365 aacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 17516290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 18318329 - 18318297
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaatt 70  Q
    |||||||||||||||||||| ||||||||||||    
T  18318329 tttctacatcaatctaacaatttttcatcaatt 18318297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 27988280 - 27988204
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||| |||||||| ||| |||||||||||||||||| | |||||| |  |||| ||||||||   ||||||||||    
T  27988280 tatctagggtctgtacacagtttctacatcaatctaactatttttcaccgtttaatcatcaattctacactttaacc 27988204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 21995751 - 21995628
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||    
T  21995751 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcaaaattattgaaggttagtcccacccttatcttagtattgatgatc 21995652  T
Q  208 ggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||    
T  21995651 ggcggtctctctccctcttggttc 21995628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 27652567 - 27652469
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  27652567 tatctaaggtctgtacacagtttctacatcaatctaacaatttttcatcaattaatcatcaatttctcactttaacttaattctccaattctctaaaac 27652469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 132 - 307
Target Start/End: Complemental strand, 12327807 - 12327621
Alignment:
Q  132 tgttaaattcatcttcagaatcacata-ctcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggtt 230  Q
    |||||||| ||| |||||||||| | | || |||||||  |||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12327807 tgttaaatccattttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccctcttggtt 12327708  T
Q  231 cnnnnnnnnncttgttttctc----------caaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |         |||||||||||          |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12327707 ctcctcttctcttgttttctctctttttctccaaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatatctct 12327621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 50687389 - 50687486
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaacc 117  Q
    |||||||||| |||||| |||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||| |||| |||||||||    
T  50687389 tctaaggtctataaacagtttctacatcaatctaacaatttttcatcaattaatcatcaatttctccctttaacctaattctcaaattctctaaaacc 50687486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 12272365 - 12272452
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaa 105  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||| ||||||| |||||||| |||||||||||||||||||||||    
T  12272365 tatctaaggtctgtaaacattttctacatcaatctatcaacttttcagcaattaatcatcaattcctcactttaacctaattctccaa 12272452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 21342867 - 21342967
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaac 116  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |   ||||||||||||||| |||||||||| |||| ||||||||    
T  21342867 tatctaaggtctgcaaacaatttctacatcaatctaacaatttttcatcaattaatctcaaatttctcactttaaccctaattctcaaattctctaaaac 21342966  T
Q  117 c 117  Q
    |    
T  21342967 c 21342967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 21347732 - 21347832
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaac 116  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |   ||||||||||||||| |||||||||| |||| ||||||||    
T  21347732 tatctaaggtctgcaaacaatttctacatcaatctaacaatttttcatcaattaatctcaaatttctcactttaaccctaattctcaaattctctaaaac 21347831  T
Q  117 c 117  Q
    |    
T  21347832 c 21347832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 16093197 - 16093099
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaa 115  Q
    ||||||| ||||||| ||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||    
T  16093197 tatctaatgtctgtacacagtttctacaccaatctaacaaattttcatcaattaaccatcaatttctcactttaaccctaattctcaaattctctaaaa 16093099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 177 - 307
Target Start/End: Complemental strand, 24007243 - 24007103
Alignment:
Q  177 tagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttgttttctcc----------aaaaagcagtttca 266  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||         || |||||||||          ||||||||||||||    
T  24007243 tagtcccacccttaccttagtatagatgatcgacggtctctctccctcttggttctcctcttctctcgttttctccctttttctccaaaaagcagtttca 24007144  T
Q  267 cgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  24007143 cgtaaaaacttttctaaacctagtttcctccttgtatctct 24007103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 132 - 307
Target Start/End: Original strand, 51336467 - 51336660
Alignment:
Q  132 tgttaaattcatcttcagaatcacata-ctcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggtt 230  Q
    |||||||| ||| |||||||||| | | || |||||||  |||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  51336467 tgttaaatccattttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctccctccctcttggtt 51336566  T
Q  231 cnnnnnnnnncttgttttctcc-----------------aaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |         ||||||||||||                 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  51336567 ctcttcttctcttgttttctcccttttttttttctttccaaaaagcagtttcacgtaaaaacttttctaaacatagtttcctccttatatctct 51336660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 16381910 - 16381995
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctc 102  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  16381910 tatctaaggtctgtacacagtttctacatcaatctaacaacttttcatccattaatcatcaattcctcactttaaccctaattctc 16381995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 16759468 - 16759556
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    ||||||||||||||||||| |||||||||||||||||||  | | |||||||||| | ||||||||||||||||| |||||||||||||    
T  16759468 tatctaaggtctgtaaacagtttctacatcaatctaacagttctacatcaattaatcctcaatttctcactttaaccctaattctccaa 16759556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 29763651 - 29763596
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29763651 ttagtcccacccttaccttagtattgatgatcgtcggtctctctccctcttggttc 29763596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 22921246 - 22921170
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||| | ||||||    
T  22921246 tatctaaggtatgtaaacagtttctacatcaatctaacaacttttcatccattaatcctcaatttctctcattaacc 22921170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 41049348 - 41049272
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| |||||||  ||||||||||| | | |||||||||| |||||||||||||||||||||    
T  41049348 tatctaaggtctgtaaacagtttctaccccaatctaacaattctgcatcaattaatcatcaatttctcactttaacc 41049272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 46197764 - 46197709
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  46197764 ttagtcccacccttaccttagtattgatgatcgacagtctctctccctcttggttc 46197709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 50001509 - 50001556
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccct 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50001509 ttagtcccacccttaccttagtattgatgatcggcggtctctctccct 50001556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 16367591 - 16367529
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaat 80  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | ||||| |||||||    
T  16367591 tatctaaggtctgtaaacagtttctacatcaatctaacaacttttcaccgattaatcatcaat 16367529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 22350692 - 22350769
Alignment:
Q  119 caacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |||||||||||  ||||||||||| | |||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  22350692 caacctacaact-tgttaaattcaattttcagaatcatatactcagaattattgaaggttagtcccacccttaccttag 22350769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 35260457 - 35260359
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaa 115  Q
    |||||||||| |||||||| |||||||||||||||||||| | | ||||||||||   |||||||||| | |||| ||||||||||||||| |||||||    
T  35260457 tatctaaggtatgtaaacagtttctacatcaatctaacaattctacatcaattaattctcaatttctcgccttaaccctaattctccaattctctaaaa 35260359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 48521287 - 48521377
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcact-ttaacctaattctccaatt 107  Q
    ||||||||||||||||||| ||||||||| ||| |||||  |||||||||  ||| |||||||| |||||| |||||||||||||||||||    
T  48521287 tatctaaggtctgtaaacactttctacataaatgtaacactttttcatcatctaatcatcaattcctcactcttaacctaattctccaatt 48521377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 21708126 - 21708201
Alignment:
Q  120 aacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| ||||||||| || | |||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  21708126 aacctacaac-atgttaaatccaattttcagaattacatactcagaattattgaaggttagtcccacccttacctta 21708201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 21712669 - 21712744
Alignment:
Q  120 aacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| ||||||||| || | |||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  21712669 aacctacaac-atgttaaatccaattttcagaattacatactcagaattattgaaggttagtcccacccttacctta 21712744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 50613415 - 50613316
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaac 116  Q
    ||||||||||||||||||| ||||||| |||||   |||| | | |||||||||| ||||||||| ||||||||| |||||||||| | |||||||||||    
T  50613415 tatctaaggtctgtaaacactttctacctcaattatacaattctacatcaattaatcatcaatttatcactttaaccctaattctcaacttttctaaaac 50613316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 50621243 - 50621144
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaac 116  Q
    ||||||||||||||||||| ||||||| |||||   |||| | | |||||||||| ||||||||| ||||||||| |||||||||| | |||||||||||    
T  50621243 tatctaaggtctgtaaacactttctacctcaattatacaattctacatcaattaatcatcaatttatcactttaaccctaattctcaacttttctaaaac 50621144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 22145612 - 22145550
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||| ||||||| |||||||||||| |||||||||||||| ||||||||||||| |||||||    
T  22145612 ttttccccaaaaaacagtttcacgtagaaacttttctaaacctagtttcctccttgtatctct 22145550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 21857265 - 21857189
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||| |||||||| |||||||||||||||||| | | | |||||||||| | |||||||||| ||||||||    
T  21857265 tatctaaggtttgtaaacagtttctacatcaatctaaccattctacatcaattaatcctcaatttctctctttaacc 21857189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 51476981 - 51477046
Alignment:
Q  132 tgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||||||||| | |||||||||| ||||||| ||||||| ||| |||||||||||||||||||||    
T  51476981 tgttaaattcaattttcagaatcatatactcaaaattattaaaggttagtcccacccttaccttag 51477046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 33681752 - 33681816
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaattt 82  Q
    ||||||||||||||||||| |||||||||||||||||| | | | |||||||||| | |||||||    
T  33681752 tatctaaggtctgtaaacagtttctacatcaatctaaccattatgcatcaattaatcctcaattt 33681816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 52927429 - 52927365
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaattt 82  Q
    ||||||||||||||||||| |||||||||||||||||| | | | |||||||||| | |||||||    
T  52927429 tatctaaggtctgtaaacagtttctacatcaatctaaccattctacatcaattaatcctcaattt 52927365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 28193831 - 28193748
Alignment:
Q  19 atctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctc 102  Q
    ||||||||||||||| || |||||||||||||||||  | | ||||||||||   || |||||  |||||||||||||||||||    
T  28193831 atctaaggtctgtaatcagtttctacatcaatctaatcattattcatcaatttctcaccaattcttcactttaacctaattctc 28193748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 38800781 - 38800718
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||| |  |||| ||||||||    
T  38800781 tatctaaggtctagaaacagtttctacatcaatctaacaacttttcaccgtttaatcatcaatt 38800718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 23592974 - 23592908
Alignment:
Q  165 attattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||  ||||||||||||||||||||| ||  |||||||||||  |||||| ||||||||||    
T  23592974 attattgaatgttagtcccacccttaccttagaatgaatgatcggcggcttctctctctcttggttc 23592908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 35981066 - 35981012
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaa 72  Q
    ||||||||||||||||||| |||||||||||||||||| | | | ||||||||||    
T  35981066 tatctaaggtctgtaaacagtttctacatcaatctaaccattctacatcaattaa 35981012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 21995593 - 21995550
Alignment:
Q  256 aagcagtttcacgtaaaaacttttctaaacttagtttcctcctt 299  Q
    |||||||||||||||||||||||||||||| |||| | ||||||    
T  21995593 aagcagtttcacgtaaaaacttttctaaacctagtcttctcctt 21995550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 27250119 - 27250056
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   ||||||||||||| |||||||||||||||||| |  |||| ||||||||    
T  27250119 tatctaaggtctaggaacaatttctacaccaatctaacaacttttcaccgtttaatcatcaatt 27250056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 49261867 - 49261950
Alignment:
Q  19 atctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctc 102  Q
    ||||||||||| ||| || |||||||||||||||||| | | ||||||| ||   || |||||  |||||||||||||||||||    
T  49261867 atctaaggtctataaccagtttctacatcaatctaaccattattcatcactttctcaccaattcttcactttaacctaattctc 49261950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 274
Target Start/End: Complemental strand, 23592885 - 23592855
Alignment:
Q  244 gttttctccaaaaagcagtttcacgtaaaaa 274  Q
    |||||||||||||||||||||||||||||||    
T  23592885 gttttctccaaaaagcagtttcacgtaaaaa 23592855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 41373392 - 41373458
Alignment:
Q  165 attattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||  ||||||||||||||||||||| ||  |||||||||||  |||||  ||||||||||    
T  41373392 attattgaatgttagtcccacccttaccttagaatgaatgatcggcggcttctctatctcttggttc 41373458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 44822071 - 44822021
Alignment:
Q  145 ttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||| ||||| ||| ||||||||||||||| |||||||||| |||||||||    
T  44822071 ttcataatcatataatcagaattattgaaggttagtcccactcttacctta 44822021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 13527623 - 13527582
Alignment:
Q  266 acgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  13527623 acgtgaaaacttttctaaacctagtttcctctttatatctct 13527582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 22777239 - 22777288
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatca 67  Q
    ||||||||||||||||||| |||||||||||||   |||| |||||||||    
T  22777239 tatctaaggtctgtaaacactttctacatcaattctacaatttttcatca 22777288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 63
Target Start/End: Complemental strand, 50209577 - 50209548
Alignment:
Q  34 acaatttctacatcaatctaacaacttttc 63  Q
    ||||||||||||||||||||||||||||||    
T  50209577 acaatttctacatcaatctaacaacttttc 50209548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 14237730 - 14237655
Alignment:
Q  120 aacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| ||||||||| || | |||||||||| | ||| |  ||||||||| |||||||||||||||||||||    
T  14237730 aacctacaac-atgttaaatccaattttcagaatcatagacttaagattattgaatattagtcccacccttacctta 14237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 22050451 - 22050349
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| || |||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  22050451 cctaattctcaaattctcaaaaac-taaacctacaac-atattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 22050354  T
Q  192 cttag 196  Q
    |||||    
T  22050353 cttag 22050349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 34510538 - 34510586
Alignment:
Q  33 aacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||||||||||||||| ||| ||||  |||| ||||||||    
T  34510538 aacaatttctacatcaatctaacaagtttccatcgtttaatcatcaatt 34510586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 46560055 - 46560130
Alignment:
Q  120 aacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||||||    
T  46560055 aacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 46560130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 105; Significance: 2e-52; HSPs: 4)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 5262 - 5374
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  5262 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcataattattgaaggttagtcccacccttaccttagtattgatgatc 5361  T
Q  208 ggcggtctctctc 220  Q
    |||||||||||||    
T  5362 ggcggtctctctc 5374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 12282 - 12394
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  12282 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcataattattgaaggttagtcccacccttaccttagtattgatgatc 12381  T
Q  208 ggcggtctctctc 220  Q
    |||||||||||||    
T  12382 ggcggtctctctc 12394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 5411 - 5471
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||| ||||||||||  ||||||||||||| |||| |||||||||||||||||||||    
T  5411 ttttctccaagaagcagtttc--gtaaaaacttttccaaacctagtttcctccttatatctct 5471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 12431 - 12491
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||| ||||||||||  ||||||||||||| |||| |||||||||||||||||||||    
T  12431 ttttctccaagaagcagtttc--gtaaaaacttttccaaacctagtttcctccttatatctct 12491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 108 - 303
Target Start/End: Original strand, 1404 - 1608
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || ||| ||| ||||||||||||||||||||||||||||    
T  1404 ttctaaaacctcaacctacaaccatgttaa-ttcatcttcagaatcacatactcaggatttttaaagtttaatcccacccttaccttagtattgatgatc 1502  T
Q  208 ggcggtctctctccctcttggttcnnnnnnnnncttgttttctc----------caaaaagcagtttcacgtaaaaacttttctaaacttagtttcctcc 297  Q
    ||||| || ||||||| |||||||         |||||||||||          | |||||||||||||||||||||||||||||||| |||||||||||    
T  1503 ggcggcctgtctcccttttggttctcctcttctcttgttttctcccttttttctccaaaagcagtttcacgtaaaaacttttctaaacctagtttcctcc 1602  T
Q  298 ttatat 303  Q
    ||||||    
T  1603 ttatat 1608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 2058 - 2154
Alignment:
Q  21 ctaaggtctgtaaacaatttctacatcaatctaacaactttt-catcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    |||||||||||| ||| |||||||||||||||||||| |||| ||||||||||  |||||||||||||||||||||||||||| |||| || |||||    
T  2058 ctaaggtctgtacacagtttctacatcaatctaacaattttttcatcaattaattatcaatttctcactttaacctaattctcaaattctcaaaaac 2154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 176 - 307
Target Start/End: Original strand, 15305 - 15437
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttgttttctccaaaaagcagtttcacgtaaaa-a 274  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||         ||||||||||||||||||||||||||||||||| |    
T  15305 ttagtcccacccttaccttagtaatgatgatcggcgatctctctccctcttggttctccttttctcttgttttctccaaaaagcagtttcacgtaaaaga 15404  T
Q  275 cttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||| |||||||||||||||||||||    
T  15405 cttttctaaacctagtttcctccttatatctct 15437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 119 - 311
Target Start/End: Original strand, 9036 - 9243
Alignment:
Q  119 caacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctc 218  Q
    |||||||||||| |||||||| ||  |||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9036 caacctacaacc-tgttaaatccagtttcagaattacatactcagaattactgaaggttagtcccacccttaccttagtattgatgatcggcggtctctc 9134  T
Q  219 tccctcttggttcnnnnnnnnncttgttttc----------------tccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttata 302  Q
    ||||| |||||||         |||||||||                |||||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  9135 tccctattggttctcttcttctcttgttttctccctttttttttctttccaaaaatcagtttcacgcaaaaacttttctaaacctagtttcctccttata 9234  T
Q  303 tctctgctc 311  Q
    |||||||||    
T  9235 tctctgctc 9243  T

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Target: scaffold0074 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 1903 - 1991
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  1903 ttctaaaacctcaacctacaaccatgttaaattcatcttcataatcacatactcagaattattgaaggttagtcccacccttaccttag 1991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 62505 - 62418
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  62505 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaatcatcaattcctcactttaacctaattctccaa 62418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 58612 - 58644
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaat 50  Q
    ||||||||||||||||||| |||||||||||||    
T  58612 tatctaaggtctgtaaacactttctacatcaat 58644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 68262 - 68349
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  68262 ttctaaaacctcaacctacagccatgttaaattcatcttcagaatcacatactcagaattattgaaggttagtcccacccttacctta 68349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 22674 - 22576
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  22674 tatctaaggtctataaacagtttctacatcaatctaacaacttttcatcaattaatcatcaatttctcactttaacctaattctcaaattctctaaaac 22576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 10939 - 10761
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa--cctaattctccaattttctaaaa 115  Q
    ||||||||||||||| |||||||||||||||||  ||||  ||| |||||  ||| |||||||||   ||||| |  |||||||| | |||| |  ||||    
T  10939 tatctaaggtctgtacacaatttctacatcaattcaacaggtttccatcatctaatcatcaatttacaacttttaaccctaattcccaaattat--aaaa 10842  T
Q  116 cctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    | |||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  10841 cttcaacctacaaccatgttaaattcaatttcagaatcacatactcataattattgaaggttagtcccacccttaccttag 10761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 130 - 307
Target Start/End: Original strand, 5352 - 5540
Alignment:
Q  130 catgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttgg 228  Q
    ||||||||||||| | |||||||||| | ||| ||||||| ||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  5352 catgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttaccttagaattaatgatcggcggtctctctccctcttgg 5451  T
Q  229 ttcnnnnnnnnncttg----------ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||         ||||          |||||||||||||||| | |||||||||||||||||||||| |||||| ||||||||||||||    
T  5452 ttctcctcttctcttgttttctccctttttctccaaaaagcattgtcacgtaaaaacttttctaaacctagtttactccttatatctct 5540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 12202 - 12100
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatc 207  Q
    ||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | ||||    
T  12202 ttctaaaacttcaacctacaaccatgttaaattcgatttcagaatcacatactcagaattattgaaggttagtcccacccttaccttaggattaacgatc 12103  T
Q  208 ggc 210  Q
    |||    
T  12102 ggc 12100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 498933 - 499111
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa--cctaattctccaattttctaaaa 115  Q
    ||||||||||||||| ||| |||||||||||||  ||||  | | |||||  ||| ||||||||  | ||||| |  |||||||| | ||||  ||||||    
T  498933 tatctaaggtctgtacacagtttctacatcaattcaacagttctccatcatctaatcatcaattcattacttttaaccctaattcccaaatt--ctaaaa 499030  T
Q  116 cctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |  ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  499031 ctacaacctacaaccatgttaaattcattttcagaatcacatactcaaaattattgaaggttagtcccacccttaccttag 499111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 11854 - 11942
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||| |||||||| |||||    
T  11854 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcataattattggaggttagtctcacccttatcttag 11942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 341 - 278
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||  | ||||||||||||||||||||||||||||||| |  |||| ||||||||    
T  341 tatctaaggtctagagacaatttctacatcaatctaacaacttttcaacgtttaatcatcaatt 278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 69; Significance: 6e-31; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 4743 - 4839
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||| || |||||    
T  4743 tctaaggtctgtacacagtttctacatcaatctaacaatttttcatcaattaatcatcaatttctcactttaacctaattctcaaattctcaaaaac 4839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 13947 - 14045
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaa 115  Q
    ||||||||||||||||||| |||||||||||||||||||| | |  ||||||||| | |||||||||||| |||| |||||||||| |||| |||||||    
T  13947 tatctaaggtctgtaaacagtttctacatcaatctaacaattctatatcaattaatcctcaatttctcaccttaaccctaattctctaattctctaaaa 14045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 15493 - 15417
Alignment:
Q  30 gtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    ||||||| |||||||||||||||||| | | | |||||||||| | |||||||||||||| || |||||||||||||    
T  15493 gtaaacagtttctacatcaatctaaccattctacatcaattaatcctcaatttctcacttaaaccctaattctccaa 15417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 33843 - 33747
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||| || |||||    
T  33843 tctaaggtctgtacacagtttctacatcaatctaacaatttttcatcaattaatcatcaatttctcactttaacctaattctcaaattctcaaaaac 33747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 28379 - 28329
Alignment:
Q  145 ttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||||||    
T  28379 ttcagaatcatatactcagaattattgaagggtagtcccacccttacctta 28329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 25875 - 25974
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaacc 117  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||| || ||||| |||||||||||||||||||| |||| |||||||||    
T  25875 tatctaaggtctgtaaacagtttttacatcaatctaacaatttttcatcaattaatcaccaattcctcactttaacctaattctcaaattctctaaaacc 25974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 118930 - 118755
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcac-tttaacctaattctccaattttctaaaac 116  Q
    ||||||| ||||||||||| |||||||||||||||||||  |||||||||  ||| |||||||| ||||| ||||||||| ||||||||  |||| |||     
T  118930 tatctaaagtctgtaaacactttctacatcaatctaacactttttcatcatctaatcatcaattcctcacttttaacctagttctccaa--ttctcaaaa 118833  T
Q  117 ctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    || ||||| ||| ||||||||||  |  |||||| |||||||||||  |||||||||| ||||||||||||||||||||    
T  118832 ctaaacctccaa-catgttaaatctaatttcagattcacatactcaagattattgaaggttagtcccacccttacctta 118755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 185010 - 185110
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  185010 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 185107  T
Q  192 ctt 194  Q
    |||    
T  185108 ctt 185110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 86336 - 86423
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaa 105  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  86336 tatctaaggtttgtaaacagtttctacatcaatctaacaacttttcatcaattaatcatcaattcctcaatttaacctaattctccaa 86423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 55906 - 55994
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  55906 ttctaaaactttaacctacaaccatgttaaattcaatttcagaatcacatactcagaattattgaaggttagtctcacccttaccttag 55994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 22141 - 22228
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    ||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  22141 ttctaaaactttaacctacaaccatgttaaattcaatttcagaatcacatactcagaattattgaaggttagtctcacccttacctta 22228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 10103 - 10152
Alignment:
Q  146 tcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||||||||    
T  10103 tcagaatcacatactcaaaattattgaaggttagtctcacccttacctta 10152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 40614 - 40658
Alignment:
Q  34 acaatttctacatcaatctaacaacttttcatcaattaaacatca 78  Q
    ||||||||||||||||||||||||||||||| || |||| |||||    
T  40614 acaatttctacatcaatctaacaacttttcaccatttaatcatca 40658  T

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Target: scaffold0379 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 3981 - 3892
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||| |||||||| ||||||||||||    
T  3981 ttctaaaacctcaacctacaaccatgttaaattcaattttcagaattacatactcataattattgaaggttagtccctcccttaccttag 3892  T

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Target: scaffold0379; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 13972 - 13886
Alignment:
Q  111 taaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |||||||||||||||||||||||||||||||| | || ||||| ||||||||| ||||||||||| || ||||||||||||||||||    
T  13972 taaaacctcaacctacaaccatgttaaattcaatttttagaattacatactcacaattattgaaggttggtcccacccttaccttag 13886  T

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Target: scaffold0104 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 14976 - 15131
Alignment:
Q  162 agaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttgtttt----------ctc 251  Q
    ||||||||  ||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||         ||||||||          |||    
T  14976 agaattatataagtttagtcccaccctcaccttagtattgatgatcgacggtctctctccctcttggttctcctcttctcttgttttctccctttttctc 15075  T
Q  252 caaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||||||||| |||||||||||||| || |||||||||||||||||||||    
T  15076 caaaaagcagtttcacttaaaaacttttctacacctagtttcctccttatatctct 15131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 16996 - 17151
Alignment:
Q  162 agaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttgtttt----------ctc 251  Q
    ||||||||  ||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||         ||||||||          |||    
T  16996 agaattatataagtttagtcccaccctcaccttagtattgatgatcgacggtctctctccctcttggttctcctcttctcttgttttctccctttttctc 17095  T
Q  252 caaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    |||||||||||||||| |||||||||||||| || |||||||||||||||||||||    
T  17096 caaaaagcagtttcacttaaaaacttttctacacctagtttcctccttatatctct 17151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 29504 - 29604
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaac 116  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |   ||||||||||||||| |||||||||| |||| ||||||||    
T  29504 tatctaaggtctgtaaacagtttctacatcaatctaacaatttttcatcaattaatctcaaatttctcactttaaccctaattctcaaattctctaaaac 29603  T
Q  117 c 117  Q
    |    
T  29604 c 29604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 81690 - 81752
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  81690 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacctagtttcctccttatatctct 81752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 83108 - 83170
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||| || |||||||||||    
T  83108 ttttctccaaaaagcagtttcacgtaaaaacgtttctaaacctagttttcttcttatatctct 83170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 17644 - 17544
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaa-tttctcactttaa-cctaattctccaattttctaaaa 115  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| |||||||||| |||| |||||||    
T  17644 tatctaaggtctgtaaacagtttctacatcaatctaacaatttttcatcaattaatc-tcaattttctcactttaaccctaattctcaaattctctaaaa 17546  T
Q  116 cc 117  Q
    ||    
T  17545 cc 17544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 97827 - 97912
Alignment:
Q  22 taaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaatt 107  Q
    ||||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  97827 taaggtctgtacacagttcctacatcaatctaacaatttttcatcaattaatcatcaatttatcactttaacctaattctcaaatt 97912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 107105 - 107190
Alignment:
Q  22 taaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaatt 107  Q
    ||||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  107105 taaggtctgtacacagttcctacatcaatctaacaatttttcatcaattaatcatcaatttatcactttaacctaattctcaaatt 107190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 1316 - 1392
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| |||||||||||||||||||| | | |||||||||| |||||||||||||||||||||    
T  1316 tatctaaggtctgtaaacagtttctacatcaatctaacaattctacatcaattaatcatcaatttctcactttaacc 1392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 56; Significance: 3e-23; HSPs: 4)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 21130 - 21185
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21130 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 21185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 34145 - 34200
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34145 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 34200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 13656 - 13732
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||| | ||||||    
T  13656 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatccattaattctcaatttctctcattaacc 13732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 17541 - 17465
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| |||||||||||||   |||| | | ||||| |||| |||||||||||||||||||||    
T  17541 tatctaaggtctgtaaacactttctacatcaattctacaattctgcatcagttaatcatcaatttctcactttaacc 17465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 102965 - 102867
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaa 115  Q
    ||||||||||||||||||| |||||||||||||||||| | | | |||||||||| |||||||||||||| |||| ||||||||||| ||| |||||||    
T  102965 tatctaaggtctgtaaacagtttctacatcaatctaaccattctacatcaattaatcatcaatttctcaccttaaccctaattctcccattctctaaaa 102867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 22993 - 23031
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaaca 56  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  22993 tatctaaggtctgtacacaatttctacatcaatctaaca 23031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 20585 - 20686
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  20585 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 20682  T
Q  192 ctta 195  Q
    ||||    
T  20683 ctta 20686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 14137 - 14175
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaaca 56  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  14137 tatctaaggtctgtacacagtttctacatcaatctaaca 14175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 4041 - 4241
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa--cctaattctccaattttctaaaa 115  Q
    |||||||||| |||| |||||||||||||||||  ||||  |||||  ||  ||| |||||| | |||||||| |  |||||||||| |||   ||||||    
T  4041 tatctaaggtttgtacacaatttctacatcaattcaacag-ttttccccatctaatcatcaaatcctcacttttaaccctaattctcaaatc--ctaaaa 4137  T
Q  116 cctcaacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtct 215  Q
      ||||||||||||||||||||||| |  |||||||||||||||| |||| |||||||| |||||| |||| ||||||||| ||| | ||||||| | ||    
T  4138 attcaacctacaaccatgttaaattgaatttcagaatcacatacttagaagtattgaaggttagtctcacctttaccttaggattcacgatcggcagcct 4237  T
Q  216 ctct 219  Q
    ||||    
T  4238 ctct 4241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 81071 - 81144
Alignment:
Q  21 ctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||||| |||||||||||||||| ||||    
T  81071 ctaaggtctgtaaacagtttctacatcaatctaacaactctacatcaattaatcatcaatttctcacttaaacc 81144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 117355 - 117387
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaatt 70  Q
    |||||||||||||||||||| ||||||||||||    
T  117355 tttctacatcaatctaacaatttttcatcaatt 117387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 195
Target Start/End: Complemental strand, 2641 - 2471
Alignment:
Q  26 gtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa--cctaattctccaattttctaaaacctcaacc 123  Q
    ||||||| ||| |||||||||||||  ||||  |||  ||||  ||| ||||||||  ||||||| |  |||||||||| |||| |  ||||| | ||||    
T  2641 gtctgtacacagtttctacatcaattcaacagttttctatcatctaatcatcaattcgtcacttttaaccctaattctcaaattctaaaaaactt-aacc 2543  T
Q  124 tacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||||||||||||  |||||| |||||||||||  |||||||||| ||||||||||||||||||||    
T  2542 tacaaccatgttaaattcaatttcagattcacatactcaagattattgaaggttagtcccacccttacctta 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 7436 - 7360
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||| | ||||||    
T  7436 tatctaaggtctgtaaacagtttctacatcaatctaacaacttttcatccattaatcctcaatttctctcattaacc 7360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 7355 - 7431
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||| | ||||||    
T  7355 tatctaaggtctgtaaacagtttctacatcaatctaacaacttttcatccattaatcctcaatttctctcattaacc 7431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 14735 - 14811
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||| | ||||||    
T  14735 tatctaaggtctgtaaacagtttctacatcaatctaacaacttttcatccattaatcctcaatttctctcattaacc 14811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 228212 - 228288
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||| ||||| | |||||||||| ||||||||    
T  228212 tatctaaggtctgtaaacagtgtctacatcaatctaacaacttttcatccattaatcctcaatttctccctttaacc 228288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 5062 - 5117
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5062 ttagtcccacccttaccttagtattgatgatcggcagtctctctccctcttggttc 5117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 5062 - 5117
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5062 ttagtcccacccttaccttagtattgatgatcggcagtctctctccctcttggttc 5117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 6401 - 6456
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6401 ttagtcccacccttacattagtattgatgatcggcggtctctctccctcttggttc 6456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 69872 - 69817
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  69872 ttagtcccacccttaccttagtattgatgatcggcagtctctctccctcttggttc 69817  T

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Target: scaffold0020 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 15207 - 15133
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||| | ||||||    
T  15207 tctaaggtctgtaaacagtttctacatcaatctaacaacttttcatccattaatcctcaatttctctcattaacc 15133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 11263 - 11311
Alignment:
Q  183 cacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11263 cacccttaccttagtattgatgatcggcggtctctctccctcttggttc 11311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 8817 - 8741
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||   |||||||||| | ||||||    
T  8817 tatctaaggtctgtaaacaaattctacatcaatctaacaacttttcatccattaattctcaatttctctcattaacc 8741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 14382 - 14458
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||| |   |||||||||||||||||    
T  14382 tatctaaggtctgtaaacagtttctacatcaatctaacaatttttcatcaactaatctcaaatttctcactttaacc 14458  T

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Target: scaffold0114 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 46418 - 46330
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    ||||||||| ||||||||| |||||||||||||||||||  | | |||||||||| | ||||||||||||||||| |||||||||||||    
T  46418 tatctaaggcctgtaaacagtttctacatcaatctaacagttctacatcaattaatcctcaatttctcactttaaccctaattctccaa 46330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 32689 - 32641
Alignment:
Q  33 aacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    |||| ||||||||||||||||||||||||||| |  |||| ||||||||    
T  32689 aacagtttctacatcaatctaacaacttttcaccgtttaatcatcaatt 32641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 268446 - 268522
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||| ||| |||||||||||||||||||| | | |||||||||| | |||||||||||||||||||    
T  268446 tatctaaggtctgtacacagtttctacatcaatctaacaattctacatcaattaatcctcaatttctcactttaacc 268522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 13820 - 13788
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaat 50  Q
    ||||||||||||||||||| |||||||||||||    
T  13820 tatctaaggtctgtaaacactttctacatcaat 13788  T

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Target: scaffold0632 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 1198 - 1253
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1198 ttagtcacacccttaccttagtattgataatcggcggtctctctccctcttggttc 1253  T

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Target: scaffold0320 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 12737 - 12828
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattt 108  Q
    ||||||||||||||||||| |||||||||||||||||||  | | |||||||||| | |||||||||| |||||| ||||||| ||||||||    
T  12737 tatctaaggtctgtaaacagtttctacatcaatctaacagttctacatcaattaatcctcaatttctctctttaagcctaattttccaattt 12828  T

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Target: scaffold0083 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 1970 - 2025
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  1970 ttagtcccaccctttccttagtattgatgatcggtggtctctctccctcttggttc 2025  T

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Target: scaffold0046 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 21796 - 21741
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  21796 ttagtcccatccttaccttagtattgatgatcggtggtctctctccctcttggttc 21741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 29235 - 29180
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  29235 ttagtcccactcttaccttagtattgatgatcgacggtctctctccctcttggttc 29180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 33255 - 33287
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaat 50  Q
    ||||||||||||||||||| |||||||||||||    
T  33255 tatctaaggtctgtaaacagtttctacatcaat 33287  T

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Target: scaffold0436 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 8993 - 9047
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggtt 230  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  8993 ttagtcccacccttaccttagtattgatgatcggtggtcactctccctcttggtt 9047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 177 - 307
Target Start/End: Original strand, 23568 - 23708
Alignment:
Q  177 tagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttcnnnnnnnnncttg----------ttttctccaaaaagcagtttca 266  Q
    |||||| ||||||||||||||||||||||||||| |||||| |||||||||||||         ||||          ||||||||||||||||||||||    
T  23568 tagtcctacccttaccttagtattgatgatcggcagtctctttccctcttggttctcctcttctcttgttttctccatttttctccaaaaagcagtttca 23667  T
Q  267 cgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    | || |||| ||||||||| |||||||||||||||| ||||    
T  23668 catagaaacgtttctaaacctagtttcctccttatacctct 23708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 39113 - 39212
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaaac 116  Q
    |||| |||| ||||||||| |||| ||||||||   |||| | | |||||||||| ||||||||||||||||||| |||||||||| | |||||||||||    
T  39113 tatccaaggcctgtaaacactttccacatcaattctacaattatacatcaattaatcatcaatttctcactttaaccctaattctcaacttttctaaaac 39212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2004 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold2004
Description:

Target: scaffold2004; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 231 - 155
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||| | | |||||||| | ||||||    
T  231 tatctaaggtctgtaaacagattctacatcaatctaacaacttttcatccattaatctttaatttctctcattaacc 155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 27021 - 26933
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    ||||||||||||||||||| |||||||||||||||||| | | | | |||||||| | |||||||||||||| || |||||||||||||    
T  27021 tatctaaggtctgtaaacagtttctacatcaatctaaccattctacgtcaattaatcctcaatttctcacttaaaccctaattctccaa 26933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 25650 - 25574
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||||| ||||||||||||||||||| || | |||||||||| ||| |||| ||||||| ||||    
T  25650 tatctaaggtctgtaaacagtttctacatcaatctaacatctctacatcaattaatcattaattcctcacttaaacc 25574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 32339 - 32263
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |  |||| |||||| ||||| | ||||||    
T  32339 tatctaaggtctgtgaacaatttctacatcaatctaacaacttttcaccgtttaatcatcaaattctctcattaacc 32263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 46667 - 46743
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |  |||| |||||| ||||| | ||||||    
T  46667 tatctaaggtctgtgaacaatttctacatcaatctaacaacttttcaccgtttaatcatcaaattctctcattaacc 46743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 16846 - 16891
Alignment:
Q  36 aatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||    
T  16846 aatttctacatcaatctaacaacttttcatcgtttaatcatcaatt 16891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 13929 - 13841
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    ||||||||||||||||||| |||||||||||||||||| | | | |||||||||| | |||||||||| ||| || |||||||||||||    
T  13929 tatctaaggtctgtaaacagtttctacatcaatctaaccattctacatcaattaatcctcaatttctctcttaaaccctaattctccaa 13841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 135580 - 135503
Alignment:
Q  119 caacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |||||||||||| ||||||||||| | |||||||| | | ||| ||||||| ||||| |||||||||||||||||||||    
T  135580 caacctacaacc-tgttaaattcaattttcagaattatacacttagaattagtgaaggttagtcccacccttaccttag 135503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 1326 - 1425
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaattt-ctcactttaa-cctaattctccaattttctaaaa 115  Q
    ||||||||||||   |||||||||||||||||||||||||||||||| | ||||| ||||||||| ||| |||||| |||||||||  |||| |||||||    
T  1326 tatctaaggtctaggaacaatttctacatcaatctaacaacttttcaccgattaatcatcaatttcctctctttaaccctaattctgaaattctctaaaa 1425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 16637 - 16692
Alignment:
Q  176 ttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  16637 ttagtcccaccctttgcttagtattgatgatcgtcggtctctctccctcttggttc 16692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 31110 - 31161
Alignment:
Q  145 ttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  31110 ttcagaattacatactcagaattattgaaggttagtcccacccttaccttag 31161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 1184 - 1246
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||||||||||||||||||  ||||||||| |||||| || |||||||||||    
T  1184 ttttctccaaaaagcagtttcacgtaaaaatatttctaaacctagttttcttcttatatctct 1246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 21759 - 21821
Alignment:
Q  245 ttttctccaaaaagcagtttcacgtaaaaacttttctaaacttagtttcctccttatatctct 307  Q
    ||||||||||||||||||||||||||||||  ||||||||| |||||| || |||||||||||    
T  21759 ttttctccaaaaagcagtttcacgtaaaaaagtttctaaacctagttttcttcttatatctct 21821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 231
Target Start/End: Original strand, 21597 - 21735
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || |||||   |||||||||| ||||||||| || | ||||||||||   ||| |  |||||||||  ||||||||||||||||    
T  21597 cctaattctcaaattctcaaaaactaaaacctacaac-atgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttac 21695  T
Q  192 cttagtattgatgatcggcggtctctctccctcttggttc 231  Q
    ||||| ||  |||||||||||  | |||| ||||||||||    
T  21696 cttagaatgaatgatcggcggcttttctctctcttggttc 21735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 2808 - 2906
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacctaattctccaattttctaaaac 116  Q
    |||||||||||||| ||||  ||||||||||||    ||| | | |||||||||| |||||||||||||||||||||||| |||| |||| ||||||||    
T  2808 tatctaaggtctgtgaacacattctacatcaattcttcaattctacatcaattaatcatcaatttctcactttaacctaactctcaaattatctaaaac 2906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 1247 - 1170
Alignment:
Q  119 caacctacaaccatgttaaattcatcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||||||| ||||||||||||||  || ||||| ||||||||||| |||||| || ||| |||||||||||||||||    
T  1247 caacctacagccatgttaaattcaattttagaattacatactcagagttattgcaggttactcccacccttaccttag 1170  T

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Target: scaffold0530 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 407 - 319
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||| |||||   |||||||||| | |||| ||||||| |||||    
T  407 tatctaaggtctgtaaacaaattatacatcaatctaacaacatttcatccattaattctcaatttctctcattaatcctaattttccaa 319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 5636 - 5560
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||| ||| |||||||||||||   |||| | | |||||||||| |||||||||||||||||||||    
T  5636 tatctaaggtctgtacacactttctacatcaattctacaattctacatcaattaatcatcaatttctcactttaacc 5560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 5501 - 5425
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||| |||||   |||||||||| | ||||||    
T  5501 tatctaaggtctgtaaacaaattaaacatcaatctaacaacttttcatccattaattctcaatttctctcattaacc 5425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 50923 - 50835
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    ||||||||||||||||||| ||||||||||||||||||   | | |||||||||| | |||||||||| ||| || |||||||||||||    
T  50923 tatctaaggtctgtaaacagtttctacatcaatctaaccgttctacatcaattaatcctcaatttctctcttaaaccctaattctccaa 50835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 158869 - 158821
Alignment:
Q  148 agaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  158869 agaatcatatactcagaattattgaaggttagtcccacccttaccttag 158821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 17238 - 17186
Alignment:
Q  63 catcaattaaacatcaatttctcactttaacctaattctccaattttctaaaa 115  Q
    |||||||||| | |||||||||||||| | ||||||||||||||| |||||||    
T  17238 catcaattaatcctcaatttctcacttaaccctaattctccaattctctaaaa 17186  T

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Target: scaffold1992 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1992
Description:

Target: scaffold1992; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 535 - 598
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  535 tatctaaggtctaagaacaatttctacatcaatctaacaacttttcatcgtttaatcatcaatt 598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 137 - 36
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| ||||||| ||||| | |||||||||| ||||||||| || | |||||||||||| |||||  |||||||||  ||||||||||||||||    
T  137 cctaattctcaaattttcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcacagactcaagattattgaatgttagtcccacccttac 40  T
Q  192 ctta 195  Q
    ||||    
T  39 ctta 36  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 60060 - 59985
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacct 95  Q
    ||||||| ||||||||| |||| ||||||||||||||| | | |||||||||| |  |||||||||||||||||||    
T  60060 tctaaggcctgtaaacagtttccacatcaatctaacaattctacatcaattaatccccaatttctcactttaacct 59985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 11150 - 11224
Alignment:
Q  20 tctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||||||| |||||||||||||||||| | | | |||||||||| |||||||| ||| | ||||||    
T  11150 tctaaggtctgtaaacagtttctacatcaatctaaccattctacatcaattaatcatcaattcctctcattaacc 11224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 8618 - 8695
Alignment:
Q  119 caacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |||||||||||| ||||||||||| | |||||||||| | ||| ||||||| ||||| |||||||||||||||||||||    
T  8618 caacctacaacc-tgttaaattcaattttcagaatcatacacttagaattagtgaaggttagtcccacccttaccttag 8695  T

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Target: scaffold0621 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 9291 - 9375
Alignment:
Q  22 taaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    |||||| |||||||| |||||||||||||||||  | ||| |||||||||| | |||||| ||| |||||| |||||||||||||    
T  9291 taaggtttgtaaacagtttctacatcaatctaatcattttacatcaattaatcctcaattcctctctttaaccctaattctccaa 9375  T

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Target: scaffold0476 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 8521 - 8597
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||||||| ||||| ||||||||| |||||||||| ||| |||||||||| | |||||| ||| | ||||||    
T  8521 tatctaaggtctggaaacagtttctacataaatctaacaattttacatcaattaatcctcaattcctctcattaacc 8597  T

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Target: scaffold0413 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 13386 - 13474
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaa 105  Q
    ||||||||||||||||| | |||||||||||||||||| | | | |||||||||  | |||||||||| ||| || |||||||||||||    
T  13386 tatctaaggtctgtaaatagtttctacatcaatctaaccattctacatcaattagtcttcaatttctctcttaaaccctaattctccaa 13474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 1099 - 1200
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| |||||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  1099 cctaattctcaaattctcaaaaac-tcaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 1196  T
Q  192 ctta 195  Q
    ||||    
T  1197 ctta 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 13037 - 12974
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||||||||||||||||||||||||||||||| |  |||| ||||||||    
T  13037 tatctaaggtctaggaacaatttctacatcaatctaacaacttttcaccgtttaatcatcaatt 12974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 17080 - 17143
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||| ||||||||||||||||||||||||||| || |||| ||||||||    
T  17080 tatctaaggtctaggaacagtttctacatcaatctaacaacttttcaccatttaatcatcaatt 17143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 22801 - 22700
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| |||||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  22801 cctaattctcaaattctcaaaaac-tcaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 22704  T
Q  192 ctta 195  Q
    ||||    
T  22703 ctta 22700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 438 - 376
Alignment:
Q  19 atctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    |||||||||||   |||||||||||||||||||||||||||||||| |  |||| ||||||||    
T  438 atctaaggtctaggaacaatttctacatcaatctaacaacttttcaccgtttaatcatcaatt 376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 7451 - 7549
Alignment:
Q  17 atatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctccaattttctaaa 114  Q
    |||||||||||||||||||| | ||||||||||||||| || | |||||| ||||| |   ||||| ||||| ||| |||||||||| |||| ||||||    
T  7451 atatctaaggtctgtaaacagtatctacatcaatctaataattcttcatcgattaatctcaaatttttcactataaccctaattctcaaattctctaaa 7549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 16592 - 16546
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||    
T  16592 tatctaaggtctaggaacaatttctacatcaatctaacaacttttca 16546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 167368 - 167306
Alignment:
Q  19 atctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    |||||||||||   |||||||||||||||||||||||||||||||| |  |||| ||||||||    
T  167368 atctaaggtctaggaacaatttctacatcaatctaacaacttttcaccgtttaatcatcaatt 167306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 35528 - 35463
Alignment:
Q  132 tgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||||||||| | |||||||||| ||||||||||||| | ||| ||||||||| |||||||||||    
T  35528 tgttaaattcaattttcagaatcatatactcagaattaataaaggttagtcccatccttaccttag 35463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 1102 - 1026
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    ||||||||| ||||||  | |||||||| ||||||||||  | | |||||||||| | |||||||||||||||||||    
T  1102 tatctaaggcctgtaactagtttctacaccaatctaacagttctacatcaattaatcctcaatttctcactttaacc 1026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 7192 - 7294
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  7192 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 7289  T
Q  192 cttag 196  Q
    |||||    
T  7290 cttag 7294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 3626 - 3674
Alignment:
Q  33 aacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    |||||||||||||||||||||||||||||||| |  |||| ||||||||    
T  3626 aacaatttctacatcaatctaacaacttttcaccgtttaatcatcaatt 3674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 10701 - 10733
Alignment:
Q  108 ttctaaaacctcaacctacaaccatgttaaatt 140  Q
    |||||||||||||||||||||||||||||||||    
T  10701 ttctaaaacctcaacctacaaccatgttaaatt 10733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 1083 - 995
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcacttta-acctaattctccaa 105  Q
    ||||||||||||||||| | |||||||||||||||||| | | | |||||||||| | | |||||||| ||| |  |||||||||||||    
T  1083 tatctaaggtctgtaaatagtttctacatcaatctaaccattctacatcaattaatccttaatttctctcttaatccctaattctccaa 995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 11270 - 11318
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatc 66  Q
    |||||||||| ||||||||| |||||||||||||||| ||| |||||||    
T  11270 tatctaaggtatgtaaacaaattctacatcaatctaaaaacatttcatc 11318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 3128 - 3053
Alignment:
Q  119 caacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctt 194  Q
    |||||||||||  ||||||||||| | |||||||| | | ||| ||||||||||||| |||||||||||||||||||    
T  3128 caacctacaact-tgttaaattcaattttcagaataatacacttagaattattgaaggttagtcccacccttacctt 3053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 6998 - 6897
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  6998 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 6901  T
Q  192 ctta 195  Q
    ||||    
T  6900 ctta 6897  T

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Target: scaffold0598 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 442 - 379
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||| ||||||||||||||||||||||||||| |  |||| ||||||||    
T  442 tatctaaggtctaggaacagtttctacatcaatctaacaacttttcaccgtttaatcatcaatt 379  T

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Target: scaffold0439 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 12343 - 12405
Alignment:
Q  91 aacctaattctccaattttctaaaacctcaacctacaaccatgttaaattcatcttcagaatca 154  Q
    |||||||||||| ||||| | |||||  ||||||||||||||||||||||||  ||||||||||    
T  12343 aacctaattctcaaatttcc-aaaactacaacctacaaccatgttaaattcaatttcagaatca 12405  T

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Target: scaffold0394 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 7564 - 7513
Alignment:
Q  145 ttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    |||||||||| ||||||| |||||  |||| |||||||||||||||||||||    
T  7564 ttcagaatcatatactcataattaaagaaggttagtcccacccttaccttag 7513  T

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Target: scaffold0247 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 6205 - 6142
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    ||||||||||||   |||||||||||| ||||||||||||||||||| |  |||| ||||||||    
T  6205 tatctaaggtctaggaacaatttctacgtcaatctaacaacttttcaccgtttaatcatcaatt 6142  T

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Target: scaffold0149 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 34237 - 34338
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  34237 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 34334  T
Q  192 ctta 195  Q
    ||||    
T  34335 ctta 34338  T

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Target: scaffold0064 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 47636 - 47703
Alignment:
Q  33 aacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt-tctcactttaacctaatt 99  Q
    |||| ||||||||||||||||||||||||||| |  |||| |||||||| ||||| ||| ||||||||    
T  47636 aacagtttctacatcaatctaacaacttttcaccgtttaatcatcaattctctcaatttgacctaatt 47703  T

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Target: scaffold0035 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 107216 - 107317
Alignment:
Q  93 cctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttac 191  Q
    |||||||||| |||| || ||||| | |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||    
T  107216 cctaattctcaaattctcaaaaac-taaacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttac 107313  T
Q  192 ctta 195  Q
    ||||    
T  107314 ctta 107317  T

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Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 115743 - 115818
Alignment:
Q  120 aacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||||||    
T  115743 aacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 115818  T

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Target: scaffold0627 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 662 - 692
Alignment:
Q  34 acaatttctacatcaatctaacaacttttca 64  Q
    |||||||||||||||||||||||||||||||    
T  662 acaatttctacatcaatctaacaacttttca 692  T

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Target: scaffold0555 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 9946 - 9892
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaa 72  Q
    ||||||||||||| ||||| |||||||||||||||||| | | | ||||||||||    
T  9946 tatctaaggtctgaaaacagtttctacatcaatctaaccattctacatcaattaa 9892  T

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Target: scaffold0480 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 10210 - 10248
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaaca 56  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  10210 tatctaaggtctgtacacagtttctacatcaatctaaca 10248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 13450 - 13416
Alignment:
Q  162 agaattattgaagattagtcccacccttaccttag 196  Q
    ||||||||||||| |||||||||||||||||||||    
T  13450 agaattattgaaggttagtcccacccttaccttag 13416  T

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Target: scaffold0352 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 17383 - 17337
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttca 64  Q
    ||||||||||||   ||||||||||||||||||||||||| ||||||    
T  17383 tatctaaggtctaggaacaatttctacatcaatctaacaatttttca 17337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 785 - 815
Alignment:
Q  34 acaatttctacatcaatctaacaacttttca 64  Q
    |||||||||||||||||||||||||||||||    
T  785 acaatttctacatcaatctaacaacttttca 815  T

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Target: scaffold0347; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 9676 - 9708
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaat 50  Q
    ||||||||||||||||||| |||||||||||||    
T  9676 tatctaaggtctgtaaacactttctacatcaat 9708  T

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Target: scaffold0121 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Complemental strand, 7895 - 7865
Alignment:
Q  34 acaatttctacatcaatctaacaacttttca 64  Q
    |||||||||||||||||||||||||||||||    
T  7895 acaatttctacatcaatctaacaacttttca 7865  T

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Target: scaffold0106 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 2038 - 2100
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaattaaacatcaattt-ctcactttaacctaatt 99  Q
    ||||||||||||||||||||||||||| || |||| ||| ||||| |||| ||| ||||||||    
T  2038 tttctacatcaatctaacaacttttcaccatttaatcatgaatttactcaatttgacctaatt 2100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 8015 - 8077
Alignment:
Q  38 tttctacatcaatctaacaacttttcatcaattaaacatcaattt-ctcactttaacctaatt 99  Q
    ||||||||||||||||||||||||||| || |||| ||| ||||| |||| ||| ||||||||    
T  8015 tttctacatcaatctaacaacttttcaccatttaatcatgaatttactcaatttgacctaatt 8077  T

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Target: scaffold1419 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 832 - 917
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaa-cctaattctc 102  Q
    ||||||||||||||| | | ||||||||| |||   |||  |||||||||||||| ||||||||  ||||||||| ||||||||||    
T  832 tatctaaggtctgtacaaagtttctacataaattctacagtttttcatcaattaatcatcaattcttcactttaaccctaattctc 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 2124 - 2021
Alignment:
Q  91 aacctaattctccaattttctaaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccaccctt 189  Q
    |||||||||| |||| |||| |||||  ||||||||||| |||||||||||| | |||| ||||| | ||| ||||||| ||||| ||| ||||||||||    
T  2124 aacctaattc-ccaaatttccaaaactacaacctacaac-atgttaaattcaattttcaaaatcatacacttagaattagtgaaggttaatcccaccctt 2027  T
Q  190 acctta 195  Q
    | ||||    
T  2026 agctta 2021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 13409 - 13493
Alignment:
Q  112 aaaacctcaacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||| ||||||||||||  ||||||||||| | |||||||||| ||||| ||||| ||| ||| |||||| || |||||||||||    
T  13409 aaaacttcaacctacaact-tgttaaattcaattttcagaatcatatactgagaatgattaaaggttagtcacatccttaccttag 13493  T

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Target: scaffold0251 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 20161 - 20085
Alignment:
Q  120 aacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttaccttag 196  Q
    ||||||||||| ||||||||||| | |||||||| | | ||| ||||||| ||||| |||||||| ||||||||||||    
T  20161 aacctacaacc-tgttaaattcaattttcagaattatacacttagaattagtgaaggttagtcccgcccttaccttag 20085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 339329 - 339284
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaatctaacaacttttc 63  Q
    ||||||||||||   |||| ||||||||||||||||||||||||||    
T  339329 tatctaaggtctaggaacagtttctacatcaatctaacaacttttc 339284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 1779 - 1747
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaat 50  Q
    ||||||||||||||||||| |||||||||||||    
T  1779 tatctaaggtctgtaaacactttctacatcaat 1747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 9801 - 9753
Alignment:
Q  33 aacaatttctacatcaatctaacaacttttcatcaattaaacatcaatt 81  Q
    |||| ||||||||||||||||||||||||||| |  |||| ||||||||    
T  9801 aacagtttctacatcaatctaacaacttttcaccgtttaatcatcaatt 9753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 18704 - 18779
Alignment:
Q  120 aacctacaaccatgttaaattca-tcttcagaatcacatactcagaattattgaagattagtcccacccttacctta 195  Q
    |||||||||| ||||||||| || | |||||||||| | |||||  |||||||||  ||||||||||||||||||||    
T  18704 aacctacaac-atgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 18779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 25442 - 25398
Alignment:
Q  19 atctaaggtctgtaaacaatttctacatcaatctaacaacttttc 63  Q
    |||||||||||   |||| ||||||||||||||||||||||||||    
T  25442 atctaaggtctaggaacagtttctacatcaatctaacaacttttc 25398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 47824 - 47764
Alignment:
Q  34 acaatttctacatcaatctaacaacttttcatcaattaaacatcaatttctcactttaacc 94  Q
    |||||||||||||||||||||||  |||||| |  |||| |||||||||||| | ||||||    
T  47824 acaatttctacatcaatctaacatgttttcaccgtttaatcatcaatttctctcattaacc 47764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 21620 - 21648
Alignment:
Q  33 aacaatttctacatcaatctaacaacttt 61  Q
    |||||||||||||||||||||||||||||    
T  21620 aacaatttctacatcaatctaacaacttt 21648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 22699 - 22731
Alignment:
Q  18 tatctaaggtctgtaaacaatttctacatcaat 50  Q
    ||||||||||||||||||| |||||||||||||    
T  22699 tatctaaggtctgtaaacactttctacatcaat 22731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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