View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3726_low_92 (Length: 280)
Name: NF3726_low_92
Description: NF3726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3726_low_92 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 20 - 279
Target Start/End: Complemental strand, 6595533 - 6595273
Alignment:
| Q |
20 |
tcagctaccctttcatttcttcaatgtctagaaataagttacaacctcgttgaacaccttgtatcttcttaggatatccatcaaatcttagaggacacaa |
119 |
Q |
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|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |
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| T |
6595533 |
tcagctaccctttcatttcttcaacctttagaaataagttacaacctcgttgaacaccttatatcttcttaggatatccatcaaatcatagaggacataa |
6595434 |
T |
|
| Q |
120 |
acgttataagtaatctagccgtaaaatatttattttccgacatgttatttttgaagaaaatacattccttttgact-attcaaatgttcctacaacggtt |
218 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
6595433 |
acgttacaagtaatctagccgtaaaatatttattttccgacatgttatttttgaagaaaatacattccttttgactaattcaaatgttcctacaacggtt |
6595334 |
T |
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| Q |
219 |
ggttataattttttggataatgatacacccttccttccatcccaaacctatgctactccac |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
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| T |
6595333 |
ggttataattttttggataatgatacacccttccttccatcccaaacctataccactccac |
6595273 |
T |
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