View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3727-Insertion-15 (Length: 365)
Name: NF3727-Insertion-15
Description: NF3727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3727-Insertion-15 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 8 - 365
Target Start/End: Complemental strand, 35424741 - 35424384
Alignment:
| Q |
8 |
ctaacgtgttgcttaatcactctcccaaatctctcagttgatcaatgcaacaagttaattggaggaatgatatgagatacaacaatcagtttctgtacaa |
107 |
Q |
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| T |
35424741 |
ctaacgtgttgcttaatcactctcccaaatctctcagttgatcaatgaaacaagttaattggaggaatgatatgagatacaacaatcagtttctgtacaa |
35424642 |
T |
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| Q |
108 |
attaagggaatataatcaataagatcatggaacgtttgttggatatcataacacaaacggtatgaaagaggaagaggccatcacatgatacnnnnnnnct |
207 |
Q |
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| T |
35424641 |
attaagggaatataatcaataagatcatggaacatttgttggatatcataacacaaacggtatgaaagaggaagaggccatcacatgatacaaaaaaact |
35424542 |
T |
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| Q |
208 |
aatgtaatggtgaaatttgttaatattctctatccttgtcatcattaatctgtcatattattatgttctattgtcatttgccacatttgtcacactcaaa |
307 |
Q |
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| T |
35424541 |
aatgtaatggtgaaatttgttaatattctctatccttgtcatcattaatctgtcatattattatattctattgtcatttgccacatttgtcacactcaaa |
35424442 |
T |
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| Q |
308 |
acaaatccataattctaacatggtccttcctttccactgttaatcttggctataatta |
365 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35424441 |
acaaatccataattctaacatggtccttcctttccactgttaatcttggctataatta |
35424384 |
T |
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