View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3726_low_84 (Length: 298)
Name: NF3726_low_84
Description: NF3726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3726_low_84 |
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Alignment Details
Target: chr3 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 22 - 292
Target Start/End: Original strand, 42086842 - 42087112
Alignment:
| Q |
22 |
ggtctaacataccacatggatcaacattgtaccatttttcaagtgttgttgtcaagggaatttctgcatgatcatcatttcttaaaagttgatttcctct |
121 |
Q |
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| T |
42086842 |
ggtctaacataccacatggatcaacattgtaccatttttcaagtgttgttgtcaagggaatttctgcatgatcatcatttcttaaaagttgatttcctct |
42086941 |
T |
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| Q |
122 |
gtcctcaactttctctgtccatgttgtgcttctttcattttgatcatctgaataaattaccactttatcctccaaaccctcatttgaaaaccttggcttt |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
42086942 |
gtcctcaactttctctgtccatgttgtgcttctttcattttgatcatctgaataaattaccactttatcctccaaaccctcatttgaaaacctttgcttt |
42087041 |
T |
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| Q |
222 |
gtttcttcaaacctgctattgttgtatccatttcctgaaccaccatcttctgtgctattttcctttgcttc |
292 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
42087042 |
gtttcttcaaacctgctattgttgtatccatttcttgaaccaccatcttctgtgctattttcctttgcttc |
42087112 |
T |
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